Pregenerated sensors for LRFN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030600Ensembl transcript IDs: ENSMUST00000055110.11, ENSMUST00000108288.9, ENSMUST00000189877.7, ENSMUST00000190954.7
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCGCGCGTCCCTTCTCTCCAGCCTCCCCTGCATCCGGCCGGGCTaGGCAACTAAGTGCGGCCCACAGGCGTCCCGGTGCCCGTGCGCC | + |
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Preference number: 1 (lower is better) Translates to: PRASLLSSLPCIRPG*ATKCGPQASRCPCA Trigger: GGCGCACGGGCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCAGGGGAGGCTGGAGAGAAGGGACGCGCGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR GCA 90 bp | GGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTaGCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACA | + |
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Preference number: 1 (lower is better) Translates to: GRRKVERRVWSFCGT*PEDGEDRESGKTRT Trigger: TGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAAGGACGGGGCAGAGGGGTaGAGTCGGAGAGGCCGGCGA | + |
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Preference number: 2 (lower is better) Translates to: EALEAAAGQKRSSPARYKDGAEG*SRRGRR Trigger: TCGCCGGCCTCTCCGACTCCACCCCTCTGCCCCGTC...CTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACGGGGACTGGAGGCTTTaGAGGCCGCCGCGGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: VGPARKMVRTGNRERHGHGDWRL*RPPRGR Trigger: TCTGCCCCGCGGCGGCCTCCAAAGCCTCCAGTCCCC...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGAGCCAGATACAAGGAATaGGCCCCTCGCCCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: GAKEGREKSLVLLWDLPGARYKE*APRPCP Trigger: GGGGCAGGGGCGAGGGGCCCATTCCTTGTATCTGGC...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR GCA 72 bp | AGCCTCCCCTGCATCCGGCCGGGCTGGGCAACTAAGTaGGGCCCACAGGCGTCCCGGTGCCCGTGCGCCCGT | + |
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Preference number: 3 (lower is better) Translates to: SLPCIRPGWATK*GPQASRCPCAR Trigger: ACGGGCGCACGGGCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCAGGGGAGGCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR GCA 72 bp | CCCGCCCCTCGCGCGTCCCTTCTCTCCAGCCTCCCCTaGATCCGGCCGGGCTGGGCAACTAAGTGCGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: PAPRASLLSSLP*IRPGWATKCGP Trigger: TGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCAGGGGAGGCTGGAGAGAAGGGACGCGCGAGGGGCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR CCA 72 bp | TCCCTTCTCTCCAGCCTCCCCTGCATCCGGCCGGGCTaGGCAACTAAGTGCGGCCCACAGGCGTCCCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: SLLSSLPCIRPG*ATKCGPQASRC Trigger: GCACCGGGACGCCTGTGGGCCGCACTTAGTTGCCCAGCCCGGCCGGATGCAGGGGAGGCTGGAGAGAAGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGAAGGGGACTGGAGGCTTaGGAGGCCGCCGCGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SVGPARKMVRTGNRERHGRGLEA*EAAAGQ Trigger: CTGCCCCGCGGCGGCCTCCAAAGCCTCCAGTCCCCT...TCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| 3UTR GCA 72 bp | AAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTaGCCGGAAGATGGTGAGGACAGGGAATCGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: KVERRVWSFCGT*PEDGEDRESGK Trigger: CTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | TCGGAGAGGCCGGCGACCTGCCACCAATCCCGAGGCGGCCGGCCCCGCCCCTCGGCCCGGCCCCCTGCTTaGCGTGTGATGAGCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SERPATCHQSRGGRPRPSARPPA*RVMSGG Trigger: GCCCCCGCTCATCACACGGCAAGCAGGGGGCCGGGC...CGAGGGGCGGGGCCGGCCGCCTCGGGATTGGTGGCAGGTCGCCGGCCTCTCCGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR TCA 90 bp | CTTCGCTGTGTAAGGCACCGGCTCCGGCGAGGTCCGCGAGCGCGCGGGGGACGGGAGAGCACACGTGGCTaGCCCGAGGGGGCGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LRCVRHRLRRGPRARGGRESTRG*PEGASW Trigger: CCAGGACGCCCCCTCGGGTCAGCCACGTGTGCTCTC...CCGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | CTTCGCTGTGTAAGGCACCGGCTCCGGCGAGGTCCGCGAGCGCGCGGGGGACGGCAGGGCCCGGCCCCCTaGTTGCCGTGTGATGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: LRCVRHRLRRGPRARGGRQGPAP*LPCDER Trigger: CCGCTCATCACACGGCAAGCAGGGGGCCGGGCCCTG...CCGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GCTTCGCTGTGTAAGGCACCGGCTCCGGCGAGGTCCGCGAGCGCGCGGGGGACGATGGGGTGGGTGGCTTaGGCCCACCGCCCTGGGACC | + |
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Preference number: 4 (lower is better) Translates to: ASLCKAPAPARSASARGTMGWVA*AHRPGT Trigger: GGTCCCAGGGCGGTGGGCCCAAGCCACCCACCCCAT...CGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GCTTCGCTGTGTAAGGCACCGGCTCCGGCGAGGTCCGCGAGCGCGCGGGGGACGGGACCCGAGTCCGGCTaGAGTTCCCCAGCAGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: ASLCKAPAPARSASARGTGPESG*SSPAAV Trigger: GACGGCTGCTGGGGAACTCCAGCCGGACTCGGGTCC...CGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR TCA 90 bp | TCGGAGAGGCCGGCGACCTGCCACCAATCCCGAGGCGGCCGGCCCCGCCCCTCGAGAAATAGCGGTCAGTaGGATGCTCGGGCGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: SERPATCHQSRGGRPRPSRNSGQ*DARAWH Trigger: GTGCCACGCCCGAGCATCTCACTGACCGCTATTTCT...CGAGGGGCGGGGCCGGCCGCCTCGGGATTGGTGGCAGGTCGCCGGCCTCTCCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | TCGGAGAGGCCGGCGACCTGCCACCAATCCCGAGGCGGCCGGCCCCGCCCCTCGCAGCAGCCACAAGCCTaGGCTCACTGGTTGAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: SERPATCHQSRGGRPRPSQQPQA*AHWLSR Trigger: ACGACTCAACCAGTGAGCGCAGGCTTGTGGCTGCTG...CGAGGGGCGGGGCCGGCCGCCTCGGGATTGGTGGCAGGTCGCCGGCCTCTCCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | TCGGAGAGGCCGGCGACCTGCCACCAATCCCGAGGCGGCCGGCCCCGCCCCTCGTGGGGGCGCCATCAGTaGCAGAGGTACCACACATAC | + |
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Preference number: 4 (lower is better) Translates to: SERPATCHQSRGGRPRPSWGRHQ*QRYHTY Trigger: GTATGTGTGGTACCTCTGCCACTGATGGCGCCCCCA...CGAGGGGCGGGGCCGGCCGCCTCGGGATTGGTGGCAGGTCGCCGGCCTCTCCGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR TCA 90 bp | CTTCGCTGTGTAAGGCACCGGCTCCGGCGAGGTCCGCGAGCGCGCGGGGGACGGTTCAAGTTCACCATCTaGCCCACCGCCTCCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: LRCVRHRLRRGPRARGGRFKFTI*PTASHG Trigger: GCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAA...CCGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | AGCCCCTCCCTCCAAACCAGACTGGTGGGACCAGGGATGGGGCTGAGTGAGGGGCCAGGCACTGGCCTCTaGGCCGGCCAGCGGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSLQTRLVGPGMGLSEGPGTGL*AGQRMS Trigger: GCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGG...CCCCTCACTCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | GCTTCGCTGTGTAAGGCACCGGCTCCGGCGAGGTCCGCGAGCGCGCGGGGGACGGAAGGCGTCAAAGGCTaGCGACTCCACCTTACGGAT | + |
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Preference number: 4 (lower is better) Translates to: ASLCKAPAPARSASARGTEGVKG*RLHLTD Trigger: ATCCGTAAGGTGGAGTCGGCAGCCTTTGACGCCTTC...CGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGAGCGGTCTGGAGCTGGTaGGGCGGAGGCCTGCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: GAKEGREKSLVLLWDLPGAVWSW*GGGLLR Trigger: GCGCAGCAGGCCTCCGCCCCACCAGCTCCAGACCGC...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR TCA 90 bp | GAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAAGCCCAAGCCCCGGAGCTaGTCCCCTCGCACCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: EALEAAAGQKRSSPARYKPKPRS*SPRTSA Trigger: GGCAGAGGTGCGAGGGGATCAGCTCCGGGGCTTGGG...CTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | TCGGAGAGGCCGGCGACCTGCCACCAATCCCGAGGCGGCCGGCCCCGCCCCTCGATTTATGTAGACGGTTaGAGGTCATGTCCAAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SERPATCHQSRGGRPRPSIYVDG*RSCPSA Trigger: TGCGCTTGGACATGACCTCCAACCGTCTACATAAAT...CGAGGGGCGGGGCCGGCCGCCTCGGGATTGGTGGCAGGTCGCCGGCCTCTCCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTGACGGATGCCAGGCACTaGCCTCTGGGCCGGCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: GTCPEDGEDRESGKTRTLTDARH*PLGRPA Trigger: CGCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGT...CAGTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTGTGTGGCGTGGACCGGTaGCGCTTTGTCCGCCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GTCPEDGEDRESGKTRTLCGVDR*RFVRRA Trigger: CGCCCGGCGGACAAAGCGCCACCGGTCCACGCCACA...CAGTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTGGGCCCCGTCCAGGTGTaGCGTGGACCGGTGGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: GTCPEDGEDRESGKTRTLGPVQV*RGPVAL Trigger: AAGCGCCACCGGTCCACGCCACACCTGGACGGGGCC...CAGTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GACTGGAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATCGCAGACTGACAGCCTaGCCCTCTACCACCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DWRLWRPPRGRRDLVQPDRRLTA*PSTTRA Trigger: GGCCCTGGTGGTAGAGGGCCAGGCTGTCAGTCTGCG...ATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACCCTCAGCGGGCGGCATaGTGCAGGATCTCCCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: VGPARKMVRTGNRERHGHPQRAA*CRISRG Trigger: ACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGG...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | TGTGGCGGAGGGTCCCGGCTCCGAGAAGGGGATTTGGTTTTTGTTTGTGTGGGGCGGTTGCTGTCAAGGTaGAGGGCCCGGAGAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: CGGGSRLREGDLVFVCVGRLLSR*RARRAR Trigger: CCGGGCTCTCCGGGCCCTGCACCTTGACAGCAACCG...CCCCACACAAACAAAAACCAAATCCCCTTCTCGGAGCCGGGACCCTCCGCCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | TCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACGACCAGGGCAGGGCTaGCCTCGAGATGCTCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SVGPARKMVRTGNRERHGRPGQG*PRDAPA Trigger: GGCAGGAGCATCTCGAGGCCAGCCCTGCCCTGGTCG...TCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | TTCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGCGTCAATGGGGTGGGTaGCTTGGGCCCACCGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: FCGTCPEDGEDRESGKTRRQWGG*LGPTAL Trigger: CAGGGCGGTGGGCCCAAGCCACCCACCCCATTGACG...CCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GACTGGAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATGAAGCTGACCGTCAATaGGGTGGGTGGCTTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: DWRLWRPPRGRRDLVQPDEADRQ*GGWLGP Trigger: GGGCCCAAGCCACCCACCCCATTGACGGTCAGCTTC...ATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACGTGCCGCCCAAGAAATaGGCCCTCAGCGGGCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VGPARKMVRTGNRERHGHVPPKK*ALSGRH Trigger: ATGCCGCCCGCTGAGGGCCCATTTCTTGGGCGGCAC...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAAGGCGCACCTGCGCCGTTaGTCTGAGAGCACACGTGGC | + |
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Preference number: 4 (lower is better) Translates to: EALEAAAGQKRSSPARYKAHLRR*SESTRG Trigger: GCCACGTGTGCTCTCAGACCAACGGCGCAGGTGCGC...CTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGATCGCCTCGGCCTCCATaGCCTTTGCCTCGATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GAKEGREKSLVLLWDLPGSPRPP*PLPRWP Trigger: CGGCCATCGAGGCAAAGGCCATGGAGGCCGAGGCGA...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACCGTCCAGGTGTGGCGTaGACCGGTGGCGCTTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: VGPARKMVRTGNRERHGHRPGVA*TGGALS Trigger: GGACAAAGCGCCACCGGTCCACGCCACACCTGGACG...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR TCA 90 bp | CCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAAGGAATGGGCCCCTCTGTTGCGAGACAGGGTaGGGTGGACCAGGCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PPRGRRDLVQPDTRNGPLCCETG*GGPGWS Trigger: TGACCAGCCTGGTCCACCTCACCCTGTCTCGCAACA...GAGGGGCCCATTCCTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | GGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTGTCAGGTGCCACCCAATaGACCACGGGCTCGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GTCPEDGEDRESGKTRTLSGATQ*TTGSGS Trigger: TGACCCCGAGCCCGTGGTGCATTGGGTGGCACCTGA...CAGTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | GACTGGAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATCGTTGGCACCAGGTCTaGCTGGTGTGGCGATGTCAG | + |
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Preference number: 4 (lower is better) Translates to: DWRLWRPPRGRRDLVQPDRWHQV*LVWRCQ Trigger: CTGACATCGCCACACCAGGCAGACCTGGTGCCAACG...ATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | CCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAAGGAATGGGCCCCTCACCCACCGCCTCCCATaGCAGTGCCTCCAGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: PPRGRRDLVQPDTRNGPLTHRLP*QCLQVV Trigger: AACAACCTGGAGGCACTGCCATGGGAGGCGGTGGGT...GAGGGGCCCATTCCTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGATGGCCTTTGCCTCGATaGCCGCAGGGACAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: GAKEGREKSLVLLWDLPGWPLPR*PQGQPP Trigger: AGGTGGCTGTCCCTGCGGCCATCGAGGCAAAGGCCA...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | TGTGGCGGAGGGTCCCGGCTCCGAGAAGGGGATTTGGTTTTTGTTTGTGTGGGGGCAAGCACAGCGAGGTaGCGGAGCCACCCAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: CGGGSRLREGDLVFVCVGASTAR*RSHPES Trigger: GCTCTCTGGGTGGCTCCGCCACCTCGCTGTGCTTGC...CCCCACACAAACAAAAACCAAATCCCCTTCTCGGAGCCGGGACCCTCCGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR TCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGAGTAGGTGCCACGTTCTaGCAGATGCAGCGACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GAKEGREKSLVLLWDLPGVGATF*QMQRPG Trigger: CCCTGGTCGCTGCATCTGTCAGAACGTGGCACCTAC...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | GGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTGATCCCCTCGCACCTCTaGCAGGCGGTTGCTGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: GTCPEDGEDRESGKTRTLIPSHL*QAVAVK Trigger: CTTGACAGCAACCGCCTGGCAGAGGTGCGAGGGGAT...CAGTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | GGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTGACATACCTCCACAGGTaGTGTGGCTTCCCCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GTCPEDGEDRESGKTRTLTYLHR*CGFPRS Trigger: GCTGCGGGGGAAGCCACAGCACCTGTGGAGGTATGT...CAGTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR GCA 90 bp | GGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTGCCCGCGGTGGTGAATTaGACACAGCCCACCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTCPEDGEDRESGKTRTLPAVVN*TQPTTL Trigger: CAGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGG...CAGTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACGGGAAGAGCAGCAGGTaGTGGCGAAAAGAGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGPARKMVRTGNRERHGHGKSSR*WRKEPG Trigger: TCCGGGCTCTTTTCGCCACCACCTGCTGCTCTTCCC...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | TGTGGCGGAGGGTCCCGGCTCCGAGAAGGGGATTTGGTTTTTGTTTGTGTGGGGCCTGTCGATGGCGGGTaGCACAAAGAGCAGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CGGGSRLREGDLVFVCVGPVDGG*HKEQAR Trigger: ACGGGCCTGCTCTTTGTGCCACCCGCCATCGACAGG...CCCCACACAAACAAAAACCAAATCCCCTTCTCGGAGCCGGGACCCTCCGCCACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACCCAGGTCCTCCACGGTaGACAGGAAGGCGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPARKMVRTGNRERHGHPGPPR*TGRRQR Trigger: CCTTTGACGCCTTCCTGTCCACCGTGGAGGACCTGG...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGACCACCTCTAGCTCAGTaGAAGTCGCCTCGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GAKEGREKSLVLLWDLPGPPLAQ*KSPRPP Trigger: TGGAGGCCGAGGCGACTTCCACTGAGCTAGAGGTGG...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR TCA 90 bp | GACTGGAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATGGTTGTGGTCCAGCGTaGGGGTGTTCAAGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DWRLWRPPRGRRDLVQPDGCGPA*GCSSSP Trigger: TGGTGAACTTGAACACCCTCACGCTGGACCACAACC...ATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACCACGTTCTGACAGATaGAGCGACCAGGGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVGPARKMVRTGNRERHGPRSDR*SDQGRA Trigger: AGCCCTGCCCTGGTCGCTGCATCTGTCAGAACGTGG...TCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGCCACACGCCTGTCGATaGCGGGTGGCACAAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FCGTCPEDGEDRESGKTRPHACR*RVAQRA Trigger: TGCTCTTTGTGCCACCCGCCATCGACAGGCGTGTGG...CCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | CCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAAGGAATGGGCCCCTCCCAGGCTGGTCATATTaGCGAAGTCTCGACGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPRGRRDLVQPDTRNGPLPGWSY*RSLDDA Trigger: TGCGTCGTCGAGACTTCGCCAATATGACCAGCCTGG...GAGGGGCCCATTCCTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTTGCCGAGGATCAAGTaGCGGAGGTTACCCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGPARKMVRTGNRERHGHLPRIK*RRLPKP Trigger: GGGCTTGGGTAACCTCCGCCACTTGATCCTCGGCAA...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGAGGCACCAGGTCTGCCTaGTGTGGCGATGTCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GAKEGREKSLVLLWDLPGGTRSA*CGDVRR Trigger: TCTTCTGACATCGCCACACCAGGCAGACCTGGTGCC...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGACACTGGTTGAGTCGTTaGCACCAGGTCTGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAKEGREKSLVLLWDLPGHWLSR*HQVCLV Trigger: CACCAGGCAGACCTGGTGCCAACGACTCAACCAGTG...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACGCAGCTGCACGAAGGTaGCCTCCGCAATGTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGPARKMVRTGNRERHGHAAARR*PPQCDQ Trigger: TTGATCACATTGCGGAGGGCACCTTCGTGCAGCTGC...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTCCCTCCAAACCAGACTGGTGGGACCAGGGATGGGGCTGAGTGAGGGGCTGTTGTATTGCACTTaGTACATACGGATGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPSLQTRLVGPGMGLSEGLLYCT*YIRMPG Trigger: GCCTGGCATCCGTATGTACCAAGTGCAATACAACAG...CCCCTCACTCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR TCA 90 bp | TGTGGCGGAGGGTCCCGGCTCCGAGAAGGGGATTTGGTTTTTGTTTGTGTGGGGGTGCCCTCCGCAATGTaGTCAATGAGGTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGGGSRLREGDLVFVCVGVPSAM*SMRLWS Trigger: GGACCACAACCTCATTGATCACATTGCGGAGGGCAC...CCCCACACAAACAAAAACCAAATCCCCTTCTCGGAGCCGGGACCCTCCGCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGGCCTCGAGATGCTCCTaGCCAGAGCAACAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FCGTCPEDGEDRESGKTRASRCS*PEQQQK Trigger: TTTCTGCTGTTGCTCTGGGCAGGAGCATCTCGAGGC...CCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTCCCTCCAAACCAGACTGGTGGGACCAGGGATGGGGCTGAGTGAGGGGCCCGTCGTCATAGACTaGCAACACACACAAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: SPSLQTRLVGPGMGLSEGPVVID*QHTQII Trigger: TATGATTTGTGTGTGTTGGCAGTCTATGACGACGGG...CCCCTCACTCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR GCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCCAGGGCCCGGCCCCCTaGTTGCCGTGTGATGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPQGPAP*LPCDER Trigger: CCGCTCATCACACGGCAAGCAGGGGGCCGGGCCCTG...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGCCAGGCACTGGCCTCTaGGCCGGCCAGCGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRPGTGL*AGQRMS Trigger: GCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGG...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCACGGATGCCAGGCACTaGCCTCTGGGCCGGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPTDARH*PLGRPA Trigger: CGCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGT...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGCGACCAGGGCAGGGCTaGCCTCGAGATGCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRRPGQG*PRDAPA Trigger: GGCAGGAGCATCTCGAGGCCAGCCCTGCCCTGGTCG...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCCGTCAATGGGGTGGGTaGCTTGGGCCCACCGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPRQWGG*LGPTAL Trigger: CAGGGCGGTGGGCCCAAGCCACCCACCCCATTGACG...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCGGACCCGAGTCCGGCTaGAGTTCCCCAGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPGPESG*SSPAAV Trigger: GACGGCTGCTGGGGAACTCCAGCCGGACTCGGGTCC...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR GCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTGCCCGGCCCCCTGCTTaGCGTGTGATGAGCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFARPPA*RVMSGG Trigger: GCCCCCGCTCATCACACGGCAAGCAGGGGGCCGGGC...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCCGCAGACTGACAGCCTaGCCCTCTACCACCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPRRLTA*PSTTRA Trigger: GGCCCTGGTGGTAGAGGGCCAGGCTGTCAGTCTGCG...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR GCA 90 bp | TTCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGGCAGAGCTGTTGTATTaGACTTGGTACATACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FCGTCPEDGEDRESGKTRAELLY*TWYIRM Trigger: CATCCGTATGTACCAAGTGCAATACAACAGCTCTGC...CCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTATGGGGTGGGTGGCTTaGGCCCACCGCCCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFMGWVA*AHRPGT Trigger: GGTCCCAGGGCGGTGGGCCCAAGCCACCCACCCCAT...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGGAAGCTGACCGTCAATaGGGTGGGTGGCTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPREADRQ*GGWLGP Trigger: GGGCCCAAGCCACCCACCCCATTGACGGTCAGCTTC...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR TCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCGTAGGTGCCACGTTCTaGCAGATGCAGCGACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPVGATF*QMQRPG Trigger: CCCTGGTCGCTGCATCTGTCAGAACGTGGCACCTAC...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR TCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGTGTTGCGAGACAGGGTaGGGTGGACCAGGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRCCETG*GGPGWS Trigger: TGACCAGCCTGGTCCACCTCACCCTGTCTCGCAACA...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR GCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGCCACGTTCTGACAGATaGAGCGACCAGGGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRPRSDR*SDQGRA Trigger: AGCCCTGCCCTGGTCGCTGCATCTGTCAGAACGTGG...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR GCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCATCCCCTCGCACCTCTaGCAGGCGGTTGCTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPIPSHL*QAVAVK Trigger: CTTGACAGCAACCGCCTGGCAGAGGTGCGAGGGGAT...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR GCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCCGTTGGCACCAGGTCTaGCTGGTGTGGCGATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPRWHQV*LVWRCQ Trigger: CTGACATCGCCACACCAGGCAGACCTGGTGCCAACG...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCCCACACGCCTGTCGATaGCGGGTGGCACAAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPPHACR*RVAQRA Trigger: TGCTCTTTGTGCCACCCGCCATCGACAGGCGTGTGG...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCCCAGGTCCTCCACGGTaGACAGGAAGGCGTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPPGPPR*TGRRQR Trigger: CCTTTGACGCCTTCCTGTCCACCGTGGAGGACCTGG...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGACCCACCGCCTCCCATaGCAGTGCCTCCAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRTHRLP*QCLQVV Trigger: AACAACCTGGAGGCACTGCCATGGGAGGCGGTGGGT...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR TCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGTTCAAGTTCACCATCTaGCCCACCGCCTCCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRFKFTI*PTASHG Trigger: GCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAA...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR TCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGAGAAATAGCGGTCAGTaGGATGCTCGGGCGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRRNSGQ*DARAWH Trigger: GTGCCACGCCCGAGCATCTCACTGACCGCTATTTCT...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGCAGCAGCCACAAGCCTaGGCTCACTGGTTGAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRQQPQA*AHWLSR Trigger: ACGACTCAACCAGTGAGCGCAGGCTTGTGGCTGCTG...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCCACTGGTTGAGTCGTTaGCACCAGGTCTGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPHWLSR*HQVCLV Trigger: CACCAGGCAGACCTGGTGCCAACGACTCAACCAGTG...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR TCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGGGTTGTGGTCCAGCGTaGGGGTGTTCAAGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRGCGPA*GCSSSP Trigger: TGGTGAACTTGAACACCCTCACGCTGGACCACAACC...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR TCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGGTGCCCTCCGCAATGTaGTCAATGAGGTTGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRVPSAM*SMRLWS Trigger: GGACCACAACCTCATTGATCACATTGCGGAGGGCAC...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGGCCTCGAGATGCTCCTaGCCAGAGCAACAGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRASRCS*PEQQQK Trigger: TTTCTGCTGTTGCTCTGGGCAGGAGCATCTCGAGGC...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR GCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCGAAGGCGTCAAAGGCTaGCGACTCCACCTTACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPEGVKG*RLHLTD Trigger: ATCCGTAAGGTGGAGTCGGCAGCCTTTGACGCCTTC...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTTCAGGTGCCACCCAATaGACCACGGGCTCGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFSGATQ*TTGSGS Trigger: TGACCCCGAGCCCGTGGTGCATTGGGTGGCACCTGA...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR TCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAAGCAAGCGGCACTCTaGTTTCAAGGCCATCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPKQAAL*FQGHPG Trigger: ACCAGGATGGCCTTGAAATCAGAGTGCCGCTTGCTT...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR GCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTACATACCTCCACAGGTaGTGTGGCTTCCCCCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFTYLHR*CGFPRS Trigger: GCTGCGGGGGAAGCCACAGCACCTGTGGAGGTATGT...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTGGGAAGAGCAGCAGGTaGTGGCGAAAAGAGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFGKSSR*WRKEPG Trigger: TCCGGGCTCTTTTCGCCACCACCTGCTGCTCTTCCC...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTTTGCCGAGGATCAAGTaGCGGAGGTTACCCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFLPRIK*RRLPKP Trigger: GGGCTTGGGTAACCTCCGCCACTTGATCCTCGGCAA...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTTGGGGGCGCCATCAGTaGCAGAGGTACCACACATAC | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFWGRHQ*QRYHTY Trigger: GTATGTGTGGTACCTCTGCCACTGATGGCGCCCCCA...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTGGCACCAGGTCTGCCTaGTGTGGCGATGTCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFGTRSA*CGDVRR Trigger: TCTTCTGACATCGCCACACCAGGCAGACCTGGTGCC...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTGCAGCTGCACGAAGGTaGCCTCCGCAATGTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFAAARR*PPQCDQ Trigger: TTGATCACATTGCGGAGGGCACCTTCGTGCAGCTGC...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCAGGCTGGTCATATTaGCGAAGTCTCGACGACGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFPGWSY*RSLDDA Trigger: TGCGTCGTCGAGACTTCGCCAATATGACCAGCCTGG...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGCTGTTGTATTGCACTTaGTACATACGGATGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRLLYCT*YIRMPG Trigger: GCCTGGCATCCGTATGTACCAAGTGCAATACAACAG...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGGCAGAGCTGTTGTATTaGACTTGGTACATACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRAELLY*TWYIRM Trigger: CATCCGTATGTACCAAGTGCAATACAACAGCTCTGC...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CCA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCATTTATGTAGACGGTTaGAGGTCATGTCCAAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPIYVDG*RSCPSA Trigger: TGCGCTTGGACATGACCTCCAACCGTCTACATAAAT...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS GCA 90 bp | CACGGTACTCTCCAGCATCCATTCGGTGCTGGTGAAGGCCAGGCGTaGCCGGGCGGAGCCCAGCCCCAGGTCTCCGTCCTCCCCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HGTLQHPFGAGEGQA*PGGAQPQVSVLPGR Trigger: GCGGCCGGGGAGGACGGAGACCTGGGGCTGGGCTCCGCCCGGGCACGCCTGGCCTTCACCAGCACCGAATGGATGCTGGAGAGTACCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | TCGGAGAGGCCGGCGACCTGCCACCAATCCCGAGGCGGCCGGCCCCGCCCCTCGGAACCAGAGCTAGCGTaGGGGGCGCTGAAGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SERPATCHQSRGGRPRPSEPELA*GALKLE Trigger: CTCCAACTTCAGCGCCCCCAACGCTAGCTCTGGTTC...CGAGGGGCGGGGCCGGCCGCCTCGGGATTGGTGGCAGGTCGCCGGCCTCTCCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS CCA 90 bp | AGGGACAGCCACCTCCCGCAGCGCCTCGTAGCGGTCTGGAGCTGGTaGGGCGGAGGCCTGCTGCGCACCTGCGCCGTTGGTCTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RDSHLPQRLVAVWSW*GGGLLRTCAVGLRA Trigger: TGCTCTCAGACCAACGGCGCAGGTGCGCAGCAGGCCTCCGCCCCACCAGCTCCAGACCGCTACGAGGCGCTGCGGGAGGTGGCTGTCCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS GCA 90 bp | GCCCTCAGCGGGCGGCATGGTGCAGGATCTCCCGCGGTGGTGAATTaGACACAGCCCACCACTCTGGTAGCCGGCAGAGCGGTGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALSGRHGAGSPAVVN*TQPTTLVAGRAVAP Trigger: CGGGGCCACCGCTCTGCCGGCTACCAGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS CCA 90 bp | GCAGTGCAGCGGGTTGCCACCGAAGCTGACCGTCAATGGGGTGGGTaGCTTGGGCCCACCGCCCTGGGACCTCAGGAACAGTCCGTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVQRVATEADRQWGG*LGPTALGPQEQSVG Trigger: CCCGACGGACTGTTCCTGAGGTCCCAGGGCGGTGGGCCCAAGCCACCCACCCCATTGACGGTCAGCTTCGGTGGCAACCCGCTGCACTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
||
| CDS-3UTR CAA 90 bp | CCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAAGGAATGGGCCCCTCGGCCCGGCCCCCTGCTaGCCGTGTGATGAGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPRGRRDLVQPDTRNGPLGPAPC*PCDERG Trigger: CCCCCGCTCATCACACGGCAAGCAGGGGGCCGGGCC...GAGGGGCCCATTCCTTGTATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS GCA 90 bp | AGACTGACAGCCTGGCCCTCTACCACCAGGGCCCGGCCCCCTGCTTaGCGTGTGATGAGCGGGGGCTCACATAGAAATTCCTCCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLTAWPSTTRARPPA*RVMSGGSHRNSSSG Trigger: CCCGGAGGAGGAATTTCTATGTGAGCCCCCGCTCATCACACGGCAAGCAGGGGGCCGGGCCCTGGTGGTAGAGGGCCAGGCTGTCAGTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS-3UTR CAA 90 bp | CTTCGCTGTGTAAGGCACCGGCTCCGGCGAGGTCCGCGAGCGCGCGGGGGACGGAATTTATGTAGACGGTaGGAGGTCATGTCCAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRCVRHRLRRGPRARGGRNLCRR*EVMSKR Trigger: GCGCTTGGACATGACCTCCAACCGTCTACATAAATT...CCGTCCCCCGCGCGCTCGCGGACCTCGCCGGAGCCGGTGCCTTACACAGCGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS TCA 90 bp | AGGCCCGTCTTCGCACACAGCATGGTCAGCGTAGGTGCCACGTTCTaGCAGATGCAGCGACCAGGGCAGGGCTGGCCTCGAGATGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPVFAHSMVSVGATF*QMQRPGQGWPRDAP Trigger: AGGAGCATCTCGAGGCCAGCCCTGCCCTGGTCGCTGCATCTGTCAGAACGTGGCACCTACGCTGACCATGCTGTGTGCGAAGACGGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS GCA 90 bp | GATCATGGTGCCGCCCAAGAAATGGGCCCTCAGCGGGCGGCATGGTaGAGGATCTCCCGCGGTGGTGAATTGCACACAGCCCACCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: DHGAAQEMGPQRAAW*RISRGGELHTAHHS Trigger: AGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCATTTCTTGGGCGGCACCATGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS CCA 90 bp | GATGTCAGAAGAACCAGGTTCAGTGAGAGGCGGCGGGGCAGCGGGTaGGGGCGCCATCAGTGGCAGAGGTACCACACATACCTCCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: DVRRTRFSERRRGSG*GRHQWQRYHTYLHR Trigger: CCTGTGGAGGTATGTGTGGTACCTCTGCCACTGATGGCGCCCCCACCCGCTGCCCCGCCGCCTCTCACTGAACCTGGTTCTTCTGACATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 90 bp | GATGATCATGGTGCCGCCCAAGAAATGGGCCCTCAGCGGGCGGCATaGTGCAGGATCTCCCGCGGTGGTGAATTGCACACAGCCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: DDHGAAQEMGPQRAA*CRISRGGELHTAHH Trigger: GTGGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCATTTCTTGGGCGGCACCATGATCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCCCTCCAAACCAGACTGGTGGGACCAGGGATGGGGCTGAGTGAGGGGCAGAGCAGTTCACAGTaGCAGTGCAGCGGGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSLQTRLVGPGMGLSEGQSSSQ*QCSGLP Trigger: TGGCAACCCGCTGCACTGCAACTGTGAACTGCTCTG...CCCCTCACTCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCCCTCCAAACCAGACTGGTGGGACCAGGGATGGGGCTGAGTGAGGGGTCACTGGTTGAGTCGTaGGCACCAGGTCTGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPSLQTRLVGPGMGLSEGSLVES*APGLPG Trigger: ACCAGGCAGACCTGGTGCCAACGACTCAACCAGTGA...CCCCTCACTCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS GCA 90 bp | CACCACTCTGGTAGCCGGCAGAGCGGTGGCCCCGTCGTCATAGACTaGCAACACACACAAATCATAGGCGCGGCCAGCCGCCAGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: HHSGSRQSGGPVVID*QHTQIIGAASRQVI Trigger: AATGACCTGGCGGCTGGCCGCGCCTATGATTTGTGTGTGTTGGCAGTCTATGACGACGGGGCCACCGCTCTGCCGGCTACCAGAGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS CCA 90 bp | ATTCCTCCCCAGAAGTTTCCTCGGAGGGCAGCAAGCACAGCGAGGTaGCGGAGCCACCCAGAGAGCGTCCAAGCACCACCTCTAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IPPQKFPRRAASTAR*RSHPESVQAPPLAQ Trigger: CTGAGCTAGAGGTGGTGCTTGGACGCTCTCTGGGTGGCTCCGCCACCTCGCTGTGCTTGCTGCCCTCCGAGGAAACTTCTGGGGAGGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | TCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGAACCTCTGCCAGGCGGTaGCTGTCAAGGTGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SVGPARKMVRTGNRERHGTSARR*LSRCRA Trigger: GGCCCTGCACCTTGACAGCAACCGCCTGGCAGAGGT...TCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTTGCAGTGCAGCGGGTaGCCACCGAAGCTGACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VGPARKMVRTGNRERHGHLQCSG*PPKLTV Trigger: GACGGTCAGCTTCGGTGGCAACCCGCTGCACTGCAA...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | GTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGACACTCCCGCGGTGGTGAATaGCACACAGCCCACCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGPARKMVRTGNRERHGHSRGGE*HTAHHS Trigger: AGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGGA...GTGTCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS TCA 90 bp | GTGGACAGGAAGGCGTCAAAGGCTGCCGACTCCACCTTACGGATCTaGTTGTTGCCGAGGATCAAGTGGCGGAGGTTACCCAAGCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VDRKASKAADSTLRI*LLPRIKWRRLPKPR Trigger: CCGGGGCTTGGGTAACCTCCGCCACTTGATCCTCGGCAACAATCAGATCCGTAAGGTGGAGTCGGCAGCCTTTGACGCCTTCCTGTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS GCA 90 bp | TGGGGGCGCCATCAGTGGCAGAGGTACCACACATACCTCCACAGGTaGTGTGGCTTCCCCCGCAGCATTGGAGGCTATGCAAGTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WGRHQWQRYHTYLHR*CGFPRSIGGYASEG Trigger: ACCTTCACTTGCATAGCCTCCAATGCTGCGGGGGAAGCCACAGCACCTGTGGAGGTATGTGTGGTACCTCTGCCACTGATGGCGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS-3UTR CAA 90 bp | GACTGGAGGCTTTGGAGGCCGCCGCGGGGCAGAAGAGATCTAGTCCAGCCAGATACAGCCGCAATGAAGTaGTCAGTGAGCCGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DWRLWRPPRGRRDLVQPDTAAMK*SVSRSS Trigger: AGAGCTGCGGCTCACTGACAACTTCATTGCGGCTGT...ATCTGGCTGGACTAGATCTCTTCTGCCCCGCGGCGGCCTCCAAAGCCTCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | TCTGTGGGACCTGCCCGGAAGATGGTGAGGACAGGGAATCGGGAAAGACACGGAACCAGGCTGGTCATATaGGCGAAGTCTCGACGACGC | + |
|
Preference number: 5 (lower is better) Translates to: SVGPARKMVRTGNRERHGTRLVI*AKSRRR Trigger: GCGTCGTCGAGACTTCGCCAATATGACCAGCCTGGT...TCCGTGTCTTTCCCGATTCCCTGTCCTCACCATCTTCCGGGCAGGTCCCACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS-3UTR CAA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGGGCCCGGCCCCCTGCTaGCCGTGTGATGAGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRGPAPC*PCDERG Trigger: CCCCCGCTCATCACACGGCAAGCAGGGGGCCGGGCC...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS TCA 90 bp | CACATAGAAATTCCTCCTCCGGGATGGACCAGAAATAGCGGTCAGTaGGATGCTCGGGCGTGGCACACGTCTCCAAGTCGTCCTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HIEIPPPGWTRNSGQ*DARAWHTSPSRPPW Trigger: CCAGGGAGGACGACTTGGAGACGTGTGCCACGCCCGAGCATCTCACTGACCGCTATTTCTGGTCCATCCCGGAGGAGGAATTTCTATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS TCA 90 bp | AGAGCTAGACGTGAGTTCAGCAGCCACAAGCCTGCGCTCACTGGTTaGGTCGTTGGCACCAGGTCTGCCTGGTGTGGCGATGTCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RARREFSSHKPALTG*VVGTRSAWCGDVRR Trigger: TCTTCTGACATCGCCACACCAGGCAGACCTGGTGCCAACGACTCAACCAGTGAGCGCAGGCTTGTGGCTGCTGAACTCACGTCTAGCTCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 90 bp | CTGTTGTATTGCACTTGGTACATACGGATGCCAGGCACTGGCCTCTaGGCCGGCCAGCGGATGAGCACAGAGCTAGACGTGAGTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLYCTWYIRMPGTGL*AGQRMSTELDVSSA Trigger: TGCTGAACTCACGTCTAGCTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGTATGTACCAAGTGCAATACAACAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
||
| CDS-3UTR CAA 90 bp | GGGGCGAAGGAAGGTAGAGAGAAGAGTCTGGTCCTTCTGTGGGACCTGCCCGGAGCTGTTGTATTGCACTaGGTACATACGGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAKEGREKSLVLLWDLPGAVVLH*VHTDAR Trigger: CCTGGCATCCGTATGTACCAAGTGCAATACAACAGC...TCCGGGCAGGTCCCACAGAAGGACCAGACTCTTCTCTCTACCTTCCTTCGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTCCCTCCAAACCAGACTGGTGGGACCAGGGATGGGGCTGAGTGAGGGGTCATCTGCAGAGCTGTaGTATTGCACTTGGTACATA | + |
|
Preference number: 5 (lower is better) Translates to: SPSLQTRLVGPGMGLSEGSSAEL*YCTWYI Trigger: TATGTACCAAGTGCAATACAACAGCTCTGCAGATGA...CCCCTCACTCAGCCCCATCCCTGGTCCCACCAGTCTGGTTTGGAGGGAGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
||
| CDS-3UTR CAA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCTTGCAGTGCAGCGGGTaGCCACCGAAGCTGACCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPLQCSG*PPKLTV Trigger: GACGGTCAGCTTCGGTGGCAACCCGCTGCACTGCAA...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CAA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGACCAGGCTGGTCATATaGGCGAAGTCTCGACGACGC | + |
|
Preference number: 5 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRTRLVI*AKSRRR Trigger: GCGTCGTCGAGACTTCGCCAATATGACCAGCCTGGT...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CAA 90 bp | TATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCAGGTCACTGGTTGAGTCGTaGGCACCAGGTCTGCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YKLLFQGQAVMAQVIFPRSLVES*APGLPG Trigger: ACCAGGCAGACCTGGTGCCAACGACTCAACCAGTGA...CCTGGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
||
| CDS-3UTR CAA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCACAGCCGCAATGAAGTaGTCAGTGAGCCGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPTAAMK*SVSRSS Trigger: AGAGCTGCGGCTCACTGACAACTTCATTGCGGCTGT...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CAA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCAGAGCAGTTCACAGTaGCAGTGCAGCGGGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFQSSSQ*QCSGLP Trigger: TGGCAACCCGCTGCACTGCAACTGTGAACTGCTCTG...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CAA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTGCTGTTGTATTGCACTaGGTACATACGGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFAVVLH*VHTDAR Trigger: CCTGGCATCCGTATGTACCAAGTGCAATACAACAGC...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CAA 90 bp | CCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTCCCTCATCTGCAGAGCTGTaGTATTGCACTTGGTACATA | + |
|
Preference number: 5 (lower is better) Translates to: PYKLLFQGQAVMAQVIFPSSAEL*YCTWYI Trigger: TATGTACCAAGTGCAATACAACAGCTCTGCAGATGA...GGGAAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS-3UTR CAA 90 bp | TTTCCTTATAAACTTTTATTTCAGGGCCAGGCGGTGATGGCACAGGTCATTTTTAATTTATGTAGACGGTaGGAGGTCATGTCCAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FPYKLLFQGQAVMAQVIFNLCRR*EVMSKR Trigger: GCGCTTGGACATGACCTCCAACCGTCTACATAAATT...AAAAATGACCTGTGCCATCACCGCCTGGCCCTGAAATAAAAGTTTATAAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189877.7 |
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| CDS CAA 90 bp | CGCCCCCTCCGGCCCCGTCCAGGTGTGGCGTGGACCGGTGGCGCTTaGTCCGCCGGGCGCGGCGCGGGTAACTGTGACTCTGGAACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RPLRPRPGVAWTGGA*SAGRGAGNCDSGTA Trigger: CGCTGTTCCAGAGTCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACGCCACACCTGGACGGGGCCGGAGGGGGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS TCA 72 bp | GGGGCGGAGGCCTGCTGCGCACCTGCGCCGTTGGTCTaGGAGCACACGTGGCTGACCCGAGGGGGCGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAEACCAPAPLV*EHTWLTRGGVL Trigger: CAGGACGCCCCCTCGGGTCAGCCACGTGTGCTCTCAGACCAACGGCGCAGGTGCGCAGCAGGCCTCCGCCCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS CCA 72 bp | GGGTCACCCACAGCCCGGCAGCGCAGACTGACAGCCTaGCCCTCTACCACCAGGGCCCGGCCCCCTGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSPTARQRRLTA*PSTTRARPPAC Trigger: GCAAGCAGGGGGCCGGGCCCTGGTGGTAGAGGGCCAGGCTGTCAGTCTGCGCTGCCGGGCTGTGGGTGACCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 72 bp | CACCTCCCGCAGCGCCTCGTAGCGGTCTGGAGCTGGTaGGGCGGAGGCCTGCTGCGCACCTGCGCCGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLPQRLVAVWSW*GGGLLRTCAVG Trigger: ACCAACGGCGCAGGTGCGCAGCAGGCCTCCGCCCCACCAGCTCCAGACCGCTACGAGGCGCTGCGGGAGGTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS CAA 72 bp | CGGCCCCGTCCAGGTGTGGCGTGGACCGGTGGCGCTTaGTCCGCCGGGCGCGGCGCGGGTAACTGTGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPRPGVAWTGGA*SAGRGAGNCDS Trigger: AGAGTCACAGTTACCCGCGCCGCGCCCGGCGGACAAAGCGCCACCGGTCCACGCCACACCTGGACGGGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS CAA 90 bp | GGCCCTCAGCGGGCGGCATGGTGCAGGATCTCCCGCGGTGGTGAATaGCACACAGCCCACCACTCTGGTAGCCGGCAGAGCGGTGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GPQRAAWCRISRGGE*HTAHHSGSRQSGGP Trigger: GGGGCCACCGCTCTGCCGGCTACCAGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS GCA 72 bp | TCCCCTCGCACCTCTGCCAGGCGGTTGCTGTCAAGGTaGAGGGCCCGGAGAGCCCGGAGGTCAGCAAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SPRTSARRLLSR*RARRARRSAKA Trigger: CGCCTTTGCTGACCTCCGGGCTCTCCGGGCCCTGCACCTTGACAGCAACCGCCTGGCAGAGGTGCGAGGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS GCA 72 bp | GAGTTCCCCAGCAGCCGTCCATCAGGTGCCACCCAATaGACCACGGGCTCGGGGTCACCCACAGCCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EFPSSRPSGATQ*TTGSGSPTARQ Trigger: CTGCCGGGCTGTGGGTGACCCCGAGCCCGTGGTGCATTGGGTGGCACCTGATGGACGGCTGCTGGGGAACTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 72 bp | GCAGTGCAGCGGGTTGCCACCGAAGCTGACCGTCAATaGGGTGGGTGGCTTGGGCCCACCGCCCTGGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: AVQRVATEADRQ*GGWLGPTALGP Trigger: AGGTCCCAGGGCGGTGGGCCCAAGCCACCCACCCCATTGACGGTCAGCTTCGGTGGCAACCCGCTGCACTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS GCA 72 bp | AGTCCGGCTGGAGTTCCCCAGCAGCCGTCCATCAGGTaGCACCCAATGCACCACGGGCTCGGGGTCACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPAGVPQQPSIR*HPMHHGLGVTH Trigger: GTGGGTGACCCCGAGCCCGTGGTGCATTGGGTGGCACCTGATGGACGGCTGCTGGGGAACTCCAGCCGGACT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 72 bp | CGGGTTGCCACCGAAGCTGACCGTCAATGGGGTGGGTaGCTTGGGCCCACCGCCCTGGGACCTCAGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: RVATEADRQWGG*LGPTALGPQEQ Trigger: CTGTTCCTGAGGTCCCAGGGCGGTGGGCCCAAGCCACCCACCCCATTGACGGTCAGCTTCGGTGGCAACCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 72 bp | CATCCAGCGTTCCGTCACCACGGACCCGAGTCCGGCTaGAGTTCCCCAGCAGCCGTCCATCAGGTGCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: HPAFRHHGPESG*SSPAAVHQVPP Trigger: GGGTGGCACCTGATGGACGGCTGCTGGGGAACTCCAGCCGGACTCGGGTCCGTGGTGACGGAACGCTGGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS GCA 72 bp | GCCTGGCCCTCTACCACCAGGGCCCGGCCCCCTGCTTaGCGTGTGATGAGCGGGGGCTCACATAGAAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: AWPSTTRARPPA*RVMSGGSHRNS Trigger: GGAATTTCTATGTGAGCCCCCGCTCATCACACGGCAAGCAGGGGGCCGGGCCCTGGTGGTAGAGGGCCAGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS GCA 72 bp | GCCGCCCAAGAAATGGGCCCTCAGCGGGCGGCATGGTaGAGGATCTCCCGCGGTGGTGAATTGCACACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAQEMGPQRAAW*RISRGGELHTA Trigger: GGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCATTTCTTGGGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS CAA 72 bp | CGGGCGGCATGGTGCAGGATCTCCCGCGGTGGTGAATaGCACACAGCCCACCACTCTGGTAGCCGGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAAWCRISRGGE*HTAHHSGSRQS Trigger: GCTCTGCCGGCTACCAGAGTGGTGGGCTGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS GCA 72 bp | GGTAGCCGGCAGAGCGGTGGCCCCGTCGTCATAGACTaGCAACACACACAAATCATAGGCGCGGCCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GSRQSGGPVVID*QHTQIIGAASR Trigger: GCGGCTGGCCGCGCCTATGATTTGTGTGTGTTGGCAGTCTATGACGACGGGGCCACCGCTCTGCCGGCTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS CCA 72 bp | AGAGCCCGGAGGTCAGCAAAGGCGCCGGCTGCTACCTaGCCAATGGTGTTGCGAGACAGGGTGAGGTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: RARRSAKAPAAT*PMVLRDRVRWT Trigger: GGTCCACCTCACCCTGTCTCGCAACACCATTGGCCAGGTAGCAGCCGGCGCCTTTGCTGACCTCCGGGCTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS CCA 72 bp | GGTGCCGCCCAAGAAATGGGCCCTCAGCGGGCGGCATaGTGCAGGATCTCCCGCGGTGGTGAATTGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: GAAQEMGPQRAA*CRISRGGELHT Trigger: TGTGTGCAATTCACCACCGCGGGAGATCCTGCACCATGCCGCCCGCTGAGGGCCCATTTCTTGGGCGGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS TCA 72 bp | AGGATCAAGTGGCGGAGGTTACCCAAGCCCCGGAGCTaGTCCCCTCGCACCTCTGCCAGGCGGTTGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RIKWRRLPKPRS*SPRTSARRLLS Trigger: TGACAGCAACCGCCTGGCAGAGGTGCGAGGGGATCAGCTCCGGGGCTTGGGTAACCTCCGCCACTTGATCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS GCA 72 bp | CAGGCCCGTCTTCGCACACAGCATGGTCAGCGTAGGTaGCACGTTCTGACAGATGCAGCGACCAGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QARLRTQHGQRR*HVLTDAATRAG Trigger: CCCTGCCCTGGTCGCTGCATCTGTCAGAACGTGGCACCTACGCTGACCATGCTGTGTGCGAAGACGGGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS CCA 72 bp | CAGAAGTTTCCTCGGAGGGCAGCAAGCACAGCGAGGTaGCGGAGCCACCCAGAGAGCGTCCAAGCACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: QKFPRRAASTAR*RSHPESVQAPP Trigger: AGGTGGTGCTTGGACGCTCTCTGGGTGGCTCCGCCACCTCGCTGTGCTTGCTGCCCTCCGAGGAAACTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108288.9 |
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| CDS TCA 72 bp | TTCGCACACAGCATGGTCAGCGTAGGTGCCACGTTCTaGCAGATGCAGCGACCAGGGCAGGGCTGGCCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: FAHSMVSVGATF*QMQRPGQGWPR Trigger: TCGAGGCCAGCCCTGCCCTGGTCGCTGCATCTGTCAGAACGTGGCACCTACGCTGACCATGCTGTGTGCGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS CCA 72 bp | TGCACTTGGTACATACGGATGCCAGGCACTGGCCTCTaGGCCGGCCAGCGGATGAGCACAGAGCTAGACGTG | + |
|
Preference number: 6 (lower is better) Translates to: CTWYIRMPGTGL*AGQRMSTELDV Trigger: CACGTCTAGCTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGTATGTACCAAGTGCA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 72 bp | CAGCAGCCACAAGCCTGCGCTCACTGGTTGAGTCGTTaGCACCAGGTCTGCCTGGTGTGGCGATGTCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QQPQACAHWLSR*HQVCLVWRCQK Trigger: CTTCTGACATCGCCACACCAGGCAGACCTGGTGCCAACGACTCAACCAGTGAGCGCAGGCTTGTGGCTGCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CAA 90 bp | GGTACCACACATACCTCCACAGGTGCTGTGGCTTCCCCCGCAGCATaGGAGGCTATGCAAGTGAAGGTACCGCTGTCCCTCAGGGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GTTHTSTGAVASPAA*EAMQVKVPLSLRVV Trigger: CACCACCCTGAGGGACAGCGGTACCTTCACTTGCATAGCCTCCAATGCTGCGGGGGAAGCCACAGCACCTGTGGAGGTATGTGTGGTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS TCA 72 bp | TTGTGGTCCAGCGTGAGGGTGTTCAAGTTCACCATCTaGCCCACCGCCTCCCATGGCAGTGCCTCCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LWSSVRVFKFTI*PTASHGSASRL Trigger: CAACCTGGAGGCACTGCCATGGGAGGCGGTGGGTCAGATGGTGAACTTGAACACCCTCACGCTGGACCACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS GCA 72 bp | GCCTGCGCTCACTGGTTGAGTCGTTGGCACCAGGTCTaGCTGGTGTGGCGATGTCAGAAGAACCAGGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ACAHWLSRWHQV*LVWRCQKNQVQ Trigger: CTGAACCTGGTTCTTCTGACATCGCCACACCAGGCAGACCTGGTGCCAACGACTCAACCAGTGAGCGCAGGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CCA 72 bp | GTTGTATTGCACTTGGTACATACGGATGCCAGGCACTaGCCTCTGGGCCGGCCAGCGGATGAGCACAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VVLHLVHTDARH*PLGRPADEHRA Trigger: AGCTCTGTGCTCATCCGCTGGCCGGCCCAGAGGCCAGTGCCTGGCATCCGTATGTACCAAGTGCAATACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CAA 72 bp | TCAGCAGCCACAAGCCTGCGCTCACTGGTTGAGTCGTaGGCACCAGGTCTGCCTGGTGTGGCGATGTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SAATSLRSLVES*APGLPGVAMSE Trigger: TTCTGACATCGCCACACCAGGCAGACCTGGTGCCAACGACTCAACCAGTGAGCGCAGGCTTGTGGCTGCTGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CAA 90 bp | GACGTGAGTTCAGCAGCCACAAGCCTGCGCTCACTGGTTGAGTCGTaGGCACCAGGTCTGCCTGGTGTGGCGATGTCAGAAGAACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: DVSSAATSLRSLVES*APGLPGVAMSEEPG Trigger: ACCTGGTTCTTCTGACATCGCCACACCAGGCAGACCTGGTGCCAACGACTCAACCAGTGAGCGCAGGCTTGTGGCTGCTGAACTCACGTC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS TCA 72 bp | ATTCCTCCTCCGGGATGGACCAGAAATAGCGGTCAGTaGGATGCTCGGGCGTGGCACACGTCTCCAAGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: IPPPGWTRNSGQ*DARAWHTSPSR Trigger: ACGACTTGGAGACGTGTGCCACGCCCGAGCATCTCACTGACCGCTATTTCTGGTCCATCCCGGAGGAGGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS GCA 72 bp | CAAAGGCTGCCGACTCCACCTTACGGATCTGATTGTTaGCGAGGATCAAGTGGCGGAGGTTACCCAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QRLPTPPYGSDC*RGSSGGGYPSP Trigger: GGGGCTTGGGTAACCTCCGCCACTTGATCCTCGGCAACAATCAGATCCGTAAGGTGGAGTCGGCAGCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS GCA 72 bp | CATCAGTGGCAGAGGTACCACACATACCTCCACAGGTaGTGTGGCTTCCCCCGCAGCATTGGAGGCTATGCA | + |
|
Preference number: 6 (lower is better) Translates to: HQWQRYHTYLHR*CGFPRSIGGYA Trigger: TGCATAGCCTCCAATGCTGCGGGGGAAGCCACAGCACCTGTGGAGGTATGTGTGGTACCTCTGCCACTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 |
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| CDS CAA 72 bp | TTGCGAGACAGGGTGAGGTGGACCAGGCTGGTCATATaGGCGAAGTCTCGACGACGCACAGCCGCAATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRDRVRWTRLVI*AKSRRRTAAMK Trigger: CTTCATTGCGGCTGTGCGTCGTCGAGACTTCGCCAATATGACCAGCCTGGTCCACCTCACCCTGTCTCGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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| CDS TCA 72 bp | AAGGCGTCAAAGGCTGCCGACTCCACCTTACGGATCTaGTTGTTGCCGAGGATCAAGTGGCGGAGGTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: KASKAADSTLRI*LLPRIKWRRLP Trigger: GGGTAACCTCCGCCACTTGATCCTCGGCAACAATCAGATCCGTAAGGTGGAGTCGGCAGCCTTTGACGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055110.11 ENSMUST00000108288.9 ENSMUST00000189877.7 ENSMUST00000190954.7 |
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