Pregenerated sensors for LRCH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093445Ensembl transcript IDs: ENSMUST00000031734.16, ENSMUST00000175968.8, ENSMUST00000176011.8, ENSMUST00000176667.8, ENSMUST00000176768.2, ENSMUST00000176871.2, ENSMUST00000177477.2
Found 235 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACCAGGATCACAGCCTCCAGGACGGTCTGCAGCCCCTGGGCGGTaGCCCGGAGGAGATCCGAGGGCGAGCACAGGTCAGCCTGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: QPGSQPPGRSAAPGR*PGGDPRASTGQPGE Trigger: CTCCCCAGGCTGACCTGTGCTCGCCCTCGGATCTCCTCCGGGGCACCGCCCAGGGGCTGCAGACCGTCCTGGAGGCTGTGATCCTGGTTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR CCA 90 bp | CTGGGCCCAGGTGTCATCTGCTCCCAGGACAGGTCCGATGGTAGTTaGGGCCCAGAGCCCCCAACCTCTACCCCTAAGGCTGTTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LGPGVICSQDRSDGS*GPEPPTSTPKAVPE Trigger: TTCTGGAACAGCCTTAGGGGTAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGATGACACCTGGGCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR TCA 90 bp | GACTCTGTAGGGGGTTGCTATCCAGCAGAACGACCTGCAGGTGCCTaGGGCGGCAGAAGGAGACGGGGATTCGGGAGATGCGGTTACAGG | + |
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Preference number: 1 (lower is better) Translates to: DSVGGCYPAERPAGA*GGRRRRGFGRCGYR Trigger: CCTGTAACCGCATCTCCCGAATCCCCGTCTCCTTCTGCCGCCTCAGGCACCTGCAGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR GCA 90 bp | GGTGGACTCTGTAGGGGGTTGCTATCCAGCAGAACGACCTGCAGGTaGCTGAGGCGGCAGAAGGAGACGGGGATTCGGGAGATGCGGTTA | + |
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Preference number: 1 (lower is better) Translates to: GGLCRGLLSSRTTCR*LRRQKETGIREMRL Trigger: TAACCGCATCTCCCGAATCCCCGTCTCCTTCTGCCGCCTCAGGCACCTGCAGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTCCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR TCA 90 bp | CCTAGGAGCCCAGGAGCCGAGTGTAGACGACATAGAGCAGCAGCATaGAGACCACGTAGAAGAGGAGGAAGCCACCCAGACCAGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PRSPGAECRRHRAAA*RPRRRGGSHPDQRR Trigger: CCTCCTCTGGTCTGGGTGGCTTCCTCCTCTTCTACGTGGTCTTCATGCTGCTGCTCTATGTCGTCTACACTCGGCTCCTGGGCTCCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR CCA 90 bp | GAAGAGAAAAGCCACAGTCCTGTCATCCGACGGGGGACAGAGGGCTaGCCGGGAGAACACGAAGGCACCATCAGCACTAAGGGTAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: EEKSHSPVIRRGTEG*PGEHEGTISTKGKG Trigger: ACCCTTACCCTTAGTGCTGATGGTGCCTTCGTGTTCTCCCGGCCAGCCCTCTGTCCCCCGTCGGATGACAGGACTGTGGCTTTTCTCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR CCA 90 bp | CGGACCAGAGGAAGGTCTCCCAGCTCATCAGGCAGGGTACTGAGCTaGTTCCTTCGAACATTGAGATCCCGCAGGGAACGGAGGCTACAC | + |
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Preference number: 1 (lower is better) Translates to: RTRGRSPSSSGRVLS*FLRTLRSRRERRLH Trigger: GTGTAGCCTCCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCAGCTCAGTACCCTGCCTGATGAGCTGGGAGACCTTCCTCTGGTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR CCA 90 bp | CCGGCTGAGGTTGAGGTAGGTGAGGGCTGTAAGATTCCCCAAGGCTaGGTTCAGGCATTTCAGGCAATTGTGGTAGAGGCTCAGGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: PAEVEVGEGCKIPQG*VQAFQAIVVEAQAF Trigger: GAAGGCCTGAGCCTCTACCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGGAATCTTACAGCCCTCACCTACCTCAACCTCAGCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
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| 3UTR TCA 90 bp | GCGGCTCCCCTCCGGCCAGCTTCCATTGTTAGGTACTTGAAGATGTaGAGTTTCCCCTTCAGGCATATCTGGGCAGGTGGACTCTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: AAPLRPASIVRYLKM*SFPFRHIWAGGLCR Trigger: CCTACAGAGTCCACCTGCCCAGATATGCCTGAAGGGGAAACTTCACATCTTCAAGTACCTAACAATGGAAGCTGGCCGGAGGGGAGCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR TCA 90 bp | ACAAGACCTGGCTGCAGCAGGAGCTCACACACGCACACACAGAGGTaGCAATCTATACAGTTTATACACAGAGCCAGGGGCCCATACTGG | + |
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Preference number: 1 (lower is better) Translates to: TRPGCSRSSHTHTQR*QSIQFIHRARGPYW Trigger: CCAGTATGGGCCCCTGGCTCTGTGTATAAACTGTATAGATTGTCACCTCTGTGTGTGCGTGTGTGAGCTCCTGCTGCAGCCAGGTCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR CCA 90 bp | TGGGGACAAATGACACATAGAAGCTGCCAGCAGGTAACAGACGGGTaGTTAACACAGGGGACTGGGACAGGAGAGGCCTGTCATTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: WGQMTHRSCQQVTDG*LTQGTGTGEACHFQ Trigger: TTGGAAATGACAGGCCTCTCCTGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATGTGTCATTTGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR CCA 90 bp | AGTGCTACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTaGGCCCAGGTGTCATCTGCTCCCAGGACAGGTCCGATGGTAGTT | + |
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Preference number: 1 (lower is better) Translates to: SATHKTMVTKSLLIG*AQVSSAPRTGPMVV Trigger: AACTACCATCGGACCTGTCCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
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| 3UTR GCA 90 bp | GCTCTGAAAAATCATCTGTGGACTCATTTCCTGACCACCTCTTGCTaGCACTGTCAACGCTGTGGAAGCCTGAGTCCAGGCCACCATCAT | + |
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Preference number: 1 (lower is better) Translates to: ALKNHLWTHFLTTSC*HCQRCGSLSPGHHH Trigger: ATGATGGTGGCCTGGACTCAGGCTTCCACAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAAATGAGTCCACAGATGATTTTTCAGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR-3UTR GCA 90 bp | CACCCAGACCAGAGGAGGGCTGGACTGGGAGAGGGGCCTTGCCCCCAACCAGGAGCAGCCCCTGGGCGGTaGCCCGGAGGAGATCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: HPDQRRAGLGEGPCPQPGAAPGR*PGGDPR Trigger: CCTCGGATCTCCTCCGGGGCACCGCCCAGGGGCTGC...TCCTGGTTGGGGGCAAGGCCCCTCTCCCAGTCCAGCCCTCCTCTGGTCTGGGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR CAA 90 bp | AGGAAGCCACCCAGACCAGAGGAGGGCTGGACTGGGAGAGGGGCCTaGCCCCCAACCAGGATCACAGCCTCCAGGACGGTCTGCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RKPPRPEEGWTGRGA*PPTRITASRTVCSP Trigger: GGGGCTGCAGACCGTCCTGGAGGCTGTGATCCTGGTTGGGGGCAAGGCCCCTCTCCCAGTCCAGCCCTCCTCTGGTCTGGGTGGCTTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGGGAAGGGACCAGGTCCCCGAGGGCGGCTCCCCTCCGGCCAGCTTCCATTGGGTTCCTTCGAACATTaGGATCCCGCAGGGAACGGA | + |
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Preference number: 2 (lower is better) Translates to: GGKGPGPRGRLPSGQLPLGSFEH*DPAGNG Trigger: TCCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACC...CAATGGAAGCTGGCCGGAGGGGAGCCGCCCTCGGGGACCTGGTCCCTTCCCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAACGTGGGTCCTAGGAGCCCAGGAGCCGAGTGTAGACGACATAGAGCAGAGAGGAGGGCTGGACTaGGAGAGGGGCCTTGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GATWVLGAQEPSVDDIEQRGGLD*ERGLAP Trigger: GGGGGCAAGGCCCCTCTCCCAGTCCAGCCCTCCTCT...CTGCTCTATGTCGTCTACACTCGGCTCCTGGGCTCCTAGGACCCACGTTGCCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGATCACAGCCTCCAGGACGGTCTGCAGCCCCTGGGCGGTGCCCCGGAGGAGGAGGACAGGGCAGATaGACAAGGACAAATCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: PGSQPPGRSAAPGRCPGGGGQGR*TRTNHR Trigger: TCTGTGATTTGTCCTTGTCCATCTGCCCTGTCCTCC...TCCTCCGGGGCACCGCCCAGGGGCTGCAGACCGTCCTGGAGGCTGTGATCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR CAA 90 bp | TCTCCCAGCTCATCAGGCAGGGTACTGAGCTGGTTCCTTCGAACATaGAGATCCCGCAGGGAACGGAGGCTACACAGCTCCACGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPSSSGRVLSWFLRT*RSRRERRLHSSTGR Trigger: CCTGCCCGTGGAGCTGTGTAGCCTCCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCAGCTCAGTACCCTGCCTGATGAGCTGGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGGTGCCTGAGGCGGCAGAAGGAGACGGGGATTCGGGAGATGCGGTTACAGGGACTGCAGCTCATTaGTGCTCACATCAAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LQVPEAAEGDGDSGDAVTGTAAH*CSHQAA Trigger: GGCAGCTTGATGTGAGCAGCAATGAGCTGCAGTCCC...TGTAACCGCATCTCCCGAATCCCCGTCTCCTTCTGCCGCCTCAGGCACCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR CAA 90 bp | AGTTTCCCCTTCAGGCATATCTGGGCAGGTGGACTCTGTAGGGGGTaGCTATCCAGCAGAACGACCTGCAGGTGCCTGAGGCGGCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SFPFRHIWAGGLCRG*LSSRTTCRCLRRQK Trigger: CTTCTGCCGCCTCAGGCACCTGCAGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTCCACCTGCCCAGATATGCCTGAAGGGGAAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGTAGAGGCTCAGGCCTTCCACCAGCTGGCAAGCTaGCTCAGGCACCTCGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PQGWVQAFQAIVVEAQAFHQLAS*LRHLGK Trigger: TTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTG...GAAGGCCTGAGCCTCTACCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
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| 3UTR-3UTR TCA 90 bp | TACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCAGGACAGCAGCGATGTaGGGGAGGCCCCTTCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: YTQDHGHQVLVNWLGPGVRTAAM*GRPLPG Trigger: CCCTGGAAGGGGCCTCCCTCACATCGCTGCTGTCCT...GACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR-3UTR GCA 90 bp | ACCAGAGGAAGGTCTCCCAGCTCATCAGGCAGGGTACTGAGCTGGTTCCTTCGACTGCTCACATCAAGCTaGCGCAGGCTTCCCAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: TRGRSPSSSGRVLSWFLRLLTSS*RRLPKV Trigger: CACCTTGGGAAGCCTGCGGCAGCTTGATGTGAGCAG...TCGAAGGAACCAGCTCAGTACCCTGCCTGATGAGCTGGGAGACCTTCCTCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCAGGTCCGATGGTAGTTaGGGCCCAGAGCCCCCAACC | + |
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Preference number: 2 (lower is better) Translates to: QDHGHQVLVNWLGPGVICRSDGS*GPEPPT Trigger: GGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCT...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGAAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACAAGGCAGGACAAGACCTaGCTGCAGCAGGAGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: HRSCQQVTDGWLTQGTGTRQDKT*LQQELT Trigger: TGTGAGCTCCTGCTGCAGCCAGGTCTTGTCCTGCCT...TGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR-3UTR CCA 90 bp | ACACAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGACACTGCCCCATACCTaGGGACAAATGACACATAGA | + |
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Preference number: 2 (lower is better) Translates to: TQRSSPRWGLYPKQPKGRTLPHT*GQMTHR Trigger: TCTATGTGTCATTTGTCCCCAGGTATGGGGCAGTGT...CCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR CAA 90 bp | ATATCCAAGGCCAGTGCTACACACAAGACCATGGTCACCAAGTCCTaGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGGACAGGT | + |
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Preference number: 2 (lower is better) Translates to: ISKASATHKTMVTKS*LIGWAQVSSAPRTG Trigger: ACCTGTCCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACTGGCCTTGGATAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCTAGGAGCCCAGGAGCCGAGTGTAGACGACATAGAGCAGCAGCATGAACTTATAAATAGAAGGTaGGGAAGGAAGGGGCAACGT | + |
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Preference number: 2 (lower is better) Translates to: WVLGAQEPSVDDIEQQHELINRR*GRKGQR Trigger: ACGTTGCCCCTTCCTTCCCCACCTTCTATTTATAAG...TTCATGCTGCTGCTCTATGTCGTCTACACTCGGCTCCTGGGCTCCTAGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGGCTTATAAATAGAAGGTaGGGAAGGAAGGGGCAACGT | + |
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Preference number: 2 (lower is better) Translates to: MVTKSLLIGWAQVSSAPRLINRR*GRKGQR Trigger: ACGTTGCCCCTTCCTTCCCCACCTTCTATTTATAAG...CCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR-3UTR GCA 90 bp | GAAAAATCATCTGTGGACTCATTTCCTGACCACCTCTTGCTGCCACTGTCAACGGACTCTGTAGGGGGTTaGTATCCAGCAGAACGACCT | + |
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Preference number: 2 (lower is better) Translates to: EKSSVDSFPDHLLLPLSTDSVGG*YPAERP Trigger: AGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTC...CGTTGACAGTGGCAGCAAGAGGTGGTCAGGAAATGAGTCCACAGATGATTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR GCA 72 bp | TCACAGCCTCCAGGACGGTCTGCAGCCCCTGGGCGGTaGCCCGGAGGAGATCCGAGGGCGAGCACAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: SQPPGRSAAPGR*PGGDPRASTGQ Trigger: CTGACCTGTGCTCGCCCTCGGATCTCCTCCGGGGCACCGCCCAGGGGCTGCAGACCGTCCTGGAGGCTGTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR CCA 72 bp | ACCAGGATCACAGCCTCCAGGACGGTCTGCAGCCCCTaGGCGGTGCCCCGGAGGAGATCCGAGGGCGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: TRITASRTVCSP*AVPRRRSEGEH Trigger: GTGCTCGCCCTCGGATCTCCTCCGGGGCACCGCCCAGGGGCTGCAGACCGTCCTGGAGGCTGTGATCCTGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR TCA 72 bp | GGGGGTTGCTATCCAGCAGAACGACCTGCAGGTGCCTaGGGCGGCAGAAGGAGACGGGGATTCGGGAGATGC | + |
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Preference number: 3 (lower is better) Translates to: GGCYPAERPAGA*GGRRRRGFGRC Trigger: GCATCTCCCGAATCCCCGTCTCCTTCTGCCGCCTCAGGCACCTGCAGGTCGTTCTGCTGGATAGCAACCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR GCA 72 bp | TGTAGGGGGTTGCTATCCAGCAGAACGACCTGCAGGTaGCTGAGGCGGCAGAAGGAGACGGGGATTCGGGAG | + |
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Preference number: 3 (lower is better) Translates to: CRGLLSSRTTCR*LRRQKETGIRE Trigger: CTCCCGAATCCCCGTCTCCTTCTGCCGCCTCAGGCACCTGCAGGTCGTTCTGCTGGATAGCAACCCCCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR CCA 72 bp | GGTGTCATCTGCTCCCAGGACAGGTCCGATGGTAGTTaGGGCCCAGAGCCCCCAACCTCTACCCCTAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GVICSQDRSDGS*GPEPPTSTPKA Trigger: AGCCTTAGGGGTAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGATGACACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR GCA 72 bp | TACACAGCTCCACGGGCAGGGACTGCAGCTCATTGCTaGTCACATCAAGCTGCCGCAGGCTTCCCAAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: YTAPRAGTAAHC*SHQAAAGFPRC Trigger: GCACCTTGGGAAGCCTGCGGCAGCTTGATGTGAGCAGCAATGAGCTGCAGTCCCTGCCCGTGGAGCTGTGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR-3UTR CAA 90 bp | GAGACGGGGATTCGGGAGATGCGGTTACAGGAGAAATCCAGGCGGACCAGAGGATGGTTCCTTCGAACATaGAGATCCCGCAGGGAACGG | + |
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Preference number: 3 (lower is better) Translates to: ETGIREMRLQEKSRRTRGWFLRT*RSRRER Trigger: CCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCA...TCCTCTGGTCCGCCTGGATTTCTCCTGTAACCGCATCTCCCGAATCCCCGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR TCA 72 bp | CCACCTCTTGCTGCCACTGTCAACGCTGTGGAAGCCTaGGTCCAGGCCACCATCATAACGACGTCCCGGAAA | + |
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Preference number: 3 (lower is better) Translates to: PPLAATVNAVEA*VQATIITTSRK Trigger: TTTCCGGGACGTCGTTATGATGGTGGCCTGGACTCAGGCTTCCACAGCGTTGACAGTGGCAGCAAGAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR CCA 72 bp | GGAAGGTCTCCCAGCTCATCAGGCAGGGTACTGAGCTaGTTCCTTCGAACATTGAGATCCCGCAGGGAACGG | + |
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Preference number: 3 (lower is better) Translates to: GRSPSSSGRVLS*FLRTLRSRRER Trigger: CCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCAGCTCAGTACCCTGCCTGATGAGCTGGGAGACCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR TCA 72 bp | CCAGGAGCCGAGTGTAGACGACATAGAGCAGCAGCATaGAGACCACGTAGAAGAGGAGGAAGCCACCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: PGAECRRHRAAA*RPRRRGGSHPD Trigger: GTCTGGGTGGCTTCCTCCTCTTCTACGTGGTCTTCATGCTGCTGCTCTATGTCGTCTACACTCGGCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
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| 3UTR GCA 72 bp | CTGCCCCATACCTGGGGACAAATGACACATAGAAGCTaGCAGCAGGTAACAGACGGGTGGTTAACACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LPHTWGQMTHRS*QQVTDGWLTQG Trigger: CCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATGTGTCATTTGTCCCCAGGTATGGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR CCA 72 bp | CCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTaGGACAGGAGAGGCCTGTCATTTCCAAAGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: PAGNRRVVNTGD*DRRGLSFPKGK Trigger: CTTTCCCTTTGGAAATGACAGGCCTCTCCTGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR CCA 72 bp | ATGACACATAGAAGCTGCCAGCAGGTAACAGACGGGTaGTTAACACAGGGGACTGGGACAGGAGAGGCCTGT | + |
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Preference number: 3 (lower is better) Translates to: MTHRSCQQVTDG*LTQGTGTGEAC Trigger: ACAGGCCTCTCCTGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATGTGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR-3UTR CAA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCGGGACACTAGTGTCTTaGGTAGGGCTGAAGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: QDHGHQVLVNWLGPGVICGTLVS*VGLKAP Trigger: TGGTGCCTTCAGCCCTACCAAAGACACTAGTGTCCC...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR-3UTR CAA 90 bp | TACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCTCCAAAGGGAAAGGCTaGCACAGGCAGGTAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: YTQDHGHQVLVNWLGPGVSKGKG*HRQVAQ Trigger: CTGGGCTACCTGCCTGTGCAAGCCTTTCCCTTTGGA...GACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
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| 3UTR TCA 72 bp | CGGCTCCCCTCCGGCCAGCTTCCATTGTTAGGTACTTaGAGATGTGAAGTTTCCCCTTCAGGCATATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: RLPSGQLPLLGT*RCEVSPSGISG Trigger: CCCAGATATGCCTGAAGGGGAAACTTCACATCTTCAAGTACCTAACAATGGAAGCTGGCCGGAGGGGAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
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| 3UTR GCA 72 bp | AATCATCTGTGGACTCATTTCCTGACCACCTCTTGCTaGCACTGTCAACGCTGTGGAAGCCTGAGTCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NHLWTHFLTTSC*HCQRCGSLSPG Trigger: GCCTGGACTCAGGCTTCCACAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAAATGAGTCCACAGATGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| 3UTR CCA 72 bp | TTTTTATTGTGTTTGACACAACGCTCTTCACCCAGATaGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLLCLTQRSSPR*GLYPKQPKGRG Trigger: CCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTGTCAAACACAATAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| 3UTR TCA 72 bp | ACTAGTGTCTTTGGTAGGGCTGAAGGCACCACCGGTTaGACAGGAGGTCTTATAAATAGAAGGTGGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSVFGRAEGTTG*TGGLINRRWGR Trigger: CCTTCCCCACCTTCTATTTATAAGACCTCCTGTTCAACCGGTGGTGCCTTCAGCCCTACCAAAGACACTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176768.2 |
||
| 3UTR TCA 72 bp | CAACCTACAGGCCTTTGGGCTTCTTTTTATTGTGTTTaGCACAACGCTCTTCACCCAGATGGGGGCTGTACC | + |
|
Preference number: 3 (lower is better) Translates to: QPTGLWASFYCV*HNALHPDGGCT Trigger: GGTACAGCCCCCATCTGGGTGAAGAGCGTTGTGTCAAACACAATAAAAAGAAGCCCAAAGGCCTGTAGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| 3UTR GCA 72 bp | AAAAATCATCTGTGGACTCATTTCCTGACCACCTCTTaGTGCCACTGTCAACGCTGTGGAAGCCTGAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KNHLWTHFLTTS*CHCQRCGSLSP Trigger: TGGACTCAGGCTTCCACAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAAATGAGTCCACAGATGATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR CCA 90 bp | CACCCAGACCAGAGGAGGGCTGGACTGGGAGAGGGGCCTTGCCCCCAACCAGGAGAGCGGGGCCGCAGCTaGTTCGCCAGCTGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPDQRRAGLGEGPCPQPGERGRS*FASWQR Trigger: CCTTTGCCAGCTGGCGAACCAGCTGCGGCCCCGCTC...TCCTGGTTGGGGGCAAGGCCCCTCTCCCAGTCCAGCCCTCCTCTGGTCTGGGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGATCACAGCCTCCAGGACGGTCTGCAGCCCCTGGGCGGTGCCCCGGAGGACGGGCCTTCCCACCCTaGCCTCACAAACCAGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PGSQPPGRSAAPGRCPGGRAFPP*PHKPGQ Trigger: TTGTCCTGGTTTGTGAGGGCAGGGTGGGAAGGCCCG...TCCTCCGGGGCACCGCCCAGGGGCTGCAGACCGTCCTGGAGGCTGTGATCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
||
| 3UTR CAA 72 bp | CCCAGACCAGAGGAGGGCTGGACTGGGAGAGGGGCCTaGCCCCCAACCAGGATCACAGCCTCCAGGACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PRPEEGWTGRGA*PPTRITASRTV Trigger: GACCGTCCTGGAGGCTGTGATCCTGGTTGGGGGCAAGGCCCCTCTCCCAGTCCAGCCCTCCTCTGGTCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
||
| CDS-3UTR CCA 90 bp | CAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGGAGCGGGGCCGCAGCTaGTTCGCCAGCTGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRSSPRWGLYPKQPKGRGERGRS*FASWQR Trigger: CCTTTGCCAGCTGGCGAACCAGCTGCGGCCCCGCTC...CCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAACGGTCTGCAGCCCCTaGGCGGTGCCCCGGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDGGCTRSSLRAGGYPRPTVCSP*AVPRRR Trigger: TCTCCTCCGGGGCACCGCCCAGGGGCTGCAGACCGT...TGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR GCA 90 bp | AGGGACACCAGCTGGCAAGCTGCCTCAGGCACCTCGGGAAACCGGTTCCGAGACGCGCCCCGGGGGAAGTaGTTCAAACGCCGGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RDTSWQAASGTSGNRFRDAPRGK*FKRRLD Trigger: GTCCAACCGGCGTTTGAAGCACTTCCCCCGGGGCGC...GTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGAGCGGGGCCGCAGCTaGTTCGCCAGCTGGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDGGCTRSSLRAGGYPRPERGRS*FASWQR Trigger: CCTTTGCCAGCTGGCGAACCAGCTGCGGCCCCGCTC...TGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | CACAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGCGCCCCGGGGGAAGTaGTTCAAACGCCGGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNALHPDGGCTRSSLRAGAPRGK*FKRRLD Trigger: GTCCAACCGGCGTTTGAAGCACTTCCCCCGGGGCGC...CCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | GTCATCTGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCCAGCAGAACGACCTaGAGGTGCCTGAGGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VICSQDRSDGSWGPEPPTSSRTT*RCLRRQ Trigger: CTGCCGCCTCAGGCACCTGCAGGTCGTTCTGCTGGA...GGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGATGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACAGGAGAGCAGCCCCTGGGCGGTaGCCCGGAGGAGATCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLPAGNRRVVNTGDWDRRAAPGR*PGGDPR Trigger: CCTCGGATCTCCTCCGGGGCACCGCCCAGGGGCTGC...TCTCCTGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR TCA 90 bp | AGGGACACCAGCTGGCAAGCTGCCTCAGGCACCTCGGGAAACCGGTTCCGAGACCAAGAGTCCACTCACTaGGACAGAGCCCAGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDTSWQAASGTSGNRFRDQESTH*DRAQPG Trigger: CCCAGGCTGGGCTCTGTCTCAGTGAGTGGACTCTTG...GTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR GCA 90 bp | ACACAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGCGCCCCGGGGGAAGTaGTTCAAACGCCGGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TQRSSPRWGLYPKQPKGRAPRGK*FKRRLD Trigger: GTCCAACCGGCGTTTGAAGCACTTCCCCCGGGGCGC...CCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTAGGTGTGGGAGCTCCCTaGCCCCCTGAAACTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GGCTRSSLRAGGYPRPVLGVGAP*PPETPS Trigger: ACTGGGAGTTTCAGGGGGGCAGGGAGCTCCCACACC...TAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | CACCAGCTGGCAAGCTGCCTCAGGCACCTCGGGAAACCGGTTCCGAGACAAGTCAGTTCAGGGTCCCGGTaGCCACAGCCTCCTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQLASCLRHLGKPVPRQVSSGSR*PQPPLG Trigger: CCCTAGAGGAGGCTGTGGCCACCGGGACCCTGAACT...GACTTGTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR CCA 90 bp | CACAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGTCCAGGGACACCAGCTaGCAAGCTGCCTCAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HNALHPDGGCTRSSLRAGSRDTS*QAASGT Trigger: GGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCCTGGA...CCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | TCCAAAGGGAAAGGCTTGCACAGGCAGGTAGCCCAGGCAGGACAAGACCTGGCTAGAGGAGGGCTGGACTaGGAGAGGGGCCTTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKGKGLHRQVAQAGQDLARGGLD*ERGLAP Trigger: GGGGGCAAGGCCCCTCTCCCAGTCCAGCCCTCCTCT...AGCCAGGTCTTGTCCTGCCTGGGCTACCTGCCTGTGCAAGCCTTTCCCTTTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR TCA 90 bp | CAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGAGCCTGGGTGATGTCTaGCAAGTCGTAACTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRSSPRWGLYPKQPKGRGSLGDV*QVVTAG Trigger: GCCCGCAGTTACGACTTGTCAGACATCACCCAGGCT...CCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | GGGGATTCGGGAGATGCGGTTACAGGAGAAATCCAGGCGGACCAGAGGAAGGTCGCGCCCCGGGGGAAGTaGTTCAAACGCCGGTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDSGDAVTGEIQADQRKVAPRGK*FKRRLD Trigger: GTCCAACCGGCGTTTGAAGCACTTCCCCCGGGGCGC...GACCTTCCTCTGGTCCGCCTGGATTTCTCCTGTAACCGCATCTCCCGAATCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR GCA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCGCCTCCAGGACGGTCTaGAGCCCCTGGGCGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QDHGHQVLVNWLGPGVICASRTV*SPWAVP Trigger: GGGCACCGCCCAGGGGCTGCAGACCGTCCTGGAGGC...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGTCGCCTGCTGCTAGATaGCTTCTCCACATCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRSSPRWGLYPKQPKGRGSPAAR*LLHIPC Trigger: GCAGGGGATGTGGAGAAGCCATCTAGCAGCAGGCGA...CCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGTAGAGGCTCAGGCCTTCCACTTCAGCACACAGTaGGCCTGCACCCGGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQGWVQAFQAIVVEAQAFHFSTQ*ACTRGS Trigger: GCTCCCCCGGGTGCAGGCTCACTGTGTGCTGAAGTG...GAAGGCCTGAGCCTCTACCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR GCA 90 bp | CACAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGTCCACGGGCAGGGACTaGAGCTCATTGCTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HNALHPDGGCTRSSLRAGSTGRD*SSLLLT Trigger: TGTGAGCAGCAATGAGCTGCAGTCCCTGCCCGTGGA...CCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | CATAGAAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACACCGCCTCTCCTCCCCTaGAGGCTCCTCTCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HRSCQQVTDGWLTQGTGTPPLLP*RLLSPA Trigger: AGCAGGCGAGAGGAGCCTGCAGGGGAGGAGAGGCGG...TGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CTACACAGCTCCACGGGCAGGGACTGCAGCTCATTGCTGCTCACATCAAGCTGCAGTTCAGGGTCCCGGTaGCCACAGCCTCCTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSSTGRDCSSLLLTSSCSSGSR*PQPPLG Trigger: CCCTAGAGGAGGCTGTGGCCACCGGGACCCTGAACT...GCAGCTTGATGTGAGCAGCAATGAGCTGCAGTCCCTGCCCGTGGAGCTGTGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCTAGCTTCAAACGCCGGTTaGACAAGTTCAGGGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPRTGPMVVGAQSPQPLASNAG*TSSGSR Trigger: CCGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGC...TAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | CCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCACCACTGTCAACGCTGTaGAAGCCTGAGTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PDGGCTRSSLRAGGYPRPPLSTL*KPESRP Trigger: TGGCCTGGACTCAGGCTTCCACAGCGTTGACAGTGG...TGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACAGGAGAGTGGGCCATTGCAGGTaGCCTGTGTGGATGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KLPAGNRRVVNTGDWDRRVGHCR*PVWMGP Trigger: CGGCCCCATCCACACAGGCCACCTGCAATGGCCCAC...TCTCCTGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACACTGGAGCCCAGGGGCCTaGGAACAGGAGCTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LYPKQPKGRGISKASATHWSPGA*EQELSL Trigger: CAGTGACAGCTCCTGTTCCCAGGCCCCTGGGCTCCA...GTGTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | GGGACACCAGCTGGCAAGCTGCCTCAGGCACCTCGGGAAACCGGTTCCGAGACAGGGCTCCAACAAGACTaGAGAAGGCAGAGAGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTPAGKLPQAPRETGSETGLQQD*RRQRGD Trigger: ATCCCCTCTCTGCCTTCTCCAGTCTTGTTGGAGCCC...TGTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| 3UTR CAA 72 bp | AGGCTACACAGCTCCACGGGCAGGGACTGCAGCTCATaGCTGCTCACATCAAGCTGCCGCAGGCTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLHSSTGRDCSS*LLTSSCRRLPK Trigger: CTTGGGAAGCCTGCGGCAGCTTGATGTGAGCAGCAATGAGCTGCAGTCCCTGCCCGTGGAGCTGTGTAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR TCA 90 bp | ACACAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGAAGCTGTTTGGTCTCTaGATGGAGCCCAGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQRSSPRWGLYPKQPKGRKLFGL*MEPRGL Trigger: CAGGCCCCTGGGCTCCATTCAGAGACCAAACAGCTT...CCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGGAGGACAGCAGCGATGTaGGGGAGGCCCCTTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MVTKSLLIGWAQVSSAPRRTAAM*GRPLPG Trigger: CCCTGGAAGGGGCCTCCCTCACATCGCTGCTGTCCT...CCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | GACGGGTGGTTAACACAGGGGACTGGGACAGGAGAGGCCTGTCATTTCCAAAGGAGTTCAGGGTCCCGGTaGCCACAGCCTCCTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGWLTQGTGTGEACHFQRSSGSR*PQPPLG Trigger: CCCTAGAGGAGGCTGTGGCCACCGGGACCCTGAACT...CCTTTGGAAATGACAGGCCTCTCCTGTCCCAGTCCCCTGTGTTAACCACCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | TACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACACAAGTCCAGGGACACCAGCTaGCAAGCTGCCTCAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YPKQPKGRGISKASATHKSRDTS*QAASGT Trigger: GGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCCTGGA...CTTGTGTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAACGGAGGCTACACAGCTCCACGGGCAGGGACTGCAGCTCATTGCTGCTCCTGGCAGATGTAGGGTaGCAACGACGACAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RERRLHSSTGRDCSSLLLLADVG*QRRQLV Trigger: AACCAGCTGTCGTCGTTGCCACCCTACATCTGCCAG...GAGCAGCAATGAGCTGCAGTCCCTGCCCGTGGAGCTGTGTAGCCTCCGTTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR CCA 90 bp | CCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCACCCTTCAGGCATATCTaGGCAGGTGGACTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PDGGCTRSSLRAGGYPRPPFRHI*AGGLCR Trigger: CCTACAGAGTCCACCTGCCCAGATATGCCTGAAGGG...TGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | ATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGGGTGGGCCATTGCAGGTaGCCTGTGTGGATGGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MVTKSLLIGWAQVSSAPRVGHCR*PVWMGP Trigger: CGGCCCCATCCACACAGGCCACCTGCAATGGCCCAC...CCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | CACCAGCTGGCAAGCTGCCTCAGGCACCTCGGGAAACCGGTTCCGAGACAAGTCAGACAGAGCCCAGCCTaGGTGATGTCTGACAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HQLASCLRHLGKPVPRQVRQSPA*VMSDKS Trigger: CGACTTGTCAGACATCACCCAGGCTGGGCTCTGTCT...GACTTGTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCCTTCGAACATTGAGATCCCGCAGGGAACGGAGGCTACACAGCTCCACCCCTGGCAAGGACACTaGAGCTGCAGCTTCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVPSNIEIPQGTEATQLHPWQGH*SCSFLT Trigger: GGTGAGGAAGCTGCAGCTTCAGTGTCCTTGCCAGGG...GTGGAGCTGTGTAGCCTCCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGAAGTGCGTGAAGGACAGCAGCGATGTGAGGGAGGCCCCTTCCAGGGGCTGTGGACTCATTTCCTaGCCACCTCTTGCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FQKCVKDSSDVREAPSRGCGLIS*PPLAAT Trigger: AGTGGCAGCAAGAGGTGGTCAGGAAATGAGTCCACA...GCCCCTGGAAGGGGCCTCCCTCACATCGCTGCTGTCCTTCACGCACTTCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR TCA 90 bp | GGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTATGTGGACTCATTTCCTaGCCACCTCTTGCTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GGCTRSSLRAGGYPRPVLCGLIS*PPLAAT Trigger: AGTGGCAGCAAGAGGTGGTCAGGAAATGAGTCCACA...TAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGGGCAACGTGGGTCCTAGGAGCCCAGGAGCCGAGTGTAGACGACATAGAGCTTTGGCACAGCAGGTaGGGGCACATGAATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGATWVLGAQEPSVDDIELWHSR*GHMNEG Trigger: CCCTTCATTCATGTGCCCTCACCTGCTGTGCCAAAG...CTCTATGTCGTCTACACTCGGCTCCTGGGCTCCTAGGACCCACGTTGCCCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCTAGACTCTGTAGGGGGTTaGTATCCAGCAGAACGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SAPRTGPMVVGAQSPQPLDSVGG*YPAERP Trigger: AGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTC...TAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | ACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCACCGCCTCTCCTCCCCTaGAGGCTCCTCTCGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: THKTMVTKSLLIGWAQVSPPLLP*RLLSPA Trigger: AGCAGGCGAGAGGAGCCTGCAGGGGAGGAGAGGCGG...TGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | CATAGAAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACACTGGGAGAGGGGCCTTaGCCCCAACCAGGATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HRSCQQVTDGWLTQGTGTLGEGP*PQPGSQ Trigger: CTGTGATCCTGGTTGGGGGCAAGGCCCCTCTCCCAG...TGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | ACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGTTCAGGGTCCCGGTaGCCACAGCCTCCTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TMVTKSLLIGWAQVSSAPSSGSR*PQPPLG Trigger: CCCTAGAGGAGGCTGTGGCCACCGGGACCCTGAACT...GGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | TGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCTACCGGCAGGGTACTGAGCTaGTTCCTTCGAACATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSQDRSDGSWGPEPPTSTGRVLS*FLRTLR Trigger: TCTCAATGTTCGAAGGAACCAGCTCAGTACCCTGCC...GGTAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCAACCTCTACCCCTAAGGCTGTTCCAGAAGTGCGTGAAGGACAGCAGCGAAACGCTGTGGAAGCCTaGGTCCAGGCCACCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: PPTSTPKAVPEVREGQQRNAVEA*VQATII Trigger: TATGATGGTGGCCTGGACTCAGGCTTCCACAGCGTT...TCGCTGCTGTCCTTCACGCACTTCTGGAACAGCCTTAGGGGTAGAGGTTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR TCA 90 bp | TGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCTACCCCGGAAAGACAGCTCTaGAAAATCATCTGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CSQDRSDGSWGPEPPTSTPERQL*KIICGL Trigger: GAGTCCACAGATGATTTTTCAGAGCTGTCTTTCCGG...GGTAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | CTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACACCTTTGGCACAGCAGGTaGGGGCACATGAATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYPKQPKGRGISKASATHLWHSR*GHMNEG Trigger: CCCTTCATTCATGTGCCCTCACCTGCTGTGCCAAAG...GTGTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGTAGAGGCTCAGGCCTTCCCTGGGCCGGAATGTTaGAGGAGGAGATTGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQGWVQAFQAIVVEAQAFPGPEC*RRRLGW Trigger: CCAACCCAATCTCCTCCTTCAACATTCCGGCCCAGG...GAAGGCCTGAGCCTCTACCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGGCACCAGCTGGCAAGCTaGCTCAGGCACCTCGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MVTKSLLIGWAQVSSAPRHQLAS*LRHLGK Trigger: TTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTG...CCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | GGGACACTAGTGTCTTTGGTAGGGCTGAAGGCACCACCGGTTGAACAGGAGGTCCTGCTCACATCAAGCTaGCGCAGGCTTCCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTLVSLVGLKAPPVEQEVLLTSS*RRLPKV Trigger: CACCTTGGGAAGCCTGCGGCAGCTTGATGTGAGCAG...GACCTCCTGTTCAACCGGTGGTGCCTTCAGCCCTACCAAAGACACTAGTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR GCA 90 bp | CCCCCAACCTCTACCCCTAAGGCTGTTCCAGAAGTGCGTGAAGGACAGCAGCGAGGGACTGCAGCTCATTaGTGCTCACATCAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPTSTPKAVPEVREGQQRGTAAH*CSHQAA Trigger: GGCAGCTTGATGTGAGCAGCAATGAGCTGCAGTCCC...TCGCTGCTGTCCTTCACGCACTTCTGGAACAGCCTTAGGGGTAGAGGTTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR GCA 90 bp | GGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACTTCCTGACCACCTCTTaGTGCCACTGTCAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GCTRSSLRAGGYPRPVLHFLTTS*CHCQRC Trigger: ACAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAA...GTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCTAAATTCAGAAGGCAGCTaGTCCTCAGCTGCACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SAPRTGPMVVGAQSPQPLNSEGS*SSAALR Trigger: TCGAAGTGCAGCTGAGGAGCAGCTGCCTTCTGAATT...TAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | ACACAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGAGGCTGTTCCAGAAGTaGGTGAAGGACAGCAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQRSSPRWGLYPKQPKGRRLFQK*VKDSSD Trigger: ATCGCTGCTGTCCTTCACGCACTTCTGGAACAGCCT...CCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | TCTGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCTAAAGATTCCCCAAGGCTaGGTTCAGGCATTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SAPRTGPMVVGAQSPQPLKIPQG*VQAFQA Trigger: TGCCTGAAATGCCTGAACCCAGCCTTGGGGAATCTT...TAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCAGACCAGAGGAGGGCTaGACTGGGAGAGGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QDHGHQVLVNWLGPGVICRPEEG*TGRGAL Trigger: CAAGGCCCCTCTCCCAGTCCAGCCCTCCTCTGGTCT...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CATATCTGGGCAGGTGGACTCTGTAGGGGGTTGCTATCCAGCAGAACGACCTGCCTGGTTCCGGCAGCCTaGGTGATGTCTGACAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HIWAGGLCRGLLSSRTTCLVPAA*VMSDKS Trigger: CGACTTGTCAGACATCACCCAGGCTGCCGGAACCAG...GCAGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTCCACCTGCCCAGATATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| 3UTR CAA 72 bp | TTCAGGCATATCTGGGCAGGTGGACTCTGTAGGGGGTaGCTATCCAGCAGAACGACCTGCAGGTGCCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRHIWAGGLCRG*LSSRTTCRCLR Trigger: CCTCAGGCACCTGCAGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTCCACCTGCCCAGATATGCCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGGCTGTAAGATTCCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGCCCTGGCAAGGACACTaGAGCTGCAGCTTCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: VRAVRFPKAGFRHFRQLWPWQGH*SCSFLT Trigger: GGTGAGGAAGCTGCAGCTTCAGTGTCCTTGCCAGGG...CCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGGAATCTTACAGCCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGTAGAGGCTCAGGCCTTCAGAGCCCAGCCTGGGTaGTGTCTGACAAGTCGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQGWVQAFQAIVVEAQAFRAQPG*CLTSRN Trigger: GTTACGACTTGTCAGACATCACCCAGGCTGGGCTCT...GAAGGCCTGAGCCTCTACCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR GCA 90 bp | CTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACACGACTCTGTAGGGGGTTaGTATCCAGCAGAACGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LYPKQPKGRGISKASATHDSVGG*YPAERP Trigger: AGGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTC...GTGTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | TACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACACAAGCTGACCACCTCTTGCTaGCACTGTCAACGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YPKQPKGRGISKASATHKLTTSC*HCQRCG Trigger: TCCACAGCGTTGACAGTGGCAGCAAGAGGTGGTCAG...CTTGTGTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | TACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCGGTGTGGGAGCTCCCTaGCCCCCTGAAACTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YTQDHGHQVLVNWLGPGVGVGAP*PPETPS Trigger: ACTGGGAGTTTCAGGGGGGCAGGGAGCTCCCACACC...GACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCTACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGTGGAGCCCAGGGGCCTaGGAACAGGAGCTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SATHKTMVTKSLLIGWAQWSPGA*EQELSL Trigger: CAGTGACAGCTCCTGTTCCCAGGCCCCTGGGCTCCA...CTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| 3UTR CAA 72 bp | TCTGAGGTCAGCGTTGGTGAGGGGACACTAGTGTCTTaGGTAGGGCTGAAGGCACCACCGGTTGAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSVGEGTLVS*VGLKAPPVEQE Trigger: CTCCTGTTCAACCGGTGGTGCCTTCAGCCCTACCAAAGACACTAGTGTCCCCTCACCAACGCTGACCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| 3UTR CAA 72 bp | TCATCAGGCAGGGTACTGAGCTGGTTCCTTCGAACATaGAGATCCCGCAGGGAACGGAGGCTACACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSGRVLSWFLRT*RSRRERRLHSS Trigger: GGAGCTGTGTAGCCTCCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCAGCTCAGTACCCTGCCTGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTCCCTGGCAAGGACACTaGAGCTGCAGCTTCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HKTMVTKSLLIGWAQVSSPWQGH*SCSFLT Trigger: GGTGAGGAAGCTGCAGCTTCAGTGTCCTTGCCAGGG...AGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGCCCTGGCAAGGACACTaGAGCTGCAGCTTCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SATHKTMVTKSLLIGWAQPWQGH*SCSFLT Trigger: GGTGAGGAAGCTGCAGCTTCAGTGTCCTTGCCAGGG...CTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | CATAGAAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACAGGTTCCTTCGAACATTaGGATCCCGCAGGGAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRSCQQVTDGWLTQGTGTGSFEH*DPAGNG Trigger: TCCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACC...TGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR TCA 90 bp | ACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCGGTTCCTTCGAACATTaGGATCCCGCAGGGAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMVTKSLLIGWAQVSSAPGSFEH*DPAGNG Trigger: TCCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACC...GGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | GTCATCTGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCCCATTGTTAGGTACTTaGAGATGTGAAGTTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VICSQDRSDGSWGPEPPTPLLGT*RCEVSP Trigger: AGGGGAAACTTCACATCTTCAAGTACCTAACAATGG...GGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGATGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | ATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGGAACGCTGTGGAAGCCTaGGTCCAGGCCACCATCATA | + |
|
Preference number: 4 (lower is better) Translates to: MVTKSLLIGWAQVSSAPRNAVEA*VQATII Trigger: TATGATGGTGGCCTGGACTCAGGCTTCCACAGCGTT...CCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | GACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCTTTGGCACAGCAGGTaGGGGCACATGAATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DHGHQVLVNWLGPGVICSLWHSR*GHMNEG Trigger: CCCTTCATTCATGTGCCCTCACCTGCTGTGCCAAAG...GGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | TCCAAGGCCAGTGCTACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTCCAGCAGAACGACCTaGAGGTGCCTGAGGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKASATHKTMVTKSLLIGSSRTT*RCLRRQ Trigger: CTGCCGCCTCAGGCACCTGCAGGTCGTTCTGCTGGA...GCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACTGGCCTTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | GGGACACTAGTGTCTTTGGTAGGGCTGAAGGCACCACCGGTTGAACAGGAGGTCCGAGACAAGTCAGCCTaGGTGATGTCTGACAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GTLVSLVGLKAPPVEQEVRDKSA*VMSDKS Trigger: CGACTTGTCAGACATCACCCAGGCTGACTTGTCTCG...GACCTCCTGTTCAACCGGTGGTGCCTTCAGCCCTACCAAAGACACTAGTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACACAAGATTCCCCAAGGCTaGGTTCAGGCATTTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LYPKQPKGRGISKASATHKIPQG*VQAFQA Trigger: TGCCTGAAATGCCTGAACCCAGCCTTGGGGAATCTT...GTGTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCGCCTGCTGCTAGATaGCTTCTCCACATCCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QDHGHQVLVNWLGPGVICSPAAR*LLHIPC Trigger: GCAGGGGATGTGGAGAAGCCATCTAGCAGCAGGCGA...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | TACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCTCTTCCAGGATGTGGTaGGGCTGGCACAGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTQDHGHQVLVNWLGPGVSSRMW*GWHRDS Trigger: GGAGTCCCTGTGCCAGCCCCACCACATCCTGGAAGA...GACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGGGCTGTAAGATTCCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGGGAGCTAGGAGGGGCTaGGAGGGCTTGGTAGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRAVRFPKAGFRHFRQLWGARRG*EGLVVF Trigger: GAAAACTACCAAGCCCTCCCAGCCCCTCCTAGCTCC...CCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGGAATCTTACAGCCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| 3UTR CAA 72 bp | GCCAGTGCTACACACAAGACCATGGTCACCAAGTCCTaGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASATHKTMVTKS*LIGWAQVSSAP Trigger: GGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | CCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCACCATTGTTAGGTACTTaGAGATGTGAAGTTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PDGGCTRSSLRAGGYPRPPLLGT*RCEVSP Trigger: AGGGGAAACTTCACATCTTCAAGTACCTAACAATGG...TGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTCTGCTCACATCAAGCTaGCGCAGGCTTCCCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HKTMVTKSLLIGWAQVSSLLTSS*RRLPKV Trigger: CACCTTGGGAAGCCTGCGGCAGCTTGATGTGAGCAG...AGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | AAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTTCCACGGGCAGGGACTaGAGCTCATTGCTGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KTMVTKSLLIGWAQVSSASTGRD*SSLLLT Trigger: TGTGAGCAGCAATGAGCTGCAGTCCCTGCCCGTGGA...AGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCAGGCGGGGATTCGGGAGATaGGGTTACAGGAGAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MVTKSLLIGWAQVSSAPRRGFGR*GYRRNP Trigger: TGGATTTCTCCTGTAACCGCATCTCCCGAATCCCCG...CCTGGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | GTTAACACAGGGGACTGGGACAGGAGAGGCCTGTCATTTCCAAAGGGAAAGGCTACTTTGGTGGGCCATTaGAGGTGGCCTGTGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VNTGDWDRRGLSFPKGKATLVGH*RWPVWM Trigger: CATCCACACAGGCCACCTGCAATGGCCCACCAAAGT...AGCCTTTCCCTTTGGAAATGACAGGCCTCTCCTGTCCCAGTCCCCTGTGTTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCCTGGCAGATGTAGGGTaGCAACGACGACAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QDHGHQVLVNWLGPGVICLADVG*QRRQLV Trigger: AACCAGCTGTCGTCGTTGCCACCCTACATCTGCCAG...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAGGGTAAGGGTATTGTGGGTATGAGAGTGGGGCTTCTGAGGTCAGCGTTGGGTAGTGCTGGACTTTaGTGGGCCATTGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TKGKGIVGMRVGLLRSALGSAGL*WAIAGG Trigger: GCCACCTGCAATGGCCCACCAAAGTCCAGCACTACC...CAACGCTGACCTCAGAAGCCCCACTCTCATACCCACAATACCCTTACCCTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | ACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCAGGTAGTGCTGGACTTTaGTGGGCCATTGCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: THKTMVTKSLLIGWAQVSGSAGL*WAIAGG Trigger: GCCACCTGCAATGGCCCACCAAAGTCCAGCACTACC...TGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAGGGCTGTAAGATTCCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGTTGAAGGAGGAGATTaGGTTGGGGCAGGAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGCKIPQGWVQAFQAIVVEGGD*VGAGAR Trigger: CCTAGCTCCTGCCCCAACCCAATCTCCTCCTTCAAC...CACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGGAATCTTACAGCCCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCCATCAGGCAGGGTACTaGGCTGGTTCCTTCGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QDHGHQVLVNWLGPGVICHQAGY*AGSFEH Trigger: ATGTTCGAAGGAACCAGCTCAGTACCCTGCCTGATG...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCTACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGGGACTGCAGCTCATTaGTGCTCACATCAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SATHKTMVTKSLLIGWAQGTAAH*CSHQAA Trigger: GGCAGCTTGATGTGAGCAGCAATGAGCTGCAGTCCC...CTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | GTTAACACAGGGGACTGGGACAGGAGAGGCCTGTCATTTCCAAAGGGAAAGGCTCGGGGATTCGGGAGATaGGGTTACAGGAGAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNTGDWDRRGLSFPKGKARGFGR*GYRRNP Trigger: TGGATTTCTCCTGTAACCGCATCTCCCGAATCCCCG...AGCCTTTCCCTTTGGAAATGACAGGCCTCTCCTGTCCCAGTCCCCTGTGTTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | ACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCGGCAGGGTACTGAGCTaGTTCCTTCGAACATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TMVTKSLLIGWAQVSSAPGRVLS*FLRTLR Trigger: TCTCAATGTTCGAAGGAACCAGCTCAGTACCCTGCC...GGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | AAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCTTCAGGCATATCTaGGCAGGTGGACTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTMVTKSLLIGWAQVSSAPFRHI*AGGLCR Trigger: CCTACAGAGTCCACCTGCCCAGATATGCCTGAAGGG...AGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACCTGAAAAATCATCTGTaGACTCATTTCCTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GCTRSSLRAGGYPRPVLHLKNHL*THFLTT Trigger: GGTGGTCAGGAAATGAGTCCACAGATGATTTTTCAG...GTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | CATAGAAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACACCTGAAACTCCCAGTTaGGTAGTGCTGGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRSCQQVTDGWLTQGTGTPETPS*VVLDFG Trigger: ACCAAAGTCCAGCACTACCCAACTGGGAGTTTCAGG...TGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR TCA 90 bp | CACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTCATCAGGCAGGGTACTaGGCTGGTTCCTTCGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HKTMVTKSLLIGWAQVSSHQAGY*AGSFEH Trigger: ATGTTCGAAGGAACCAGCTCAGTACCCTGCCTGATG...AGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | CACACAGAGGTGACAATCTATACAGTTTATACACAGAGCCAGGGGCCCATACTGAAGCTGTTTGGTCTCTaGATGGAGCCCAGGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTEVTIYTVYTQSQGPILKLFGL*MEPRGL Trigger: CAGGCCCCTGGGCTCCATTCAGAGACCAAACAGCTT...CAGTATGGGCCCCTGGCTCTGTGTATAAACTGTATAGATTGTCACCTCTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR GCA 90 bp | TACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCTTCCTGACCACCTCTTaGTGCCACTGTCAACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTQDHGHQVLVNWLGPGVFLTTS*CHCQRC Trigger: ACAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAA...GACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGACAAATGACACATAGAAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACTGGCAGATGTAGGGTaGCAACGACGACAGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WGQMTHRSCQQVTDGWLTLADVG*QRRQLV Trigger: AACCAGCTGTCGTCGTTGCCACCCTACATCTGCCAG...TGTTAACCACCCGTCTGTTACCTGCTGGCAGCTTCTATGTGTCATTTGTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CACACAGAGGTGACAATCTATACAGTTTATACACAGAGCCAGGGGCCCATACTGCCACTGTCAACGCTGTaGAAGCCTGAGTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTEVTIYTVYTQSQGPILPLSTL*KPESRP Trigger: TGGCCTGGACTCAGGCTTCCACAGCGTTGACAGTGG...CAGTATGGGCCCCTGGCTCTGTGTATAAACTGTATAGATTGTCACCTCTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR GCA 90 bp | ACTAAGGGTAAGGGTATTGTGGGTATGAGAGTGGGGCTTCTGAGGTCAGCGTTGAATTCAGAAGGCAGCTaGTCCTCAGCTGCACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TKGKGIVGMRVGLLRSALNSEGS*SSAALR Trigger: TCGAAGTGCAGCTGAGGAGCAGCTGCCTTCTGAATT...CAACGCTGACCTCAGAAGCCCCACTCTCATACCCACAATACCCTTACCCTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCCAGCAGGTAACAGACGGGTGGTTAACACAGGGGACTGGGACAGGAGACTGAAAAATCATCTGTaGACTCATTTCCTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: KLPAGNRRVVNTGDWDRRLKNHL*THFLTT Trigger: GGTGGTCAGGAAATGAGTCCACAGATGATTTTTCAG...TCTCCTGTCCCAGTCCCCTGTGTTAACCACCCGTCTGTTACCTGCTGGCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CCA 90 bp | CACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTCCTGAAACTCCCAGTTaGGTAGTGCTGGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKTMVTKSLLIGWAQVSSPETPS*VVLDFG Trigger: ACCAAAGTCCAGCACTACCCAACTGGGAGTTTCAGG...AGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| 3UTR CAA 72 bp | GAAAAATCATCTGTGGACTCATTTCCTGACCACCTCTaGCTGCCACTGTCAACGCTGTGGAAGCCTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKSSVDSFPDHL*LPLSTLWKPES Trigger: GGACTCAGGCTTCCACAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAAATGAGTCCACAGATGATTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR TCA 90 bp | ACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCACCGGAAAGACAGCTCTaGAAAATCATCTGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: THKTMVTKSLLIGWAQVSPERQL*KIICGL Trigger: GAGTCCACAGATGATTTTTCAGAGCTGTCTTTCCGG...TGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR GCA 90 bp | GGACCAACCTACAGGCCTTTGGGCTTCTTTTTATTGTGTTTGACACAACGCTCTACTTTGGTGGGCCATTaGAGGTGGCCTGTGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GPTYRPLGFFLLCLTQRSTLVGH*RWPVWM Trigger: CATCCACACAGGCCACCTGCAATGGCCCACCAAAGT...AGAGCGTTGTGTCAAACACAATAAAAAGAAGCCCAAAGGCCTGTAGGTTGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176667.8 |
||
| CDS-3UTR CCA 90 bp | GGACCAACCTACAGGCCTTTGGGCTTCTTTTTATTGTGTTTGACACAACGCTCTCGAGACAAGTCAGCCTaGGTGATGTCTGACAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPTYRPLGFFLLCLTQRSRDKSA*VMSDKS Trigger: CGACTTGTCAGACATCACCCAGGCTGACTTGTCTCG...AGAGCGTTGTGTCAAACACAATAAAAAGAAGCCCAAAGGCCTGTAGGTTGGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176667.8 |
||
| CDS-3UTR TCA 90 bp | GCCCATACTGGGCTCACATCCCCTGCTAATAGTTCTCTCTACAAAACAGAGATACATAGAGCAGCAGCATaGAGACCACGTAGAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHTGLTSPANSSLYKTEIHRAAA*RPRRRG Trigger: TCCTCTTCTACGTGGTCTTCATGCTGCTGCTCTATG...TATCTCTGTTTTGTAGAGAGAACTATTAGCAGGGGATGTGAGCCCAGTATGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS GCA 90 bp | CAACCAGGATCACAGCCTCCAGGACGGTCTGCAGCCCCTGGGCGGTaGCCCGGAGGAGATCCGAGGGCGAGCACAGGTCAGCCTCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPGSQPPGRSAAPGR*PGGDPRASTGQPQA Trigger: TGCCTGAGGCTGACCTGTGCTCGCCCTCGGATCTCCTCCGGGGCACCGCCCAGGGGCTGCAGACCGTCCTGGAGGCTGTGATCCTGGTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 |
||
| CDS GCA 90 bp | TGGTGGGCCATTGCAGGTGGCCTGTGTGGATGGGGCCGAAGCACCTaGCCCGGCAGCTCGGATCCCCCGCTTCAGGACGCTGTCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WWAIAGGLCGWGRST*PGSSDPPLQDAVLP Trigger: AGGAAGGACAGCGTCCTGAAGCGGGGGATCCGAGCTGCCGGGGCAGGTGCTTCGGCCCCATCCACACAGGCCACCTGCAATGGCCCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CCA 90 bp | CGTAACTGCGGGCCGCGCCCCGGGGGAAGTGCTTCAAACGCCGGTTaGACAAGTTCAGGGTCCCGGTGGCCACAGCCTCCTCTAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RNCGPRPGGSASNAG*TSSGSRWPQPPLGL Trigger: GAGCCCTAGAGGAGGCTGTGGCCACCGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGCACTTCCCCCGGGGCGCGGCCCGCAGTTACG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000176011.8 ENSMUST00000176667.8 ENSMUST00000177477.2 |
||
| CDS TCA 90 bp | AGGGTGGCAACGACGACAGCTGGTTCCGGCAGCCTGGGTGATGTCTaGCAAGTCGTAACTGCGGGCCGCGCCCCGGGGGAAGTGCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RVATTTAGSGSLGDV*QVVTAGRAPGEVLQ Trigger: TTGAAGCACTTCCCCCGGGGCGCGGCCCGCAGTTACGACTTGTCAGACATCACCCAGGCTGCCGGAACCAGCTGTCGTCGTTGCCACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS CCA 90 bp | GGGGGAAGTGCTTCAAACGCCGGTTGGACAAGTTCAGGGTCCCGGTaGCCACAGCCTCCTCTAGGGCTCGTTCTGCGCTACGGCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGSASNAGWTSSGSR*PQPPLGLVLRYGSQ Trigger: CTGGGAGCCGTAGCGCAGAACGAGCCCTAGAGGAGGCTGTGGCCACCGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGCACTTCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000176011.8 ENSMUST00000176667.8 ENSMUST00000177477.2 |
||
| CDS CCA 90 bp | TCAGCACACAGTGAGCCTGCACCCGGGGGAGCCCTAGCTGCACCCTaGGCCGGAATGTTGAAGGAGGAGATTGGGTTGGGGCAGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SAHSEPAPGGALAAP*AGMLKEEIGLGQEL Trigger: TAGCTCCTGCCCCAACCCAATCTCCTCCTTCAACATTCCGGCCCAGGGTGCAGCTAGGGCTCCCCCGGGTGCAGGCTCACTGTGTGCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS TCA 90 bp | CCCAAGAGTCCACTCACTGAGACAGAGCCCAGCCTGGGTGATGTCTaGCAAGTCGTAACTGCGGGCCGCGCCCCGGGGGAAGTGCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PKSPLTETEPSLGDV*QVVTAGRAPGEVLQ Trigger: TTGAAGCACTTCCCCCGGGGCGCGGCCCGCAGTTACGACTTGTCAGACATCACCCAGGCTGGGCTCTGTCTCAGTGAGTGGACTCTTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS TCA 90 bp | AAGACTGGAGAAGGCAGAGAGGGGATTTCCCACTTCAGCACACAGTaGGCCTGCACCCGGGGGAGCCCTAGCTGCACCCTGGGCCGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KTGEGREGISHFSTQ*ACTRGSPSCTLGRN Trigger: ATTCCGGCCCAGGGTGCAGCTAGGGCTCCCCCGGGTGCAGGCTCACTGTGTGCTGAAGTGGGAAATCCCCTCTCTGCCTTCTCCAGTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR CAA 90 bp | CAACGCTCTTCACCCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGTGCTTCAAACGCCGGTaGGACAAGTTCAGGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QRSSPRWGLYPKQPKGRGCFKRR*DKFRVP Trigger: CGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGCA...CCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGGGTGAAGAGCGTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | CCAGATGGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCACCCACTCTGTTGCTGTaGCTTCCGCTCCCGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PDGGCTRSSLRAGGYPRPPTLLL*LPLPFL Trigger: CAGGAACGGGAGCGGAAGCAACAGCAACAGAGTGGG...TGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCCATCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | GGGACACCAGCTGGCAAGCTGCCTCAGGCACCTCGGGAAACCGGTTCCGAGACAAGGGGCTGGGAGGGCTaGGTAGTTTTCCCAAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTPAGKLPQAPRETGSETRGWEG*VVFPRV Trigger: GACTCTTGGGAAAACTACCAAGCCCTCCCAGCCCCT...TGTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS GCA 90 bp | ATTGTGGTAGAGGCTCAGGCCTTCCAGGGACACCAGCTGGCAAGCTaGCTCAGGCACCTCGGGAAACCGGTTCCGAGACAAGTCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IVVEAQAFQGHQLAS*LRHLGKPVPRQVSL Trigger: CAGGCTGACTTGTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCCTGGAAGGCCTGAGCCTCTACCACAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS GCA 90 bp | ACTCCGTTGGCGAGAGCTTCTGCCAGGTCCTCAGGTAGGGGCTGCTaGAGCCGCGACTCTAGGACCTGGCGAAGTTGGGATATTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPLARASARSSGRGC*SRDSRTWRSWDISS Trigger: GGAGCTAATATCCCAACTTCGCCAGGTCCTAGAGTCGCGGCTGCAGCAGCCCCTACCTGAGGACCTGGCAGAAGCTCTCGCCAACGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS GCA 90 bp | AGGACTCCGTTGGCGAGAGCTTCTGCCAGGTCCTCAGGTAGGGGCTaGTGCAGCCGCGACTCTAGGACCTGGCGAAGTTGGGATATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTPLARASARSSGRG*CSRDSRTWRSWDIS Trigger: GCTAATATCCCAACTTCGCCAGGTCCTAGAGTCGCGGCTGCAGCAGCCCCTACCTGAGGACCTGGCAGAAGCTCTCGCCAACGGAGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCGGACCAGAGGAAGGTCTCCCAGCTCATCAGGCAGGGTACTGAGCTGGTTTGCTTCAAACGCCGGTaGGACAAGTTCAGGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QADQRKVSQLIRQGTELVCFKRR*DKFRVP Trigger: CGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGCA...AACCAGCTCAGTACCCTGCCTGATGAGCTGGGAGACCTTCCTCTGGTCCGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCTCCCAGGACAGGTCCGATGGTAGTTGGGGCCCAGAGCCCCCAACCTCTATGGTTCCTTCGAACATaGAGATCCCGCAGGGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: SAPRTGPMVVGAQSPQPLWFLRT*RSRRER Trigger: CCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCA...TAGAGGTTGGGGGCTCTGGGCCCCAACTACCATCGGACCTGTCCTGGGAGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTATTTCCTGACCACCTCTaGCTGCCACTGTCAACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGCTRSSLRAGGYPRPVLFPDHL*LPLSTL Trigger: CAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAAA...TAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS GCA 90 bp | ATTGTGGTAGAGGCTCAGGCCTTCCAGGGACACCAGCTGGCAAGCTaGCTCAGGCACCTCGGGAAACCGGTTCCGAGACAAGTCTGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: IVVEAQAFQGHQLAS*LRHLGKPVPRQVCH Trigger: ATGACAGACTTGTCTCGGAACCGGTTTCCCGAGGTGCCTGAGGCAGCTTGCCAGCTGGTGTCCCTGGAAGGCCTGAGCCTCTACCACAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175968.8 |
||
| CDS CCA 90 bp | ACCGGAAGAGGAAGCTGTTTGGTCTCTGAATGGAGCCCAGGGGCCTaGGAACAGGAGCTGTCACTGGTCCAGATACAGGAAGGGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGRGSCLVSEWSPGA*EQELSLVQIQEGGP Trigger: AGGACCCCCTTCCTGTATCTGGACCAGTGACAGCTCCTGTTCCCAGGCCCCTGGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCCGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CCA 90 bp | GTTGCTGATGATAAGCACTCGAAGGGGCAGCTGGCAGATGTAGGGTaGCAACGACGACAGCTGGTTCCGGCAGCCTGGGTGATGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VADDKHSKGQLADVG*QRRQLVPAAWVMSD Trigger: GTCAGACATCACCCAGGCTGCCGGAACCAGCTGTCGTCGTTGCCACCCTACATCTGCCAGCTGCCCCTTCGAGTGCTTATCATCAGCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTAGGAAGAGGAAGCTGTTaGGTCTCTGAATGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGCTRSSLRAGGYPRPVLGRGSC*VSEWSP Trigger: TGGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCC...TAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAGCCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS CCA 90 bp | GTTGCTGATGATAAGCACTCGAAGGGGCAGCTGGCAGATGTAGGGTaGCAACGACGACAGCTGGTTCCGGCTGAGGTTGAGGTAGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VADDKHSKGQLADVG*QRRQLVPAEVEVGE Trigger: CTCACCTACCTCAACCTCAGCCGGAACCAGCTGTCGTCGTTGCCACCCTACATCTGCCAGCTGCCCCTTCGAGTGCTTATCATCAGCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CCA 90 bp | AGGACTAGAGCCACTCTGAGAAGAGGACCGGAAGAGGAAGCTGTTTaGTCTCTGAATGGAGCCCAGGGGCCTGGGAACAGGAGCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RTRATLRRGPEEEAV*SLNGAQGPGNRSCH Trigger: GTGACAGCTCCTGTTCCCAGGCCCCTGGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCCGGTCCTCTTCTCAGAGTGGCTCTAGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGTAGAGGCTCAGGCCTTCTGCTTCAAACGCCGGTaGGACAAGTTCAGGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PQGWVQAFQAIVVEAQAFCFKRR*DKFRVP Trigger: CGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGCA...GAAGGCCTGAGCCTCTACCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR CAA 90 bp | GGGGCAACGTGGGTCCTAGGAGCCCAGGAGCCGAGTGTAGACGACATAGAGCAGACATTCTTCCGAGACTaGAGAGCACTGAGCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GATWVLGAQEPSVDDIEQTFFRD*RALSFG Trigger: GCCAAAGCTCAGTGCTCTCAAGTCTCGGAAGAATGT...CTGCTCTATGTCGTCTACACTCGGCTCCTGGGCTCCTAGGACCCACGTTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
||
| CDS TCA 90 bp | GACATTCTTCCGAGACTTGAGAGCACTGAGCTTTGGCACAGCAGGTaGGGGCACATGAATGAAGGGTACAGAGCGGGGCCGCAGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DILPRLESTELWHSR*GHMNEGYRAGPQLV Trigger: AACCAGCTGCGGCCCCGCTCTGTACCCTTCATTCATGTGCCCTCACCTGCTGTGCCAAAGCTCAGTGCTCTCAAGTCTCGGAAGAATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 ENSMUST00000176768.2 |
||
| CDS-3UTR CAA 90 bp | CAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCCCCACTCTGTTGCTGTaGCTTCCGCTCCCGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDHGHQVLVNWLGPGVICPTLLL*LPLPFL Trigger: CAGGAACGGGAGCGGAAGCAACAGCAACAGAGTGGG...GCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGGGCTGTAAGATTCCCCAAGGCTGGGTTCAGGCATTTCAGGCAATTGTGGAAGGAGGAGATTGGGTaGGGGCAGGAGCTAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: VRAVRFPKAGFRHFRQLWKEEIG*GQELGG Trigger: CCCTCCTAGCTCCTGCCCCAACCCAATCTCCTCCTT...CCACAATTGCCTGAAATGCCTGAACCCAGCCTTGGGGAATCTTACAGCCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176011.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAAGGGAAAGGCTTGCACAGGCAGGTAGCCCAGGCAGGACAAGACCTGGCTACATTCTTCCGAGACTaGAGAGCACTGAGCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKGKGLHRQVAQAGQDLATFFRD*RALSFG Trigger: GCCAAAGCTCAGTGCTCTCAAGTCTCGGAAGAATGT...AGCCAGGTCTTGTCCTGCCTGGGCTACCTGCCTGTGCAAGCCTTTCCCTTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CAA 90 bp | CTGTACCCGAAGCAGCCTAAGGGCAGGGGGATATCCAAGGCCAGTGCTACACACACATTCTTCCGAGACTaGAGAGCACTGAGCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LYPKQPKGRGISKASATHTFFRD*RALSFG Trigger: GCCAAAGCTCAGTGCTCTCAAGTCTCGGAAGAATGT...GTGTGTAGCACTGGCCTTGGATATCCCCCTGCCCTTAGGCTGCTTCGGGTACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS TCA 90 bp | CGCGACTCTAGGACCTGGCGAAGTTGGGATATTAGCTCCTTCTCCTaGGGAAACGGCCGAGGTCTCAAAACAGACTCTGGAGAGGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RDSRTWRSWDISSFS*GNGRGLKTDSGEEG Trigger: TCCTTCCTCTCCAGAGTCTGTTTTGAGACCTCGGCCGTTTCCTCAGGAGAAGGAGCTAATATCCCAACTTCGCCAGGTCCTAGAGTCGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 ENSMUST00000176871.2 |
||
| CDS GCA 90 bp | GGCTTCTCCACATCCCCTGCTACAAGGCTTAATTCAGAAGGCAGCTaGTCCTCAGCTGCACTTCGATCTTCATCTTCCCCAGGAACGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GFSTSPATRLNSEGS*SSAALRSSSSPGTW Trigger: CCACGTTCCTGGGGAAGATGAAGATCGAAGTGCAGCTGAGGAGCAGCTGCCTTCTGAATTAAGCCTTGTAGCAGGGGATGTGGAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CCA 90 bp | AGCTGCTCCTCAGCTGCACTTCGATCTTCATCTTCCCCAGGAACGTaGCTGTCAATAAAGTCAATCTGCTCCAGGTCTCCATCGCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SCSSAALRSSSSPGT*LSIKSICSRSPSPA Trigger: CGCTGGCGATGGAGACCTGGAGCAGATTGACTTTATTGACAGCCACGTTCCTGGGGAAGATGAAGATCGAAGTGCAGCTGAGGAGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAGGGTAAGGGTATTGTGGGTATGAGAGTGGGGCTTCTGAGGTCAGCGTTGGGACTCTGTAGGGGGTaGCTATCCAGCAGAACGACC | + |
|
Preference number: 5 (lower is better) Translates to: TKGKGIVGMRVGLLRSALGLCRG*LSSRTT Trigger: GGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTCC...CAACGCTGACCTCAGAAGCCCCACTCTCATACCCACAATACCCTTACCCTTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS-3UTR CAA 90 bp | ACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGCTCCCGGCAGGGCTCCTAACTaGTTGTTGCTGATGATAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TMVTKSLLIGWAQVSSAPGRAPN*LLLMIS Trigger: GCTTATCATCAGCAACAACAAGTTAGGAGCCCTGCC...GGGAGCAGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | CACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTTGGTTCCTTCGAACATaGAGATCCCGCAGGGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: HKTMVTKSLLIGWAQVSSWFLRT*RSRRER Trigger: CCGTTCCCTGCGGGATCTCAATGTTCGAAGGAACCA...AGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | TCCAAGGCCAGTGCTACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCGGACTCTGTAGGGGGTaGCTATCCAGCAGAACGACC | + |
|
Preference number: 5 (lower is better) Translates to: SKASATHKTMVTKSLLIGGLCRG*LSSRTT Trigger: GGTCGTTCTGCTGGATAGCAACCCCCTACAGAGTCC...GCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTAGCACTGGCCTTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | TACACACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCTTTCCTGACCACCTCTaGCTGCCACTGTCAACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTQDHGHQVLVNWLGPGVFPDHL*LPLSTL Trigger: CAGCGTTGACAGTGGCAGCAAGAGGTGGTCAGGAAA...GACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | CACAAGACCATGGTCACCAAGTCCTTGTTAATTGGCTGGGCCCAGGTGTCATCTGGAAGAGGAAGCTGTTaGGTCTCTGAATGGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HKTMVTKSLLIGWAQVSSGRGSC*VSEWSP Trigger: TGGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCC...AGATGACACCTGGGCCCAGCCAATTAACAAGGACTTGGTGACCATGGTCTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS-3UTR CAA 90 bp | GCCCATACTGGGCTCACATCCCCTGCTAATAGTTCTCTCTACAAAACAGAGATATGCTTCAAACGCCGGTaGGACAAGTTCAGGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AHTGLTSPANSSLYKTEICFKRR*DKFRVP Trigger: CGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGCA...TATCTCTGTTTTGTAGAGAGAACTATTAGCAGGGGATGTGAGCCCAGTATGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031734.16 |
||
| CDS GCA 72 bp | ATTGCAGGTGGCCTGTGTGGATGGGGCCGAAGCACCTaGCCCGGCAGCTCGGATCCCCCGCTTCAGGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: IAGGLCGWGRST*PGSSDPPLQDA Trigger: AGCGTCCTGAAGCGGGGGATCCGAGCTGCCGGGGCAGGTGCTTCGGCCCCATCCACACAGGCCACCTGCAAT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CCA 72 bp | GGACTTTGGTGGGCCATTGCAGGTGGCCTGTGTGGATaGGGCCGAAGCACCTGCCCCGGCAGCTCGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: GLWWAIAGGLCG*GRSTCPGSSDP Trigger: GGGATCCGAGCTGCCGGGGCAGGTGCTTCGGCCCCATCCACACAGGCCACCTGCAATGGCCCACCAAAGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS TCA 72 bp | ACGACGACAGCTGGTTCCGGCAGCCTGGGTGATGTCTaGCAAGTCGTAACTGCGGGCCGCGCCCCGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TTTAGSGSLGDV*QVVTAGRAPGE Trigger: TTCCCCCGGGGCGCGGCCCGCAGTTACGACTTGTCAGACATCACCCAGGCTGCCGGAACCAGCTGTCGTCGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS TCA 72 bp | GGTGGCAACGACGACAGCTGGTTCCGGCAGCCTGGGTaGTGTCTGACAAGTCGTAACTGCGGGCCGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGNDDSWFRQPG*CLTSRNCGPRP Trigger: GGGGCGCGGCCCGCAGTTACGACTTGTCAGACATCACCCAGGCTGCCGGAACCAGCTGTCGTCGTTGCCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS CCA 72 bp | TGCTGGACTTTGGTGGGCCATTGCAGGTGGCCTGTGTaGATGGGGCCGAAGCACCTGCCCCGGCAGCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: CWTLVGHCRWPV*MGPKHLPRQLG Trigger: TCCGAGCTGCCGGGGCAGGTGCTTCGGCCCCATCCACACAGGCCACCTGCAATGGCCCACCAAAGTCCAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CAA 72 bp | CTCCAGGTCTCCATCGCCAGCGCCATCTTCCCTAGGTaGTCTAGGCCCCCGGGGATCACGAGCCAGCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LQVSIASAIFPR*SRPPGITSQLR Trigger: TCGGAGCTGGCTCGTGATCCCCGGGGGCCTAGACAACCTAGGGAAGATGGCGCTGGCGATGGAGACCTGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CAA 72 bp | CGCAGCTGGTTCGCCAGCTGGCAAAGGAGGACTCCGTaGGCGAGAGCTTCTGCCAGGTCCTCAGGTAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSWFASWQRRTP*ARASARSSGRG Trigger: GCCCCTACCTGAGGACCTGGCAGAAGCTCTCGCCAACGGAGTCCTCCTTTGCCAGCTGGCGAACCAGCTGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 ENSMUST00000176768.2 |
||
| CDS GCA 72 bp | CAACTGCAAAGTGTCTGGGCGCCGCCTCTCCTCCCCTaGAGGCTCCTCTCGCCTGCTGCTAGATGGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QLQSVWAPPLLP*RLLSPAARWLL Trigger: GAGAAGCCATCTAGCAGCAGGCGAGAGGAGCCTGCAGGGGAGGAGAGGCGGCGCCCAGACACTTTGCAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS GCA 72 bp | CCCCCACTCTGTTGCTGTTGCTTCCGCTCCCGTTCCTaGCACAACTGCAAAGTGTCTGGGCGCCGCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLCCCCFRSRS*HNCKVSGRRLS Trigger: GGAGAGGCGGCGCCCAGACACTTTGCAGTTGTGGCAGGAACGGGAGCGGAAGCAACAGCAACAGAGTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS GCA 72 bp | GCGAGAGCTTCTGCCAGGTCCTCAGGTAGGGGCTGCTaGAGCCGCGACTCTAGGACCTGGCGAAGTTGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ARASARSSGRGC*SRDSRTWRSWD Trigger: ATCCCAACTTCGCCAGGTCCTAGAGTCGCGGCTGCAGCAGCCCCTACCTGAGGACCTGGCAGAAGCTCTCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS GCA 72 bp | TTGGCGAGAGCTTCTGCCAGGTCCTCAGGTAGGGGCTaGTGCAGCCGCGACTCTAGGACCTGGCGAAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LARASARSSGRG*CSRDSRTWRSW Trigger: CCAACTTCGCCAGGTCCTAGAGTCGCGGCTGCAGCAGCCCCTACCTGAGGACCTGGCAGAAGCTCTCGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CCA 72 bp | GCAGCTGGTTCGCCAGCTGGCAAAGGAGGACTCCGTTaGCGAGAGCTTCTGCCAGGTCCTCAGGTAGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAGSPAGKGGLR*RELLPGPQVGA Trigger: AGCCCCTACCTGAGGACCTGGCAGAAGCTCTCGCCAACGGAGTCCTCCTTTGCCAGCTGGCGAACCAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 ENSMUST00000176768.2 |
||
| CDS CAA 90 bp | GTCAATCTGCTCCAGGTCTCCATCGCCAGCGCCATCTTCCCTAGGTaGTCTAGGCCCCCGGGGATCACGAGCCAGCTCCGAGATCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VNLLQVSIASAIFPR*SRPPGITSQLRDPE Trigger: TTCCGGATCTCGGAGCTGGCTCGTGATCCCCGGGGGCCTAGACAACCTAGGGAAGATGGCGCTGGCGATGGAGACCTGGAGCAGATTGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS TCA 72 bp | AAACCGGTTCCGAGACAAGTCAGCCTGGGTGATGTCTaGCAAGTCGTAACTGCGGGCCGCGCCCCGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KPVPRQVSLGDV*QVVTAGRAPGE Trigger: TTCCCCCGGGGCGCGGCCCGCAGTTACGACTTGTCAGACATCACCCAGGCTGACTTGTCTCGGAACCGGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031734.16 ENSMUST00000176667.8 |
||
| CDS GCA 72 bp | TGTTGCTGTTGCTTCCGCTCCCGTTCCTGCCACAACTaGAAAGTGTCTGGGCGCCGCCTCTCCTCCCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CCCCFRSRSCHN*KVSGRRLSSPA Trigger: TGCAGGGGAGGAGAGGCGGCGCCCAGACACTTTGCAGTTGTGGCAGGAACGGGAGCGGAAGCAACAGCAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CCA 72 bp | GCTTCAAACGCCGGTTGGACAAGTTCAGGGTCCCGGTaGCCACAGCCTCCTCTAGGGCTCGTTCTGCGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: ASNAGWTSSGSR*PQPPLGLVLRY Trigger: GTAGCGCAGAACGAGCCCTAGAGGAGGCTGTGGCCACCGGGACCCTGAACTTGTCCAACCGGCGTTTGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000176011.8 ENSMUST00000176667.8 ENSMUST00000177477.2 |
||
| CDS CCA 72 bp | GATAAGCACTCGAAGGGGCAGCTGGCAGATGTAGGGTaGCAACGACGACAGCTGGTTCCGGCAGCCTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: DKHSKGQLADVG*QRRQLVPAAWV Trigger: CACCCAGGCTGCCGGAACCAGCTGTCGTCGTTGCCACCCTACATCTGCCAGCTGCCCCTTCGAGTGCTTATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177477.2 |
||
| CDS TCA 72 bp | CCGAGACTTGAGAGCACTGAGCTTTGGCACAGCAGGTaGGGGCACATGAATGAAGGGTACAGAGCGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRLESTELWHSR*GHMNEGYRAGP Trigger: CGGCCCCGCTCTGTACCCTTCATTCATGTGCCCTCACCTGCTGTGCCAAAGCTCAGTGCTCTCAAGTCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 ENSMUST00000176768.2 |
||
| CDS CCA 72 bp | GATAAGCACTCGAAGGGGCAGCTGGCAGATGTAGGGTaGCAACGACGACAGCTGGTTCCGGCTGAGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: DKHSKGQLADVG*QRRQLVPAEVE Trigger: CTCAACCTCAGCCGGAACCAGCTGTCGTCGTTGCCACCCTACATCTGCCAGCTGCCCCTTCGAGTGCTTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS GCA 72 bp | CACAAACCAGGACAACAGCCAGAGCCATTACCGACATaGAGGACATGCAGGACAGGGAGGGAGAGCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HKPGQQPEPLPT*RTCRTGRESRA Trigger: TGCCCTGCTCTCCCTCCCTGTCCTGCATGTCCTGCATGTCGGTAATGGCTCTGGCTGTTGTCCTGGTTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176768.2 |
||
| CDS CAA 72 bp | AGCCACTCTGAGAAGAGGACCGGAAGAGGAAGCTGTTaGGTCTCTGAATGGAGCCCAGGGGCCTGGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: SHSEKRTGRGSC*VSEWSPGAWEQ Trigger: CTGTTCCCAGGCCCCTGGGCTCCATTCAGAGACCAAACAGCTTCCTCTTCCGGTCCTCTTCTCAGAGTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
||
| CDS CAA 90 bp | CGCAGGCTTCCCAAGGTGCTGATGTCTGGAGGCAGGGCTCCTAACTaGTTGTTGCTGATGATAAGCACTCGAAGGGGCAGCTGGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: RRLPKVLMSGGRAPN*LLLMISTRRGSWQM Trigger: CATCTGCCAGCTGCCCCTTCGAGTGCTTATCATCAGCAACAACAAGTTAGGAGCCCTGCCTCCAGACATCAGCACCTTGGGAAGCCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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| CDS TCA 72 bp | TGCTCACATCAAGCTGCCGCAGGCTTCCCAAGGTGCTaGTGTCTGGAGGCAGGGCTCCTAACTTGTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: CSHQAAAGFPRC*CLEAGLLTCCC Trigger: GCAACAACAAGTTAGGAGCCCTGCCTCCAGACATCAGCACCTTGGGAAGCCTGCGGCAGCTTGATGTGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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| CDS CAA 72 bp | GTGCTGATGTCTGGAGGCAGGGCTCCTAACTTGTTGTaGCTGATGATAAGCACTCGAAGGGGCAGCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VLMSGGRAPNLL*LMISTRRGSWQ Trigger: CTGCCAGCTGCCCCTTCGAGTGCTTATCATCAGCAACAACAAGTTAGGAGCCCTGCCTCCAGACATCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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| CDS CAA 72 bp | CCCAAGGTGCTGATGTCTGGAGGCAGGGCTCCTAACTaGTTGTTGCTGATGATAAGCACTCGAAGGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PKVLMSGGRAPN*LLLMISTRRGS Trigger: GCTGCCCCTTCGAGTGCTTATCATCAGCAACAACAAGTTAGGAGCCCTGCCTCCAGACATCAGCACCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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| CDS CCA 72 bp | CTCCTGAGGAAACGGCCGAGGTCTCAAAACAGACTCTaGAGAGGAAGGACTAGAGCCACTCTGAGAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LLRKRPRSQNRL*RGRTRATLRRG Trigger: TCCTCTTCTCAGAGTGGCTCTAGTCCTTCCTCTCCAGAGTCTGTTTTGAGACCTCGGCCGTTTCCTCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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| CDS CAA 72 bp | AAGGTGCTGATGTCTGGAGGCAGGGCTCCTAACTTGTaGTTGCTGATGATAAGCACTCGAAGGGGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: KVLMSGGRAPNL*LLMISTRRGSW Trigger: CCAGCTGCCCCTTCGAGTGCTTATCATCAGCAACAACAAGTTAGGAGCCCTGCCTCCAGACATCAGCACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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| CDS CAA 72 bp | CAGGCTTCTAGGAAACTCTCGACATTCTTCCGAGACTaGAGAGCACTGAGCTTTGGCACAGCAGGTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: QASRKLSTFFRD*RALSFGTAGEG Trigger: GCCCTCACCTGCTGTGCCAAAGCTCAGTGCTCTCAAGTCTCGGAAGAATGTCGAGAGTTTCCTAGAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 ENSMUST00000176768.2 |
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| CDS TCA 72 bp | AGGACCTGGCGAAGTTGGGATATTAGCTCCTTCTCCTaGGGAAACGGCCGAGGTCTCAAAACAGACTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RTWRSWDISSFS*GNGRGLKTDSG Trigger: TCCAGAGTCTGTTTTGAGACCTCGGCCGTTTCCTCAGGAGAAGGAGCTAATATCCCAACTTCGCCAGGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 ENSMUST00000176871.2 |
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| CDS TCA 72 bp | AAAACAGACTCTGGAGAGGAAGGACTAGAGCCACTCTaGGAAGAGGACCGGAAGAGGAAGCTGTTTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: KTDSGEEGLEPL*EEDRKRKLFGL Trigger: GAGACCAAACAGCTTCCTCTTCCGGTCCTCTTCTCAGAGTGGCTCTAGTCCTTCCTCTCCAGAGTCTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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| CDS GCA 72 bp | ACATCCCCTGCTACAAGGCTTAATTCAGAAGGCAGCTaGTCCTCAGCTGCACTTCGATCTTCATCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TSPATRLNSEGS*SSAALRSSSSP Trigger: TGGGGAAGATGAAGATCGAAGTGCAGCTGAGGAGCAGCTGCCTTCTGAATTAAGCCTTGTAGCAGGGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031734.16 ENSMUST00000175968.8 ENSMUST00000176667.8 |
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