Pregenerated sensors for LRCH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068015Ensembl transcript IDs: ENSMUST00000088970.7, ENSMUST00000226799.2, ENSMUST00000228252.2
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TCCTCCGGGACCTGGCAGGGAGGTGAGTTGGGGAGCAGGTACAGGTaGCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAG | + |
Preference number: 1 (lower is better) Translates to: SSGTWQGGELGSRYR*QEQSPESLLWEEAE Trigger: CTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAACTCACCTCCCTGCCAGGTCCCGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR GCA 90 bp | AGTTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTaGTCTGGGAAGAGGCTGAGCCCACCCAGAGGAAAGGGCTTGGTC | + |
Preference number: 1 (lower is better) Translates to: SWGAGTGARSRVQSP*SGKRLSPPRGKGLV Trigger: GACCAAGCCCTTTCCTCTGGGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR GCA 90 bp | CTCGCTGTGCACATAGCTGCCCACCAGGGGCCCTGCCCTGTGAGCTaGACACTTCCCAAGTTTCCTACCAGACACCATGACCCTTCCAAG | + |
Preference number: 1 (lower is better) Translates to: LAVHIAAHQGPCPVS*TLPKFPTRHHDPSK Trigger: CTTGGAAGGGTCATGGTGTCTGGTAGGAAACTTGGGAAGTGTGCAGCTCACAGGGCAGGGCCCCTGGTGGGCAGCTATGTGCACAGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR TCA 90 bp | TGGCGGTTGGTGAGTGTGGAAGGGATGAAGGGGATTGAAAGGCAATaGTGTGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGT | + |
Preference number: 1 (lower is better) Translates to: WRLVSVEGMKGIERQ*CAATQFSASSLTRC Trigger: ACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCACATCATTGCCTTTCAATCCCCTTCATCCCTTCCACACTCACCAACCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR TCA 90 bp | GAGAGAGCAGGACCTACAGGAGCATCGCTGCCCACACCACGAGTGTaGAGGAGTATGAGGTATGCACTGACAGGCTTTGTCGCTGTCGCT | + |
Preference number: 1 (lower is better) Translates to: ERAGPTGASLPTPRV*RSMRYALTGFVAVA Trigger: AGCGACAGCGACAAAGCCTGTCAGTGCATACCTCATACTCCTTCACACTCGTGGTGTGGGCAGCGATGCTCCTGTAGGTCCTGCTCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 90 bp | GTGGACATTGGCTGCAATCCTCCTGGGTGCCCTTCACAAGCCCCTTaGAGCAAACAGGGAGGACTCCAACTAACCAGCCAGCAAAGCAGT | + |
Preference number: 1 (lower is better) Translates to: VDIGCNPPGCPSQAP*SKQGGLQLTSQQSS Trigger: ACTGCTTTGCTGGCTGGTTAGTTGGAGTCCTCCCTGTTTGCTGCAAGGGGCTTGTGAAGGGCACCCAGGAGGATTGCAGCCAATGTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 90 bp | AGCTCCCTGACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTaGAGGCCAACTCTAAAAGGTCCTGAGTCCTCCCTTAGGCTGAAA | + |
Preference number: 1 (lower is better) Translates to: SSLTRCQVTPAQPET*RPTLKGPESSLRLK Trigger: TTTCAGCCTAAGGGAGGACTCAGGACCTTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGTCAGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR TCA 90 bp | GACTGGGTTATCTGCCCACACCTACAGGGTGAGTGTGTGTGGGTGTaGCTGCCCCTGCATAGTCCTATGAAGCCTTCCTTGAAGGAAGCT | + |
Preference number: 1 (lower is better) Translates to: DWVICPHLQGECVWV*LPLHSPMKPSLKEA Trigger: AGCTTCCTTCAAGGAAGGCTTCATAGGACTATGCAGGGGCAGTCACACCCACACACACTCACCCTGTAGGTGTGGGCAGATAACCCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR TCA 90 bp | CATTTGGTAATGGCGGTTGGTGAGTGTGGAAGGGATGAAGGGGATTaGAAGGCAATGATGTGCTGCTACTCAGTTCTCCGCCAGCTCCCT | + |
Preference number: 1 (lower is better) Translates to: HLVMAVGECGRDEGD*KAMMCCYSVLRQLP Trigger: AGGGAGCTGGCGGAGAACTGAGTAGCAGCACATCATTGCCTTTCAATCCCCTTCATCCCTTCCACACTCACCAACCGCCATTACCAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR CCA 90 bp | AGAAGCAGTGTTCGGCAAGAAGGATATAAAAGGAAGCCGACAATGTaGCTGGAGCTTGCAGCAGGGCCTTCTCACATTGTAAAGAGGCTT | + |
Preference number: 1 (lower is better) Translates to: RSSVRQEGYKRKPTM*LELAAGPSHIVKRL Trigger: AAGCCTCTTTACAATGTGAGAAGGCCCTGCTGCAAGCTCCAGCCACATTGTCGGCTTCCTTTTATATCCTTCTTGCCGAACACTGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR TCA 90 bp | TGCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTaGAATGGTTGTGCTTGGCATTTGGTAATGGCGGTTGGTGAGTGT | + |
Preference number: 1 (lower is better) Translates to: CKEFGFDKTDARDSL*NGCAWHLVMAVGEC Trigger: ACACTCACCAACCGCCATTACCAAATGCCAAGCACAACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR TCA 90 bp | TCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCTaGATCATATATACTACAGAATGCACACCAAGACCCGGAACTCCT | + |
Preference number: 1 (lower is better) Translates to: SATEEARVSCLIFLS*IIYTTECTPRPGTP Trigger: AGGAGTTCCGGGTCTTGGTGTGCATTCTGTAGTATATATGATTCAGGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR TCA 90 bp | CATTGTAAAGAGGCTTCCAGAGACTCAGCAAGATATGGGCCAACATaGTTAGAGTCTAACATTTCTTCCTTTAACCACAAAAAGAAGCAC | + |
Preference number: 1 (lower is better) Translates to: HCKEASRDSARYGPT*LESNISSFNHKKKH Trigger: GTGCTTCTTTTTGTGGTTAAAGGAAGAAATGTTAGACTCTAATCATGTTGGCCCATATCTTGCTGAGTCTCTGGAAGCCTCTTTACAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR CCA 90 bp | GTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTaGATGGAATGCAGAAATATAAATAAGAACGATGTTCCACAAACC | + |
Preference number: 1 (lower is better) Translates to: VYYIGGQEGCWNVGN*MECRNINKNDVPQT Trigger: GGTTTGTGGAACATCGTTCTTATTTATATTTCTGCATTCCATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR CCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTCCAGAGTCCCTGCTCTaGGAAGAGGCTGAGCCCACC | + |
Preference number: 2 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGPESLL*EEAEPT Trigger: GGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGG...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR CCA 90 bp | TGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAACACCTGCGGCAGGGAGGTGAGTTaGGGAGCAGGTACAGGTGCC | + |
Preference number: 2 (lower is better) Translates to: CCYSVLRQLPDPLSGNTCGREVS*GAGTGA Trigger: GGCACCTGTACCTGCTCCCCAACTCACCTCCCTGCC...GCAGGTGTTACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR TCA 90 bp | GCAATGATGTGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTGCTCTGGGAAGAGGCTaGGCCCACCCAGAGGAAAGG | + |
Preference number: 2 (lower is better) Translates to: AMMCCYSVLRQLPDPLSGALGRG*AHPEER Trigger: CCTTTCCTCTGGGTGGGCTCAGCCTCTTCCCAGAGC...ACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCACATCATTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR GCA 90 bp | CCAGGTGGCGCTCTAACAGGAAGGCACTTCCCCAGATTAGGCCTGCAGAGGGCATGGGCTGGACCAGGATaGCAGAGCAGAGCGTTTGGA | + |
Preference number: 2 (lower is better) Translates to: PGGALTGRHFPRLGLQRAWAGPG*QSRAFG Trigger: TCCAAACGCTCTGCTCTGGCATCCTGGTCCAGCCCA...TGCCCTCTGCAGGCCTAATCTGGGGAAGTGCCTTCCTGTTAGAGCGCCACCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR GCA 90 bp | TCCCTGACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTAGAGTCCAGAGTCCCTaGTCTGGGAAGAGGCTGAGC | + |
Preference number: 2 (lower is better) Translates to: SLTRCQVTPAQPETCRPTRVQSP*SGKRLS Trigger: GCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCT...AGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGTCAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR GCA 90 bp | GCAATGATGTGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAGAGTCCAGAGTCCCTaGTCTGGGAAGAGGCTGAGC | + |
Preference number: 2 (lower is better) Translates to: AMMCCYSVLRQLPDPLSGRVQSP*SGKRLS Trigger: GCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCT...ACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCACATCATTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR CAA 90 bp | GGTGGACATTGGCTGCAATCCTCCTGGGTGCCCTTCACAAGCCCCTaGCAGCAAACAGGGAGGACTCCAACTAACCAGCCAGCAAAGCAG | + |
Preference number: 2 (lower is better) Translates to: GGHWLQSSWVPFTSP*QQTGRTPTNQPAKQ Trigger: CTGCTTTGCTGGCTGGTTAGTTGGAGTCCTCCCTGTTTGCTGCAAGGGGCTTGTGAAGGGCACCCAGGAGGATTGCAGCCAATGTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR GCA 90 bp | CCAGGTGGCGCTCTAACAGGAAGGCACTTCCCCAGATTAGGCCTGCAGAGGGCAGTTCTCCTTACCTCCTaGACAGAGCAGAGGCTCATG | + |
Preference number: 2 (lower is better) Translates to: PGGALTGRHFPRLGLQRAVLLTS*TEQRLM Trigger: CATGAGCCTCTGCTCTGTGCAGGAGGTAAGGAGAAC...TGCCCTCTGCAGGCCTAATCTGGGGAAGTGCCTTCCTGTTAGAGCGCCACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR CCA 90 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTCTAAAACCAGAGTCCCTGCTCTaGGAAGAGGCTGAGCCCACC | + |
Preference number: 2 (lower is better) Translates to: TRCQVTPAQPETCRPTLKPESLL*EEAEPT Trigger: GGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGG...TTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR CCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTTCCTCCTCCGGGACCTaGCAGGGAGGTGAGTTGGGG | + |
Preference number: 2 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGSSSGT*QGGELG Trigger: CCCCAACTCACCTCCCTGCCAGGTCCCGGAGGAGGA...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR GCA 90 bp | CCAGGTGGCGCTCTAACAGGAAGGCACTTCCCCAGATTAGGCCTGCAGAGGGCAAAGGAGTATGAGGTATaGACTGACAGGCTTTGTCGC | + |
Preference number: 2 (lower is better) Translates to: PGGALTGRHFPRLGLQRAKEYEV*TDRLCR Trigger: GCGACAAAGCCTGTCAGTGCATACCTCATACTCCTT...TGCCCTCTGCAGGCCTAATCTGGGGAAGTGCCTTCCTGTTAGAGCGCCACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR TCA 90 bp | AACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCGCTCTGGGAAGAGGCTaGGCCCACCCAGAGGAAAGG | + |
Preference number: 2 (lower is better) Translates to: NTSQKTALSVCHRRSTCFALGRG*AHPEER Trigger: CCTTTCCTCTGGGTGGGCTCAGCCTCTTCCCAGAGC...GAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR GCA 90 bp | ACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTGGGAGCAGGTACAGGTaGCAGGAGCAGAGTCCAGAG | + |
Preference number: 2 (lower is better) Translates to: TPLRKQLSLSATEEARVSGSRYR*QEQSPE Trigger: CTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCC...AGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR TCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTGACCTGGCAGGGAGGTaGGTTGGGGAGCAGGTACAG | + |
Preference number: 2 (lower is better) Translates to: ARSLVLIKQTHATHCEMVDLAGR*VGEQVQ Trigger: CTGTACCTGCTCCCCAACTCACCTCCCTGCCAGGTC...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR TCA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGACCTGGCAGGGAGGTaGGTTGGGGAGCAGGTACAG | + |
Preference number: 2 (lower is better) Translates to: VSLLYWGTRGLLECRKLDDLAGR*VGEQVQ Trigger: CTGTACCTGCTCCCCAACTCACCTCCCTGCCAGGTC...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR TCA 90 bp | TGTTGGCTTCCTGACTTGAGCTCTTACGGCCCTTGTAGCTTGATGGTCAACTTCAGTCCTCCCTTAGGCTaGAACCACGCCAGTGCAGTT | + |
Preference number: 2 (lower is better) Translates to: CWLPDLSSYGPCSLMVNFSPPLG*NHASAV Trigger: AACTGCACTGGCGTGGTTTCAGCCTAAGGGAGGACT...GAAGTTGACCATCAAGCTACAAGGGCCGTAAGAGCTCAAGTCAGGAAGCCAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR CCA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGGCAGGGAGGTGAGTTaGGGAGCAGGTACAGGTGCC | + |
Preference number: 2 (lower is better) Translates to: VSLLYWGTRGLLECRKLDGREVS*GAGTGA Trigger: GGCACCTGTACCTGCTCCCCAACTCACCTCCCTGCC...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR CCA 90 bp | CAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACATCTTATGGCATAAAGGGGAGGAGCTGGGCTaGACCAGGATGCCAGAGCAG | + |
Preference number: 2 (lower is better) Translates to: QHNAGRKRLRQSNILWHKGEELG*TRMPEQ Trigger: CTGCTCTGGCATCCTGGTCCAGCCCAGCTCCTCCCC...TTTATGCCATAAGATGTTAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR TCA 90 bp | CCTCTCATCTTTACACTGCTATGCCATCTGACAAAACAGGCATTTGTGCAGTACAGGAAGCTCACCCACTaGCAGGATGGGGTGTGCTCC | + |
Preference number: 2 (lower is better) Translates to: PLIFTLLCHLTKQAFVQYRKLTH*QDGVCS Trigger: GGAGCACACCCCATCCTGTCAGTGGGTGAGCTTCCT...GTACTGCACAAATGCCTGTTTTGTCAGATGGCATAGCAGTGTAAAGATGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR TCA 90 bp | CCAGGTGGCGCTCTAACAGGAAGGCACTTCCCCAGATTAGGCCTGCAGAGGGCAGTTTATAAATTAGACTaGGCCCAAATGCTGGCTTTT | + |
Preference number: 2 (lower is better) Translates to: PGGALTGRHFPRLGLQRAVYKLD*AQMLAF Trigger: AAAAGCCAGCATTTGGGCTCAGTCTAATTTATAAAC...TGCCCTCTGCAGGCCTAATCTGGGGAAGTGCCTTCCTGTTAGAGCGCCACCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR TCA 90 bp | CCCTTCAAGTATGGAGGCATCTCAGAATCTCATCTCCCCTGTTCTCATGAATATCTTTGCCCCAAAAGCTaGGAGGCCGATACGCAAGCC | + |
Preference number: 2 (lower is better) Translates to: PFKYGGISESHLPCSHEYLCPKS*EADTQA Trigger: GGCTTGCGTATCGGCCTCTCAGCTTTTGGGGCAAAG...ATATTCATGAGAACAGGGGAGATGAGATTCTGAGATGCCTCCATACTTGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR GCA 90 bp | TGGCTGGAGCTTGCAGCAGGGCCTTCTCACATTGTAAAGAGGCTTCCAGAGACTGATCTTATCATCTGCTaGTATAGTAACCCAAGGCCC | + |
Preference number: 2 (lower is better) Translates to: WLELAAGPSHIVKRLPETDLIIC*YSNPRP Trigger: GGGCCTTGGGTTACTATAGCAGCAGATGATAAGATC...AGTCTCTGGAAGCCTCTTTACAATGTGAGAAGGCCCTGCTGCAAGCTCCAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR CCA 90 bp | CTCAGCTTCAGAACACCACCTAATAAAAAGGAAAAGCGGGCTAAGCAGATCCACGAGGGCATGCTCTGGTaGACATTGGCTGCAATCCTC | + |
Preference number: 2 (lower is better) Translates to: LSFRTPPNKKEKRAKQIHEGMLW*TLAAIL Trigger: GAGGATTGCAGCCAATGTCCACCAGAGCATGCCCTC...GTGGATCTGCTTAGCCCGCTTTTCCTTTTTATTAGGTGGTGTTCTGAAGCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR CAA 90 bp | CGTCCATGTTGGCTTCCTGACTTGAGCTCTTACGGCCCTTGTAGCTaGATGGTCAACTTCAACCTGCTCCATGTTTTCATCCCTTTCTTC | + |
Preference number: 2 (lower is better) Translates to: RPCWLPDLSSYGPCS*MVNFNLLHVFIPFF Trigger: GAAGAAAGGGATGAAAACATGGAGCAGGTTGAAGTTGACCATCAAGCTACAAGGGCCGTAAGAGCTCAAGTCAGGAAGCCAACATGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR TCA 90 bp | TCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGAACACCTGCCCAACCTaGAACCTGCAGGCCAACTCT | + |
Preference number: 2 (lower is better) Translates to: SVYYIGGQEGCWNVGNWMNTCPT*NLQANS Trigger: AGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTT...CATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR TCA 90 bp | GAACCCTGTATTCACCATCAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACTCGACAGCTAACTaGAGAGATGACAGGGATGGG | + |
Preference number: 2 (lower is better) Translates to: EPCIHHQHNAGRKRLRQSNSTAN*RDDRDG Trigger: CCCATCCCTGTCATCTCTTCAGTTAGCTGTCGAGTT...AGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTGATGGTGAATACAGGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR GCA 90 bp | TCTACATTTTGGCATCTCTTGTTCTTTGAACACCAGCAGTTGTACGTCCATGTTGGGAGCAGGTACAGGTaGCAGGAGCAGAGTCCAGAG | + |
Preference number: 2 (lower is better) Translates to: STFWHLLFFEHQQLYVHVGSRYR*QEQSPE Trigger: CTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCC...AACATGGACGTACAACTGCTGGTGTTCAAAGAACAAGAGATGCCAAAATGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR GCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTACTGTGAAATGGTTGTaGTTGGCATTTGGTAATGGC | + |
Preference number: 2 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGTVKWL*LAFGNG Trigger: GCCATTACCAAATGCCAAGCACAACCATTTCACAGT...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR CCA 90 bp | CAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACATCTTATGGCATAAACAGAGCAGAGGCTCATaGGAGAGAGCAGGACCTACA | + |
Preference number: 2 (lower is better) Translates to: QHNAGRKRLRQSNILWHKQSRGS*ERAGPT Trigger: TGTAGGTCCTGCTCTCTCCCATGAGCCTCTGCTCTG...TTTATGCCATAAGATGTTAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR TCA 90 bp | CTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCAGGGATGAAGGGGATTaGAAGGCAATGATGTGCTGC | + |
Preference number: 2 (lower is better) Translates to: LSLSATEEARVSCLIFLSRDEGD*KAMMCC Trigger: GCAGCACATCATTGCCTTTCAATCCCCTTCATCCCT...GGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR GCA 90 bp | AAACTGAAGAGTCAAATGCATCACATTCTGGGTCTGCAGTTATTCAATATACCACTGGTGGACATTGGCTaGAATCCTCCTGGGTGCCCT | + |
Preference number: 2 (lower is better) Translates to: KLKSQMHHILGLQLFNIPLVDIG*NPPGCP Trigger: AGGGCACCCAGGAGGATTGCAGCCAATGTCCACCAG...TGGTATATTGAATAACTGCAGACCCAGAATGTGATGCATTTGACTCTTCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR TCA 90 bp | CTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCGGGATTGAAAGGCAATaGTGTGCTGCTACTCAGTTC | + |
Preference number: 2 (lower is better) Translates to: LSLSATEEARVSCLIFLSGIERQ*CAATQF Trigger: GAACTGAGTAGCAGCACATCATTGCCTTTCAATCCC...GGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
||
3UTR-3UTR CCA 90 bp | GTACAAAGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTAGGAAGCCGACAATGTaGCTGGAGCTTGCAGCAGGG | + |
Preference number: 2 (lower is better) Translates to: VQRDFIVTEKYKIAPKTTRKPTM*LELAAG Trigger: CCCTGCTGCAAGCTCCAGCCACATTGTCGGCTTCCT...AGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCTTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
||
3UTR-3UTR TCA 90 bp | CAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACATCTTATGGCATAAAATCAACTGCCAGTCCTaGATTAGGACCAGAATCAAG | + |
Preference number: 2 (lower is better) Translates to: QHNAGRKRLRQSNILWHKINCQS*IRTRIK Trigger: CTTGATTCTGGTCCTAATTCAGGACTGGCAGTTGAT...TTTATGCCATAAGATGTTAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
||
3UTR-3UTR GCA 90 bp | CCCTTCAAGTATGGAGGCATCTCAGAATCTCATCTCCCCTGTTCTCATGAATATGACCCCGTCACATTATaGAAAAATAGAAATCCCTTC | + |
Preference number: 2 (lower is better) Translates to: PFKYGGISESHLPCSHEYDPVTL*KNRNPF Trigger: GAAGGGATTTCTATTTTTGCATAATGTGACGGGGTC...ATATTCATGAGAACAGGGGAGATGAGATTCTGAGATGCCTCCATACTTGAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
||
3UTR-3UTR CCA 90 bp | CCTCTCATCTTTACACTGCTATGCCATCTGACAAAACAGGCATTTGTGCAGTACCCACAAACCAAAAGGTaGATAACACCTCTCAGAAAA | + |
Preference number: 2 (lower is better) Translates to: PLIFTLLCHLTKQAFVQYPQTKR*ITPLRK Trigger: TTTTCTGAGAGGTGTTATCCACCTTTTGGTTTGTGG...GTACTGCACAAATGCCTGTTTTGTCAGATGGCATAGCAGTGTAAAGATGAGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR CCA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATCCACAAACCAAAAGGTaGATAACACCTCTCAGAAAA | + |
Preference number: 2 (lower is better) Translates to: VSLLYWGTRGLLECRKLDPQTKR*ITPLRK Trigger: TTTTCTGAGAGGTGTTATCCACCTTTTGGTTTGTGG...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR TCA 90 bp | ACTTATCATACTACCAGCCAGCCATGCACATTTCATTGCACATATAGACATAGTCAGCATTCCCAAACTTaGCAGATGAATGACTGGGTT | + |
Preference number: 2 (lower is better) Translates to: TYHTTSQPCTFHCTYRHSQHSQT*QMNDWV Trigger: AACCCAGTCATTCATCTGTCAAGTTTGGGAATGCTG...ACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR GCA 90 bp | AACCCTGTATTCACCATCAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAATCACATTCTGGGTCTaGAGTTATTCAATATACCAA | + |
Preference number: 2 (lower is better) Translates to: NPVFTINTMLGGRGSDNLITFWV*SYSIYQ Trigger: TTGGTATATTGAATAACTGCAGACCCAGAATGTGAT...TAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTGATGGTGAATACAGGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR GCA 90 bp | AGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTCATAACTCACCATCAACACAATaGTGGGAGGAAGAGGCTCAG | + |
Preference number: 2 (lower is better) Translates to: RDFIVTEKYKIAPKTTHNSPSTQ*WEEEAQ Trigger: CTGAGCCTCTTCCTCCCAGCATTGTGTTGATGGTGA...GTTATGAGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR CCA 90 bp | CAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACATCTTATGGCATAAACATATCTCAGCAAACTaGACATTTATCTTGACGGCA | + |
Preference number: 2 (lower is better) Translates to: QHNAGRKRLRQSNILWHKHISAN*TFILTA Trigger: TGCCGTCAAGATAAATGTCCAGTTTGCTGAGATATG...TTTATGCCATAAGATGTTAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR CAA 90 bp | AGCTTGATAATAATAAAAACGAGTATGTCTACATTTTGGCATCTCTaGTTCTTTGAACACCAGCAGTTGTACGTCCATGTTGGCTTCCTG | + |
Preference number: 2 (lower is better) Translates to: SLIIIKTSMSTFWHL*FFEHQQLYVHVGFL Trigger: CAGGAAGCCAACATGGACGTACAACTGCTGGTGTTCAAAGAACAAGAGATGCCAAAATGTAGACATACTCGTTTTTATTATTATCAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR CCA 90 bp | GAACGTTCATATCTCAGCAAACTGGACATTTATCTTGACGGCATTAACACCACCAAATGCATCACATTCTaGGTCTGCAGTTATTCAATA | + |
Preference number: 2 (lower is better) Translates to: ERSYLSKLDIYLDGINTTKCITF*VCSYSI Trigger: TATTGAATAACTGCAGACCCAGAATGTGATGCATTT...GGTGGTGTTAATGCCGTCAAGATAAATGTCCAGTTTGCTGAGATATGAACGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR CCA 90 bp | CAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACATCTTATGGCATAAAAAATCAAAGGCCAAATaGACATTCAAAGTAAATGGG | + |
Preference number: 2 (lower is better) Translates to: QHNAGRKRLRQSNILWHKKSKAK*TFKVNG Trigger: CCCATTTACTTTGAATGTCCATTTGGCCTTTGATTT...TTTATGCCATAAGATGTTAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR GCA 90 bp | GTTCCAGGATCCATAGACTTATTTGAAACTGAAGAGTCAAATGCATCACATTCTATTCTACAAAGTTTGTaGTTCAGGAAAAATCTGGCT | + |
Preference number: 2 (lower is better) Translates to: VPGSIDLFETEESNASHSILQSL*FRKNLA Trigger: AGCCAGATTTTTCCTGAAGCACAAACTTTGTAGAAT...AGAATGTGATGCATTTGACTCTTCAGTTTCAAATAAGTCTATGGATCCTGGAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 72 bp | GGTCCTGAGTCCTCCCTTAGGCTGAAACCACGCCAGTaGAGTTCCTCCTCCGGGACCTGGCAGGGAGGTGAG | + |
Preference number: 3 (lower is better) Translates to: GPESSLRLKPRQ*SSSSGTWQGGE Trigger: CTCACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAGGGAGGACTCAGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR CCA 72 bp | CCCACTGACAGGATGGGGTGTGCTCCTTTCTTGGCCTaGCTCCCTGCTAGTCCTAATGTGCTTGCCCCTGCC | + |
Preference number: 3 (lower is better) Translates to: PTDRMGCAPFLA*LPASPNVLAPA Trigger: GGCAGGGGCAAGCACATTAGGACTAGCAGGGAGCCAGGCCAAGAAAGGAGCACACCCCATCCTGTCAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR GCA 72 bp | CACATAGCTGCCCACCAGGGGCCCTGCCCTGTGAGCTaGACACTTCCCAAGTTTCCTACCAGACACCATGAC | + |
Preference number: 3 (lower is better) Translates to: HIAAHQGPCPVS*TLPKFPTRHHD Trigger: GTCATGGTGTCTGGTAGGAAACTTGGGAAGTGTGCAGCTCACAGGGCAGGGCCCCTGGTGGGCAGCTATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR CCA 72 bp | ATTAGGCCTGCAGAGGGCACAGAGGGCATGCTCTGGTaGACATTGGCTGCAATCCTCCTGGGTGCCCTTCAC | + |
Preference number: 3 (lower is better) Translates to: IRPAEGTEGMLW*TLAAILLGALH Trigger: GTGAAGGGCACCCAGGAGGATTGCAGCCAATGTCCACCAGAGCATGCCCTCTGTGCCCTCTGCAGGCCTAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 72 bp | CATGCTCTGGTGGACATTGGCTGCAATCCTCCTGGGTaGCCTTCACAAGCCCCTTGCAGCAAACAGGGAGGA | + |
Preference number: 3 (lower is better) Translates to: HALVDIGCNPPG*PSQAPCSKQGG Trigger: TCCTCCCTGTTTGCTGCAAGGGGCTTGTGAAGGGCACCCAGGAGGATTGCAGCCAATGTCCACCAGAGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 72 bp | AGCTGCCAATCTGAAGTCCCACACTCAGAACCCATCTaGCATGCCCTGAGGCAGTGTCTGTCGGTGTGTGTG | + |
Preference number: 3 (lower is better) Translates to: SCQSEVPHSEPI*HALRQCLSVCV Trigger: CACACACACCGACAGACACTGCCTCAGGGCATGGCAGATGGGTTCTGAGTGTGGGACTTCAGATTGGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR TCA 72 bp | ATCTGCCCACACCTACAGGGTGAGTGTGTGTGGGTGTaGCTGCCCCTGCATAGTCCTATGAAGCCTTCCTTG | + |
Preference number: 3 (lower is better) Translates to: ICPHLQGECVWV*LPLHSPMKPSL Trigger: CAAGGAAGGCTTCATAGGACTATGCAGGGGCAGTCACACCCACACACACTCACCCTGTAGGTGTGGGCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR GCA 72 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTaGAGGCCAACTCTAAAAGGTCCTGAGTCCTCCCTT | + |
Preference number: 3 (lower is better) Translates to: TRCQVTPAQPET*RPTLKGPESSL Trigger: AAGGGAGGACTCAGGACCTTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR-3UTR CAA 90 bp | ACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACATCTTATGGCATAAAGAATCCCTTCACAAGCCCCTaGCAGCAAACAGGGAGGACT | + |
Preference number: 3 (lower is better) Translates to: TMLGGRGSDNLTSYGIKNPFTSP*QQTGRT Trigger: AGTCCTCCCTGTTTGCTGCAAGGGGCTTGTGAAGGG...ATTCTTTATGCCATAAGATGTTAGATTGTCTGAGCCTCTTCCTCCCAGCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR TCA 72 bp | TGCAAGGCAACCCCTCTACAGATCAACTGCCAGTCCTaGATTAGGACCAGAATCAAGTATCAAGACTCCTGT | + |
Preference number: 3 (lower is better) Translates to: CKATPLQINCQS*IRTRIKYQDSC Trigger: ACAGGAGTCTTGATACTTGATTCTGGTCCTAATTCAGGACTGGCAGTTGATCTGTAGAGGGGTTGCCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR-3UTR CAA 90 bp | TCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGGTGAAATGGTTGTGCTaGGCATTTGGTAATGGCGGT | + |
Preference number: 3 (lower is better) Translates to: SVYYIGGQEGCWNVGNWMVKWLC*AFGNGG Trigger: ACCGCCATTACCAAATGCCAAGCACAACCATTTCAC...CATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR CCA 72 bp | TGGGGTGCTCTCTTGATTTCAGTCAGTTTATTATATTaGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTG | + |
Preference number: 3 (lower is better) Translates to: WGALLISVSLLY*GTRGLLECRKL Trigger: CAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGACTGAAATCAAGAGAGCACCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR-3UTR CAA 90 bp | AGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTCATAACCAATGTGGCTGGAGCTaGCAGCAGGGCCTTCTCACA | + |
Preference number: 3 (lower is better) Translates to: RDFIVTEKYKIAPKTTHNQCGWS*QQGLLT Trigger: TGTGAGAAGGCCCTGCTGCAAGCTCCAGCCACATTG...GTTATGAGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR TCA 72 bp | TTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTaGAATGGTTGTGCTTGGCATTTGGTAATGGCGGTT | + |
Preference number: 3 (lower is better) Translates to: FGFDKTDARDSL*NGCAWHLVMAV Trigger: AACCGCCATTACCAAATGCCAAGCACAACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR TCA 72 bp | GAGGCTTCCAGAGACTCAGCAAGATATGGGCCAACATaGTTAGAGTCTAACATTTCTTCCTTTAACCACAAA | + |
Preference number: 3 (lower is better) Translates to: EASRDSARYGPT*LESNISSFNHK Trigger: TTTGTGGTTAAAGGAAGAAATGTTAGACTCTAATCATGTTGGCCCATATCTTGCTGAGTCTCTGGAAGCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 72 bp | TTTCAGTCAGTTTATTATATTGGGGGACAAGAGGGCTaGTGGAATGTAGGAAACTGGATGGAATGCAGAAAT | + |
Preference number: 3 (lower is better) Translates to: FQSVYYIGGQEG*WNVGNWMECRN Trigger: ATTTCTGCATTCCATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGACTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR GCA 72 bp | AAGATACATGTAAAAATATACTTCAGGACTCTGGGGTaGAAAGCCCTGAAGGTACAACATTCTAGACCATCA | + |
Preference number: 3 (lower is better) Translates to: KIHVKIYFRTLG*KALKVQHSRPS Trigger: TGATGGTCTAGAATGTTGTACCTTCAGGGCTTTGCACCCCAGAGTCCTGAAGTATATTTTTACATGTATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR CCA 72 bp | AGCAGCAAAGATTCTATAAATATAACCCTTCAAGTATaGAGGCATCTCAGAATCTCATCTCCCCTGTTCTCA | + |
Preference number: 3 (lower is better) Translates to: SSKDSINITLQV*RHLRISSPLFS Trigger: TGAGAACAGGGGAGATGAGATTCTGAGATGCCTCCATACTTGAAGGGTTATATTTATAGAATCTTTGCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 72 bp | TACATTCTGTCTACTTATCATACTACCAGCCAGCCATaGACATTTCATTGCACATATAGACATAGTGTACAG | + |
Preference number: 3 (lower is better) Translates to: YILSTYHTTSQP*TFHCTYRHSVQ Trigger: CTGTACACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGTAGACAGAATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR TCA 72 bp | CTTCAACATCTACCTCTGGTCCTAGATGCTCCTCAATaGCATAAAGTACAGTGCAAAAATTATACTTCAAGA | + |
Preference number: 3 (lower is better) Translates to: LQHLPLVLDAPQ*HKVQCKNYTSR Trigger: TCTTGAAGTATAATTTTTGCACTGTACTTTATGTCATTGAGGAGCATCTAGGACCAGAGGTAGATGTTGAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR TCA 72 bp | TCAGAAAAATATGATAATCTTCATAGCAGCCATATCTaGGGAACGTTCATATCTCAGCAAACTGGACATTTA | + |
Preference number: 3 (lower is better) Translates to: SEKYDNLHSSHI*GTFISQQTGHL Trigger: TAAATGTCCAGTTTGCTGAGATATGAACGTTCCTCAGATATGGCTGCTATGAAGATTATCATATTTTTCTGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR GCA 72 bp | AAATTACCCAGTGGGAACTGTATTCTACAAAGTTTGTaGTTCAGGAAAAATCTGGCTTATAAATGTTCAGTT | + |
Preference number: 3 (lower is better) Translates to: KLPSGNCILQSL*FRKNLAYKCSV Trigger: AACTGAACATTTATAAGCCAGATTTTTCCTGAAGCACAAACTTTGTAGAATACAGTTCCCACTGGGTAATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR CCA 72 bp | AGCTTGATAATAATAAAAACGAGTATGTCTACATTTTaGCATCTCTTGTTCTTTGAACACCAGCAGTTGTAC | + |
Preference number: 3 (lower is better) Translates to: SLIIIKTSMSTF*HLLFFEHQQLY Trigger: GTACAACTGCTGGTGTTCAAAGAACAAGAGATGCCAAAATGTAGACATACTCGTTTTTATTATTATCAAGCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTCCGCCGGTGCCTCCGTaGTGCTGGTGGTGTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGPPVPP*CWWCWW Trigger: CCACCAACACCACCAGCACCACGGAGGCACCGGCGG...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCACCCAGAGGGGACGACACCATCCATaGGTGCCGCCCCCAGGTCTT | + |
Preference number: 4 (lower is better) Translates to: QEQSPESLLWEEAEPTQRGRHHP*VPPPGL Trigger: AAGACCTGGGGGCGGCACTCATGGATGGTGTCGTCC...CCTCTGGGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAACACCTGCGCGGGCGCGAAAGCTTaGGGTTCGCTTCCCGGCGTC | + |
Preference number: 4 (lower is better) Translates to: CCYSVLRQLPDPLSGNTCAGAKA*GSLPGV Trigger: GACGCCGGGAAGCGAACCCCAAGCTTTCGCGCCCGC...GCAGGTGTTACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCACCCAGAGGGCCCCCAGGTCTTCATaGAGGGTCACCTTCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: QEQSPESLLWEEAEPTQRAPRSS*RVTFSL Trigger: GAGGCTGAAGGTGACCCTTCATGAAGACCTGGGGGC...CCTCTGGGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTCGAGTGTCGAGCATCTaGACGGCCAGCAAGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGRVSSI*TASKLL Trigger: GAGCAGCTTGCTGGCCGTGCAGATGCTCGACACTCG...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | CAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCACCCAGAGGATGCTCTCTCGGAGTTaGTCCACCAGCTCCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: QEQSPESLLWEEAEPTQRMLSRS*STSSFS Trigger: GGAGAAGGAGCTGGTGGAGCAACTCCGAGAGAGCAT...CCTCTGGGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTGACACCATCCATGAGTaGCGCCCCCAGGTCTTCATG | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGDTIHE*RPQVFM Trigger: CATGAAGACCTGGGGGCGGCACTCATGGATGGTGTC...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | ACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCAGCACGGCCAGCAAGCTaGTCTCTTTCTTGTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: TGARSRVQSPCSGKRLSPARPAS*SLSCPE Trigger: CTCAGGACAAGAAAGAGAGCAGCTTGCTGGCCGTGC...TGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGGCACGCATCCTCCTTaGTGGTCTGGTCTTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: LGSRYRCQEQSPESLLWEGTHPP*WSGLLP Trigger: TGGAAGAAGACCAGACCATCAAGGAGGATGCGTGCC...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGCACGGCCAGCAAGCTaGTCTCTTTCTTGTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: LGSRYRCQEQSPESLLWEARPAS*SLSCPE Trigger: CTCAGGACAAGAAAGAGAGCAGCTTGCTGGCCGTGC...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAATGCTCTCTCGGAGTTaGTCCACCAGCTCCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: LGSRYRCQEQSPESLLWEMLSRS*STSSFS Trigger: GGAGAAGGAGCTGGTGGAGCAACTCCGAGAGAGCAT...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | GCAATGATGTGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTCTCTCTTTCTTGTCCTaGGATGCCGCTGTCCCCCAA | + |
Preference number: 4 (lower is better) Translates to: AMMCCYSVLRQLPDPLSGLSFLS*DAAVPQ Trigger: TTGGGGGACAGCGGCATCTCAGGACAAGAAAGAGAG...ACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCACATCATTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | GCAGTGTCTGTCGGTGTGTGTGGACCACACTCATCCCTCCTGTGGTCTTTTGTAGGACGACACCATCCATaGGTGCCGCCCCCAGGTCTT | + |
Preference number: 4 (lower is better) Translates to: AVSVGVCGPHSSLLWSFVGRHHP*VPPPGL Trigger: AAGACCTGGGGGCGGCACTCATGGATGGTGTCGTCC...TACAAAAGACCACAGGAGGGATGAGTGTGGTCCACACACACCGACAGACACTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTCTAAAACCGGTGCCTCCGTGGTaGTGGTGGTGTTGGTGGTGT | + |
Preference number: 4 (lower is better) Translates to: TRCQVTPAQPETCRPTLKPVPPW*WWCWWC Trigger: ACACCACCAACACCACCAGCACCACGGAGGCACCGG...TTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | ACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCATTCTCCTCTCTCATCTaGTCCATCTTCCTCCGGATC | + |
Preference number: 4 (lower is better) Translates to: TGARSRVQSPCSGKRLSPFSSLI*SIFLRI Trigger: GATCCGGAGGAAGATGGAGCAGATGAGAGAGGAGAA...TGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTCTAAAATGTTGGTGGTGCTGGTaGAGATGCGGGTGCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: TRCQVTPAQPETCRPTLKCWWCW*RCGCRA Trigger: CGCCCTGCACCCGCATCTCCACCAGCACCACCAACA...TTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCAAATGGGGCCTCTCTATaGTGGGGAGGTAAAGAGAGT | + |
Preference number: 4 (lower is better) Translates to: TGARSRVQSPCSGKRLSPNGASL*WGGKES Trigger: ACTCTCTTTACCTCCCCACCATAGAGAGGCCCCATT...TGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTCTGTCTTCCACGTGTTaGTGTAAATGGGGCCTCTCT | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGLSSTC*CKWGLS Trigger: AGAGAGGCCCCATTTACACCAACACGTGGAAGACAG...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTGTCTCCAGCTGCAACTaGCCATTGAGTGAAGGATCA | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGVSSCN*PLSEGS Trigger: TGATCCTTCACTCAATGGCCAGTTGCAGCTGGAGAC...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCAGTCTCCAGCTGCAACTaGCCATTGAGTGAAGGATCA | + |
Preference number: 4 (lower is better) Translates to: TGARSRVQSPCSGKRLSPVSSCN*PLSEGS Trigger: TGATCCTTCACTCAATGGCCAGTTGCAGCTGGAGAC...TGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR CAA 72 bp | AGCTCACCCACTGACAGGATGGGGTGTGCTCCTTTCTaGGCCTGGCTCCCTGCTAGTCCTAATGTGCTTGCC | + |
Preference number: 4 (lower is better) Translates to: SSPTDRMGCAPF*AWLPASPNVLA Trigger: GGCAAGCACATTAGGACTAGCAGGGAGCCAGGCCAAGAAAGGAGCACACCCCATCCTGTCAGTGGGTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR CAA 72 bp | TGGCTGCAATCCTCCTGGGTGCCCTTCACAAGCCCCTaGCAGCAAACAGGGAGGACTCCAACTAACCAGCCA | + |
Preference number: 4 (lower is better) Translates to: WLQSSWVPFTSP*QQTGRTPTNQP Trigger: TGGCTGGTTAGTTGGAGTCCTCCCTGTTTGCTGCAAGGGGCTTGTGAAGGGCACCCAGGAGGATTGCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAACACCTGCTTGCGATTAAGACTTTaGGAGGCAGACCACACAGGC | + |
Preference number: 4 (lower is better) Translates to: CCYSVLRQLPDPLSGNTCLRLRL*EADHTG Trigger: GCCTGTGTGGTCTGCCTCTCAAAGTCTTAATCGCAA...GCAGGTGTTACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGCTGCAACTGGCCATTaGGTGAAGGATCAGGGAATT | + |
Preference number: 4 (lower is better) Translates to: LGSRYRCQEQSPESLLWEAATGH*VKDQGI Trigger: AATTCCCTGATCCTTCACTCAATGGCCAGTTGCAGC...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTACTCTGCCTGCAGGCTaGCCTGTACCTCCTCAGGGC | + |
Preference number: 4 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGTLPAG*PVPPQG Trigger: GCCCTGAGGAGGTACAGGGCAGCCTGCAGGCAGAGT...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | CTCCTGTATGCTAACCCCACCCTGTTCCTGTCCTGGTTCTCCTTACCTCCTGCAGACACCATCCATGAGTaGCGCCCCCAGGTCTTCATG | + |
Preference number: 4 (lower is better) Translates to: LLYANPTLFLSWFSLPPADTIHE*RPQVFM Trigger: CATGAAGACCTGGGGGCGGCACTCATGGATGGTGTC...TGCAGGAGGTAAGGAGAACCAGGACAGGAACAGGGTGGGGTTAGCATACAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | AACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCCCGCCGGTGCCTCCGTaGTGCTGGTGGTGTTGGTGG | + |
Preference number: 4 (lower is better) Translates to: NTSQKTALSVCHRRSTCFPPVPP*CWWCWW Trigger: CCACCAACACCACCAGCACCACGGAGGCACCGGCGG...GAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAACACCTGCCTGTCTTCCACGTGTTaGTGTAAATGGGGCCTCTCT | + |
Preference number: 4 (lower is better) Translates to: CCYSVLRQLPDPLSGNTCLSSTC*CKWGLS Trigger: AGAGAGGCCCCATTTACACCAACACGTGGAAGACAG...GCAGGTGTTACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTGATCTCGGACGGACGTaGTTGGCCAGGTGGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGDLGRT*LARWQR Trigger: CCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATC...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR TCA 90 bp | CCCACCCTGTTCCTGTCCTGGTTCTCCTTACCTCCTGCACAGAGCAGAGGCTCAGCTGCAACTGGCCATTaGGTGAAGGATCAGGGAATT | + |
Preference number: 4 (lower is better) Translates to: PTLFLSWFSLPPAQSRGSAATGH*VKDQGI Trigger: AATTCCCTGATCCTTCACTCAATGGCCAGTTGCAGC...TGAGCCTCTGCTCTGTGCAGGAGGTAAGGAGAACCAGGACAGGAACAGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR TCA 90 bp | GCAGTGTCTGTCGGTGTGTGTGGACCACACTCATCCCTCCTGTGGTCTTTTGTAAGGGCACCAGGAACCTaGACGAGGCTTCAGGCCAAA | + |
Preference number: 4 (lower is better) Translates to: AVSVGVCGPHSSLLWSFVRAPGT*TRLQAK Trigger: TTTGGCCTGAAGCCTCGTTCAGGTTCCTGGTGCCCT...TACAAAAGACCACAGGAGGGATGAGTGTGGTCCACACACACCGACAGACACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGGTCTTAGAAACACATaGCTGGAAAGCAACTGGGGT | + |
Preference number: 4 (lower is better) Translates to: LGSRYRCQEQSPESLLWEGLRNT*LESNWG Trigger: ACCCCAGTTGCTTTCCAGGCATGTGTTTCTAAGACC...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTCTAAAAGTGAGGGGACATGGATaGTGGCGACAGATCTCGGAC | + |
Preference number: 4 (lower is better) Translates to: TRCQVTPAQPETCRPTLKVRGHG*WRQISD Trigger: GTCCGAGATCTGTCGCCAGCATCCATGTCCCCTCAC...TTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTCTAAAAACTCCTTCAGCTTCCTaGCGCTCAGGTTCAAGCCCC | + |
Preference number: 4 (lower is better) Translates to: TRCQVTPAQPETCRPTLKTPSAS*RSGSSP Trigger: GGGGCTTGAACCTGAGCGCCAGGAAGCTGAAGGAGT...TTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCACTTCTCCTGAGTCCATaGGGAACAGGTTCAAAATAC | + |
Preference number: 4 (lower is better) Translates to: TGARSRVQSPCSGKRLSPLLLSP*GTGSKY Trigger: GTATTTTGAACCTGTTCCCCATGGACTCAGGAGAAG...TGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTACTCCATTAACTGTTTaGGCTGACCTATCTCTTCAG | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGTPLTV*ADLSLQ Trigger: CTGAAGAGATAGGTCAGCTCAAACAGTTAATGGAGT...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTCTAAAAGGCACGCATCCTCCTTaGTGGTCTGGTCTTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: TRCQVTPAQPETCRPTLKGTHPP*WSGLLP Trigger: TGGAAGAAGACCAGACCATCAAGGAGGATGCGTGCC...TTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | ACCCGCTGTCAGGTAACACCTGCCCAACCTGAAACCTGCAGGCCAACTCTAAAAAGGAGCACCTGCAGCTaGTTCATCTCCCTGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: TRCQVTPAQPETCRPTLKRSTCS*FISLKQ Trigger: CTGCTTCAGGGAGATGAAGCAGCTGCAGGTGCTCCT...TTTTAGAGTTGGCCTGCAGGTTTCAGGTTGGGCAGGTGTTACCTGACAGCGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTAACATTAGATCATTTTaGACCTCACGGTCTGGAGAC | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGNIRSF*TSRSGD Trigger: GTCTCCAGACCGTGAGGTGCAAAATGATCTAATGTT...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTCGGACGGACGTGGTTaGCCAGGTGGCAGAGGACGA | + |
Preference number: 4 (lower is better) Translates to: TPLRKQLSLSATEEARVSSDGRG*PGGRGR Trigger: TCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGA...AGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | GAACCCTGTATTCACCATCAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTGCCCCCAGGTCTTCATaGAGGGTCACCTTCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: EPCIHHQHNAGRKRLRQSAPRSS*RVTFSL Trigger: GAGGCTGAAGGTGACCCTTCATGAAGACCTGGGGGC...AGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTGATGGTGAATACAGGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR TCA 90 bp | CCCACCCTGTTCCTGTCCTGGTTCTCCTTACCTCCTGCACAGAGCAGAGGCTCAACAGTCTTTCGAATGTaGCGAAAATCCAACTGCAGG | + |
Preference number: 4 (lower is better) Translates to: PTLFLSWFSLPPAQSRGSTVFRM*RKSNCR Trigger: CCTGCAGTTGGATTTTCGTCACATTCGAAAGACTGT...TGAGCCTCTGCTCTGTGCAGGAGGTAAGGAGAACCAGGACAGGAACAGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR GCA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTCCGGTGCCTCCGTGGTaGTGGTGGTGTTGGTGGTGT | + |
Preference number: 4 (lower is better) Translates to: ITPLRKQLSLSATEEARVPVPPW*WWCWWC Trigger: ACACCACCAACACCACCAGCACCACGGAGGCACCGG...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAACCGGATCGTAAACTGTaGGTCTATAGATTCCAAGTT | + |
Preference number: 4 (lower is better) Translates to: LGSRYRCQEQSPESLLWEPDRKL*VYRFQV Trigger: AACTTGGAATCTATAGACCCACAGTTTACGATCCGG...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAACACCTGCCCGGATCGTAAACTGTaGGTCTATAGATTCCAAGTT | + |
Preference number: 4 (lower is better) Translates to: CCYSVLRQLPDPLSGNTCPDRKL*VYRFQV Trigger: AACTTGGAATCTATAGACCCACAGTTTACGATCCGG...GCAGGTGTTACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | CTCAGCTTCAGAACACCACCTAATAAAAAGGAAAAGCGGGCTAAGCAGATCCACTCGGACGGACGTGGTTaGCCAGGTGGCAGAGGACGA | + |
Preference number: 4 (lower is better) Translates to: LSFRTPPNKKEKRAKQIHSDGRG*PGGRGR Trigger: TCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGA...GTGGATCTGCTTAGCCCGCTTTTCCTTTTTATTAGGTGGTGTTCTGAAGCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTGATCTCGGACGGACGTaGTTGGCCAGGTGGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: ITPLRKQLSLSATEEARVDLGRT*LARWQR Trigger: CCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATC...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAACACCTGCGTTAAGAATTTCCAGTaGTACAAATTGGCACAGCTC | + |
Preference number: 4 (lower is better) Translates to: CCYSVLRQLPDPLSGNTCVKNFQ*YKLAQL Trigger: GAGCTGTGCCAATTTGTATCACTGGAAATTCTTAAC...GCAGGTGTTACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTACTCTGATACAGTTGTaGTACAGGTTAAGAATTTCC | + |
Preference number: 4 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGTLIQL*YRLRIS Trigger: GGAAATTCTTAACCTGTATCACAACTGTATCAGAGT...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | ACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCAACTCTGATACAGTTGTaGTACAGGTTAAGAATTTCC | + |
Preference number: 4 (lower is better) Translates to: TGARSRVQSPCSGKRLSPTLIQL*YRLRIS Trigger: GGAAATTCTTAACCTGTATCACAACTGTATCAGAGT...TGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CCCTTCAAGTATGGAGGCATCTCAGAATCTCATCTCCCCTGTTCTCATGAATATGGACGACACCATCCATaGGTGCCGCCCCCAGGTCTT | + |
Preference number: 4 (lower is better) Translates to: PFKYGGISESHLPCSHEYGRHHP*VPPPGL Trigger: AAGACCTGGGGGCGGCACTCATGGATGGTGTCGTCC...ATATTCATGAGAACAGGGGAGATGAGATTCTGAGATGCCTCCATACTTGAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTTGTTGGTGGTGCTGGTaGAGATGCGGGTGCAGGGCG | + |
Preference number: 4 (lower is better) Translates to: ARSLVLIKQTHATHCEMVCWWCW*RCGCRA Trigger: CGCCCTGCACCCGCATCTCCACCAGCACCACCAACA...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTACTCCTTCAGCTTCCTaGCGCTCAGGTTCAAGCCCC | + |
Preference number: 4 (lower is better) Translates to: TPLRKQLSLSATEEARVSTPSAS*RSGSSP Trigger: GGGGCTTGAACCTGAGCGCCAGGAAGCTGAAGGAGT...AGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TGGCTGGAGCTTGCAGCAGGGCCTTCTCACATTGTAAAGAGGCTTCCAGAGACTGTCTCCAGCTGCAACTaGCCATTGAGTGAAGGATCA | + |
Preference number: 4 (lower is better) Translates to: WLELAAGPSHIVKRLPETVSSCN*PLSEGS Trigger: TGATCCTTCACTCAATGGCCAGTTGCAGCTGGAGAC...AGTCTCTGGAAGCCTCTTTACAATGTGAGAAGGCCCTGCTGCAAGCTCCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAATCATTGGGAGAATACTaGCTTCCATTACTCTGTAAC | + |
Preference number: 4 (lower is better) Translates to: LGSRYRCQEQSPESLLWESLGEY*LPLLCN Trigger: GTTACAGAGTAATGGAAGCCAGTATTCTCCCAATGA...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTTCGGACGGACGTGGTTaGCCAGGTGGCAGAGGACGA | + |
Preference number: 4 (lower is better) Translates to: ARSLVLIKQTHATHCEMVSDGRG*PGGRGR Trigger: TCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGA...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | CCCTTCAAGTATGGAGGCATCTCAGAATCTCATCTCCCCTGTTCTCATGAATATGATCTCGGACGGACGTaGTTGGCCAGGTGGCAGAGG | + |
Preference number: 4 (lower is better) Translates to: PFKYGGISESHLPCSHEYDLGRT*LARWQR Trigger: CCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATC...ATATTCATGAGAACAGGGGAGATGAGATTCTGAGATGCCTCCATACTTGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR TCA 90 bp | ACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTCCTCCATGTGCCAGTaGGCATCCTCTTCTATCCGC | + |
Preference number: 4 (lower is better) Translates to: TPLRKQLSLSATEEARVSSSMCQ*ASSSIR Trigger: GCGGATAGAAGAGGATGCTCACTGGCACATGGAGGA...AGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTGCTGCAACTGGCCATTaGGTGAAGGATCAGGGAATT | + |
Preference number: 4 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGAATGH*VKDQGI Trigger: AATTCCCTGATCCTTCACTCAATGGCCAGTTGCAGC...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | CCTCTCATCTTTACACTGCTATGCCATCTGACAAAACAGGCATTTGTGCAGTACCGAGTGTCGAGCATCTaGACGGCCAGCAAGCTGCTC | + |
Preference number: 4 (lower is better) Translates to: PLIFTLLCHLTKQAFVQYRVSSI*TASKLL Trigger: GAGCAGCTTGCTGGCCGTGCAGATGCTCGACACTCG...GTACTGCACAAATGCCTGTTTTGTCAGATGGCATAGCAGTGTAAAGATGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTTTCTCCTCTCTCATCTaGTCCATCTTCCTCCGGATC | + |
Preference number: 4 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGFSSLI*SIFLRI Trigger: GATCCGGAGGAAGATGGAGCAGATGAGAGAGGAGAA...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CCA 90 bp | ACTTATCATACTACCAGCCAGCCATGCACATTTCATTGCACATATAGACATAGTGCGGGCGCGAAAGCTTaGGGTTCGCTTCCCGGCGTC | + |
Preference number: 4 (lower is better) Translates to: TYHTTSQPCTFHCTYRHSAGAKA*GSLPGV Trigger: GACGCCGGGAAGCGAACCCCAAGCTTTCGCGCCCGC...ACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTTGGTGTTGGTGGTGCTaGTGGAGATGCGGGTGCAGG | + |
Preference number: 4 (lower is better) Translates to: ARSLVLIKQTHATHCEMVWCWWC*WRCGCR Trigger: CCTGCACCCGCATCTCCACCAGCACCACCAACACCA...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | CCCACCCTGTTCCTGTCCTGGTTCTCCTTACCTCCTGCACAGAGCAGAGGCTCATCATTGGGAGAATACTaGCTTCCATTACTCTGTAAC | + |
Preference number: 4 (lower is better) Translates to: PTLFLSWFSLPPAQSRGSSLGEY*LPLLCN Trigger: GTTACAGAGTAATGGAAGCCAGTATTCTCCCAATGA...TGAGCCTCTGCTCTGTGCAGGAGGTAAGGAGAACCAGGACAGGAACAGGGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTGCCTGGAAAGCAACTaGGGTCGTCTTGGGGAGGAC | + |
Preference number: 4 (lower is better) Translates to: ITPLRKQLSLSATEEARVCLESN*GRLGED Trigger: GTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCA...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR TCA 90 bp | AACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCGGCAGGGCAGACAGCTaGTTTCGACTCAAGTTTAGG | + |
Preference number: 4 (lower is better) Translates to: NTSQKTALSVCHRRSTCFGRADS*FRLKFR Trigger: CCTAAACTTGAGTCGAAATCAGCTGTCTGCCCTGCC...GAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CCTCTCATCTTTACACTGCTATGCCATCTGACAAAACAGGCATTTGTGCAGTACGCTGCTTCATCTCCCTaGAGCAGACGGGGATCACCA | + |
Preference number: 4 (lower is better) Translates to: PLIFTLLCHLTKQAFVQYAASSP*SRRGSP Trigger: TGGTGATCCCCGTCTGCTTCAGGGAGATGAAGCAGC...GTACTGCACAAATGCCTGTTTTGTCAGATGGCATAGCAGTGTAAAGATGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR TCA 90 bp | AACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCCAGTCGTGCCCACTTTaGCCAGGCCTTTCTCTTCAA | + |
Preference number: 4 (lower is better) Translates to: NTSQKTALSVCHRRSTCFQSCPL*PGLSLQ Trigger: TTGAAGAGAAAGGCCTGGTCAAAGTGGGCACGACTG...GAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTAGGAGCACCTGCAGCTaGTTCATCTCCCTGAAGCAG | + |
Preference number: 4 (lower is better) Translates to: ITPLRKQLSLSATEEARVRSTCS*FISLKQ Trigger: CTGCTTCAGGGAGATGAAGCAGCTGCAGGTGCTCCT...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | TCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGGACACCATCCATGAGTaGCGCCCCCAGGTCTTCATG | + |
Preference number: 4 (lower is better) Translates to: SVYYIGGQEGCWNVGNWMDTIHE*RPQVFM Trigger: CATGAAGACCTGGGGGCGGCACTCATGGATGGTGTC...CATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTGTGAGGGGACATGGATaGTGGCGACAGATCTCGGAC | + |
Preference number: 4 (lower is better) Translates to: ARSLVLIKQTHATHCEMVVRGHG*WRQISD Trigger: GTCCGAGATCTGTCGCCAGCATCCATGTCCCCTCAC...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTGGTGACATCCAACAGTaGCTGAACAGTCGTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: ITPLRKQLSLSATEEARVGDIQQ*LNSRAH Trigger: GTGGGCACGACTGTTCAGGCACTGTTGGATGTCACC...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATCGCAGAGACTTCAGCTaGCCTATCTGCTGGGGCAAG | + |
Preference number: 4 (lower is better) Translates to: VSLLYWGTRGLLECRKLDRRDFS*PICWGK Trigger: CTTGCCCCAGCAGATAGGCCAGCTGAAGTCTCTGCG...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCGCTGCTTCATCTCCCTaGAGCAGACGGGGATCACCA | + |
Preference number: 4 (lower is better) Translates to: LSLSATEEARVSCLIFLSAASSP*SRRGSP Trigger: TGGTGATCCCCGTCTGCTTCAGGGAGATGAAGCAGC...GGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | TCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGCTCTCTTTCTTGTCCTaGGATGCCGCTGTCCCCCAA | + |
Preference number: 4 (lower is better) Translates to: SVYYIGGQEGCWNVGNWMLSFLS*DAAVPQ Trigger: TTGGGGGACAGCGGCATCTCAGGACAAGAAAGAGAG...CATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR CAA 72 bp | TGGCTTCCTGACTTGAGCTCTTACGGCCCTTGTAGCTaGATGGTCAACTTCAACCTGCTCCATGTTTTCATC | + |
Preference number: 4 (lower is better) Translates to: WLPDLSSYGPCS*MVNFNLLHVFI Trigger: GATGAAAACATGGAGCAGGTTGAAGTTGACCATCAAGCTACAAGGGCCGTAAGAGCTCAAGTCAGGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR TCA 90 bp | ACTTATCATACTACCAGCCAGCCATGCACATTTCATTGCACATATAGACATAGTGCCCCCAGGTCTTCATaGAGGGTCACCTTCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: TYHTTSQPCTFHCTYRHSAPRSS*RVTFSL Trigger: GAGGCTGAAGGTGACCCTTCATGAAGACCTGGGGGC...ACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR TCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTCAGTCGTGCCCACTTTaGCCAGGCCTTTCTCTTCAA | + |
Preference number: 4 (lower is better) Translates to: ARSLVLIKQTHATHCEMVQSCPL*PGLSLQ Trigger: TTGAAGAGAAAGGCCTGGTCAAAGTGGGCACGACTG...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTAACATTAGATCATTTTaGACCTCACGGTCTGGAGAC | + |
Preference number: 4 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGNIRSF*TSRSGD Trigger: GTCTCCAGACCGTGAGGTGCAAAATGATCTAATGTT...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | ACTTATCATACTACCAGCCAGCCATGCACATTTCATTGCACATATAGACATAGTTCTTGGGGAGGACTCTaGCTGCAGGCTGCCCTGTAC | + |
Preference number: 4 (lower is better) Translates to: TYHTTSQPCTFHCTYRHSSWGGL*LQAALY Trigger: GTACAGGGCAGCCTGCAGGCAGAGTCCTCCCCAAGA...ACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR TCA 90 bp | CATAGTCCTATGAAGCCTTCCTTGAAGGAAGCTCACCCACTGACAGGATGGGGTGTTAAGAATTTCCAGTaGTACAAATTGGCACAGCTC | + |
Preference number: 4 (lower is better) Translates to: HSPMKPSLKEAHPLTGWGVKNFQ*YKLAQL Trigger: GAGCTGTGCCAATTTGTATCACTGGAAATTCTTAAC...ACCCCATCCTGTCAGTGGGTGAGCTTCCTTCAAGGAAGGCTTCATAGGACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR TCA 90 bp | TCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGTTGCGATTAAGACTTTaGGAGGCAGACCACACAGGC | + |
Preference number: 4 (lower is better) Translates to: SVYYIGGQEGCWNVGNWMLRLRL*EADHTG Trigger: GCCTGTGTGGTCTGCCTCTCAAAGTCTTAATCGCAA...CATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | AGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTCATAACGCGGAGGGCAGAAGTTaGCTGTGGGGGTTTCTCCCC | + |
Preference number: 4 (lower is better) Translates to: RDFIVTEKYKIAPKTTHNAEGRS*LWGFLP Trigger: GGGGAGAAACCCCCACAGTCAACTTCTGCCCTCCGC...GTTATGAGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | ACTTATCATACTACCAGCCAGCCATGCACATTTCATTGCACATATAGACATAGTCGCAGAGACTTCAGCTaGCCTATCTGCTGGGGCAAG | + |
Preference number: 4 (lower is better) Translates to: TYHTTSQPCTFHCTYRHSRRDFS*PICWGK Trigger: CTTGCCCCAGCAGATAGGCCAGCTGAAGTCTCTGCG...ACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CCA 90 bp | TCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGAATGGGGCCTCTCTATaGTGGGGAGGTAAAGAGAGT | + |
Preference number: 4 (lower is better) Translates to: SVYYIGGQEGCWNVGNWMNGASL*WGGKES Trigger: ACTCTCTTTACCTCCCCACCATAGAGAGGCCCCATT...CATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | AACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCCCAGCTCCCGGTCTTTaGATGAATTTAGTAGTTCCT | + |
Preference number: 4 (lower is better) Translates to: NTSQKTALSVCHRRSTCFPAPGL*MNLVVP Trigger: AGGAACTACTAAATTCATCCAAAGACCGGGAGCTGG...GAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTCTTCTCCTGAGTCCATaGGGAACAGGTTCAAAATAC | + |
Preference number: 4 (lower is better) Translates to: TPLRKQLSLSATEEARVSLLLSP*GTGSKY Trigger: GTATTTTGAACCTGTTCCCCATGGACTCAGGAGAAG...AGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTTAGAAACACATGCCTaGAAAGCAACTGGGGTCGTC | + |
Preference number: 4 (lower is better) Translates to: ITPLRKQLSLSATEEARVLETHA*KATGVV Trigger: GACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAA...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | ACTTATCATACTACCAGCCAGCCATGCACATTTCATTGCACATATAGACATAGTTCAAGCAGGAGCACCTaGAGCTGCTTCATCTCCCTG | + |
Preference number: 4 (lower is better) Translates to: TYHTTSQPCTFHCTYRHSSSRST*SCFISL Trigger: CAGGGAGATGAAGCAGCTGCAGGTGCTCCTGCTTGA...ACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CCA 90 bp | TGTTGGCTTCCTGACTTGAGCTCTTACGGCCCTTGTAGCTTGATGGTCAACTTCTCATTGGGAGAATACTaGCTTCCATTACTCTGTAAC | + |
Preference number: 4 (lower is better) Translates to: CWLPDLSSYGPCSLMVNFSLGEY*LPLLCN Trigger: GTTACAGAGTAATGGAAGCCAGTATTCTCCCAATGA...GAAGTTGACCATCAAGCTACAAGGGCCGTAAGAGCTCAAGTCAGGAAGCCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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3UTR CAA 72 bp | AGGAACGTTCATATCTCAGCAAACTGGACATTTATCTaGACGGCATTAACACCACCACCTTCCCAACACGAG | + |
Preference number: 4 (lower is better) Translates to: RNVHISANWTFI*TALTPPPSQHE Trigger: CTCGTGTTGGGAAGGTGGTGGTGTTAATGCCGTCAAGATAAATGTCCAGTTTGCTGAGATATGAACGTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR GCA 90 bp | GTTCCAGGATCCATAGACTTATTTGAAACTGAAGAGTCAAATGCATCACATTCTATGCTCTCTCGGAGTTaGTCCACCAGCTCCTTCTCC | + |
Preference number: 4 (lower is better) Translates to: VPGSIDLFETEESNASHSMLSRS*STSSFS Trigger: GGAGAAGGAGCTGGTGGAGCAACTCCGAGAGAGCAT...AGAATGTGATGCATTTGACTCTTCAGTTTCAAATAAGTCTATGGATCCTGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR GCA 90 bp | AGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTCATAACGTGAGGGGACATGGATaGTGGCGACAGATCTCGGAC | + |
Preference number: 4 (lower is better) Translates to: RDFIVTEKYKIAPKTTHNVRGHG*WRQISD Trigger: GTCCGAGATCTGTCGCCAGCATCCATGTCCCCTCAC...GTTATGAGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTTCCTCCTTGATGGTCTaGTCTTCTTCCACGATGTTT | + |
Preference number: 4 (lower is better) Translates to: ARSLVLIKQTHATHCEMVSSLMV*SSSTMF Trigger: AAACATCGTGGAAGAAGACCAGACCATCAAGGAGGA...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATTCCTCCTTGATGGTCTaGTCTTCTTCCACGATGTTT | + |
Preference number: 4 (lower is better) Translates to: VSLLYWGTRGLLECRKLDSSLMV*SSSTMF Trigger: AAACATCGTGGAAGAAGACCAGACCATCAAGGAGGA...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGCCAGCTCCCGGTCTTTaGATGAATTTAGTAGTTCCT | + |
Preference number: 4 (lower is better) Translates to: SVYYIGGQEGCWNVGNWMPAPGL*MNLVVP Trigger: AGGAACTACTAAATTCATCCAAAGACCGGGAGCTGG...CATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTATTAACTGTTTGAGCTaGCCTATCTCTTCAGGCAGT | + |
Preference number: 4 (lower is better) Translates to: ARSLVLIKQTHATHCEMVINCLS*PISSGS Trigger: ACTGCCTGAAGAGATAGGTCAGCTCAAACAGTTAAT...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR TCA 90 bp | CCTCTCATCTTTACACTGCTATGCCATCTGACAAAACAGGCATTTGTGCAGTACACTCCATTAACTGTTTaGGCTGACCTATCTCTTCAG | + |
Preference number: 4 (lower is better) Translates to: PLIFTLLCHLTKQAFVQYTPLTV*ADLSLQ Trigger: CTGAAGAGATAGGTCAGCTCAAACAGTTAATGGAGT...GTACTGCACAAATGCCTGTTTTGTCAGATGGCATAGCAGTGTAAAGATGAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | TGCAGAAATATAAATAAGAACGATGTTCCACAAACCAAAAGGTGGATAACACCTGGTGACATCCAACAGTaGCTGAACAGTCGTGCCCAC | + |
Preference number: 4 (lower is better) Translates to: CRNINKNDVPQTKRWITPGDIQQ*LNSRAH Trigger: GTGGGCACGACTGTTCAGGCACTGTTGGATGTCACC...AGGTGTTATCCACCTTTTGGTTTGTGGAACATCGTTCTTATTTATATTTCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | CTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCTCCAGTGATACAAATTaGCACAGCTCCATTGGCACT | + |
Preference number: 4 (lower is better) Translates to: LSLSATEEARVSCLIFLSSSDTN*HSSIGT Trigger: AGTGCCAATGGAGCTGTGCCAATTTGTATCACTGGA...GGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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3UTR CAA 72 bp | AAACGAGTATGTCTACATTTTGGCATCTCTTGTTCTTaGAACACCAGCAGTTGTACGTCCATGTTGGCTTCC | + |
Preference number: 4 (lower is better) Translates to: KRVCLHFGISCS*NTSSCTSMLAS Trigger: GGAAGCCAACATGGACGTACAACTGCTGGTGTTCAAAGAACAAGAGATGCCAAAATGTAGACATACTCGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR GCA 90 bp | ACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGTCTTAATCTGGCATaGTTGTATGCTCAAATACTT | + |
Preference number: 4 (lower is better) Translates to: TPLRKQLSLSATEEARVSCLNLA*LYAQIL Trigger: AAGTATTTGAGCATACAAGCATGCCAGATTAAGACA...AGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR GCA 90 bp | GTTCCAGGATCCATAGACTTATTTGAAACTGAAGAGTCAAATGCATCACATTCTTTCTCCTCTCTCATCTaGTCCATCTTCCTCCGGATC | + |
Preference number: 4 (lower is better) Translates to: VPGSIDLFETEESNASHSFSSLI*SIFLRI Trigger: GATCCGGAGGAAGATGGAGCAGATGAGAGAGGAGAA...AGAATGTGATGCATTTGACTCTTCAGTTTCAAATAAGTCTATGGATCCTGGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATTCACTTGTCTTAATCTaGCATGCTTGTATGCTCAAA | + |
Preference number: 4 (lower is better) Translates to: VSLLYWGTRGLLECRKLDSLVLI*HACMLK Trigger: TTTGAGCATACAAGCATGCCAGATTAAGACAAGTGA...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | GTTCCAGGATCCATAGACTTATTTGAAACTGAAGAGTCAAATGCATCACATTCTCTTCTCCTGAGTCCATaGGGAACAGGTTCAAAATAC | + |
Preference number: 4 (lower is better) Translates to: VPGSIDLFETEESNASHSLLLSP*GTGSKY Trigger: GTATTTTGAACCTGTTCCCCATGGACTCAGGAGAAG...AGAATGTGATGCATTTGACTCTTCAGTTTCAAATAAGTCTATGGATCCTGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR GCA 90 bp | CTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCTGTCTTAATCTGGCATaGTTGTATGCTCAAATACTT | + |
Preference number: 4 (lower is better) Translates to: LSLSATEEARVSCLIFLSCLNLA*LYAQIL Trigger: AAGTATTTGAGCATACAAGCATGCCAGATTAAGACA...GGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TGCAGAAATATAAATAAGAACGATGTTCCACAAACCAAAAGGTGGATAACACCTTCCAGTGATACAAATTaGCACAGCTCCATTGGCACT | + |
Preference number: 4 (lower is better) Translates to: CRNINKNDVPQTKRWITPSSDTN*HSSIGT Trigger: AGTGCCAATGGAGCTGTGCCAATTTGTATCACTGGA...AGGTGTTATCCACCTTTTGGTTTGTGGAACATCGTTCTTATTTATATTTCTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CCA 90 bp | TCTACATTTTGGCATCTCTTGTTCTTTGAACACCAGCAGTTGTACGTCCATGTTTCACTTGTCTTAATCTaGCATGCTTGTATGCTCAAA | + |
Preference number: 4 (lower is better) Translates to: STFWHLLFFEHQQLYVHVSLVLI*HACMLK Trigger: TTTGAGCATACAAGCATGCCAGATTAAGACAAGTGA...AACATGGACGTACAACTGCTGGTGTTCAAAGAACAAGAGATGCCAAAATGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CCA 90 bp | TTTCTCAGCTTCAGAACACCACCTAATAAAAAGGAAAAGCGGGCTAAGCAGATCACTATAAGGAGAACATaGATAAGACAGAAGCCTATA | + |
Preference number: 4 (lower is better) Translates to: FLSFRTPPNKKEKRAKQITIRRT*IRQKPI Trigger: TATAGGCTTCTGTCTTATCCATGTTCTCCTTATAGT...GATCTGCTTAGCCCGCTTTTCCTTTTTATTAGGTGGTGTTCTGAAGCTGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR GCA 90 bp | AGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTCATAACAACATTAGATCATTTTaGACCTCACGGTCTGGAGAC | + |
Preference number: 4 (lower is better) Translates to: RDFIVTEKYKIAPKTTHNNIRSF*TSRSGD Trigger: GTCTCCAGACCGTGAGGTGCAAAATGATCTAATGTT...GTTATGAGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CCA 90 bp | GTACAAAGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTCCGGATCGTAAACTGTaGGTCTATAGATTCCAAGTT | + |
Preference number: 4 (lower is better) Translates to: VQRDFIVTEKYKIAPKTTPDRKL*VYRFQV Trigger: AACTTGGAATCTATAGACCCACAGTTTACGATCCGG...AGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCTTTGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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3UTR CAA 72 bp | ATAATAAAAACGAGTATGTCTACATTTTGGCATCTCTaGTTCTTTGAACACCAGCAGTTGTACGTCCATGTT | + |
Preference number: 4 (lower is better) Translates to: IIKTSMSTFWHL*FFEHQQLYVHV Trigger: AACATGGACGTACAACTGCTGGTGTTCAAAGAACAAGAGATGCCAAAATGTAGACATACTCGTTTTTATTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS TCA 90 bp | CCGCCTCCTCCAGCGCGCGCTCCAAACCACGGTTCAAGGGCAGGTTaGAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTGGT | + |
Preference number: 5 (lower is better) Translates to: PPPPARAPNHGSRAG*SRCRRCLRGAGGVG Trigger: ACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCTGCCCTTGAACCGTGGTTTGGAGCGCGCGCTGGAGGAGGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | CCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTGGTGGTGTTaGTGGTGCTGGTGGAGATGCGGGTGCAGGGCGGTTACCGAGAGA | + |
Preference number: 5 (lower is better) Translates to: PVPPVPPWCWWCWWC*WCWWRCGCRAVTER Trigger: TCTCTCGGTAACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | TTGAAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTGGTaGTGTTGGTGGTGCTGGTGGAGATGCGGGTGCAGGGCGGTTACC | + |
Preference number: 5 (lower is better) Translates to: LKPVPPVPPWCWWCW*CWWCWWRCGCRAVT Trigger: GGTAACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | AGGTTGAAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTaGTGGTGTTGGTGGTGCTGGTGGAGATGCGGGTGCAGGGCGGTT | + |
Preference number: 5 (lower is better) Translates to: RLKPVPPVPPWCWWC*WCWWCWWRCGCRAV Trigger: AACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | AAGGGCAGGTTGAAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTaGTGTTGGTGGTGTTGGTGGTGCTGGTGGAGATGCGGGTGCAGG | + |
Preference number: 5 (lower is better) Translates to: KGRLKPVPPVPPWCW*CWWCWWCWWRCGCR Trigger: CCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCTGCCCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | CAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCACCCAGAGGAGCGGGCGCGAAAGCTaGGGGTTCGCTTCCCGGCGT | + |
Preference number: 5 (lower is better) Translates to: QEQSPESLLWEEAEPTQRSGRES*GFASRR Trigger: ACGCCGGGAAGCGAACCCCAAGCTTTCGCGCCCGCT...CCTCTGGGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | TTCAAGGGCAGGTTGAAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTaGTGGTGTTGGTGGTGTTGGTGGTGCTGGTGGAGATGCGGGTGC | + |
Preference number: 5 (lower is better) Translates to: FKGRLKPVPPVPPWC*WCWWCWWCWWRCGC Trigger: GCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCTGCCCTTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | GCCGGTGAGGGGACATGGATGCTGGCGACAGATCTCGGACGGACGTaGTTGGCCAGGTGGCAGAGGACGACACCATCCATGAGTGCCGCC | + |
Preference number: 5 (lower is better) Translates to: AGEGTWMLATDLGRT*LARWQRTTPSMSAA Trigger: GGCGGCACTCATGGATGGTGTCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATCTGTCGCCAGCATCCATGTCCCCTCACCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTAGCGGGCGCGAAAGCTaGGGGTTCGCTTCCCGGCGT | + |
Preference number: 5 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGSGRES*GFASRR Trigger: ACGCCGGGAAGCGAACCCCAAGCTTTCGCGCCCGCT...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | ACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCACGGTTCAAGGGCAGGTaGAAGCCGGTGCCGCCGGTG | + |
Preference number: 5 (lower is better) Translates to: TGARSRVQSPCSGKRLSPRFKGR*KPVPPV Trigger: CACCGGCGGCACCGGCTTCAACCTGCCCTTGAACCG...TGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | CAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAGAGGCTGAGCCCACCCAGAGGGGGGACTGCAGAGGGTaGTTCTCAAGCAGGAGCACC | + |
Preference number: 5 (lower is better) Translates to: QEQSPESLLWEEAEPTQRGDCRG*FSSRST Trigger: GGTGCTCCTGCTTGAGAACAACCCTCTGCAGTCCCC...CCTCTGGGTGGGCTCAGCCTCTTCCCAGAGCAGGGACTCTGGACTCTGCTCCTG 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 90 bp | ACGGACGTGGTTGGCCAGGTGGCAGAGGACGACACCATCCATGAGTaGCGCCCCCAGGTCTTCATGAAGGGTCACCTTCAGCCTCATCTC | + |
Preference number: 5 (lower is better) Translates to: TDVVGQVAEDDTIHE*RPQVFMKGHLQPHL Trigger: GAGATGAGGCTGAAGGTGACCCTTCATGAAGACCTGGGGGCGGCACTCATGGATGGTGTCGTCCTCTGCCACCTGGCCAACCACGTCCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS CCA 90 bp | CTGCACTTGGCCATGCTGAGTTTAGGAACAGCCGGTGAGGGGACATaGATGCTGGCGACAGATCTCGGACGGACGTGGTTGGCCAGGTGG | + |
Preference number: 5 (lower is better) Translates to: LHLAMLSLGTAGEGT*MLATDLGRTWLARW Trigger: CCACCTGGCCAACCACGTCCGTCCGAGATCTGTCGCCAGCATCCATGTCCCCTCACCGGCTGTTCCTAAACTCAGCATGGCCAAGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS TCA 90 bp | CTCTGCCTGCAGGCTGCCCTGTACCTCCTCAGGGCACCAGGAACCTaGACGAGGCTTCAGGCCAAACGGAGCTGTGATGTTTGCAGTAGG | + |
Preference number: 5 (lower is better) Translates to: LCLQAALYLLRAPGT*TRLQAKRSCDVCSR Trigger: CCTACTGCAAACATCACAGCTCCGTTTGGCCTGAAGCCTCGTTCAGGTTCCTGGTGCCCTGAGGAGGTACAGGGCAGCCTGCAGGCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS TCA 90 bp | TGGCAGAGGACGACACCATCCATGAGTGCCGCCCCCAGGTCTTCATaGAGGGTCACCTTCAGCCTCATCTCGATGCTCTCTCGGAGTTGC | + |
Preference number: 5 (lower is better) Translates to: WQRTTPSMSAAPRSS*RVTFSLISMLSRSC Trigger: GCAACTCCGAGAGAGCATCGAGATGAGGCTGAAGGTGACCCTTCATGAAGACCTGGGGGCGGCACTCATGGATGGTGTCGTCCTCTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTACGTTCCTCCTGCACTaGGCCATGCTGAGTTTAGGA | + |
Preference number: 5 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGTFLLH*AMLSLG Trigger: TCCTAAACTCAGCATGGCCAAGTGCAGGAGGAACGT...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | GATAAGACAGAAGCCTATAAGGTCCCTGGAGCGGAGGGCAGAAGTTaGCTGTGGGGGTTTCTCCCCGAGGGCCAGCAGAGTGTCAACAGT | + |
Preference number: 5 (lower is better) Translates to: DKTEAYKVPGAEGRS*LWGFLPEGQQSVNS Trigger: ACTGTTGACACTCTGCTGGCCCTCGGGGAGAAACCCCCACAGTCAACTTCTGCCCTCCGCTCCAGGGACCTTATAGGCTTCTGTCTTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS GCA 90 bp | TGTCATACGGAGAGCACAGGTCGGCCTCGGGAACGCCAAGTTTCCTaGACGCTTCCAAGAAGTTTTCCACGTTCCTCCTGCACTTGGCCA | + |
Preference number: 5 (lower is better) Translates to: CHTESTGRPRERQVS*TLPRSFPRSSCTWP Trigger: TGGCCAAGTGCAGGAGGAACGTGGAAAACTTCTTGGAAGCGTGCAGGAAACTTGGCGTTCCCGAGGCCGACCTGTGCTCTCCGTATGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS CCA 90 bp | TCCAAGTTTCTCTGCGGTCTTAGAAACACATGCCTGGAAAGCAACTaGGGTCGTCTTGGGGAGGACTCTGCCTGCAGGCTGCCCTGTACC | + |
Preference number: 5 (lower is better) Translates to: SKFLCGLRNTCLESN*GRLGEDSACRLPCT Trigger: GGTACAGGGCAGCCTGCAGGCAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAAGACCGCAGAGAAACTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CAA 90 bp | TGCTGCTACTCAGTTCTCCGCCAGCTCCCTGACCCGCTGTCAGGTAACACCTGCGGCAGTGATCCGAGCTaGTTGTTGCTTGCGATTAAG | + |
Preference number: 5 (lower is better) Translates to: CCYSVLRQLPDPLSGNTCGSDPS*LLLAIK Trigger: CTTAATCGCAAGCAACAACAAGCTCGGATCACTGCC...GCAGGTGTTACCTGACAGCGGGTCAGGGAGCTGGCGGAGAACTGAGTAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAAACCGCTTATCTCCATaGTCACTTCCAACCCCTGAG | + |
Preference number: 5 (lower is better) Translates to: LGSRYRCQEQSPESLLWENRLSP*SLPTPE Trigger: CTCAGGGGTTGGAAGTGACAATGGAGATAAGCGGTT...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | ACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTCTCGGACGGACGTGGTaGGCCAGGTGGCAGAGGACG | + |
Preference number: 5 (lower is better) Translates to: TPLRKQLSLSATEEARVSLGRTW*ARWQRT Trigger: CGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAG...AGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | CTTAGGCTGAAACCACGCCAGTGCAGTTCCTCCTCCGGGACCTGGCAGGGAGGTGATCCGAGCTTGTTGTaGCTTGCGATTAAGACTTTG | + |
Preference number: 5 (lower is better) Translates to: LRLKPRQCSSSSGTWQGGDPSLL*LAIKTL Trigger: CAAAGTCTTAATCGCAAGCAACAACAAGCTCGGATC...ACCTCCCTGCCAGGTCCCGGAGGAGGAACTGCACTGGCGTGGTTTCAGCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | GAGGGTTGTTCTCAAGCAGGAGCACCTGCAGCTGCTTCATCTCCCTaGAGCAGACGGGGATCACCAGCACCTTGTTGCAGGAAAAGTCAA | + |
Preference number: 5 (lower is better) Translates to: EGCSQAGAPAAASSP*SRRGSPAPCCRKSQ Trigger: TTGACTTTTCCTGCAACAAGGTGCTGGTGATCCCCGTCTGCTTCAGGGAGATGAAGCAGCTGCAGGTGCTCCTGCTTGAGAACAACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | ATGGCACGCATCCTCCTTGATGGTCTGGTCTTCTTCCACGATGTTTaGCATGGGCGCATTGAGGCTAACCGTGTCCTCATCAGAGGGCTC | + |
Preference number: 5 (lower is better) Translates to: MARILLDGLVFFHDV*HGRIEANRVLIRGL Trigger: GAGCCCTCTGATGAGGACACGGTTAGCCTCAATGCGCCCATGTCAAACATCGTGGAAGAAGACCAGACCATCAAGGAGGATGCGTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 90 bp | TTTCTTCGGACATTGAGTTCCCGCAGAGACTTCAGCTGGCCTATCTaGTGGGGCAAGGCCGTGATCTCGTTGCAACTCACATCCAACTCC | + |
Preference number: 5 (lower is better) Translates to: FLRTLSSRRDFSWPI*WGKAVISLQLTSNS Trigger: GGAGTTGGATGTGAGTTGCAACGAGATCACGGCCTTGCCCCAGCAGATAGGCCAGCTGAAGTCTCTGCGGGAACTCAATGTCCGAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 90 bp | TGTGATGAGGCAGGCAGAGCTTTTCCTCGGGAACGCCAAGTTTCCTaGACGCTTCCAAGAAGTTTTCCACGTTCCTCCTGCACTTGGCCA | + |
Preference number: 5 (lower is better) Translates to: CDEAGRAFPRERQVS*TLPRSFPRSSCTWP Trigger: TGGCCAAGTGCAGGAGGAACGTGGAAAACTTCTTGGAAGCGTGCAGGAAACTTGGCGTTCCCGAGGAAAAGCTCTGCCTGCCTCATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | CTTCGGACATTGAGTTCCCGCAGAGACTTCAGCTGGCCTATCTGCTaGGGCAAGGCCGTGATCTCGTTGCAACTCACATCCAACTCCATT | + |
Preference number: 5 (lower is better) Translates to: LRTLSSRRDFSWPIC*GKAVISLQLTSNSI Trigger: AATGGAGTTGGATGTGAGTTGCAACGAGATCACGGCCTTGCCCCAGCAGATAGGCCAGCTGAAGTCTCTGCGGGAACTCAATGTCCGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | CCTTTAGTTGGGGTGAGCCGATGGCACGCATCCTCCTTGATGGTCTaGTCTTCTTCCACGATGTTTGACATGGGCGCATTGAGGCTAACC | + |
Preference number: 5 (lower is better) Translates to: PLVGVSRWHASSLMV*SSSTMFDMGALRLT Trigger: GGTTAGCCTCAATGCGCCCATGTCAAACATCGTGGAAGAAGACCAGACCATCAAGGAGGATGCGTGCCATCGGCTCACCCCAACTAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 90 bp | GCTGTCCCCCAAAATGGAAGGCTTCGGCTGAAATTCTCCTTTAGTTaGGGTGAGCCGATGGCACGCATCCTCCTTGATGGTCTGGTCTTC | + |
Preference number: 5 (lower is better) Translates to: AVPQNGRLRLKFSFS*GEPMARILLDGLVF Trigger: GAAGACCAGACCATCAAGGAGGATGCGTGCCATCGGCTCACCCCAACTAAAGGAGAATTTCAGCCGAAGCCTTCCATTTTGGGGGACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATTTCAAGCCCCCAGAGTaGGCCGCCTCCTCCAGCGCG | + |
Preference number: 5 (lower is better) Translates to: VSLLYWGTRGLLECRKLDFKPPE*AASSSA Trigger: CGCGCTGGAGGAGGCGGCCAACTCTGGGGGCTTGAA...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | TTGGGGAGCAGGTACAGGTGCCAGGAGCAGAGTCCAGAGTCCCTGCTCTGGGAAAGTGATCCGAGCTTGTaGTTGCTTGCGATTAAGACT | + |
Preference number: 5 (lower is better) Translates to: LGSRYRCQEQSPESLLWESDPSL*LLAIKT Trigger: AGTCTTAATCGCAAGCAACAACAAGCTCGGATCACT...TTCCCAGAGCAGGGACTCTGGACTCTGCTCCTGGCACCTGTACCTGCTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | GGTTTCTCCCCGAGGGCCAGCAGAGTGTCAACAGTCTTTCGAATGTaGCGAAAATCCAACTGCAGGATGTCATACGGAGAGCACAGGTCG | + |
Preference number: 5 (lower is better) Translates to: GFSPRASRVSTVFRM*RKSNCRMSYGEHRS Trigger: CGACCTGTGCTCTCCGTATGACATCCTGCAGTTGGATTTTCGTCACATTCGAAAGACTGTTGACACTCTGCTGGCCCTCGGGGAGAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CAA 90 bp | TGTTGGCTTCCTGACTTGAGCTCTTACGGCCCTTGTAGCTTGATGGTCAACTTCGATGCTCTCTCGGAGTaGCTCCACCAGCTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: CWLPDLSSYGPCSLMVNFDALSE*LHQLLL Trigger: GAGAAGGAGCTGGTGGAGCAACTCCGAGAGAGCATC...GAAGTTGACCATCAAGCTACAAGGGCCGTAAGAGCTCAAGTCAGGAAGCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CAA 90 bp | TTTCTCAGCTTCAGAACACCACCTAATAAAAAGGAAAAGCGGGCTAAGCAGATCCTCGGACGGACGTGGTaGGCCAGGTGGCAGAGGACG | + |
Preference number: 5 (lower is better) Translates to: FLSFRTPPNKKEKRAKQILGRTW*ARWQRT Trigger: CGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAG...GATCTGCTTAGCCCGCTTTTCCTTTTTATTAGGTGGTGTTCTGAAGCTGAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CAA 90 bp | CTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCCTCGGACGGACGTGGTaGGCCAGGTGGCAGAGGACG | + |
Preference number: 5 (lower is better) Translates to: LSLSATEEARVSCLIFLSLGRTW*ARWQRT Trigger: CGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAG...GGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 90 bp | AATATGTGTACTTTTCCTTTCGTGCAAATCTGCGCCGGAGGGGACTaGAGAGGGTTGTTCTCAAGCAGGAGCACCTGCAGCTGCTTCATC | + |
Preference number: 5 (lower is better) Translates to: NMCTFPFVQICAGGD*RGLFSSRSTCSCFI Trigger: GATGAAGCAGCTGCAGGTGCTCCTGCTTGAGAACAACCCTCTGCAGTCCCCTCCGGCGCAGATTTGCACGAAAGGAAAAGTACACATATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 90 bp | TGTGGGTCTATAGATTCCAAGTTTCTCTGCGGTCTTAGAAACACATaGCTGGAAAGCAACTGGGGTCGTCTTGGGGAGGACTCTGCCTGC | + |
Preference number: 5 (lower is better) Translates to: CGSIDSKFLCGLRNT*LESNWGRLGEDSAC Trigger: GCAGGCAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAAGACCGCAGAGAAACTTGGAATCTATAGACCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS TCA 90 bp | ACTTTGAGAGGCAGACCACACAGGCAGGCGGGCAGGGCAGACAGCTaGTTTCGACTCAAGTTTAGGTGGGTCAACATCTGCAAATTAACA | + |
Preference number: 5 (lower is better) Translates to: TLRGRPHRQAGRADS*FRLKFRWVNICKLT Trigger: TGTTAATTTGCAGATGTTGACCCACCTAAACTTGAGTCGAAATCAGCTGTCTGCCCTGCCCGCCTGCCTGTGTGGTCTGCCTCTCAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | AGGCTTCAGGCCAAACGGAGCTGTGATGTTTGCAGTAGGAGACACTaGAGGGGAGTTCTCTCGTATCTCATTGGGAGAATACTGGCTTCC | + |
Preference number: 5 (lower is better) Translates to: RLQAKRSCDVCSRRH*RGVLSYLIGRILAS Trigger: GGAAGCCAGTATTCTCCCAATGAGATACGAGAGAACTCCCCTTCAGTGTCTCCTACTGCAAACATCACAGCTCCGTTTGGCCTGAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGGGGACTGCAGAGGGTaGTTCTCAAGCAGGAGCACC | + |
Preference number: 5 (lower is better) Translates to: VSLLYWGTRGLLECRKLDGDCRG*FSSRST Trigger: GGTGCTCCTGCTTGAGAACAACCCTCTGCAGTCCCC...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | TGTTGGCTTCCTGACTTGAGCTCTTACGGCCCTTGTAGCTTGATGGTCAACTTCACAGTCGTGCCCACTTaGACCAGGCCTTTCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: CWLPDLSSYGPCSLMVNFTVVPT*TRPFSS Trigger: TGAAGAGAAAGGCCTGGTCAAAGTGGGCACGACTGT...GAAGTTGACCATCAAGCTACAAGGGCCGTAAGAGCTCAAGTCAGGAAGCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS CCA 90 bp | CCTCTCTCAGCTGCTCAATCATCGCTATATCCAGCTCCCGGTCTTTaGATGAATTTAGTAGTTCCTCCATGTGCCAGTGAGCATCCTCTT | + |
Preference number: 5 (lower is better) Translates to: PLSAAQSSLYPAPGL*MNLVVPPCASEHPL Trigger: AAGAGGATGCTCACTGGCACATGGAGGAACTACTAAATTCATCCAAAGACCGGGAGCTGGATATAGCGATGATTGAGCAGCTGAGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | TGCAGAAATATAAATAAGAACGATGTTCCACAAACCAAAAGGTGGATAACACCTCGGTTCAAGGGCAGGTaGAAGCCGGTGCCGCCGGTG | + |
Preference number: 5 (lower is better) Translates to: CRNINKNDVPQTKRWITPRFKGR*KPVPPV Trigger: CACCGGCGGCACCGGCTTCAACCTGCCCTTGAACCG...AGGTGTTATCCACCTTTTGGTTTGTGGAACATCGTTCTTATTTATATTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | CTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTTCTTGCTTAATTTTTCTTTCCGATGCTCTCTCGGAGTaGCTCCACCAGCTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: LSLSATEEARVSCLIFLSDALSE*LHQLLL Trigger: GAGAAGGAGCTGGTGGAGCAACTCCGAGAGAGCATC...GGAAAGAAAAATTAAGCAAGAAACACGTGCTTCTTCTGTGGCAGACAGAGAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | AACCCTGTATTCACCATCAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACGTTCCTCCTGCACTaGGCCATGCTGAGTTTAGGA | + |
Preference number: 5 (lower is better) Translates to: NPVFTINTMLGGRGSDNLTFLLH*AMLSLG Trigger: TCCTAAACTCAGCATGGCCAAGTGCAGGAGGAACGT...TAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTGATGGTGAATACAGGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CAA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTACAGTCGTGCCCACTTaGACCAGGCCTTTCTCTTCA | + |
Preference number: 5 (lower is better) Translates to: ITPLRKQLSLSATEEARVTVVPT*TRPFSS Trigger: TGAAGAGAAAGGCCTGGTCAAAGTGGGCACGACTGT...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | GTGATCTCGTTGCAACTCACATCCAACTCCATTAACTGTTTGAGCTaGCCTATCTCTTCAGGCAGTGATCCGAGCTTGTTGTTGCTTGCG | + |
Preference number: 5 (lower is better) Translates to: VISLQLTSNSINCLS*PISSGSDPSLLLLA Trigger: CGCAAGCAACAACAAGCTCGGATCACTGCCTGAAGAGATAGGTCAGCTCAAACAGTTAATGGAGTTGGATGTGAGTTGCAACGAGATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 90 bp | TTCCTCCGGATCGTAAACTGTGGGTCTATAGATTCCAAGTTTCTCTaGGGTCTTAGAAACACATGCCTGGAAAGCAACTGGGGTCGTCTT | + |
Preference number: 5 (lower is better) Translates to: FLRIVNCGSIDSKFL*GLRNTCLESNWGRL Trigger: AAGACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAAGACCGCAGAGAAACTTGGAATCTATAGACCCACAGTTTACGATCCGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CAA 90 bp | ATAACACCTCTCAGAAAACAGCTCTCTCTGTCTGCCACAGAAGAAGCACGTGTTAGCTGCAACTGGCCATaGAGTGAAGGATCAGGGAAT | + |
Preference number: 5 (lower is better) Translates to: ITPLRKQLSLSATEEARVSCNWP*SEGSGN Trigger: ATTCCCTGATCCTTCACTCAATGGCCAGTTGCAGCT...AACACGTGCTTCTTCTGTGGCAGACAGAGAGAGCTGTTTTCTGAGAGGTGTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATACGTTCCTCCTGCACTaGGCCATGCTGAGTTTAGGA | + |
Preference number: 5 (lower is better) Translates to: VSLLYWGTRGLLECRKLDTFLLH*AMLSLG Trigger: TCCTAAACTCAGCATGGCCAAGTGCAGGAGGAACGT...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | AAAATACTTCTCTCTATGATATCTGCGCTTAGACCGTTGGGATCCTaGAGCAGCTCTGCCTCTCTCAGCTGCTCAATCATCGCTATATCC | + |
Preference number: 5 (lower is better) Translates to: KILLSMISALRPLGS*SSSASLSCSIIAIS Trigger: GGATATAGCGATGATTGAGCAGCTGAGAGAGGCAGAGCTGCTTCAGGATCCCAACGGTCTAAGCGCAGATATCATAGAGAGAAGTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATGGCAGTGATCCGAGCTaGTTGTTGCTTGCGATTAAG | + |
Preference number: 5 (lower is better) Translates to: VSLLYWGTRGLLECRKLDGSDPS*LLLAIK Trigger: CTTAATCGCAAGCAACAACAAGCTCGGATCACTGCC...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | GTCAGTTTATTATATTGGGGGACAAGAGGGCTGCTGGAATGTAGGAAACTGGATAACCGCTTATCTCCATaGTCACTTCCAACCCCTGAG | + |
Preference number: 5 (lower is better) Translates to: VSLLYWGTRGLLECRKLDNRLSP*SLPTPE Trigger: CTCAGGGGTTGGAAGTGACAATGGAGATAAGCGGTT...ATCCAGTTTCCTACATTCCAGCAGCCCTCTTGTCCCCCAATATAATAAACTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | CAACACAATGCTGGGAGGAAGAGGCTCAGACAATCTAACATCTTATGGCATAAAAGCTGCAACTGGCCATaGAGTGAAGGATCAGGGAAT | + |
Preference number: 5 (lower is better) Translates to: QHNAGRKRLRQSNILWHKSCNWP*SEGSGN Trigger: ATTCCCTGATCCTTCACTCAATGGCCAGTTGCAGCT...TTTATGCCATAAGATGTTAGATTGTCTGAGCCTCTTCCTCCCAGCATTGTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CAA 90 bp | GTTCCAGGATCCATAGACTTATTTGAAACTGAAGAGTCAAATGCATCACATTCTGATGCTCTCTCGGAGTaGCTCCACCAGCTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: VPGSIDLFETEESNASHSDALSE*LHQLLL Trigger: GAGAAGGAGCTGGTGGAGCAACTCCGAGAGAGCATC...AGAATGTGATGCATTTGACTCTTCAGTTTCAAATAAGTCTATGGATCCTGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CAA 90 bp | GTACAAAGGGATTTTATTGTTACAGAAAAGTACAAGATAGCACCAAAGACGACTAGCGGAGGGCAGAAGTaGACTGTGGGGGTTTCTCCC | + |
Preference number: 5 (lower is better) Translates to: VQRDFIVTEKYKIAPKTTSGGQK*TVGVSP Trigger: GGGAGAAACCCCCACAGTCAACTTCTGCCCTCCGCT...AGTCGTCTTTGGTGCTATCTTGTACTTTTCTGTAACAATAAAATCCCTTTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS-3UTR CAA 90 bp | GCAAGGAGTTTGGTTTTGATAAAACAGACGCACGCGACTCACTGTGAAATGGTTGATCCGAGCTTGTTGTaGCTTGCGATTAAGACTTTG | + |
Preference number: 5 (lower is better) Translates to: ARSLVLIKQTHATHCEMVDPSLL*LAIKTL Trigger: CAAAGTCTTAATCGCAAGCAACAACAAGCTCGGATC...AACCATTTCACAGTGAGTCGCGTGCGTCTGTTTTATCAAAACCAAACTCCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | AGGAATGACTCTGATACAGTTGTGATACAGGTTAAGAATTTCCAGTaGTACAAATTGGCACAGCTCCATTGGCACTTCCACCAGTCTGTT | + |
Preference number: 5 (lower is better) Translates to: RNDSDTVVIQVKNFQ*YKLAQLHWHFHQSV Trigger: AACAGACTGGTGGAAGTGCCAATGGAGCTGTGCCAATTTGTATCACTGGAAATTCTTAACCTGTATCACAACTGTATCAGAGTCATTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS-3UTR CAA 90 bp | ACTTATCATACTACCAGCCAGCCATGCACATTTCATTGCACATATAGACATAGTAGTGATCCGAGCTTGTaGTTGCTTGCGATTAAGACT | + |
Preference number: 5 (lower is better) Translates to: TYHTTSQPCTFHCTYRHSSDPSL*LLAIKT Trigger: AGTCTTAATCGCAAGCAACAACAAGCTCGGATCACT...ACTATGTCTATATGTGCAATGAAATGTGCATGGCTGGCTGGTAGTATGATAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS-3UTR CAA 90 bp | TGCAGAAATATAAATAAGAACGATGTTCCACAAACCAAAAGGTGGATAACACCTAGCTGCAACTGGCCATaGAGTGAAGGATCAGGGAAT | + |
Preference number: 5 (lower is better) Translates to: CRNINKNDVPQTKRWITPSCNWP*SEGSGN Trigger: ATTCCCTGATCCTTCACTCAATGGCCAGTTGCAGCT...AGGTGTTATCCACCTTTTGGTTTGTGGAACATCGTTCTTATTTATATTTCTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 90 bp | ATCTGCAAATTAACAATGGCCTCAGGAATGACTCTGATACAGTTGTaGTACAGGTTAAGAATTTCCAGTGATACAAATTGGCACAGCTCC | + |
Preference number: 5 (lower is better) Translates to: ICKLTMASGMTLIQL*YRLRISSDTNWHSS Trigger: GGAGCTGTGCCAATTTGTATCACTGGAAATTCTTAACCTGTATCACAACTGTATCAGAGTCATTCCTGAGGCCATTGTTAATTTGCAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 90 bp | GCCGCCTCCTCCAGCGCGCGCTCCAAACCACGGTTCAAGGGCAGGTaGAAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTGG | + |
Preference number: 6 (lower is better) Translates to: AASSSARSKPRFKGR*KPVPPVPPWCWWCW Trigger: CCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCTGCCCTTGAACCGTGGTTTGGAGCGCGCGCTGGAGGAGGCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 90 bp | GCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTGGTGGTGTaGGTGGTGCTGGTGGAGATGCGGGTGCAGGGCGGTTACCGAGAG | + |
Preference number: 6 (lower is better) Translates to: AGAAGASVVLVVLVV*VVLVEMRVQGGYRE Trigger: CTCTCGGTAACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 72 bp | CCAGCGCGCGCTCCAAACCACGGTTCAAGGGCAGGTTaGAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGT | + |
Preference number: 6 (lower is better) Translates to: PARAPNHGSRAG*SRCRRCLRGAG Trigger: ACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCTGCCCTTGAACCGTGGTTTGGAGCGCGCGCTGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | CCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTaGTGGTGTTGGTGGTGCTGGTGGAGATGCGGGTGC | + |
Preference number: 6 (lower is better) Translates to: PVPPVPPWCWWC*WCWWCWWRCGC Trigger: GCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 72 bp | GCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTaGGTGGTGTTGGTGGTGCTGGTGGAGATGCGGGTG | + |
Preference number: 6 (lower is better) Translates to: AGAAGASVVLVV*VVLVVLVEMRV Trigger: CACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 72 bp | TCCAGCGCGCGCTCCAAACCACGGTTCAAGGGCAGGTaGAAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGG | + |
Preference number: 6 (lower is better) Translates to: SSARSKPRFKGR*KPVPPVPPWCW Trigger: CCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCTGCCCTTGAACCGTGGTTTGGAGCGCGCGCTGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 90 bp | CAGGTTGAAGCCGGTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTaGGTGGTGTTGGTGGTGCTGGTGGAGATGCGGGTGCAGGGCGGT | + |
Preference number: 6 (lower is better) Translates to: QVEAGAAGASVVLVV*VVLVVLVEMRVQGG Trigger: ACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCACCGGCTTCAACCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | GTGCCGCCGGTGCCTCCGTGGTGCTGGTGGTGTTGGTaGTGTTGGTGGTGCTGGTGGAGATGCGGGTGCAGG | + |
Preference number: 6 (lower is better) Translates to: VPPVPPWCWWCW*CWWCWWRCGCR Trigger: CCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGGCGGCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | CCGGTGCCTCCGTGGTGCTGGTGGTGTTGGTGGTGTTaGTGGTGCTGGTGGAGATGCGGGTGCAGGGCGGTT | + |
Preference number: 6 (lower is better) Translates to: PVPPWCWWCWWC*WCWWRCGCRAV Trigger: AACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCACCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | CTGGCGACAGATCTCGGACGGACGTGGTTGGCCAGGTaGCAGAGGACGACACCATCCATGAGTGCCGCCCCC | + |
Preference number: 6 (lower is better) Translates to: LATDLGRTWLAR*QRTTPSMSAAP Trigger: GGGGGCGGCACTCATGGATGGTGTCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATCTGTCGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS CAA 90 bp | GGTGAGGGGACATGGATGCTGGCGACAGATCTCGGACGGACGTGGTaGGCCAGGTGGCAGAGGACGACACCATCCATGAGTGCCGCCCCC | + |
Preference number: 6 (lower is better) Translates to: GEGTWMLATDLGRTW*ARWQRTTPSMSAAP Trigger: GGGGGCGGCACTCATGGATGGTGTCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATCTGTCGCCAGCATCCATGTCCCCTCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS GCA 72 bp | CCTCCGTGGTGCTGGTGGTGTTGGTGGTGTTGGTGGTaGTGGTGGAGATGCGGGTGCAGGGCGGTTACCGAG | + |
Preference number: 6 (lower is better) Translates to: PPWCWWCWWCWW*WWRCGCRAVTE Trigger: CTCGGTAACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | GTGCCTCCGTGGTGCTGGTGGTGTTGGTGGTGTTGGTaGTGCTGGTGGAGATGCGGGTGCAGGGCGGTTACC | + |
Preference number: 6 (lower is better) Translates to: VPPWCWWCWWCW*CWWRCGCRAVT Trigger: GGTAACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGGAGGCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 72 bp | ACTGGGGTCGTCTTGGGGAGGACTCTGCCTGCAGGCTaGCCTGTACCTCCTCAGGGCACCAGGAACCTGAAC | + |
Preference number: 6 (lower is better) Translates to: TGVVLGRTLPAG*PVPPQGTRNLN Trigger: GTTCAGGTTCCTGGTGCCCTGAGGAGGTACAGGGCAGCCTGCAGGCAGAGTCCTCCCCAAGACGACCCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS GCA 72 bp | CCTGGAAAGCAACTGGGGTCGTCTTGGGGAGGACTCTaGCTGCAGGCTGCCCTGTACCTCCTCAGGGCACCA | + |
Preference number: 6 (lower is better) Translates to: PGKQLGSSWGGL*LQAALYLLRAP Trigger: TGGTGCCCTGAGGAGGTACAGGGCAGCCTGCAGGCAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS CCA 72 bp | TGGTGCTGGTGGTGTTGGTGGTGTTGGTGGTGCTGGTaGAGATGCGGGTGCAGGGCGGTTACCGAGAGAGCG | + |
Preference number: 6 (lower is better) Translates to: WCWWCWWCWWCW*RCGCRAVTERA Trigger: CGCTCTCTCGGTAACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | CCGTGGTGCTGGTGGTGTTGGTGGTGTTGGTGGTGCTaGTGGAGATGCGGGTGCAGGGCGGTTACCGAGAGA | + |
Preference number: 6 (lower is better) Translates to: PWCWWCWWCWWC*WRCGCRAVTER Trigger: TCTCTCGGTAACCGCCCTGCACCCGCATCTCCACCAGCACCACCAACACCACCAACACCACCAGCACCACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 72 bp | GAAAGCAACTGGGGTCGTCTTGGGGAGGACTCTGCCTaGAGGCTGCCCTGTACCTCCTCAGGGCACCAGGAA | + |
Preference number: 6 (lower is better) Translates to: ESNWGRLGEDSA*RLPCTSSGHQE Trigger: TTCCTGGTGCCCTGAGGAGGTACAGGGCAGCCTGCAGGCAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS CCA 72 bp | GGGACATGGATGCTGGCGACAGATCTCGGACGGACGTaGTTGGCCAGGTGGCAGAGGACGACACCATCCATG | + |
Preference number: 6 (lower is better) Translates to: GTWMLATDLGRT*LARWQRTTPSM Trigger: CATGGATGGTGTCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATCTGTCGCCAGCATCCATGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS TCA 72 bp | GAAGCCTATAAGGTCCCTGGAGCGGAGGGCAGAAGTTaGCTGTGGGGGTTTCTCCCCGAGGGCCAGCAGAGT | + |
Preference number: 6 (lower is better) Translates to: EAYKVPGAEGRS*LWGFLPEGQQS Trigger: ACTCTGCTGGCCCTCGGGGAGAAACCCCCACAGTCAACTTCTGCCCTCCGCTCCAGGGACCTTATAGGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS GCA 72 bp | AGTCCCGAGTGTCGAGCATCTGCACGGCCAGCAAGCTaGTCTCTTTCTTGTCCTGAGATGCCGCTGTCCCCC | + |
Preference number: 6 (lower is better) Translates to: SPECRASARPAS*SLSCPEMPLSP Trigger: GGGGGACAGCGGCATCTCAGGACAAGAAAGAGAGCAGCTTGCTGGCCGTGCAGATGCTCGACACTCGGGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 72 bp | GTTGGCCAGGTGGCAGAGGACGACACCATCCATGAGTaGCGCCCCCAGGTCTTCATGAAGGGTCACCTTCAG | + |
Preference number: 6 (lower is better) Translates to: VGQVAEDDTIHE*RPQVFMKGHLQ Trigger: CTGAAGGTGACCCTTCATGAAGACCTGGGGGCGGCACTCATGGATGGTGTCGTCCTCTGCCACCTGGCCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS CAA 90 bp | TCTGCGGTCTTAGAAACACATGCCTGGAAAGCAACTGGGGTCGTCTaGGGGAGGACTCTGCCTGCAGGCTGCCCTGTACCTCCTCAGGGC | + |
Preference number: 6 (lower is better) Translates to: SAVLETHAWKATGVV*GRTLPAGCPVPPQG Trigger: GCCCTGAGGAGGTACAGGGCAGCCTGCAGGCAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAAGACCGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS TCA 72 bp | CCTGCACTTGGCCATGCTGAGTTTAGGAACAGCCGGTaGGGGGACATGGATGCTGGCGACAGATCTCGGACG | + |
Preference number: 6 (lower is better) Translates to: PALGHAEFRNSR*GDMDAGDRSRT Trigger: CGTCCGAGATCTGTCGCCAGCATCCATGTCCCCTCACCGGCTGTTCCTAAACTCAGCATGGCCAAGTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS CAA 72 bp | ACATGGATGCTGGCGACAGATCTCGGACGGACGTGGTaGGCCAGGTGGCAGAGGACGACACCATCCATGAGT | + |
Preference number: 6 (lower is better) Translates to: TWMLATDLGRTW*ARWQRTTPSMS Trigger: ACTCATGGATGGTGTCGTCCTCTGCCACCTGGCCAACCACGTCCGTCCGAGATCTGTCGCCAGCATCCATGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS GCA 72 bp | GAGAGCACAGGTCGGCCTCGGGAACGCCAAGTTTCCTaGACGCTTCCAAGAAGTTTTCCACGTTCCTCCTGC | + |
Preference number: 6 (lower is better) Translates to: ESTGRPRERQVS*TLPRSFPRSSC Trigger: GCAGGAGGAACGTGGAAAACTTCTTGGAAGCGTGCAGGAAACTTGGCGTTCCCGAGGCCGACCTGTGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226799.2 |
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CDS CCA 72 bp | CTCTGCGGTCTTAGAAACACATGCCTGGAAAGCAACTaGGGTCGTCTTGGGGAGGACTCTGCCTGCAGGCTG | + |
Preference number: 6 (lower is better) Translates to: LCGLRNTCLESN*GRLGEDSACRL Trigger: CAGCCTGCAGGCAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAAGACCGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS CCA 72 bp | TTGAGTTCCCGCAGAGACTTCAGCTGGCCTATCTGCTaGGGCAAGGCCGTGATCTCGTTGCAACTCACATCC | + |
Preference number: 6 (lower is better) Translates to: LSSRRDFSWPIC*GKAVISLQLTS Trigger: GGATGTGAGTTGCAACGAGATCACGGCCTTGCCCCAGCAGATAGGCCAGCTGAAGTCTCTGCGGGAACTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | GGGGTGAGCCGATGGCACGCATCCTCCTTGATGGTCTaGTCTTCTTCCACGATGTTTGACATGGGCGCATTG | + |
Preference number: 6 (lower is better) Translates to: GVSRWHASSLMV*SSSTMFDMGAL Trigger: CAATGCGCCCATGTCAAACATCGTGGAAGAAGACCAGACCATCAAGGAGGATGCGTGCCATCGGCTCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 72 bp | TTAGAAACACATGCCTGGAAAGCAACTGGGGTCGTCTaGGGGAGGACTCTGCCTGCAGGCTGCCCTGTACCT | + |
Preference number: 6 (lower is better) Translates to: LETHAWKATGVV*GRTLPAGCPVP Trigger: AGGTACAGGGCAGCCTGCAGGCAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS GCA 72 bp | ACATTGAGTTCCCGCAGAGACTTCAGCTGGCCTATCTaGTGGGGCAAGGCCGTGATCTCGTTGCAACTCACA | + |
Preference number: 6 (lower is better) Translates to: TLSSRRDFSWPI*WGKAVISLQLT Trigger: TGTGAGTTGCAACGAGATCACGGCCTTGCCCCAGCAGATAGGCCAGCTGAAGTCTCTGCGGGAACTCAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 72 bp | GCAGGCAGAGCTTTTCCTCGGGAACGCCAAGTTTCCTaGACGCTTCCAAGAAGTTTTCCACGTTCCTCCTGC | + |
Preference number: 6 (lower is better) Translates to: AGRAFPRERQVS*TLPRSFPRSSC Trigger: GCAGGAGGAACGTGGAAAACTTCTTGGAAGCGTGCAGGAAACTTGGCGTTCCCGAGGAAAAGCTCTGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 72 bp | GTCTGGTCTTCTTCCACGATGTTTGACATGGGCGCATaGAGGCTAACCGTGTCCTCATCAGAGGGCTCGGTG | + |
Preference number: 6 (lower is better) Translates to: VWSSSTMFDMGA*RLTVSSSEGSV Trigger: CACCGAGCCCTCTGATGAGGACACGGTTAGCCTCAATGCGCCCATGTCAAACATCGTGGAAGAAGACCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 90 bp | GTGTCCTCATCAGAGGGCTCGGTGGCAGATAACCGCTTATCTCCATaGTCACTTCCAACCCCTGAGTCGGAGTCCTTCTTACTGTCTTCC | + |
Preference number: 6 (lower is better) Translates to: VSSSEGSVADNRLSP*SLPTPESESFLLSS Trigger: GGAAGACAGTAAGAAGGACTCCGACTCAGGGGTTGGAAGTGACAATGGAGATAAGCGGTTATCTGCCACCGAGCCCTCTGATGAGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 90 bp | TCCTTGATGGTCTGGTCTTCTTCCACGATGTTTGACATGGGCGCATaGAGGCTAACCGTGTCCTCATCAGAGGGCTCGGTGGCAGATAAC | + |
Preference number: 6 (lower is better) Translates to: SLMVWSSSTMFDMGA*RLTVSSSEGSVADN Trigger: GTTATCTGCCACCGAGCCCTCTGATGAGGACACGGTTAGCCTCAATGCGCCCATGTCAAACATCGTGGAAGAAGACCAGACCATCAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 72 bp | TCAGAGGGCTCGGTGGCAGATAACCGCTTATCTCCATaGTCACTTCCAACCCCTGAGTCGGAGTCCTTCTTA | + |
Preference number: 6 (lower is better) Translates to: SEGSVADNRLSP*SLPTPESESFL Trigger: TAAGAAGGACTCCGACTCAGGGGTTGGAAGTGACAATGGAGATAAGCGGTTATCTGCCACCGAGCCCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CAA 72 bp | CCTTTAGTTGGGGTGAGCCGATGGCACGCATCCTCCTaGATGGTCTGGTCTTCTTCCACGATGTTTGACATG | + |
Preference number: 6 (lower is better) Translates to: PLVGVSRWHASS*MVWSSSTMFDM Trigger: CATGTCAAACATCGTGGAAGAAGACCAGACCATCAAGGAGGATGCGTGCCATCGGCTCACCCCAACTAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 72 bp | ATCCTCCTTGATGGTCTGGTCTTCTTCCACGATGTTTaGCATGGGCGCATTGAGGCTAACCGTGTCCTCATC | + |
Preference number: 6 (lower is better) Translates to: ILLDGLVFFHDV*HGRIEANRVLI Trigger: GATGAGGACACGGTTAGCCTCAATGCGCCCATGTCAAACATCGTGGAAGAAGACCAGACCATCAAGGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 72 bp | CTCTCTATGATATCTGCGCTTAGACCGTTGGGATCCTaGAGCAGCTCTGCCTCTCTCAGCTGCTCAATCATC | + |
Preference number: 6 (lower is better) Translates to: LSMISALRPLGS*SSSASLSCSII Trigger: GATGATTGAGCAGCTGAGAGAGGCAGAGCTGCTTCAGGATCCCAACGGTCTAAGCGCAGATATCATAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | CAAAATGGAAGGCTTCGGCTGAAATTCTCCTTTAGTTaGGGTGAGCCGATGGCACGCATCCTCCTTGATGGT | + |
Preference number: 6 (lower is better) Translates to: QNGRLRLKFSFS*GEPMARILLDG Trigger: ACCATCAAGGAGGATGCGTGCCATCGGCTCACCCCAACTAAAGGAGAATTTCAGCCGAAGCCTTCCATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | ATTCCAAGTTTCTCTGCGGTCTTAGAAACACATGCCTaGAAAGCAACTGGGGTCGTCTTGGGGAGGACTCTG | + |
Preference number: 6 (lower is better) Translates to: IPSFSAVLETHA*KATGVVLGRTL Trigger: CAGAGTCCTCCCCAAGACGACCCCAGTTGCTTTCCAGGCATGTGTTTCTAAGACCGCAGAGAAACTTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS TCA 72 bp | GCCAAACGGAGCTGTGATGTTTGCAGTAGGAGACACTaGAGGGGAGTTCTCTCGTATCTCATTGGGAGAATA | + |
Preference number: 6 (lower is better) Translates to: AKRSCDVCSRRH*RGVLSYLIGRI Trigger: TATTCTCCCAATGAGATACGAGAGAACTCCCCTTCAGTGTCTCCTACTGCAAACATCACAGCTCCGTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS TCA 72 bp | TCTCGTTGCAACTCACATCCAACTCCATTAACTGTTTaGGCTGACCTATCTCTTCAGGCAGTGATCCGAGCT | + |
Preference number: 6 (lower is better) Translates to: SRCNSHPTPLTV*ADLSLQAVIRA Trigger: AGCTCGGATCACTGCCTGAAGAGATAGGTCAGCTCAAACAGTTAATGGAGTTGGATGTGAGTTGCAACGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 72 bp | TTGCAACTCACATCCAACTCCATTAACTGTTTGAGCTaGCCTATCTCTTCAGGCAGTGATCCGAGCTTGTTG | + |
Preference number: 6 (lower is better) Translates to: LQLTSNSINCLS*PISSGSDPSLL Trigger: CAACAAGCTCGGATCACTGCCTGAAGAGATAGGTCAGCTCAAACAGTTAATGGAGTTGGATGTGAGTTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS TCA 72 bp | TCTTTGGATGAATTTAGTAGTTCCTCCATGTGCCAGTaGGCATCCTCTTCTATCCGCAATAGCTCTTCACAG | + |
Preference number: 6 (lower is better) Translates to: SLDEFSSSSMCQ*ASSSIRNSSSQ Trigger: CTGTGAAGAGCTATTGCGGATAGAAGAGGATGCTCACTGGCACATGGAGGAACTACTAAATTCATCCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS GCA 72 bp | ATCGTAAACTGTGGGTCTATAGATTCCAAGTTTCTCTaGGGTCTTAGAAACACATGCCTGGAAAGCAACTGG | + |
Preference number: 6 (lower is better) Translates to: IVNCGSIDSKFL*GLRNTCLESNW Trigger: CCAGTTGCTTTCCAGGCATGTGTTTCTAAGACCGCAGAGAAACTTGGAATCTATAGACCCACAGTTTACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088970.7 |
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CDS TCA 72 bp | TCTGATACAGTTGTGATACAGGTTAAGAATTTCCAGTaGTACAAATTGGCACAGCTCCATTGGCACTTCCAC | + |
Preference number: 6 (lower is better) Translates to: SDTVVIQVKNFQ*YKLAQLHWHFH Trigger: GTGGAAGTGCCAATGGAGCTGTGCCAATTTGTATCACTGGAAATTCTTAACCTGTATCACAACTGTATCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |
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CDS CCA 72 bp | GAAGGGGAGTTCTCTCGTATCTCATTGGGAGAATACTaGCTTCCATTACTCTGTAACATTAGATCATTTTGC | + |
Preference number: 6 (lower is better) Translates to: EGEFSRISLGEY*LPLLCNIRSFC Trigger: GCAAAATGATCTAATGTTACAGAGTAATGGAAGCCAGTATTCTCCCAATGAGATACGAGAGAACTCCCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS CAA 90 bp | ATGTTTGCAGTAGGAGACACTGAAGGGGAGTTCTCTCGTATCTCATaGGGAGAATACTGGCTTCCATTACTCTGTAACATTAGATCATTT | + |
Preference number: 6 (lower is better) Translates to: MFAVGDTEGEFSRIS*GEYWLPLLCNIRSF Trigger: AAATGATCTAATGTTACAGAGTAATGGAAGCCAGTATTCTCCCAATGAGATACGAGAGAACTCCCCTTCAGTGTCTCCTACTGCAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088970.7 ENSMUST00000226799.2 ENSMUST00000228252.2 |
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CDS TCA 72 bp | TTAACAATGGCCTCAGGAATGACTCTGATACAGTTGTaGTACAGGTTAAGAATTTCCAGTGATACAAATTGG | + |
Preference number: 6 (lower is better) Translates to: LTMASGMTLIQL*YRLRISSDTNW Trigger: CCAATTTGTATCACTGGAAATTCTTAACCTGTATCACAACTGTATCAGAGTCATTCCTGAGGCCATTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088970.7 ENSMUST00000228252.2 |