RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LRBA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028080

Ensembl transcript IDs: ENSMUST00000107635.7, ENSMUST00000192145.6, ENSMUST00000194759.6, ENSMUST00000195524.2, ENSMUST00000212390.2

Found 1061 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTaGCCCACCTGGCTCTGGCTTAGCAGGGCACTGGTGGCCTCGGGC +
Preference number: 1 (lower is better)
Translates to: ASDLETGLWASGHGE*PTWLWLSRALVASG
Trigger: GCCCGAGGCCACCAGTGCCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR CCA 90 bp CTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGACAGGACTGTaGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGC +
Preference number: 1 (lower is better)
Translates to: LLTQYLVASDLETGL*ASGHGEWPTWLWLS
Trigger: GCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR TCA 90 bp GGAGGGGAAACAGCGCCTGTCATTTGGACACCCAAGTCTCTAACATaGCTTGCTTTGGTGTTGCTCTCCAGTAGGTCGGAGCAGATATCT +
Preference number: 1 (lower is better)
Translates to: GGETAPVIWTPKSLT*LALVLLSSRSEQIS
Trigger: AGATATCTGCTCCGACCTACTGGAGAGCAACACCAAAGCAAGTCATGTTAGAGACTTGGGTGTCCAAATGACAGGCGCTGTTTCCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR GCA 90 bp CTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTCCACTCTCTaGCATGAGGACGGCAGATCAGGAAAAGCAGTATTTATGATTGAT +
Preference number: 1 (lower is better)
Translates to: LKRLRAQERSHHSTL*HEDGRSGKAVFMID
Trigger: ATCAATCATAAATACTGCTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR TCA 90 bp CACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTaGGTGATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCG +
Preference number: 1 (lower is better)
Translates to: HQFIITHLAPAHQQV*VMKRSNIILTVLHA
Trigger: CGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR GCA 90 bp CATCACATTACATTTGCACCAATTCATCATAACGCACCTCGCTCCTaGTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATTATCCT +
Preference number: 1 (lower is better)
Translates to: HHITFAPIHHNAPRS*SSTSLSDEKIQYYP
Trigger: AGGATAATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR TCA 90 bp TTTATTTCTCACAACACAGTGCTGCTAAGAATCCCACTGTTATTATaGAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCAC +
Preference number: 1 (lower is better)
Translates to: FISHNTVLLRIPLLL*KFPQQSSSITLHLH
Trigger: GTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACAGTGGGATTCTTAGCAGCACTGTGTTGTGAGAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR-3UTR GCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCCAGCAGCCAGTTCCCTaGTTGTGCTGTTCCCACCCC +
Preference number: 2 (lower is better)
Translates to: VASDLETGLWASGHGEWPQQPVP*LCCSHP
Trigger: GGGGTGGGAACAGCACAAGCAGGGAACTGGCTGCTG...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCTAGTGCTGCCCCTCTaGCATGGGACGGAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: HTATVKALACSKVLWASKLVLPL*HGTEAP
Trigger: TGGGGCCTCCGTCCCATGCCAGAGGGGCAGCACTAG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTCCCTGTCCCCCATTTaGACCCATTTCCCTATTGCT +
Preference number: 2 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGSLSPI*THFPIA
Trigger: AGCAATAGGGAAATGGGTTCAAATGGGGGACAGGGA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATAAGTCCTTCCTTGCTTaGGCTGAAACAGGACCACGG +
Preference number: 2 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHKSFLA*AETGPR
Trigger: CCGTGGTCCTGTTTCAGCCCAAGCAAGGAAGGACTT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGAGTGGACATGGGGAGTaGCCCACCTGGCTCTGGCTT +
Preference number: 2 (lower is better)
Translates to: IGVRWVLLTQYLVASDLESGHGE*PTWLWL
Trigger: AAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACT...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCAAGTCCTTCCTTGCTTaGGCTGAAACAGGACCACGG +
Preference number: 2 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLKSFLA*AETGPR
Trigger: CCGTGGTCCTGTTTCAGCCCAAGCAAGGAAGGACTT...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCAGATAAGTGGGAAATaGTTTTTCACATGTAGCAAG +
Preference number: 2 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHQISGK*FFTCSK
Trigger: CTTGCTACATGTGAAAAACCATTTCCCACTTATCTG...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR TCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTCCCTGTCCCCCATTTaGACCCATTTCCCTATTGCT +
Preference number: 2 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLSLSPI*THFPIA
Trigger: AGCAATAGGGAAATGGGTTCAAATGGGGGACAGGGA...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCCCAAGTCTCTAACATaGCTTGCTTTGGTGTTGCTC +
Preference number: 2 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSPKSLT*LALVLL
Trigger: GAGCAACACCAAAGCAAGTCATGTTAGAGACTTGGG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR-3UTR GCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTCTAGGTCTAACACATaGTTGAAGGGGAATAATACA +
Preference number: 2 (lower is better)
Translates to: YLVASDLETGLWASGHGESRSNT*LKGNNT
Trigger: TGTATTATTCCCCTTCAAGCATGTGTTAGACCTAGA...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTAGCTTTGCTGTACAGTaGATCTTAGAGCCGGGTCTG +
Preference number: 2 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSFAVQ*ILEPGL
Trigger: CAGACCCGGCTCTAAGATTCACTGTACAGCAAAGCT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAATCTAGGTCTAACACATaGTTGAAGGGGAATAATACA +
Preference number: 2 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKSRSNT*LKGNNT
Trigger: TGTATTATTCCCCTTCAAGCATGTGTTAGACCTAGA...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR TCA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCACCAGCAACCAGCAAGTaGAAAACAACTGTAATCTAC +
Preference number: 2 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSPATSK*KTTVIY
Trigger: GTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGG...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR-3UTR GCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTAACGCACCTCGCTCCTaGTCATCAACAAGTCTGAGT +
Preference number: 2 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTNAPRS*SSTSLS
Trigger: ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR-3UTR GCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCCCTGACAGTACTTCATaGGCATTCTCAATCACACAT +
Preference number: 2 (lower is better)
Translates to: QQSSSITLHLHQFIITHLPDSTS*AFSITH
Trigger: ATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGG...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR CAA 90 bp ACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCATaGCATTCCAATTTGCATGCAAATGGTTTATCAGGAAAATTCCAT +
Preference number: 2 (lower is better)
Translates to: TNEGELMKYQHSHSS*HSNLHANGLSGKFH
Trigger: ATGGAATTTTCCTGATAAACCATTTGCATGCAAATTGGAATGCAATGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR-3UTR TCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCCAGGAAGAAAGGATTaGTCTCCTCTAACGATGAGA +
Preference number: 2 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTPGRKD*SPLTMR
Trigger: TCTCATCGTTAGAGGAGATCAATCCTTTCTTCCTGG...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR CAA 90 bp TTTAAGTTACATTCAGATGTGATAGCTATTTCTATAGAGTGGTGTTaGAAGTCCTTCCTTGCTTGGGCTGAAACAGGACCACGGTGCATT +
Preference number: 2 (lower is better)
Translates to: FKLHSDVIAISIEWC*KSFLAWAETGPRCI
Trigger: AATGCACCGTGGTCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGCTATCACATCTGAATGTAACTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCGATCCAATATTATCCTaGCAGTACTTCATGCGCATT +
Preference number: 2 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLDPILS*QYFMRI
Trigger: AATGCGCATGAAGTACTGTCAGGATAATATTGGATC...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR-3UTR TCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGCTCATCAACAAGTCTaGGTGATGAAAAGATCCAAT +
Preference number: 2 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLAHQQV*VMKRSN
Trigger: ATTGGATCTTTTCATCACTCAGACTTGTTGATGAGC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR-3UTR CCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGCTATTTCTATAGAGTaGTGTTTGAAGTCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: SHVARISGIIGSTVCIHNAISIE*CLKSFL
Trigger: AAGGAAGGACTTCAAACACCACTCTATAGAAATAGC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR CAA 90 bp GTACAGAATAAATTTCCCTGTCCCCCATTTGAACCCATTTCCCTATaGCTAAAATCATATTTCTTAAGATTACAGATAAGTGGGAAATGG +
Preference number: 2 (lower is better)
Translates to: VQNKFPCPPFEPISL*LKSYFLRLQISGKW
Trigger: CCATTTCCCACTTATCTGTAATCTTAAGAAATATGATTTTAGCAATAGGGAAATGGGTTCAAATGGGGGACAGGGAAATTTATTCTGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGCTATTTCTATAGAGTaGTGTTTGAAGTCCTTCCTT +
Preference number: 2 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTAISIE*CLKSFL
Trigger: AAGGAAGGACTTCAAACACCACTCTATAGAAATAGC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR GCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACACATTGCATTCCAATTTaGATGCAAATGGTTTATCAG +
Preference number: 2 (lower is better)
Translates to: SNIILTVLHAHSQSHIITHCIPI*MQMVYQ
Trigger: CTGATAAACCATTTGCATGCAAATTGGAATGCAATG...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR CCA 72 bp GGACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTaGCTCTGGCTTAGCAGGGCACTGGTGGCCTCGGGC +
Preference number: 3 (lower is better)
Translates to: GLWASGHGEWPT*LWLSRALVASG
Trigger: GCCCGAGGCCACCAGTGCCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR CCA 72 bp CAGTACCTGGTCGCCTCTGATCTTGAGACAGGACTGTaGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTC +
Preference number: 3 (lower is better)
Translates to: QYLVASDLETGL*ASGHGEWPTWL
Trigger: GAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTTCCCTGTCCCCCATTaGAACCCATTTCCCTATTGC +
Preference number: 3 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGFPVPH*NPFPYC
Trigger: GCAATAGGGAAATGGGTTCAAATGGGGGACAGGGAA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR GCA 72 bp TTGCGAGCCCAAGAGCGGTCCCATCATTCCACTCTCTaGCATGAGGACGGCAGATCAGGAAAAGCAGTATTT +
Preference number: 3 (lower is better)
Translates to: LRAQERSHHSTL*HEDGRSGKAVF
Trigger: AAATACTGCTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTGGGCTCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR TCA 72 bp ACAGCGCCTGTCATTTGGACACCCAAGTCTCTAACATaGCTTGCTTTGGTGTTGCTCTCCAGTAGGTCGGAG +
Preference number: 3 (lower is better)
Translates to: TAPVIWTPKSLT*LALVLLSSRSE
Trigger: CTCCGACCTACTGGAGAGCAACACCAAAGCAAGTCATGTTAGAGACTTGGGTGTCCAAATGACAGGCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR TCA 72 bp AGCCCAAGAGCGGTCCCATCATTCCACTCTCTGCCATaGGGACGGCAGATCAGGAAAAGCAGTATTTATGAT +
Preference number: 3 (lower is better)
Translates to: SPRAVPSFHSLP*GRQIRKSSIYD
Trigger: ATCATAAATACTGCTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCGAATTAGTGGGATTATaGGTTCCACTGTCTGTATCC +
Preference number: 3 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLELVGL*VPLSVS
Trigger: GGATACAGACAGTGGAACCAATAATCCCACTAATTC...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR-3UTR CAA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCATaGCATTCCAATTTGCATGCA +
Preference number: 3 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQHSHSS*HSNLHA
Trigger: TGCATGCAAATTGGAATGCAATGAGCTGTGGCTATG...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR TCA 72 bp TTGGAAACTGCTCTGCGATTGCACATTAATCCCCTCTaGCTGAACAGAGCCCAGGAAGAAAGGATTGATCTC +
Preference number: 3 (lower is better)
Translates to: LETALRLHINPL*LNRAQEERIDL
Trigger: GAGATCAATCCTTTCTTCCTGGGCTCTGTTCAGTCAGAGGGGATTAATGTGCAATCGCAGAGCAGTTTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR TCA 72 bp CCACCACACTTGGCTCTTCCATTTCCATTTAGAAAATaGCAGGGACATCCTAGCTTATCCCCAAAGAGCACC +
Preference number: 3 (lower is better)
Translates to: PPHLALPFPFRK*QGHPSLSPKST
Trigger: GGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTCTAAATGGAAATGGAAGAGCCAAGTGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR TCA 72 bp AGAATACACAGCGACTCCGTGCTGCCGTTTCCAATGTaGAGAGAAAGCAGTTTTAGGCAGAATCTAGTTCAG +
Preference number: 3 (lower is better)
Translates to: RIHSDSVLPFPM*RESSFRQNLVQ
Trigger: CTGAACTAGATTCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGTGTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR TCA 72 bp CTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTaGACTCATGGAGATCCATCTGCCTATGCTTCCCAT +
Preference number: 3 (lower is better)
Translates to: LSWNSLYRPSWL*THGDPSAYASH
Trigger: ATGGGAAGCATAGGCAGATGGATCTCCATGAGTTCAAAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR GCA 72 bp AGAGAAAGCAGTTTTAGGCAGAATCTAGTTCAGCTTTaGTGTACAGTGAATCTTAGAGCCGGGTCTGCTGTT +
Preference number: 3 (lower is better)
Translates to: RESSFRQNLVQL*CTVNLRAGSAV
Trigger: AACAGCAGACCCGGCTCTAAGATTCACTGTACAGCAAAGCTGAACTAGATTCTGCCTAAAACTGCTTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
3UTR GCA 72 bp ACATTTGCACCAATTCATCATAACGCACCTCGCTCCTaGTCATCAACAAGTCTGAGTGATGAAAAGATCCAA +
Preference number: 3 (lower is better)
Translates to: TFAPIHHNAPRS*SSTSLSDEKIQ
Trigger: TTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
3UTR TCA 72 bp ATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTaGGTGATGAAAAGATCCAATATTATCCTGACAGTA +
Preference number: 3 (lower is better)
Translates to: IITHLAPAHQQV*VMKRSNIILTV
Trigger: TACTGTCAGGATAATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGCCCGCGGGTTGTACGTaGAGGCAATGGCACTGGACA +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGPAGCT*RQWHWT
Trigger: TGTCCAGTGCCATTGCCTTCACGTACAACCCGCGGG...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTTCCTCACCAAGGCCTaGGTCCCTCCTGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGFLTKA*VPPASA
Trigger: TGCACTCGCAGGAGGGACTCAGGCCTTGGTGAGGAA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCCTCGGCGAACCTCCATaGTCTCTGGGCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFLGEPP*SLGTGE
Trigger: CTCCCCAGTGCCCAGAGAGCATGGAGGTTCGCCGAG...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTTGAGGTCAGACACCTaGCGCACTATCACCACCCCG +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGLRSDT*RTITTP
Trigger: CGGGGTGGTGATAGTGCGGCAGGTGTCTGACCTCAA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTTCCTCACCAAGGCCTaGGTCCCTCCTGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFFLTKA*VPPASA
Trigger: TGCACTCGCAGGAGGGACTCAGGCCTTGGTGAGGAA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTGTACAGCACCTTGGTaGGCAGGAAGGTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGCTAPW*AGRLCH
Trigger: GTGGCACAACCTTCCTGCTCACCAAGGTGCTGTACA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCTCGCTGATGGCATCTaGCCCCGCGCTGACACCCAG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKLADGI*PRADTQ
Trigger: CTGGGTGTCAGCGCGGGGCCAGATGCCATCAGCGAG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGAACCTCGGGGAGGGTaGGGCTCTATGAGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFEPRGG*GSMSSC
Trigger: GCAACTGCTCATAGAGCCCCACCCTCCCCGAGGTTC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGCCAAAACTTCGGATCTaGGCTTCCACAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGPKLRI*ASTASL
Trigger: GAGAGAGGCTGTGGAAGCTCAGATCCGAAGTTTTGG...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGAGGGTGGGGCTCTATaGGCAGTTGCGAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGEGGAL*AVAKAS
Trigger: AGACGCCTTCGCAACTGCTCATAGAGCCCCACCCTC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGAGCGAGCTAGGCAAGTaGCAACATCCCAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGSELGK*QHPNGQ
Trigger: TTGGCCATTGGGATGTTGTCACTTGCCTAGCTCGCT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGCGTAGTCATGGCCTGTaGGAATGGCCCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGERSHGL*EWPEGW
Trigger: CCACCCCTCGGGCCATTCTCACAGGCCATGACTACG...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCCGTTGTCTCCTCCTGTaGGCAGGTACTGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPRCLLL*AGTAHL
Trigger: GAGATGGGCAGTACCTGCTCACAGGAGGAGACAACG...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCAGGCAAAGAGCTGCTTaGGGTCAGACACCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPRQRAA*GQTPAA
Trigger: TGCGGCAGGTGTCTGACCTCAAGCAGCTCTTTGCCT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCCCGTCATCACCTGTTaGTGGCCGGGAAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHPVITC*WPGRGT
Trigger: CGTGCCCCTTCCCGGCCACCAACAGGTGATGACGGG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTGGAGGGGTTGTCCTTaGGAGACGACTCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPWRGCP*ETTPGT
Trigger: TGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGAATTCTGCCACTCCTaGGAACACAGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGEFCHS*EHSSMT
Trigger: GGTCATGCTGCTGTGTTCCCAGGAGTGGCAGAATTC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGGCTCGCACTGCCTCTaGTCCTTGTTGTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGGSHCL*SLLFIA
Trigger: GGCTATAAACAACAAGGACCAGAGGCAGTGCGAGCC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGATTGCCAGGCCTGGCTaGGTGTTGGCCGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKIARPG*VLAATW
Trigger: CCACGTTGCGGCCAACACCCAGCCAGGCCTGGCAAT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGATTGCCAGGCCTGGCTaGGTGTTGGCCGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEIARPG*VLAATW
Trigger: CCACGTTGCGGCCAACACCCAGCCAGGCCTGGCAAT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTGCACTTGGATGCTCTaGTCCAGGAGGTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGCTWML*SRRSVT
Trigger: GGTAACAGACCTCCTGGACCAGAGCATCCAAGTGCA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGAGACACGGCCCTTCTTaGGAACCACTTAACACCAGG +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGRHGPS*EPLNTR
Trigger: CCTGGTGTTAAGTGGTTCCCAAGAAGGGCCGTGTCT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTCCAGCATCACAGCCTaGGTAGGCAAAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGSSITA*VGKELL
Trigger: AAGCAGCTCTTTGCCTACCCAGGCTGTGATGCTGGA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTCAGATGTGTCGCGCTaGCTGTTTCGCCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSDVSR*LFRHAL
Trigger: CAGAGCATGGCGAAACAGTCAGCGCGACACATCTGA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTCAGATGTGTCGCGCTaGCTGTTTCGCCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPSDVSR*LFRHAL
Trigger: CAGAGCATGGCGAAACAGTCAGCGCGACACATCTGA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGAGGGTGGGGCTCTATaGGCAGTTGCGAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEEGGAL*AVAKAS
Trigger: AGACGCCTTCGCAACTGCTCATAGAGCCCCACCCTC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTCCCAGTGCCTTGAGTaGCTGCACTCGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSQCLE*LHSDSF
Trigger: GAAGGAATCCGAGTGCAGGCACTCAAGGCACTGGGA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCAGTCCCTCCTGCGAGTaGATGAGGTGCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSPSCE*MRCLPM
Trigger: CATTGGAAGGCACCTCATGCACTCGCAGGAGGGACT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTGGAGGGGTTGTCCTTaGGAGACGACTCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGWRGCP*ETTPGT
Trigger: TGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCA...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGAGTCCCTCCTTTGTTaGTCTACTGCATCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGESLLC*STASGA
Trigger: AGCACCAGATGCAGTAGACCAACAAAGGAGGGACTC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGGCCACAAGCTGAGCTaGGGTGCTCAGGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEGHKLS*GAQANR
Trigger: CCTGTTAGCCTGAGCACCCCAGCTCAGCTTGTGGCC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGGCCACAAGCTGAGCTaGGGTGCTCAGGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKGHKLS*GAQANR
Trigger: CCTGTTAGCCTGAGCACCCCAGCTCAGCTTGTGGCC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGAACCTCGGGGAGGGTaGGGCTCTATGAGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEEPRGG*GSMSSC
Trigger: GCAACTGCTCATAGAGCCCCACCCTCCCCGAGGTTC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCCACTGGCAGCTGGTATaGCTGGTCTTGTACAGCACC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFHWQLV*LVLYST
Trigger: GGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTG...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTCTTTCCTGGAAAGTTaGAAAAGGCGTCAGGACCGT +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGSFLES*KRRQDR
Trigger: ACGGTCCTGACGCCTTTTTCAACTTTCCAGGAAAGA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGCACCCCACTCGTATTTaGCTGCATGGTAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGHPTRI*LHGKAE
Trigger: TTCTGCTTTACCATGCAGTCAAATACGAGTGGGGTG...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGCCAACTGCTGCAACTaGGGGCAGTTTTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFANCCN*GQFCIR
Trigger: CCTAATGCAAAACTGCCCTCAGTTGCAGCAGTTGGC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGGGAACACAGCAGCATaGCCAGCTCCACAACTGAAC +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGGNTAA*PAPQLN
Trigger: GTTCAGTTGTGGAGCTGGTCATGCTGCTGTGTTCCC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCGGTAATAGAACACATTaGGGGCTCGCACTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPGNRTH*GLALPL
Trigger: CAGAGGCAGTGCGAGCCCTCAATGTGTTCTATTACC...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATGAGGGTGGGGCTCTATaGGCAGTTGCGAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHEGGAL*AVAKAS
Trigger: AGACGCCTTCGCAACTGCTCATAGAGCCCCACCCTC...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGCTGGGCTTGGTCTGTaGACATCAATGGACTCGCCT +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHAGLGL*TSMDSP
Trigger: AGGCGAGTCCATTGATGTTCACAGACCAAGCCCAGC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGCGTTTTCATAGAAGATaGCACAGTGACCCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGRFHRR*HSDPLS
Trigger: CGAGAGAGGGTCACTGTGTCATCTTCTATGAAAACG...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCTCCCCCAGGCTCCATaGTTGTCTGTGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKLPQAP*LSVRRL
Trigger: CAACCTCCTCACAGACAAGCATGGAGCCTGGGGGAG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGATGACAGCAGGCATTaGCAGGCCTGGCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEDDSRH*QAWLGV
Trigger: AACACCCAGCCAGGCCTGGCAATGCCTGCTGTCATC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTGCAGCGCTCTTTCCTaGAAAGTTGAAAAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGCSALS*KVEKGV
Trigger: GACGCCTTTTTCAACTTTCCAGGAAAGAGCGCTGCA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCAACCTCCATGCTCTCTaGGCACTGGGGAGAATTTCG +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPNLHAL*ALGRIS
Trigger: CGAAATTCTCCCCAGTGCCCAGAGAGCATGGAGGTT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGACAAACCCTCACCTTaGAGCTCTGTGGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGDKPSP*SSVGRP
Trigger: TGGTCTGCCCACAGAGCTCCAAGGTGAGGGTTTGTC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGAATTCTGCCACTCCTaGGAACACAGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFEFCHS*EHSSMT
Trigger: GGTCATGCTGCTGTGTTCCCAGGAGTGGCAGAATTC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTGTTTCGCCATGCTCTaGAGACTGAGGAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFCFAML*RLRRTS
Trigger: GGACGTTCTCCTCAGTCTCCAGAGCATGGCGAAACA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTGTTTCGCCATGCTCTaGAGACTGAGGAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPCFAML*RLRRTS
Trigger: GGACGTTCTCCTCAGTCTCCAGAGCATGGCGAAACA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCGTGTTGGCCGCAACGTaGGTGACTGGAGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPVLAAT*VTGEFE
Trigger: TTCGAATTCTCCAGTCACCCACGTTGCGGCCAACAC...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCACTGGCAGCTGGTATaGCTGGTCTTGTACAGCACC +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHHWQLV*LVLYST
Trigger: GGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTG...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCAGACACGGCCCTTCTTaGGAACCACTTAACACCAGG +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPRHGPS*EPLNTR
Trigger: CCTGGTGTTAAGTGGTTCCCAAGAAGGGCCGTGTCT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCATCCGTCTCCACGGTaGCCTGCAGCTTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHHPSPR*PAASRS
Trigger: TGAACGGGAAGCTGCAGGCCACCGTGGAGACGGATG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTCCAGCATCACAGCCTaGGTAGGCAAAGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPSSITA*VGKELL
Trigger: AAGCAGCTCTTTGCCTACCCAGGCTGTGATGCTGGA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTTCTGGAACCAGGCTTaGAGAACACGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFFWNQA*RTRSCF
Trigger: GAAACAGGACCGTGTTCTTCAAGCCTGGTTCCAGAA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGGGCTGGATCCACTGTaGCTCCATCTGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEGLDPL*LHLLAY
Trigger: ATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGGGCTGGATCCACTGTaGCTCCATCTGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKGLDPL*LHLLAY
Trigger: ATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTTCTCATCCACGGATaGCAGAGTATCGTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGFLIHG*QSIVVA
Trigger: GGCGACGACGATACTCTGTCATCCGTGGATGAGAAA...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCCTGTGCTGCCACCGCTaGGTCATATTTGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPLCCHR*VIFEAL
Trigger: CAAAGCTTCAAATATGACTCAGCGGTGGCAGCACAG...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGCTGTGCCGCAGGCTATaGGAGGATCGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGELCRRL*EDRFPL
Trigger: CAGTGGAAATCGATCCTCTCATAGCCTGCGGCACAG...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCGTAGTCATGGCCTGTaGGAATGGCCCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLERSHGL*EWPEGW
Trigger: CCACCCCTCGGGCCATTCTCACAGGCCATGACTACG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGCAAGCATCTGCTCCTaGATAGCAATTGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGASICS*IAIEFF
Trigger: GAAGAACTCAATTGCTATGCAGGAGCAGATGCTTGC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCTCGGCGAACCTCCATaGTCTCTGGGCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLELGEPP*SLGTGE
Trigger: CTCCCCAGTGCCCAGAGAGCATGGAGGTTCGCCGAG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTGGTGCTGTTCCTTGTaGTGTCTGCTCCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGWCCSL*CLLLLP
Trigger: AGGCAACAGGAGCAGACAGCACAAGGAACAGCACCA...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGTCTACTGGGCTCTTTaGTGCAGATTTCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHVYWAL*CRFPHG
Trigger: CCCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGAC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGCTCTGCAAAGAATGCTaGTCGTTTGGGATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGLCKEC*SFGIQS
Trigger: GCTTTGAATCCCAAACGAGCAGCATTCTTTGCAGAG...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCATTGAGGGCTCGCACTaGCTCTGGTCCTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFIEGSH*LWSLLF
Trigger: AAACAACAAGGACCAGAGGCAGTGCGAGCCCTCAAT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGGCTCTATGAGCAGTTaGGAAGGCGTCTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFGSMSS*EGVCPK
Trigger: TTTTGGACAGACGCCTTCGCAACTGCTCATAGAGCC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAGGAGGTCTGTTACCTaGCTCCTGTGTGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKRRSVT*LLCVPV
Trigger: CACAGGGACACACAGGAGGCAGGTAACAGACCTCCT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGAGGAGGTCTGTTACCTaGCTCCTGTGTGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGERRSVT*LLCVPV
Trigger: CACAGGGACACACAGGAGGCAGGTAACAGACCTCCT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGGTACTGCCCATCTCTaGTCAGCTGTATGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHGTAHL*SAVWPL
Trigger: TAAGGGCCATACAGCTGAGCAGAGATGGGCAGTACC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCCACAACTGAACTGCTaGACTTCATGCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGPQLNC*TSCRPG
Trigger: GCCTGGTCTGCATGAAGTCCAGCAGTTCAGTTGTGG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGGCTCGCACTGCCTCTaGTCCTTGTTGTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHGSHCL*SLLFIA
Trigger: GGCTATAAACAACAAGGACCAGAGGCAGTGCGAGCC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGGCTCGCACTGCCTCTaGTCCTTGTTGTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGGSHCL*SLLFIA
Trigger: GGCTATAAACAACAAGGACCAGAGGCAGTGCGAGCC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGACATCTTGCTGGGCTTaGTCTGTGAACATCAATGGA +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGTSCWA*SVNING
Trigger: TCCATTGATGTTCACAGACCAAGCCCAGCAAGATGT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGTGTTGGCCGCAACGTaGGTGACTGGAGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHVLAAT*VTGEFE
Trigger: TTCGAATTCTCCAGTCACCCACGTTGCGGCCAACAC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAATTGCCAGGCCTGGCTaGGTGTTGGCCGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKIARPG*VLAATW
Trigger: CCACGTTGCGGCCAACACCCAGCCAGGCCTGGCAAT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR CAA 72 bp GGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTaGAGACAGGACTGTGGGCCAGTGGACATGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GCCLHSTWSPLI*RQDCGPVDMGS
Trigger: ACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTCAGGACCGTACTTCTaGGGCATGTGCTTTAACACT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSGPYF*GMCFNT
Trigger: AGTGTTAAAGCACATGCCTCAGAAGTACGGTCCTGA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTCTTTCCTGGAAAGTTaGAAAAGGCGTCAGGACCGT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSFLES*KRRQDR
Trigger: ACGGTCCTGACGCCTTTTTCAACTTTCCAGGAAAGA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGCCCGCGGGTTGTACGTaGAGGCAATGGCACTGGACA +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMPAGCT*RQWHWT
Trigger: TGTCCAGTGCCATTGCCTTCACGTACAACCCGCGGG...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCAAGTACTGCTCTGCTaGCGTGGGATTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHQVLLC*RGIWKT
Trigger: AGTCTTCCAAATCCCACGTCAGCAGAGCAGTACTTG...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCAAGTACTGCTCTGCTaGCGTGGGATTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGQVLLC*RGIWKT
Trigger: AGTCTTCCAAATCCCACGTCAGCAGAGCAGTACTTG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTGCAGCATCTTCTTCTaGGGGAGAACTTATGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFCSIFF*GRTYGS
Trigger: GCTTCCATAAGTTCTCCCTCAGAAGAAGATGCTGCA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGTTTCCTTAAGAGACTaGCTGTGTCTTTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGVSLRD*LCLSSW
Trigger: CCAAGATGAAAGACACAGTCAGTCTCTTAAGGAAAC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGAGGGGGCCACAAGCTaGGCTGGGGTGCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGREGATS*AGVLRL
Trigger: TAGCCTGAGCACCCCAGCTCAGCTTGTGGCCCCCTC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCTGTGCTGCCACCGCTaGGTCATATTTGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGLCCHR*VIFEAL
Trigger: CAAAGCTTCAAATATGACTCAGCGGTGGCAGCACAG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAGCGAGCTAGGCAAGTaGCAACATCCCAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKSELGK*QHPNGQ
Trigger: TTGGCCATTGGGATGTTGTCACTTGCCTAGCTCGCT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCATTCATGGAGTGTATaGGACACGGCCCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKHSWSV*DTALLG
Trigger: CCCAAGAAGGGCCGTGTCTCATACACTCCATGAATG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGCGGGTCTGGTACTCATaGTGCCAGCGGTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGERVWYS*CQRLKS
Trigger: TGACTTTAACCGCTGGCATCATGAGTACCAGACCCG...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTCCCAGTGCCTTGAGTaGCTGCACTCGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHSQCLE*LHSDSF
Trigger: GAAGGAATCCGAGTGCAGGCACTCAAGGCACTGGGA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCAGCGAGAACAATCCATaGCCAAGCATGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPSENNP*PSMTSA
Trigger: AGCTGAAGTCATGCTTGGGCATGGATTGTTCTCGCT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCAGCGAGAACAATCCATaGCCAAGCATGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSENNP*PSMTSA
Trigger: AGCTGAAGTCATGCTTGGGCATGGATTGTTCTCGCT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGAAAGCATCCATTCTTaGCACACAGAGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHESIHS*HTEHCS
Trigger: GCTGCAGTGCTCTGTGTGGCAAGAATGGATGCTTTC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGTGCTGTTCCTTGTaGTGTCTGCTCCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEWCCSL*CLLLLP
Trigger: AGGCAACAGGAGCAGACAGCACAAGGAACAGCACCA...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCCCTTTGTTGGTCTACTaGATCTGGTGCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPPLLVY*IWCCSL
Trigger: CAAGGAACAGCACCAGATGCAGTAGACCAACAAAGG...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGTCTACTGGGCTCTTTaGTGCAGATTTCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKVYWAL*CRFPHG
Trigger: CCCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGAC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCAAGGATGTCTTCATCTaGAGCATGTTCCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFKDVFI*SMFHGC
Trigger: ACAGCCGTGGAACATGCTGCAGATGAAGACATCCTT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGAACAGCCATTTTCCATaGAGACCTTCTGTATATGCC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGNSHFP*RPSVYA
Trigger: GGCATATACAGAAGGTCTGCATGGAAAATGGCTGTT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCACCATGATGACATCTTaGTGGGCTTGGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFTMMTS*WAWSVN
Trigger: GTTCACAGACCAAGCCCAGCAAGATGTCATCATGGT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCATGATGACATCTTaGTGGGCTTGGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPTMMTS*WAWSVN
Trigger: GTTCACAGACCAAGCCCAGCAAGATGTCATCATGGT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATTATCTCCAATCCCGCTaGTCTTCCCATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHYLQSR*SSHSST
Trigger: GGTACTGGAATGGGAAGAGCAGCGGGATTGGAGATA...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCTCCTATGGAGTGCATaGCGCTCTGGATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKLLWSA*RSGWNV
Trigger: CACATTCCATCCAGAGCGCCATGCACTCCATAGGAG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATGACAAACCCTCACCTTaGAGCTCTGTGGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHDKPSP*SSVGRP
Trigger: TGGTCTGCCCACAGAGCTCCAAGGTGAGGGTTTGTC...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTGCTGTGGCCACAGTTaGAAACCTAGAATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFCCGHS*KPRILR
Trigger: TCTGAGGATTCTAGGTTTCCAACTGTGGCCACAGCA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGACTGTACAGTTGCCTaGGGAACAGGAACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFDCTVA*GTGTSD
Trigger: ATCAGAAGTTCCTGTTCCCCAGGCAACTGTACAGTC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATTCTGAACTGCATGGGTaGGTCAACAGACAGATCTCC +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHSELHG*VNRQIS
Trigger: GGAGATCTGTCTGTTGACCCACCCATGCAGTTCAGA...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTACTGTGGCAGGGTCTaGGAAGTTGAACATTACAGC +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPYCGRV*EVEHYS
Trigger: GCTGTAATGTTCAACTTCCCAGACCCTGCCACAGTA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAGACACGGCCCTTCTTaGGAACCACTTAACACCAGG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKRHGPS*EPLNTR
Trigger: CCTGGTGTTAAGTGGTTCCCAAGAAGGGCCGTGTCT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGTAAAAGGAACAAGGTaGAGCCTACGGCACTCACCC +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKVKGTR*SLRHSP
Trigger: GGGTGAGTGCCGTAGGCTCCACCTTGTTCCTTTTAC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCAGGCTAATTAGCCTCTaGAGAAATGTCACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPRLISL*RNVTEA
Trigger: AGCCTCAGTGACATTTCTTCAGAGGCTAATTAGCCT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCAGGGTCTGGGAAGTTaGACATTACAGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGQGLGS*TLQQLC
Trigger: ACAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCAGGGTCTGGGAAGTTaGACATTACAGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHQGLGS*TLQQLC
Trigger: ACAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTG...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGAAATACGCCTGGTCTaGGGTAATCCAAAACTGGTT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFEIRLV*GNPKLV
Trigger: AACCAGTTTTGGATTACCTCAGACCAGGCGTATTTC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCGAAATACGCCTGGTCTaGGGTAATCCAAAACTGGTT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPEIRLV*GNPKLV
Trigger: AACCAGTTTTGGATTACCTCAGACCAGGCGTATTTC...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCGAAGCTTTGAATAGCTaGCGTGGAGTGGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPEALNS*RGVANE
Trigger: TTCATTAGCCACTCCACGTCAGCTATTCAAAGCTTC...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCACAGGATCAGTTATTaGGTTCAGGTTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGHRISY*VQVDSS
Trigger: GGAGCTGTCAACCTGAACTCAATAACTGATCCTGTG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACGTAGTCATGGCCTGTaGGAATGGCCCGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRRSHGL*EWPEGW
Trigger: CCACCCCTCGGGCCATTCTCACAGGCCATGACTACG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAACGTTGTCTCCTCCTGTaGGCAGGTACTGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKRCLLL*AGTAHL
Trigger: GAGATGGGCAGTACCTGCTCACAGGAGGAGACAACG...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAAGGCAAAGAGCTGCTTaGGGTCAGACACCTGCCGCA +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKRQRAA*GQTPAA
Trigger: TGCGGCAGGTGTCTGACCTCAAGCAGCTCTTTGCCT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCGGGTCTGGTACTCATaGTGCCAGCGGTTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHRVWYS*CQRLKS
Trigger: TGACTTTAACCGCTGGCATCATGAGTACCAGACCCG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGGCAAAAATCTGAGCTaGATTAAGAGCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGGKNLS*IKSITE
Trigger: TTCAGTGATGCTCTTAATGCAGCTCAGATTTTTGCC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTCCTTCGCTCTTCGATaGCAGAAGTTTATAGATAAC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGSFALR*QKFIDN
Trigger: GTTATCTATAAACTTCTGGCATCGAAGAGCGAAGGA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCATGTCAGAAAGAAATaGTCGGCGAACCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGHVRKK*SANLHA
Trigger: AGCATGGAGGTTCGCCGAGCATTTCTTTCTGACATG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGAAAGCATCCATTCTTaGCACACAGAGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKESIHS*HTEHCS
Trigger: GCTGCAGTGCTCTGTGTGGCAAGAATGGATGCTTTC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCAATAGTCACTGGCTCTaGTGCATCAGAAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPNSHWL*CIRRRF
Trigger: GAAACGTCTTCTGATGCAGCAGAGCCAGTGACTATT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCAATAGTCACTGGCTCTaGTGCATCAGAAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFNSHWL*CIRRRF
Trigger: GAAACGTCTTCTGATGCAGCAGAGCCAGTGACTATT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGATGACAGCAGGCATTaGCAGGCCTGGCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKDDSRH*QAWLGV
Trigger: AACACCCAGCCAGGCCTGGCAATGCCTGCTGTCATC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGTCATCACCTGTTGGTaGCCGGGAAGGGGCACGATT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKVITCW*PGRGTI
Trigger: AATCGTGCCCCTTCCCGGCCACCAACAGGTGATGAC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGAGTGCATGGCGCTCTaGATGGAATGTGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHECMAL*MECVKT
Trigger: AGTTTTGACACATTCCATCCAGAGCGCCATGCACTC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGAGTGCATGGCGCTCTaGATGGAATGTGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGECMAL*MECVKT
Trigger: AGTTTTGACACATTCCATCCAGAGCGCCATGCACTC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTCTGCAGTTCAGTGTTaGATGCAGAATCTATTGAAC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGSAVQC*MQNLLN
Trigger: GTTCAATAGATTCTGCATCCAACACTGAACTGCAGA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATTGCTGTGGCCACAGTTaGAAACCTAGAATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHCCGHS*KPRILR
Trigger: TCTGAGGATTCTAGGTTTCCAACTGTGGCCACAGCA...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCCATCCAGCATCTCATaGCTGTCTGACTGTACAGTT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGPSSIS*LSDCTV
Trigger: AACTGTACAGTCAGACAGCCATGAGATGCTGGATGG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCCTGCAGATTTCCCCATaGGAATCAGGCTATGTATTG +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFLQISP*ESGYVL
Trigger: CAATACATAGCCTGATTCCCATGGGGAAATCTGCAG...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGTGTGACTCCATCTGCTaGCATATTCACCAAGCTCCG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKCDSIC*HIHQAP
Trigger: CGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACA...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCATAGCTGACGTGGAGTaGCTAATGAAATACGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGIADVE*LMKYAW
Trigger: CCAGGCGTATTTCATTAGCCACTCCACGTCAGCTAT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCACATCTTGCTGGGCTTaGTCTGTGAACATCAATGGA +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPTSCWA*SVNING
Trigger: TCCATTGATGTTCACAGACCAAGCCCAGCAAGATGT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCAGGCATTGCCAGGCCTaGCTGGGTGTTGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLRHCQA*LGVGRN
Trigger: GTTGCGGCCAACACCCAGCCAGGCCTGGCAATGCCT...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATAGGATCGATTTCCACTaGCAGCTGGTATGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHRIDFH*QLVWLV
Trigger: GACCAGCCATACCAGCTGCCAGTGGAAATCGATCCT...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCGAATGGCCCGAGGGGTaGCAGTTTCACCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLEWPEG*QFHRQG
Trigger: ACCCTGGCGGTGAAACTGCCACCCCTCGGGCCATTC...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGAATGGCCCGAGGGGTaGCAGTTTCACCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGREWPEG*QFHRQG
Trigger: ACCCTGGCGGTGAAACTGCCACCCCTCGGGCCATTC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGATTGCTCAAATACTTTaGAAACGCAAGGCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGIAQIL*KRKAKF
Trigger: GAACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAAT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCGGTAAAGCAGAATTCTaGATATGGCGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPGKAEF*IWRTPS
Trigger: AGATGGTGTACGCCATATTCAGAATTCTGCTTTACC...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGTCAAGCCCATGTCGTTaGGGCTGTGGTGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKSSPCR*GCGASV
Trigger: CACAGAAGCACCACAGCCTCAACGACATGGGCTTGA...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTTCTGCATCAGGAAGTaGTGCATTCCCATTATCACT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPFCIRK*CIPIIT
Trigger: AGTGATAATGGGAATGCATCACTTCCTGATGCAGAA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCATTTTCTGGATTAACTaGGTTGCGGTCACATGGTCT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFIFWIN*VAVTWS
Trigger: AGACCATGTGACCGCAACTCAGTTAATCCAGAAAAT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGAAATACGCCTGGTCTaGGGTAATCCAAAACTGGTT +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHEIRLV*GNPKLV
Trigger: AACCAGTTTTGGATTACCTCAGACCAGGCGTATTTC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTCATATTTGAAGCTTTaGATAGCTGACGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSYLKL*IADVEW
Trigger: CCACTCCACGTCAGCTATTCAAAGCTTCAAATATGA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCTGTGCTGCCACCGCTaGGTCATATTTGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHLCCHR*VIFEAL
Trigger: CAAAGCTTCAAATATGACTCAGCGGTGGCAGCACAG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTGGAACTTTGGAACTTaGTCATCTTCCCATGACTCA +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFWNFGT*SSSHDS
Trigger: TGAGTCATGGGAAGATGATCAAGTTCCAAAGTTCCA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGTCAGATGTGTCGCGCTaGCTGTTTCGCCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMSDVSR*LFRHAL
Trigger: CAGAGCATGGCGAAACAGTCAGCGCGACACATCTGA...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCATGCTCCAGACTTCTaGTTGGCAAGTGACATCACA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKHAPDF*LASDIT
Trigger: TGTGATGTCACTTGCCAAGCAGAAGTCTGGAGCATG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGTCAACGAGAAGATCTaGAATCATACTGTCAACTTT +
Preference number: 4 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGVNEKI*NHTVNF
Trigger: AAAGTTGACAGTATGATTGCAGATCTTCTCGTTGAC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGACATATCATGTGTCTaGAGTTCAGTGTTGGATGCA +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFDISCV*SSVLDA
Trigger: TGCATCCAACACTGAACTGCAGACACATGATATGTC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGTTCCTTGTGCTGTCTaGTCCTGTTGCCTTGATATC +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKVPCAV*SCCLDI
Trigger: GATATCAAGGCAACAGGAGCAGACAGCACAAGGAAC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGTCTGTGAATATCCTCTaGTCTCTGCCTGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKSVNIL*SLPAQD
Trigger: ATCCTGAGCAGGCAGAGAGCAGAGGATATTCACAGA...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAACGAGGACGACTTACTaGAGAGCTCCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRTRTTY*RAPPGS
Trigger: GGAGCCTGGGGGAGCTCTGCAGTAAGTCGTCCTCGT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTACAGCAACTCTGTTTaGCATAAAGATCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFYSNSV*HKDLQS
Trigger: GCTCTGGAGATCTTTATGGCAAACAGAGTTGCTGTA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGAGGAGGTCTGTTACCTaGCTCCTGTGTGTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKRRSVT*LLCVPV
Trigger: CACAGGGACACACAGGAGGCAGGTAACAGACCTCCT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATATGCTCTCTGGGCACTaGGGAGAATTTCGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHMLSGH*GEFRSR
Trigger: CCTACTTCGAAATTCTCCCCAGTGCCCAGAGAGCAT...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCATGACCACACATATCTaGTTCTTCTCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPMTTHI*FFSAFR
Trigger: TCTGAAGGCAGAGAAGAACCAGATATGTGTGGTCAT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTCTTCTGCTCAGAAGTaGCAGGAGCCTCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHSSAQK*QEPQRH
Trigger: ATGTCTCTGAGGCTCCTGCCACTTCTGAGCAGAAGA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGAGGTAATCCAAAACTaGTTCCCACACCAACACGAG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEEVIQN*FPHQHE
Trigger: CTCGTGTTGGTGTGGGAACCAGTTTTGGATTACCTC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGATAGCTGACGTGGAGTaGCTAATGAAATACGCCTGG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEIADVE*LMKYAW
Trigger: CCAGGCGTATTTCATTAGCCACTCCACGTCAGCTAT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGAGGCATTGCCAGGCCTaGCTGGGTGTTGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQRHCQA*LGVGRN
Trigger: GTTGCGGCCAACACCCAGCCAGGCCTGGCAATGCCT...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGGGCAGCTGGTATGGCTaGTCTTGTACAGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEGSWYG*SCTAPW
Trigger: CCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCC...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGATTTCCACTGGCAGCTaGTATGGCTGGTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKISTGS*YGWSCT
Trigger: TGTACAAGACCAGCCATACCAGCTGCCAGTGGAAAT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCATTTTCCTGTATCTGTaGAGTAGACCCGGAAACTCT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPIFLYL*SRPGNS
Trigger: AGAGTTTCCGGGTCTACTCCACAGATACAGGAAAAT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGTGACAACATCCCAATaGCCAAACACCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEVTTSQ*PNTTWI
Trigger: GATCCAAGTGGTGTTTGGCCATTGGGATGTTGTCAC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCCCTCTCTCGATGCTTaGATGAGTTTTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKPSLDA*MSFGFR
Trigger: CCTGAAACCAAAACTCATCCAAGCATCGAGAGAGGG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACATCCGTCTCCACGGTaGCCTGCAGCTTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRHPSPR*PAASRS
Trigger: TGAACGGGAAGCTGCAGGCCACCGTGGAGACGGATG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGATCCGCTGTCTCCGATaGTCCCAGGAAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEIRCLR*SQEAFV
Trigger: GACAAATGCTTCCTGGGATCATCGGAGACAGCGGAT...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCAAACCTCTCAGTATCTaGAGCCACACTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGKPLSI*SHTRNI
Trigger: GATGTTTCTAGTGTGGCTTCAGATACTGAGAGGTTT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTCAAGCCCATGTCGTTaGGGCTGTGGTGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSSSPCR*GCGASV
Trigger: CACAGAAGCACCACAGCCTCAACGACATGGGCTTGA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGCCAAAGCCAAGAATTaGGCTTGCTTGCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKAKAKN*ACLLSS
Trigger: CGAGGACAGCAAGCAAGCTCAATTCTTGGCTTTGGC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGGCCAAAGCCAAGAATTaGGCTTGCTTGCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMAKAKN*ACLLSS
Trigger: CGAGGACAGCAAGCAAGCTCAATTCTTGGCTTTGGC...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGAGCAGTTCTTGTCCATaGCTACCTAAAAGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGESSSCP*LPKSVR
Trigger: TCGGACACTTTTAGGTAGTCATGGACAAGAACTGCT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGTATTGAGCACACAATaGCTCAAATTCTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFVLSTQ*LKFCMS
Trigger: AGACATGCAGAATTTGAGTCATTGTGTGCTCAATAC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATATTTTCTGGATTAACTaGGTTGCGGTCACATGGTCT +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHIFWIN*VAVTWS
Trigger: AGACCATGTGACCGCAACTCAGTTAATCCAGAAAAT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAGAGGGGGCCACAAGCTaGGCTGGGGTGCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGEGATS*AGVLRL
Trigger: TAGCCTGAGCACCCCAGCTCAGCTTGTGGCCCCCTC...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCGAGGGGGCCACAAGCTaGGCTGGGGTGCTCAGGCTA +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLEGATS*AGVLRL
Trigger: TAGCCTGAGCACCCCAGCTCAGCTTGTGGCCCCCTC...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTTGGGTCAATTTTCTTaGAGTTGGGATCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFLGQFS*SWDPLH
Trigger: ATGAAGAGGATCCCAACTTCAAGAAAATTGACCCAA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATACGGCGAGAAAAGATTaGTCTTATCTCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHTARKD*SYLCEQ
Trigger: CTGTTCACAGAGATAAGATCAATCTTTTCTCGCCGT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCACGGCGAGAAAAGATTaGTCTTATCTCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGTARKD*SYLCEQ
Trigger: CTGTTCACAGAGATAAGATCAATCTTTTCTCGCCGT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATTCATATTTGAAGCTTTaGATAGCTGACGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHSYLKL*IADVEW
Trigger: CCACTCCACGTCAGCTATTCAAAGCTTCAAATATGA...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCAAGTACTCGAAGTTTaGAATCTCTCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKQVLEV*NLSVLP
Trigger: TGGCAGCACAGAGAGATTTCAAACTTCGAGTACTTG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGGTAATAGAACACATTaGGGGCTCGCACTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKGNRTH*GLALPL
Trigger: CAGAGGCAGTGCGAGCCCTCAATGTGTTCTATTACC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTTATTGAGTTCAGGTTaGCAGCTCCTTCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPLLSSG*QLLHRL
Trigger: TAACCTATGAAGGAGCTGTCAACCTGAACTCAATAA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGCTGGGCTTGGTCTGTaGACATCAATGGACTCGCCT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSAGLGL*TSMDSP
Trigger: AGGCGAGTCCATTGATGTTCACAGACCAAGCCCAGC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTGTACAGCACCTTGGTaGGCAGGAAGGTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSCTAPW*AGRLCH
Trigger: GTGGCACAACCTTCCTGCTCACCAAGGTGCTGTACA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCTGTGCCGCAGGCTATaGGAGGATCGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSLCRRL*EDRFPL
Trigger: CAGTGGAAATCGATCCTCTCATAGCCTGCGGCACAG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGCATTCATGGAGTGTATaGGACACGGCCCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKHSWSV*DTALLG
Trigger: CCCAAGAAGGGCCGTGTCTCATACACTCCATGAATG...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCGAGGCCTACTTCTGTaGAGACTTGAAGATTTCGTA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKRGLLL*RLEDFV
Trigger: TACGAAATCTTCAAGTCTGCACAGAAGTAGGCCTCG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCATCCTGGAGCATGAGTaGGTGTGGCGAGTGGACGAA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSILEHE*VWRVDE
Trigger: TTCGTCCACTCGCCACACGCACTCATGCTCCAGGAT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGCAAGCATCTGCTCCTaGATAGCAATTGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKASICS*IAIEFF
Trigger: GAAGAACTCAATTGCTATGCAGGAGCAGATGCTTGC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCAGGGGCATCCCATTCTaGAGATTGCTCAAATACTTT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGRGIPF*RLLKYF
Trigger: AAAGTATTTGAGCAATCTGCAGAATGGGATGCCCCT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTCCTTCGCTCTTCGATaGCAGAAGTTTATAGATAAC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFSFALR*QKFIDN
Trigger: GTTATCTATAAACTTCTGGCATCGAAGAGCGAAGGA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTGTTTTCGAGCTCTTTaGTGTATCTCCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGCFRAL*CISSGF
Trigger: AAAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACA...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTCTGTGAATATCCTCTaGTCTCTGCCTGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHSVNIL*SLPAQD
Trigger: ATCCTGAGCAGGCAGAGAGCAGAGGATATTCACAGA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCCTCCCCCAGGCTCCATaGTTGTCTGTGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLLPQAP*LSVRRL
Trigger: CAACCTCCTCACAGACAAGCATGGAGCCTGGGGGAG...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCCAGACCTTCTGTATATaGCAAGATCTTTGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFQTFCI*QDLWVN
Trigger: ATTGACCCAAAGATCTTGGCATATACAGAAGGTCTG...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCAACAGCCATTTTCCATaGAGACCTTCTGTATATGCC +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGNSHFP*RPSVYA
Trigger: GGCATATACAGAAGGTCTGCATGGAAAATGGCTGTT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGATGACAGCAGGCATTaGCAGGCCTGGCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRDDSRH*QAWLGV
Trigger: AACACCCAGCCAGGCCTGGCAATGCCTGCTGTCATC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGGTACTGCCCATCTCTaGTCAGCTGTATGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKGTAHL*SAVWPL
Trigger: TAAGGGCCATACAGCTGAGCAGAGATGGGCAGTACC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTCATCACCTGTTGGTaGCCGGGAAGGGGCACGATT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVITCW*PGRGTI
Trigger: AATCGTGCCCCTTCCCGGCCACCAACAGGTGATGAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGCTTGTACTCCTCCTATaGAGTGCATGGCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKLVLLL*SAWRSG
Trigger: TCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAG...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATCTCGCTGATGGCATCTaGCCCCGCGCTGACACCCAG +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYLADGI*PRADTQ
Trigger: CTGGGTGTCAGCGCGGGGCCAGATGCCATCAGCGAG...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACCGGTGTCTGAGGCGTaGGTGGGATCTACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRPVSEA*VGSTED
Trigger: GTCTTCAGTAGATCCCACCCACGCCTCAGACACCGG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAACTCATGTGTGCAGCTaGGTCTTGTGGGACGGAGCC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRTHVCS*VLWDGA
Trigger: GGCTCCGTCCCACAAGACCCAGCTGCACACATGAGT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGTGTTTCGCCATGCTCTaGAGACTGAGGAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLECFAML*RLRRTS
Trigger: GGACGTTCTCCTCAGTCTCCAGAGCATGGCGAAACA...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGACATCTTGCTGGGCTTaGTCTGTGAACATCAATGGA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKTSCWA*SVNING
Trigger: TCCATTGATGTTCACAGACCAAGCCCAGCAAGATGT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGGCAGCTGGTATGGCTaGTCTTGTACAGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSGSWYG*SCTAPW
Trigger: CCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGTGCACTTGGATGCTCTaGTCCAGGAGGTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKCTWML*SRRSVT
Trigger: GGTAACAGACCTCCTGGACCAGAGCATCCAAGTGCA...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATATTTTCCTGTATCTGTaGAGTAGACCCGGAAACTCT +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHIFLYL*SRPGNS
Trigger: AGAGTTTCCGGGTCTACTCCACAGATACAGGAAAAT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCTGGCCAAACACCACTTaGATCAATTTTCCTGTATCT +
Preference number: 4 (lower is better)
Translates to: VASDLETGLWASGHGEWPWPNTT*INFPVS
Trigger: AGATACAGGAAAATTGATCCAAGTGGTGTTTGGCCA...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTGGCCAAACACCACTTaGATCAATTTTCCTGTATCT +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFWPNTT*INFPVS
Trigger: AGATACAGGAAAATTGATCCAAGTGGTGTTTGGCCA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTGCTTGGATGAGTTTTaGTTTCAGGCAATTTTCGGG +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGCLDEF*FQAIFG
Trigger: CCCGAAAATTGCCTGAAACCAAAACTCATCCAAGCA...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCCCTCTCTCGATGCTTaGATGAGTTTTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHPSLDA*MSFGFR
Trigger: CCTGAAACCAAAACTCATCCAAGCATCGAGAGAGGG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGAAATGATGCACCTCTaGTCAAAAGAAAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEEMMHL*SKERAM
Trigger: CATGGCCCTTTCTTTTGACCAGAGGTGCATCATTTC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGACTTCTGTGCAGACTTaGAGATTTCGTATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKTSVQT*RFRMLF
Trigger: GAAGAGCATACGAAATCTTCAAGTCTGCACAGAAGT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCTGTCCTTTATCTCCTTaGAGTTTACTGAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFCPLSP*SLLKKS
Trigger: GCTTTTCTTCAGTAAACTTCAAGGAGATAAAGGACA...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGAAAGTATTTCTTTCTaGTTGGGTCTTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGESISF*LGLGPS
Trigger: AGATGGACCAAGACCCAATCAGAAAGAAATACTTTC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGGTAAAGCAGAATTCTaGATATGGCGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKGKAEF*IWRTPS
Trigger: AGATGGTGTACGCCATATTCAGAATTCTGCTTTACC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCAAAATAAGAGATCAGTaGGCAGACGTTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGKIRDQ*ADVDAS
Trigger: AGATGCATCAACGTCTGCTCACTGATCTCTTATTTT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGCATAACTGTCTTTGTTaGATGGCTTCTCCACATCTG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEHNCLC*MASPHL
Trigger: CAGATGTGGAGAAGCCATTCAACAAAGACAGTTATG...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCCATCACTTGAGAGATaGGATGAATTGTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKPSLER*DELCCA
Trigger: TGCACAACACAATTCATCTCATCTCTCAAGTGATGG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGAGCTGTGAATGTTGCTaGCACTCTAAGCAATTCCTT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGESCECC*HSKQFL
Trigger: AAGGAATTGCTTAGAGTGTCAGCAACATTCACAGCT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGTTTCCTTAAGAGACTaGCTGTGTCTTTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKVSLRD*LCLSSW
Trigger: CCAAGATGAAAGACACAGTCAGTCTCTTAAGGAAAC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGACCAGCTCCACAACTaGACTGCTGGACTTCATGCA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSDQLHN*TAGLHA
Trigger: TGCATGAAGTCCAGCAGTTCAGTTGTGGAGCTGGTC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTGTCTGCAGAGTATTaGGCACACAATGACTCAAAT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGLSAEY*AHNDSN
Trigger: ATTTGAGTCATTGTGTGCTCAATACTCTGCAGACAA...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGGCTGCTCTTATCAAATaGTCACACATCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKAALIK*SHIFSS
Trigger: AGAGGAGAAGATGTGTGATCATTTGATAAGAGCAGC...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATGAAGCTTTGAATAGCTaGCGTGGAGTGGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHEALNS*RGVANE
Trigger: TTCATTAGCCACTCCACGTCAGCTATTCAAAGCTTC...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTCATATTTGAAGCTTTaGATAGCTGACGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGESYLKL*IADVEW
Trigger: CCACTCCACGTCAGCTATTCAAAGCTTCAAATATGA...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGTTGATCATCTTCCCATaGCTCAAATCGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKLIIFP*LKSLCK
Trigger: TTTGCAGAGCGATTTGAGTCATGGGAAGATGATCAA...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTTGATCATCTTCCCATaGCTCAAATCGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGELIIFP*LKSLCK
Trigger: TTTGCAGAGCGATTTGAGTCATGGGAAGATGATCAA...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCAACAAAACTTGCAGTTaGGTAATGAGTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFNKTCS*VMSTIV
Trigger: CACTATGGTACTCATTACTCAACTGCAAGTTTTGTT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGAACGTCCTATCTGCATaGTCAAATTTCCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGENVLSA*SNFPPC
Trigger: ACAAGGAGGGAAATTTGATCATGCAGATAGGACGTT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGAGATCAATCCATTGGTaGAGCTGGCAGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGERSIHW*SWQETN
Trigger: ATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATAAGCCATTCCAGAAATaGTGCACCTCTGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHKPFQK*CTSGQK
Trigger: CTTTTGACCAGAGGTGCATCATTTCTGGAATGGCTT...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCTTGAAGATTTCGTATaGTCTTCTTCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHLEDFV*SSSEWL
Trigger: CAGCCATTCTGAAGAAGAGCATACGAAATCTTCAAG...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATCTCGGCGAACCTCCATaGTCTCTGGGCACTGGGGAG +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYLGEPP*SLGTGE
Trigger: CTCCCCAGTGCCCAGAGAGCATGGAGGTTCGCCGAG...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGTCTACTGCATCTGGTaGTGTTCCTTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKVYCIW*CSLCCL
Trigger: CAGACAGCACAAGGAACAGCACCAGATGCAGTAGAC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCTCTGCAAAGAATGCTaGTCGTTTGGGATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHLCKEC*SFGIQS
Trigger: GCTTTGAATCCCAAACGAGCAGCATTCTTTGCAGAG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAATTGAGGGCTCGCACTaGCTCTGGTCCTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKIEGSH*LWSLLF
Trigger: AAACAACAAGGACCAGAGGCAGTGCGAGCCCTCAAT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGATTGAGGGCTCGCACTaGCTCTGGTCCTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMIEGSH*LWSLLF
Trigger: AAACAACAAGGACCAGAGGCAGTGCGAGCCCTCAAT...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGGCTCTATGAGCAGTTaGGAAGGCGTCTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKGSMSS*EGVCPK
Trigger: TTTTGGACAGACGCCTTCGCAACTGCTCATAGAGCC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGTATCTCCAATCCCGCTaGTCTTCCCATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKYLQSR*SSHSST
Trigger: GGTACTGGAATGGGAAGAGCAGCGGGATTGGAGATA...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGCATGGCGCTCTGGATaGAATGTGTCAAAACTGCCT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKAWRSG*NVSKLP
Trigger: AGGCAGTTTTGACACATTCCATCCAGAGCGCCATGC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCTTGTACTCCTCCTATaGAGTGCATGGCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSLVLLL*SAWRSG
Trigger: TCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCGCAGCCCATTCCTTTaGTCAAAAGCCGGAATCATG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLERSPFL*SKAGIM
Trigger: CATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGCGCAGCCCATTCCTTTaGTCAAAAGCCGGAATCATG +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMRSPFL*SKAGIM
Trigger: CATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCG...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGATGTCGTTGAGGCTGTaGTGCTTCTGTGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKMSLRL*CFCART
Trigger: AGTACGAGCACAGAAGCACCACAGCCTCAACGACAT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTTGCTGTATCTCCTCTaGCTTTCAGCTGTGAATGTT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGELLYLL*LSAVNV
Trigger: AACATTCACAGCTGAAAGCCAGAGGAGATACAGCAA...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGTGTGACTCCATCTGCTaGCATATTCACCAAGCTCCG +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKCDSIC*HIHQAP
Trigger: CGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACA...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATACCATAGTGGAACTTTaGAACTTGATCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHTIVEL*NLIIFP
Trigger: TGGGAAGATGATCAAGTTCCAAAGTTCCACTATGGT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAAGGCATTGCCAGGCCTaGCTGGGTGTTGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGRHCQA*LGVGRN
Trigger: GTTGCGGCCAACACCCAGCCAGGCCTGGCAATGCCT...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTAGGCATTGCCAGGCCTaGCTGGGTGTTGGCCGCAAC +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLRHCQA*LGVGRN
Trigger: GTTGCGGCCAACACCCAGCCAGGCCTGGCAATGCCT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGCTTGGATGAGTTTTaGTTTCAGGCAATTTTCGGG +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGECLDEF*FQAIFG
Trigger: CCCGAAAATTGCCTGAAACCAAAACTCATCCAAGCA...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATACTTCTGTGCAGACTTaGAGATTTCGTATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHTSVQT*RFRMLF
Trigger: GAAGAGCATACGAAATCTTCAAGTCTGCACAGAAGT...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAATCCGCTGTCTCCGATaGTCCCAGGAAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRIRCLR*SQEAFV
Trigger: GACAAATGCTTCCTGGGATCATCGGAGACAGCGGAT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTCCCGCGGGTTGTACGTaGAGGCAATGGCACTGGACA +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLPAGCT*RQWHWT
Trigger: TGTCCAGTGCCATTGCCTTCACGTACAACCCGCGGG...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGAAAGTATTTCTTTCTaGTTGGGTCTTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGEESISF*LGLGPS
Trigger: AGATGGACCAAGACCCAATCAGAAAGAAATACTTTC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAATGCAGCATCTTCTTCTaGGGGAGAACTTATGGAAGC +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKCSIFF*GRTYGS
Trigger: GCTTCCATAAGTTCTCCCTCAGAAGAAGATGCTGCA...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGCATCTGAGACCACTTaGACTCAGGAATGCGAAACA +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKASETT*TQECET
Trigger: TGTTTCGCATTCCTGAGTTCAAGTGGTCTCAGATGC...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCCATCACTTGAGAGATaGGATGAATTGTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHPSLER*DELCCA
Trigger: TGCACAACACAATTCATCTCATCTCTCAAGTGATGG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAATGTCTCTGTACTTTaGGACCATCAGAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKNVSVL*DHQNRD
Trigger: ATCTCTGTTCTGATGGTCTCAAAGTACAGAGACATT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCTTCCTCACCAAGGCCTaGGTCCCTCCTGCGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLFLTKA*VPPASA
Trigger: TGCACTCGCAGGAGGGACTCAGGCCTTGGTGAGGAA...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTTTCTCATCCACGGATaGCAGAGTATCGTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLFLIHG*QSIVVA
Trigger: GGCGACGACGATACTCTGTCATCCGTGGATGAGAAA...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTGGAACTTTGGAACTTaGTCATCTTCCCATGACTCA +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHWNFGT*SSSHDS
Trigger: TGAGTCATGGGAAGATGATCAAGTTCCAAAGTTCCA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGGTAATAGAACACATTaGGGGCTCGCACTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRGNRTH*GLALPL
Trigger: CAGAGGCAGTGCGAGCCCTCAATGTGTTCTATTACC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGTTATTGAGTTCAGGTTaGCAGCTCCTTCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKLLSSG*QLLHRL
Trigger: TAACCTATGAAGGAGCTGTCAACCTGAACTCAATAA...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACCAAAACTTCGGATCTaGGCTTCCACAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRPKLRI*ASTASL
Trigger: GAGAGAGGCTGTGGAAGCTCAGATCCGAAGTTTTGG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCCATTCATGGAGTGTATaGGACACGGCCCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLHSWSV*DTALLG
Trigger: CCCAAGAAGGGCCGTGTCTCATACACTCCATGAATG...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAACGTTTTCATAGAAGATaGCACAGTGACCCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKRFHRR*HSDPLS
Trigger: CGAGAGAGGGTCACTGTGTCATCTTCTATGAAAACG...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCATGCTCCAGACTTCTaGTTGGCAAGTGACATCACA +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEHAPDF*LASDIT
Trigger: TGTGATGTCACTTGCCAAGCAGAAGTCTGGAGCATG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGTCAACGAGAAGATCTaGAATCATACTGTCAACTTT +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGVNEKI*NHTVNF
Trigger: AAAGTTGACAGTATGATTGCAGATCTTCTCGTTGAC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATGGAATGTGTCAAAACTaGCTTTACATCCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHGMCQN*LYILEH
Trigger: ATGCTCCAGGATGTAAAGGCAGTTTTGACACATTCC...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTCCGGCAAGGTTAGTTaGTTTCATCCCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSSGKVS*FHPSIQ
Trigger: CTGGATGGAGGGATGAAAGCAACTAACCTTGCCGGA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGGTTCCTTGTGCTGTCTaGTCCTGTTGCCTTGATATC +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEVPCAV*SCCLDI
Trigger: GATATCAAGGCAACAGGAGCAGACAGCACAAGGAAC...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGCCTTTGTTGGTCTACTaGATCTGGTGCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMPLLVY*IWCCSL
Trigger: CAAGGAACAGCACCAGATGCAGTAGACCAACAAAGG...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATGTCTCTGAAAACAACTaGTCGAAGCCGATTAATGTC +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHVSENN*SKPINV
Trigger: GACATTAATCGGCTTCGAGCAGTTGTTTTCAGAGAC...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCACTGTGACTCCATCTaGTGGCATATTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEHCDSI*WHIHQA
Trigger: AGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAATGTAATACTCATGTGTaGAGCTGGGTCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKCNTHV*SWVLWD
Trigger: GTCCCACAAGACCCAGCTGCACACATGAGTATTACA...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGCTCCACAACTGAACTaGTGGACTTCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSAPQLN*WTSCRP
Trigger: TGGTCTGCATGAAGTCCAGCAGTTCAGTTGTGGAGC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCTCTTCTCTTTTGTCTaGAGAGTATTGAGCACACAA +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKLFSFV*RVLSTQ
Trigger: TTGTGTGCTCAATACTCTGCAGACAAAAGAGAAGAG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTACAGCAACTCTGTTTaGCATAAAGATCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHYSNSV*HKDLQS
Trigger: GCTCTGGAGATCTTTATGGCAAACAGAGTTGCTGTA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGACAGCAGGCATTaGCAGGCCTGGCTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSDDSRH*QAWLGV
Trigger: AACACCCAGCCAGGCCTGGCAATGCCTGCTGTCATC...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTATCTCCAATCCCGCTaGTCTTCCCATTCCAGTACC +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSYLQSR*SSHSST
Trigger: GGTACTGGAATGGGAAGAGCAGCGGGATTGGAGATA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAACAGACCTTCTGTATATaGCAAGATCTCAGAGTGCGC +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKQTFCI*QDLRVR
Trigger: GCGCACTCTGAGATCTTGGCATATACAGAAGGTCTG...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCACTGCCTTTACATCCTaGAGCATGAGTGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLTAFTS*SMSACG
Trigger: GCCACACGCACTCATGCTCCAGGATGTAAAGGCAGT...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCGCAGCCCATTCCTTTaGTCAAAAGCCGGAATCATG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSRSPFL*SKAGIM
Trigger: CATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGACTGTACAGTTGCCTaGGGAACAGGAACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKDCTVA*GTGTSD
Trigger: ATCAGAAGTTCCTGTTCCCCAGGCAACTGTACAGTC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGCCATCCAGCATCTCATaGCTGTCTGACTGTACAGTT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKPSSIS*LSDCTV
Trigger: AACTGTACAGTCAGACAGCCATGAGATGCTGGATGG...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTCTTCTGCTCAGAAGTaGCAGGAGCCTCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSSSAQK*QEPQRH
Trigger: ATGTCTCTGAGGCTCCTGCCACTTCTGAGCAGAAGA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCATGTCGTTGAGGCTGTaGTGCTTCTGTGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSMSLRL*CFCART
Trigger: AGTACGAGCACAGAAGCACCACAGCCTCAACGACAT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGAGTCCCTCCTTTGTTaGTCTACTGCATCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSESLLC*STASGA
Trigger: AGCACCAGATGCAGTAGACCAACAAAGGAGGGACTC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGGAATGCGAAACATGGTaGATCTGGAGTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMECETW*IWSPSF
Trigger: AAAGGAGGGACTCCAGATCCACCATGTTTCGCATTC...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCACTGTCTTTGTTGAATaGCTTCTCCACATCTGTATA +
Preference number: 4 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGTVFVE*LLHICI
Trigger: TATACAGATGTGGAGAAGCCATTCAACAAAGACAGT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCCCACAACTGAACTGCTaGACTTCATGCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLPQLNC*TSCRPG
Trigger: GCCTGGTCTGCATGAAGTCCAGCAGTTCAGTTGTGG...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGAGGTAATCCAAAACTaGTTCCCACACCAACACGAG +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKEVIQN*FPHQHE
Trigger: CTCGTGTTGGTGTGGGAACCAGTTTTGGATTACCTC...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATATTCAAAGCTCCTATTaGCTTGGACAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHIQSSY*LGQISE
Trigger: TTCAGAGATTTGTCCAAGCCAATAGGAGCTTTGAAT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATAGAATGCTGCTCGTTTaGGATTCAAAGCTCCTATTG +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHRMLLV*DSKLLL
Trigger: CAATAGGAGCTTTGAATCCCAAACGAGCAGCATTCT...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTCTGTGAACATCAATaGACTCGCCTGCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVCEHQ*TRLHGR
Trigger: TCGGCCATGCAGGCGAGTCCATTGATGTTCACAGAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTGTTGGCCGCAACGTaGGTGACTGGAGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVLAAT*VTGEFE
Trigger: TTCGAATTCTCCAGTCACCCACGTTGCGGCCAACAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCATTGCCAGGCCTGGCTaGGTGTTGGCCGCAACGTGG +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLIARPG*VLAATW
Trigger: CCACGTTGCGGCCAACACCCAGCCAGGCCTGGCAAT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCAGGATCGATTTCCACTaGCAGCTGGTATGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLRIDFH*QLVWLV
Trigger: GACCAGCCATACCAGCTGCCAGTGGAAATCGATCCT...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGATGCACTTGGATGCTCTaGTCCAGGAGGTCTGTTACC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRCTWML*SRRSVT
Trigger: GGTAACAGACCTCCTGGACCAGAGCATCCAAGTGCA...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGGTGACAACATCCCAATaGCCAAACACCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEVTTSQ*PNTTWI
Trigger: GATCCAAGTGGTGTTTGGCCATTGGGATGTTGTCAC...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTGCTTGGATGAGTTTTaGTTTCAGGCAATTTTCGGG +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHCLDEF*FQAIFG
Trigger: CCCGAAAATTGCCTGAAACCAAAACTCATCCAAGCA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGACATCCGTCTCCACGGTaGCCTGCAGCTTCCCGTTCA +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGHPSPR*PAASRS
Trigger: TGAACGGGAAGCTGCAGGCCACCGTGGAGACGGATG...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGCTCCTTGAAGTTTACTaGAGAAAAGCTTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: YLVASDLETGLWASGHGELLEVY*RKALVL
Trigger: GAGAACTAAAGCTTTTCTTCAGTAAACTTCAAGGAG...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTTCAAGCCCATGTCGTTaGGGCTGTGGTGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSSSPCR*GCGASV
Trigger: CACAGAAGCACCACAGCCTCAACGACATGGGCTTGA...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGCATCTGAGACCACTTaGACTCAGGAATGCGAAACA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSASETT*TQECET
Trigger: TGTTTCGCATTCCTGAGTTCAAGTGGTCTCAGATGC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATAAAATAAGAGATCAGTaGGCAGACGTTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHKIRDQ*ADVDAS
Trigger: AGATGCATCAACGTCTGCTCACTGATCTCTTATTTT...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTACCCCCACAAGCCATaGCCATATTGTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSYPHKP*PYCPSL
Trigger: AAGTGATGGACAATATGGTCATGGCTTGTGGGGGTA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGAGAGTTCAGAGGAAGTaGCAGAGAGAGTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKRVQRK*QRECLL
Trigger: TAAAAGGCACTCTCTCTGTCACTTCCTCTGAACTCT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGGAAGCTTTGAATAGCTaGCGTGGAGTGGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMEALNS*RGVANE
Trigger: TTCATTAGCCACTCCACGTCAGCTATTCAAAGCTTC...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCGTTTTCATAGAAGATaGCACAGTGACCCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSRFHRR*HSDPLS
Trigger: CGAGAGAGGGTCACTGTGTCATCTTCTATGAAAACG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCCACTCGTATTTGACTaGATGGTAAAGCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHPLVFD*MVKQNS
Trigger: AGAATTCTGCTTTACCATGCAGTCAAATACGAGTGG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTGTAATACTCATGTGTaGAGCTGGGTCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSCNTHV*SWVLWD
Trigger: GTCCCACAAGACCCAGCTGCACACATGAGTATTACA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGGCCTTCTCCAGTGCATaGTCTAGCCTTTCTGTAATA +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEAFSSA*SSLSVI
Trigger: TATTACAGAAAGGCTAGAGCATGCACTGGAGAAGGC...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCAACTGCTGGACTTCATaGAGACCAGGCTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSNCWTS*RPGLFL
Trigger: AAGGAACAAGCCTGGTCTGCATGAAGTCCAGCAGTT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATGTCATCACCTGTTGGTaGCCGGGAAGGGGCACGATT +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYVITCW*PGRGTI
Trigger: AATCGTGCCCCTTCCCGGCCACCAACAGGTGATGAC...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAATCTCCAAATCAAACTaGCCTCCTACCAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKISKSN*PPTSRL
Trigger: TAACCTGCTGGTAGGAGGCCAGTTTGATTTGGAGAT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCTCCAGACTTCTGCTTaGCAAGTGACATCACACTTT +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLELQTSA*QVTSHF
Trigger: AAAGTGTGATGTCACTTGCCAAGCAGAAGTCTGGAG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGCATGGCGCTCTGGATaGAATGTGTCAAAACTGCCT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRAWRSG*NVSKLP
Trigger: AGGCAGTTTTGACACATTCCATCCAGAGCGCCATGC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGACTGCTCTGCTGACGTaGGATTTGGAAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLETALLT*DLEDFS
Trigger: TGAAAAGTCTTCCAAATCCCACGTCAGCAGAGCAGT...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTACTGTGGCAGGGTCTaGGAAGTTGAACATTACAGC +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSYCGRV*EVEHYS
Trigger: GCTGTAATGTTCAACTTCCCAGACCCTGCCACAGTA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCTAATGAAATACGCCTaGTCTGAGGTAATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHLMKYA*SEVIQN
Trigger: GTTTTGGATTACCTCAGACCAGGCGTATTTCATTAG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATACCATAGTGGAACTTTaGAACTTGATCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHTIVEL*NLIIFP
Trigger: TGGGAAGATGATCAAGTTCCAAAGTTCCACTATGGT...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTGGCCAAACACCACTTaGATCAATTTTCCTGTATCT +
Preference number: 4 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHWPNTT*INFPVS
Trigger: AGATACAGGAAAATTGATCCAAGTGGTGTTTGGCCA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGGAAATGATGCACCTCTaGTCAAAAGAAAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEEMMHL*SKERAM
Trigger: CATGGCCCTTTCTTTTGACCAGAGGTGCATCATTTC...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTCAGGACCGTACTTCTaGGGCATGTGCTTTAACACT +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLSGPYF*GMCFNT
Trigger: AGTGTTAAAGCACATGCCTCAGAAGTACGGTCCTGA...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACACCCCACTCGTATTTaGCTGCATGGTAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRHPTRI*LHGKAE
Trigger: TTCTGCTTTACCATGCAGTCAAATACGAGTGGGGTG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCTATTTCTAGTGAAATaGGGAGAGATGGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLELFLVK*GEMGES
Trigger: GGATTCTCCCATCTCTCCTCATTTCACTAGAAATAG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTACCCCCACAAGCCATaGCCATATTGTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLYPHKP*PYCPSL
Trigger: AAGTGATGGACAATATGGTCATGGCTTGTGGGGGTA...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCAGGCTAATTAGCCTCTaGAGAAATGTCACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSRLISL*RNVTEA
Trigger: AGCCTCAGTGACATTTCTTCAGAGGCTAATTAGCCT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAGCTGTGAATGTTGCTaGCACTCTAAGCAATTCCTT +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMSCECC*HSKQFL
Trigger: AAGGAATTGCTTAGAGTGTCAGCAACATTCACAGCT...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCAGCAGTTCTTGTCCATaGCTACCTAAAAGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSSSSCP*LPKSVR
Trigger: TCGGACACTTTTAGGTAGTCATGGACAAGAACTGCT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCGGGAACACAGCAGCATaGCCAGCTCCACAACTGAAC +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLGNTAA*PAPQLN
Trigger: GTTCAGTTGTGGAGCTGGTCATGCTGCTGTGTTCCC...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGACGGCGAGAAAAGATTaGTCTTATCTCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLETARKD*SYLCEQ
Trigger: CTGTTCACAGAGATAAGATCAATCTTTTCTCGCCGT...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAATTGATCATCTTCCCATaGCTCAAATCGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKLIIFP*LKSLCK
Trigger: TTTGCAGAGCGATTTGAGTCATGGGAAGATGATCAA...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGAACGTCCTATCTGCATaGTCAAATTTCCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKNVLSA*SNFPPC
Trigger: ACAAGGAGGGAAATTTGATCATGCAGATAGGACGTT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGAGGGTGGGGCTCTATaGGCAGTTGCGAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLEGGAL*AVAKAS
Trigger: AGACGCCTTCGCAACTGCTCATAGAGCCCCACCCTC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGAGTAACAGTTTATGGTaGTCAGCGAGGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKSNSLW*SARKRS
Trigger: TGACCTTTTCCTCGCTGAGCACCATAAACTGTTACT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGTTACAAGCAAGCATCTaGTCCTGCATAGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLELQASI*SCIAIE
Trigger: CTCAATTGCTATGCAGGAGCAGATGCTTGCTTGTAA...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGCAAAGTTCAAGTACTaGTCTGCTGACGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSAKFKY*SADVGF
Trigger: AAATCCCACGTCAGCAGAGCAGTACTTGAACTTTGC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAAGGGGCATCCCATTCTaGAGATTGCTCAAATACTTT +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKRGIPF*RLLKYF
Trigger: AAAGTATTTGAGCAATCTGCAGAATGGGATGCCCCT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTATCTGGTTCTTCTCTaGCTTCAGAGGCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLYLVLL*LQRQLQ
Trigger: CTGTAGCTGCCTCTGAAGGCAGAGAAGAACCAGATA...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGATATCTGGTTCTTCTCTaGCTTCAGAGGCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRYLVLL*LQRQLQ
Trigger: CTGTAGCTGCCTCTGAAGGCAGAGAAGAACCAGATA...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAAAACCAAGAGAACTTaGAAATATAAGCACATCCAC +
Preference number: 4 (lower is better)
Translates to: HTATVKALACSKVLWASKKTKRT*KYKHIH
Trigger: GTGGATGTGCTTATATTTGCAAGTTCTCTTGGTTTT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGATACTGGGCTCTTTGCTaGAGATTTCCCCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRYWALC*RFPHGN
Trigger: ATTCCCATGGGGAAATCTGCAGCAAAGAGCCCAGTA...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAATTAATGTCCATGTCTTaGAGGAGCCTGTCAAGATCT +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKLMSMS*RSLSRS
Trigger: AGATCTTGACAGGCTCCTGCAAGACATGGACATTAA...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACACTGTGACTCCATCTaGTGGCATATTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRHCDSI*WHIHQA
Trigger: AGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGGCTCCACAACTGAACTaGTGGACTTCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQAPQLN*WTSCRP
Trigger: TGGTCTGCATGAAGTCCAGCAGTTCAGTTGTGGAGC...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCATATCCTCTGCTCTCTaGCTGCTCAGGATAAATTCG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSISSAL*LLRINS
Trigger: CGAATTTATCCTGAGCAGGCAGAGAGCAGAGGATAT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGACGAGGACGACTTACTaGAGAGCTCCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVTRTTY*RAPPGS
Trigger: GGAGCCTGGGGGAGCTCTGCAGTAAGTCGTCCTCGT...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGTACAGCAACTCTGTTTaGCATAAAGATCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKYSNSV*HKDLQS
Trigger: GCTCTGGAGATCTTTATGGCAAACAGAGTTGCTGTA...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACCCCGTCATCACCTGTTaGTGGCCGGGAAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHPVITC*WPGRGT
Trigger: CGTGCCCCTTCCCGGCCACCAACAGGTGATGACGGG...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCATCTCCAAATCAAACTaGCCTCCTACCAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSISKSN*PPTSRL
Trigger: TAACCTGCTGGTAGGAGGCCAGTTTGATTTGGAGAT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCTGTCAAATTATAGCTaGCCAGCACTCCCAACATGT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSLSNYS*PALPTC
Trigger: ACATGTTGGGAGTGCTGGCCAGCTATAATTTGACAG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGATGCAGCGCTCTTTCCTaGAAAGTTGAAAAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRCSALS*KVEKGV
Trigger: GACGCCTTTTTCAACTTTCCAGGAAAGAGCGCTGCA...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATGACAAACCCTCACCTTaGAGCTCTGTGGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYDKPSP*SSVGRP
Trigger: TGGTCTGCCCACAGAGCTCCAAGGTGAGGGTTTGTC...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCACTCATGTGTGCAGCTaGGTCTTGTGGGACGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLTHVCS*VLWDGA
Trigger: GGCTCCGTCCCACAAGACCCAGCTGCACACATGAGT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGAGGTAATCCAAAACTaGTTCCCACACCAACACGAG +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGREVIQN*FPHQHE
Trigger: CTCGTGTTGGTGTGGGAACCAGTTTTGGATTACCTC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAGAATGCTGCTCGTTTaGGATTCAAAGCTCCTATTG +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMRMLLV*DSKLLL
Trigger: CAATAGGAGCTTTGAATCCCAAACGAGCAGCATTCT...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCATTCTTCCGAGGTTTTaGCCCAAGGAGGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSILPRF*PKEEVQ
Trigger: TTGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAAT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTGACAACATCCCAATaGCCAAACACCACTTGGATC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVTTSQ*PNTTWI
Trigger: GATCCAAGTGGTGTTTGGCCATTGGGATGTTGTCAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGGGTTAAGAAGAATGTaGTCACACAGCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRGLRRM*SHSCFR
Trigger: CCTGAAACAGCTGTGTGATCACATTCTTCTTAACCC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGTGTTTGTGGATCACCTaGGTACAGATCTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKCLWIT*VQICSI
Trigger: TATAGAACAGATCTGTACTCAGGTGATCCACAAACA...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTGCCAAAGCCAAGAATTaGGCTTGCTTGCTGTCCTCG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLAKAKN*ACLLSS
Trigger: CGAGGACAGCAAGCAAGCTCAATTCTTGGCTTTGGC...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAAGAGTTCAGAGGAAGTaGCAGAGAGAGTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRRVQRK*QRECLL
Trigger: TAAAAGGCACTCTCTCTGTCACTTCCTCTGAACTCT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGAAGCTTTGAATAGCTaGCGTGGAGTGGCTAATGAA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGREALNS*RGVANE
Trigger: TTCATTAGCCACTCCACGTCAGCTATTCAAAGCTTC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCACACAGGATCAGTTATTaGGTTCAGGTTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSHRISY*VQVDSS
Trigger: GGAGCTGTCAACCTGAACTCAATAACTGATCCTGTG...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGACCAAAACTTCGGATCTaGGCTTCCACAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGPKLRI*ASTASL
Trigger: GAGAGAGGCTGTGGAAGCTCAGATCCGAAGTTTTGG...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCAGAAGTGACAGACCTATaGGAGGATCGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSEVTDL*EDRFPL
Trigger: CAGTGGAAATCGATCCTCTCATAGGTCTGTCACTTC...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGGAATGTGTCAAAACTaGCTTTACATCCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSGMCQN*LYILEH
Trigger: ATGCTCCAGGATGTAAAGGCAGTTTTGACACATTCC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTTACAAGCAAGCATCTaGTCCTGCATAGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSLQASI*SCIAIE
Trigger: CTCAATTGCTATGCAGGAGCAGATGCTTGCTTGTAA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAATCATCACCTTTCCGCTaGTCTTCCCTAAATATATTG +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKSSPFR*SSLNIL
Trigger: CAATATATTTAGGGAAGAGCAGCGGAAAGGTGATGA...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTTAATGTCCATGTCTTaGAGGAGCCTGTCAAGATCT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSLMSMS*RSLSRS
Trigger: AGATCTTGACAGGCTCCTGCAAGACATGGACATTAA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCATATCCTCTGCTCTCTaGCTGCTCAGGATAAATTCG +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLISSAL*LLRINS
Trigger: CGAATTTATCCTGAGCAGGCAGAGAGCAGAGGATAT...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTCCCCCAGGCTCCATaGTTGTCTGTGAGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTLPQAP*LSVRRL
Trigger: CAACCTCCTCACAGACAAGCATGGAGCCTGGGGGAG...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGCAGACCTTCTGTATATaGCAAGATCTTTGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKQTFCI*QDLWVN
Trigger: ATTGACCCAAAGATCTTGGCATATACAGAAGGTCTG...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGCAGACCTTCTGTATATaGCAAGATCTTTGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMQTFCI*QDLWVN
Trigger: ATTGACCCAAAGATCTTGGCATATACAGAAGGTCTG...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACTCTGCAAAGAATGCTaGTCGTTTGGGATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRLCKEC*SFGIQS
Trigger: GCTTTGAATCCCAAACGAGCAGCATTCTTTGCAGAG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGGAGAACGTCCTATCTaGATGATCAAATTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRGERPI*MIKFPS
Trigger: GGAGGGAAATTTGATCATGCAGATAGGACGTTCTCC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACTCCAGACTTCTGCTTaGCAAGTGACATCACACTTT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRLQTSA*QVTSHF
Trigger: AAAGTGTGATGTCACTTGCCAAGCAGAAGTCTGGAG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTACTGCCTTTACATCCTaGAGCATGAGTGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLTAFTS*SMSACG
Trigger: GCCACACGCACTCATGCTCCAGGATGTAAAGGCAGT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAACTGCTCTGCTGACGTaGGATTTGGAAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRTALLT*DLEDFS
Trigger: TGAAAAGTCTTCCAAATCCCACGTCAGCAGAGCAGT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATAACCTCCATGCTCTCTaGGCACTGGGGAGAATTTCG +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYNLHAL*ALGRIS
Trigger: CGAAATTCTCCCCAGTGCCCAGAGAGCATGGAGGTT...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTAACCTCCATGCTCTCTaGGCACTGGGGAGAATTTCG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLNLHAL*ALGRIS
Trigger: CGAAATTCTCCCCAGTGCCCAGAGAGCATGGAGGTT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCATGACCACACATATCTaGTTCTTCTCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSMTTHI*FFSAFR
Trigger: TCTGAAGGCAGAGAAGAACCAGATATGTGTGGTCAT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCATGCTGTGGCCACAGTTaGAAACCTAGAATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSCCGHS*KPRILR
Trigger: TCTGAGGATTCTAGGTTTCCAACTGTGGCCACAGCA...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGAGTCCCTCCTTTGTTaGTCTACTGCATCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSESLLC*STASGA
Trigger: AGCACCAGATGCAGTAGACCAACAAAGGAGGGACTC...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTTGCTGTATCTCCTCTaGCTTTCAGCTGTGAATGTT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSLLYLL*LSAVNV
Trigger: AACATTCACAGCTGAAAGCCAGAGGAGATACAGCAA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCCTCGCTGATGGCATCTaGCCCCGCGCTGACACCCAG +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFLADGI*PRADTQ
Trigger: CTGGGTGTCAGCGCGGGGCCAGATGCCATCAGCGAG...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGCCGGTGTCTGAGGCGTaGGTGGGATCTACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVPVSEA*VGSTED
Trigger: GTCTTCAGTAGATCCCACCCACGCCTCAGACACCGG...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGGCCACAAGCTGAGCTaGGGTGCTCAGGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQGHKLS*GAQANR
Trigger: CCTGTTAGCCTGAGCACCCCAGCTCAGCTTGTGGCC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGCTAATGAAATACGCCTaGTCTGAGGTAATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLELMKYA*SEVIQN
Trigger: GTTTTGGATTACCTCAGACCAGGCGTATTTCATTAG...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCAGAATGCTGCTCGTTTaGGATTCAAAGCTCCTATTG +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSRMLLV*DSKLLL
Trigger: CAATAGGAGCTTTGAATCCCAAACGAGCAGCATTCT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAAGAACCTCGGGGAGGGTaGGGCTCTATGAGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQEPRGG*GSMSSC
Trigger: GCAACTGCTCATAGAGCCCCACCCTCCCCGAGGTTC...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTAGGATCGATTTCCACTaGCAGCTGGTATGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLRIDFH*QLVWLV
Trigger: GACCAGCCATACCAGCTGCCAGTGGAAATCGATCCT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGTGTCCTTTATCTCCTTaGAGTTTACTGAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLECPLSP*SLLKKS
Trigger: GCTTTTCTTCAGTAAACTTCAAGGAGATAAAGGACA...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTTCAGGACCGTACTTCTaGGGCATGTGCTTTAACACT +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSSGPYF*GMCFNT
Trigger: AGTGTTAAAGCACATGCCTCAGAAGTACGGTCCTGA...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTTCTTTCCTGGAAAGTTaGAAAAGGCGTCAGGACCGT +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSSFLES*KRRQDR
Trigger: ACGGTCCTGACGCCTTTTTCAACTTTCCAGGAAAGA...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATTTCTGGAACCAGGCTTaGAGAACACGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYFWNQA*RTRSCF
Trigger: GAAACAGGACCGTGTTCTTCAAGCCTGGTTCCAGAA...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACTATTTCTAGTGAAATaGGGAGAGATGGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRLFLVK*GEMGES
Trigger: GGATTCTCCCATCTCTCCTCATTTCACTAGAAATAG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGAGCAGTTCTTGTCCATaGCTACCTAAAAGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQSSSCP*LPKSVR
Trigger: TCGGACACTTTTAGGTAGTCATGGACAAGAACTGCT...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCGCTGCTCTTATCAAATaGTCACACATCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLAALIK*SHIFSS
Trigger: AGAGGAGAAGATGTGTGATCATTTGATAAGAGCAGC...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCAAGTACTCGAAGTTTaGAATCTCTCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQQVLEV*NLSVLP
Trigger: TGGCAGCACAGAGAGATTTCAAACTTCGAGTACTTG...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGAACAAAACTTGCAGTTaGGTAATGAGTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: IGVRWVLLTQYLVASDLENKTCS*VMSTIV
Trigger: CACTATGGTACTCATTACTCAACTGCAAGTTTTGTT...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAAACGTCCTATCTGCATaGTCAAATTTCCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRNVLSA*SNFPPC
Trigger: ACAAGGAGGGAAATTTGATCATGCAGATAGGACGTT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCGGTAATAGAACACATTaGGGGCTCGCACTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLGNRTH*GLALPL
Trigger: CAGAGGCAGTGCGAGCCCTCAATGTGTTCTATTACC...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTATGTACAGCACCTTGGTaGGCAGGAAGGTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLCTAPW*AGRLCH
Trigger: GTGGCACAACCTTCCTGCTCACCAAGGTGCTGTACA...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGGCAAAAATCTGAGCTaGATTAAGAGCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSGKNLS*IKSITE
Trigger: TTCAGTGATGCTCTTAATGCAGCTCAGATTTTTGCC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCCACTCGTATTTGACTaGATGGTAAAGCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSPLVFD*MVKQNS
Trigger: AGAATTCTGCTTTACCATGCAGTCAAATACGAGTGG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTGTCTACTGCATCTGGTaGTGTTCCTTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLVYCIW*CSLCCL
Trigger: CAGACAGCACAAGGAACAGCACCAGATGCAGTAGAC...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTCTCTGAAAACAACTaGTCGAAGCCGATTAATGTC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVSENN*SKPINV
Trigger: GACATTAATCGGCTTCGAGCAGTTGTTTTCAGAGAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATACGAGGACGACTTACTaGAGAGCTCCCCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNTRTTY*RAPPGS
Trigger: GGAGCCTGGGGGAGCTCTGCAGTAAGTCGTCCTCGT...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAGGCTCTATGAGCAGTTaGGAAGGCGTCTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGGSMSS*EGVCPK
Trigger: TTTTGGACAGACGCCTTCGCAACTGCTCATAGAGCC...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGCTACAATATCCCTATTaGACACTTCTCCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKLQYPY*TLLQLQ
Trigger: TTGAAGTTGGAGAAGTGTCCAATAGGGATATTGTAG...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCACTGTCAAATTATAGCTaGCCAGCACTCCCAACATGT +
Preference number: 4 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSLSNYS*PALPTC
Trigger: ACATGTTGGGAGTGCTGGCCAGCTATAATTTGACAG...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TGTTATTATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCTGGAGGGGTTGTCCTTaGGAGACGACTCCAGGCACA +
Preference number: 4 (lower is better)
Translates to: CYYENFPSKAAPSHYICTWRGCP*ETTPGT
Trigger: TGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCA...GGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTATGCTCTCTGGGCACTaGGGAGAATTTCGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLMLSGH*GEFRSR
Trigger: CCTACTTCGAAATTCTCCCCAGTGCCCAGAGAGCAT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTCTGCAGTTCAGTGTTaGATGCAGAATCTATTGAAC +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSSAVQC*MQNLLN
Trigger: GTTCAATAGATTCTGCATCCAACACTGAACTGCAGA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGACTGTACAGTTGCCTaGGGAACAGGAACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSDCTVA*GTGTSD
Trigger: ATCAGAAGTTCCTGTTCCCCAGGCAACTGTACAGTC...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATTCTTCTGCTCAGAAGTaGCAGGAGCCTCAGAGACAT +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYSSAQK*QEPQRH
Trigger: ATGTCTCTGAGGCTCCTGCCACTTCTGAGCAGAAGA...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGACTGTCTTTGTTGAATaGCTTCTCCACATCTGTATA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKTVFVE*LLHICI
Trigger: TATACAGATGTGGAGAAGCCATTCAACAAAGACAGT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGACTGTCTTTGTTGAATaGCTTCTCCACATCTGTATA +
Preference number: 4 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMTVFVE*LLHICI
Trigger: TATACAGATGTGGAGAAGCCATTCAACAAAGACAGT...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTCTGAACTGCATGGGTaGGTCAACAGACAGATCTCC +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSELHG*VNRQIS
Trigger: GGAGATCTGTCTGTTGACCCACCCATGCAGTTCAGA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGATTCAAAGCTCCTATTaGCTTGGACAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKIQSSY*LGQISE
Trigger: TTCAGAGATTTGTCCAAGCCAATAGGAGCTTTGAAT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTGTTTCGCCATGCTCTaGAGACTGAGGAGAACGTCC +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLCFAML*RLRRTS
Trigger: GGACGTTCTCCTCAGTCTCCAGAGCATGGCGAAACA...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGAACCTCGGGGAGGGTaGGGCTCTATGAGCAGTTGC +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNEPRGG*GSMSSC
Trigger: GCAACTGCTCATAGAGCCCCACCCTCCCCGAGGTTC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGACATCTTGCTGGGCTTaGTCTGTGAACATCAATGGA +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQTSCWA*SVNING
Trigger: TCCATTGATGTTCACAGACCAAGCCCAGCAAGATGT...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCGAATGGCCCGAGGGGTaGCAGTTTCACCGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFEWPEG*QFHRQG
Trigger: ACCCTGGCGGTGAAACTGCCACCCCTCGGGCCATTC...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCCAAGTACTGCTCTGCTaGCGTGGGATTTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLQVLLC*RGIWKT
Trigger: AGTCTTCCAAATCCCACGTCAGCAGAGCAGTACTTG...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCGCATCTGAGACCACTTaGACTCAGGAATGCGAAACA +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLASETT*TQECET
Trigger: TGTTTCGCATTCCTGAGTTCAAGTGGTCTCAGATGC...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCACCATCACTTGAGAGATaGGATGAATTGTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSPSLER*DELCCA
Trigger: TGCACAACACAATTCATCTCATCTCTCAAGTGATGG...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGGGCTGGATCCACTGTaGCTCCATCTGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQGLDPL*LHLLAY
Trigger: ATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGATTTTCTGGATTAACTaGGTTGCGGTCACATGGTCT +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQIFWIN*VAVTWS
Trigger: AGACCATGTGACCGCAACTCAGTTAATCCAGAAAAT...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGTTTCTCATCCACGGATaGCAGAGTATCGTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVFLIHG*QSIVVA
Trigger: GGCGACGACGATACTCTGTCATCCGTGGATGAGAAA...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGATTGATCTTATCTCTGTaGACAGCCATTTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRLILSL*TAIFHA
Trigger: TGCATGGAAAATGGCTGTTCACAGAGATAAGATCAA...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGACGGCGAGAAAAGATTaGTCTTATCTCTGTGAACAG +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQTARKD*SYLCEQ
Trigger: CTGTTCACAGAGATAAGATCAATCTTTTCTCGCCGT...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTTATTGAGTTCAGGTTaGCAGCTCCTTCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLLLSSG*QLLHRL
Trigger: TAACCTATGAAGGAGCTGTCAACCTGAACTCAATAA...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGACACAGGATCAGTTATTaGGTTCAGGTTGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGHRISY*VQVDSS
Trigger: GGAGCTGTCAACCTGAACTCAATAACTGATCCTGTG...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACCCAAAACTTCGGATCTaGGCTTCCACAGCCTCTCTC +
Preference number: 4 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHPKLRI*ASTASL
Trigger: GAGAGAGGCTGTGGAAGCTCAGATCCGAAGTTTTGG...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGCTGGGCTTGGTCTGTaGACATCAATGGACTCGCCT +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQAGLGL*TSMDSP
Trigger: AGGCGAGTCCATTGATGTTCACAGACCAAGCCCAGC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAATCCCAGTGCCTTGAGTaGCTGCACTCGGATTCCTTC +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQSQCLE*LHSDSF
Trigger: GAAGGAATCCGAGTGCAGGCACTCAAGGCACTGGGA...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCCATGTCAGAAAGAAATaGTCGGCGAACCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLHVRKK*SANLHA
Trigger: AGCATGGAGGTTCGCCGAGCATTTCTTTCTGACATG...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTAATAGTCACTGGCTCTaGTGCATCAGAAGACGTTTC +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSNSHWL*CIRRRF
Trigger: GAAACGTCTTCTGATGCAGCAGAGCCAGTGACTATT...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTTGGTGCTGTTCCTTGTaGTGTCTGCTCCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTWCCSL*CLLLLP
Trigger: AGGCAACAGGAGCAGACAGCACAAGGAACAGCACCA...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTCCTTTGTTGGTCTACTaGATCTGGTGCTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLPLLVY*IWCCSL
Trigger: CAAGGAACAGCACCAGATGCAGTAGACCAACAAAGG...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAAAAACCAAGAGAACTTaGAAATATAAGCACATCCAC +
Preference number: 4 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKKTKRT*KYKHIH
Trigger: GTGGATGTGCTTATATTTGCAAGTTCTCTTGGTTTT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGATACTGGGCTCTTTGCTaGAGATTTCCCCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGYWALC*RFPHGN
Trigger: ATTCCCATGGGGAAATCTGCAGCAAAGAGCCCAGTA...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATCACTGTGACTCCATCTaGTGGCATATTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYHCDSI*WHIHQA
Trigger: AGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTG...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGTCTCGATATTTAGCTaGTCTTATCAAATGATCACA +
Preference number: 4 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKVSIFS*SYQMIT
Trigger: TGTGATCATTTGATAAGAGCAGCTAAATATCGAGAC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATAAGGATGTCTTCATCTaGAGCATGTTCCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYKDVFI*SMFHGC
Trigger: ACAGCCGTGGAACATGCTGCAGATGAAGACATCCTT...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGTACAGCAACTCTGTTTaGCATAAAGATCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQYSNSV*HKDLQS
Trigger: GCTCTGGAGATCTTTATGGCAAACAGAGTTGCTGTA...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGGAGAACGTCCTATCTaGATGATCAAATTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSGERPI*MIKFPS
Trigger: GGAGGGAAATTTGATCATGCAGATAGGACGTTCTCC...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCACCATGATGACATCTTaGTGGGCTTGGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLTMMTS*WAWSVN
Trigger: GTTCACAGACCAAGCCCAGCAAGATGTCATCATGGT...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCCTACAATATCCCTATTaGACACTTCTCCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSLQYPY*TLLQLQ
Trigger: TTGAAGTTGGAGAAGTGTCCAATAGGGATATTGTAG...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTTGGTCTACTGCATCTaGTGCTGTTCCTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLLVYCI*CCSLCC
Trigger: ACAGCACAAGGAACAGCACCAGATGCAGTAGACCAA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTGAATGCGAAACATGGTaGATCTGGAGTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLECETW*IWSPSF
Trigger: AAAGGAGGGACTCCAGATCCACCATGTTTCGCATTC...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTACCACAACTGAACTGCTaGACTTCATGCAGACCAGGC +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLPQLNC*TSCRPG
Trigger: GCCTGGTCTGCATGAAGTCCAGCAGTTCAGTTGTGG...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGGGCTCGCACTGCCTCTaGTCCTTGTTGTTTATAGCC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVGSHCL*SLLFIA
Trigger: GGCTATAAACAACAAGGACCAGAGGCAGTGCGAGCC...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGTCTGTGAACATCAATaGACTCGCCTGCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLVCEHQ*TRLHGR
Trigger: TCGGCCATGCAGGCGAGTCCATTGATGTTCACAGAC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAAGGCAGCTGGTATGGCTaGTCTTGTACAGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQGSWYG*SCTAPW
Trigger: CCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCC...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAATTGCTCAAATACTTTaGAAACGCAAGGCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRIAQIL*KRKAKF
Trigger: GAACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAAT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCCACCCCACTCGTATTTaGCTGCATGGTAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLHPTRI*LHGKAE
Trigger: TTCTGCTTTACCATGCAGTCAAATACGAGTGGGGTG...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTCTATTGAAAGGCCTTaGGTAGGCTCAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSIERP*VGSMFS
Trigger: GGAGAACATTGAGCCTACTCAAGGCCTTTCAATAGA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATGCCAACTGCTGCAACTaGGGGCAGTTTTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHANCCN*GQFCIR
Trigger: CCTAATGCAAAACTGCCCTCAGTTGCAGCAGTTGGC...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGACCAGCTCCACAACTaGACTGCTGGACTTCATGCA +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQDQLHN*TAGLHA
Trigger: TGCATGAAGTCCAGCAGTTCAGTTGTGGAGCTGGTC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGGGAACACAGCAGCATaGCCAGCTCCACAACTGAAC +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNGNTAA*PAPQLN
Trigger: GTTCAGTTGTGGAGCTGGTCATGCTGCTGTGTTCCC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCATTGTCTGCAGAGTATTaGGCACACAATGACTCAAAT +
Preference number: 4 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSLSAEY*AHNDSN
Trigger: ATTTGAGTCATTGTGTGCTCAATACTCTGCAGACAA...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTTTGATCATCTTCCCATaGCTCAAATCGCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSLIIFP*LKSLCK
Trigger: TTTGCAGAGCGATTTGAGTCATGGGAAGATGATCAA...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTCAGATGTGTCGCGCTaGCTGTTTCGCCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNSDVSR*LFRHAL
Trigger: CAGAGCATGGCGAAACAGTCAGCGCGACACATCTGA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATCTGTGCCGCAGGCTATaGGAGGATCGATTTCCACTG +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNLCRRL*EDRFPL
Trigger: CAGTGGAAATCGATCCTCTCATAGCCTGCGGCACAG...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATATCCTGGAGCATGAGTaGGTGTGGCGAGTGGACGAA +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNILEHE*VWRVDE
Trigger: TTCGTCCACTCGCCACACGCACTCATGCTCCAGGAT...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAGCAAAGTTCAAGTACTaGTCTGCTGACGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGAKFKY*SADVGF
Trigger: AAATCCCACGTCAGCAGAGCAGTACTTGAACTTTGC...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGAAAGCATCCATTCTTaGCACACAGAGCACTGCAGC +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLESIHS*HTEHCS
Trigger: GCTGCAGTGCTCTGTGTGGCAAGAATGGATGCTTTC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTATCCGGCAAGGTTAGTTaGTTTCATCCCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLSGKVS*FHPSIQ
Trigger: CTGGATGGAGGGATGAAAGCAACTAACCTTGCCGGA...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGTCTACTGCATCTGGTaGTGTTCCTTGTGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLVYCIW*CSLCCL
Trigger: CAGACAGCACAAGGAACAGCACCAGATGCAGTAGAC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGTCTACTGGGCTCTTTaGTGCAGATTTCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQVYWAL*CRFPHG
Trigger: CCCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGAC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTGCCTTCTCCAGTGCATaGTCTAGCCTTTCTGTAATA +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLAFSSA*SSLSVI
Trigger: TATTACAGAAAGGCTAGAGCATGCACTGGAGAAGGC...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCAACTGCTGGACTTCATaGAGACCAGGCTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLNCWTS*RPGLFL
Trigger: AAGGAACAAGCCTGGTCTGCATGAAGTCCAGCAGTT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTCTGTGAATATCCTCTaGTCTCTGCCTGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLSVNIL*SLPAQD
Trigger: ATCCTGAGCAGGCAGAGAGCAGAGGATATTCACAGA...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAGGAGAACGTCCTATCTaGATGATCAAATTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGGERPI*MIKFPS
Trigger: GGAGGGAAATTTGATCATGCAGATAGGACGTTCTCC...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCTTGAGGTCAGACACCTaGCGCACTATCACCACCCCG +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFLRSDT*RTITTP
Trigger: CGGGGTGGTGATAGTGCGGCAGGTGTCTGACCTCAA...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATATCTCCAAATCAAACTaGCCTCCTACCAGCAGGTTA +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYISKSN*PPTSRL
Trigger: TAACCTGCTGGTAGGAGGCCAGTTTGATTTGGAGAT...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAACTTGTACTCCTCCTATaGAGTGCATGGCGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQLVLLL*SAWRSG
Trigger: TCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAG...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTATTTCTTTCTGATTaGGTCTTGGTCCATCTAATC +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVFLSD*VLVHLI
Trigger: GATTAGATGGACCAAGACCCAATCAGAAAGAAATAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGATGCTCTCTGGGCACTaGGGAGAATTTCGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVMLSGH*GEFRSR
Trigger: CCTACTTCGAAATTCTCCCCAGTGCCCAGAGAGCAT...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCCCATCCAGCATCTCATaGCTGTCTGACTGTACAGTT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLPSSIS*LSDCTV
Trigger: AACTGTACAGTCAGACAGCCATGAGATGCTGGATGG...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTCCGGTGTCTGAGGCGTaGGTGGGATCTACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTPVSEA*VGSTED
Trigger: GTCTTCAGTAGATCCCACCCACGCCTCAGACACCGG...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCACTCATGTGTGCAGCTaGGTCTTGTGGGACGGAGCC +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFTHVCS*VLWDGA
Trigger: GGCTCCGTCCCACAAGACCCAGCTGCACACATGAGT...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAATTCAAAGCTCCTATTaGCTTGGACAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRIQSSY*LGQISE
Trigger: TTCAGAGATTTGTCCAAGCCAATAGGAGCTTTGAAT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGGCAGCTGGTATGGCTaGTCTTGTACAGCACCTTGG +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNGSWYG*SCTAPW
Trigger: CCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TGTTATTATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAGGATCGATTTCCACTaGCAGCTGGTATGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CYYENFPSKAAPSHYICTRIDFH*QLVWLV
Trigger: GACCAGCCATACCAGCTGCCAGTGGAAATCGATCCT...GGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGAAAGTATTTCTTTCTaGTTGGGTCTTGGTCCATCT +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSESISF*LGLGPS
Trigger: AGATGGACCAAGACCCAATCAGAAAGAAATACTTTC...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTTGCAGCATCTTCTTCTaGGGGAGAACTTATGGAAGC +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTCSIFF*GRTYGS
Trigger: GCTTCCATAAGTTCTCCCTCAGAAGAAGATGCTGCA...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTAAAATAAGAGATCAGTaGGCAGACGTTGATGCATCT +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSKIRDQ*ADVDAS
Trigger: AGATGCATCAACGTCTGCTCACTGATCTCTTATTTT...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTCATAACTGTCTTTGTTaGATGGCTTCTCCACATCTG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLHNCLC*MASPHL
Trigger: CAGATGTGGAGAAGCCATTCAACAAAGACAGTTATG...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTAGCTGTGAATGTTGCTaGCACTCTAAGCAATTCCTT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSCECC*HSKQFL
Trigger: AAGGAATTGCTTAGAGTGTCAGCAACATTCACAGCT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTTCTGCATCAGGAAGTaGTGCATTCCCATTATCACT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLFCIRK*CIPIIT
Trigger: AGTGATAATGGGAATGCATCACTTCCTGATGCAGAA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGCCAACTGCTGCAACTaGGGGCAGTTTTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNANCCN*GQFCIR
Trigger: CCTAATGCAAAACTGCCCTCAGTTGCAGCAGTTGGC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATGCTGCTCTTATCAAATaGTCACACATCTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYAALIK*SHIFSS
Trigger: AGAGGAGAAGATGTGTGATCATTTGATAAGAGCAGC...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACCAGGGTCTGGGAAGTTaGACATTACAGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHQGLGS*TLQQLC
Trigger: ACAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTG...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTGCTGCCACCGCTaGGTCATATTTGAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQLCCHR*VIFEAL
Trigger: CAAAGCTTCAAATATGACTCAGCGGTGGCAGCACAG...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGAACAAAACTTGCAGTTaGGTAATGAGTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQNKTCS*VMSTIV
Trigger: CACTATGGTACTCATTACTCAACTGCAAGTTTTGTT...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTAGATCAATCCATTGGTaGAGCTGGCAGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLRSIHW*SWQETN
Trigger: ATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGCTGGGCTTGGTCTGTaGACATCAATGGACTCGCCT +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTAGLGL*TSMDSP
Trigger: AGGCGAGTCCATTGATGTTCACAGACCAAGCCCAGC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCTGTACAGCACCTTGGTaGGCAGGAAGGTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFCTAPW*AGRLCH
Trigger: GTGGCACAACCTTCCTGCTCACCAAGGTGCTGTACA...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTAGTAACAGTTTATGGTaGTCAGCGAGGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSNSLW*SARKRS
Trigger: TGACCTTTTCCTCGCTGAGCACCATAAACTGTTACT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACAATCCTGGAGCATGAGTaGGTGTGGCGAGTGGACGAA +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITILEHE*VWRVDE
Trigger: TTCGTCCACTCGCCACACGCACTCATGCTCCAGGAT...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTCTCTTTGGCGCCAGATaGTTTAAAAAGTATCCCAGT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLLFGAR*FKKYPS
Trigger: ACTGGGATACTTTTTAAAGCATCTGGCGCCAAAGAG...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTAGCGAGAACAATCCATaGCCAAGCATGACTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTSENNP*PSMTSA
Trigger: AGCTGAAGTCATGCTTGGGCATGGATTGTTCTCGCT...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTAGTCCCTCCTGCGAGTaGATGAGGTGCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTSPSCE*MRCLPM
Trigger: CATTGGAAGGCACCTCATGCACTCGCAGGAGGGACT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATAGTCCCTCCTGCGAGTaGATGAGGTGCCTTCCAATG +
Preference number: 4 (lower is better)
Translates to: DSTSCAFSITHYYSIHINSPSCE*MRCLPM
Trigger: CATTGGAAGGCACCTCATGCACTCGCAGGAGGGACT...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGTGTAATACTCATGTGTaGAGCTGGGTCTTGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVCNTHV*SWVLWD
Trigger: GTCCCACAAGACCCAGCTGCACACATGAGTATTACA...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCATATCCTCTGCTCTCTaGCTGCTCAGGATAAATTCG +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLISSAL*LLRINS
Trigger: CGAATTTATCCTGAGCAGGCAGAGAGCAGAGGATAT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTCTCGATATTTAGCTaGTCTTATCAAATGATCACA +
Preference number: 4 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVSIFS*SYQMIT
Trigger: TGTGATCATTTGATAAGAGCAGCTAAATATCGAGAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TGTTATTATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCGGCTCTATGAGCAGTTaGGAAGGCGTCTGTCCAAAA +
Preference number: 4 (lower is better)
Translates to: CYYENFPSKAAPSHYICTGSMSS*EGVCPK
Trigger: TTTTGGACAGACGCCTTCGCAACTGCTCATAGAGCC...GGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTTGCAGCGCTCTTTCCTaGAAAGTTGAAAAAGGCGTC +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTCSALS*KVEKGV
Trigger: GACGCCTTTTTCAACTTTCCAGGAAAGAGCGCTGCA...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACACTGCCTTTACATCCTaGAGCATGAGTGCGTGTGGC +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHTAFTS*SMSACG
Trigger: GCCACACGCACTCATGCTCCAGGATGTAAAGGCAGT...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATGCATGGCGCTCTGGATaGAATGTGTCAAAACTGCCT +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHAWRSG*NVSKLP
Trigger: AGGCAGTTTTGACACATTCCATCCAGAGCGCCATGC...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCACTGCTCTGCTGACGTaGGATTTGGAAGACTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLTALLT*DLEDFS
Trigger: TGAAAAGTCTTCCAAATCCCACGTCAGCAGAGCAGT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATATGTCGTTGAGGCTGTaGTGCTTCTGTGCTCGTACT +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHMSLRL*CFCART
Trigger: AGTACGAGCACAGAAGCACCACAGCCTCAACGACAT...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACTTGGTCTACTGCATCTaGTGCTGTTCCTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHLVYCI*CCSLCC
Trigger: ACAGCACAAGGAACAGCACCAGATGCAGTAGACCAA...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACGAATTCTGCCACTCCTaGGAACACAGCAGCATGACC +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHEFCHS*EHSSMT
Trigger: GGTCATGCTGCTGTGTTCCCAGGAGTGGCAGAATTC...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTCTAATGAAATACGCCTaGTCTGAGGTAATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSLMKYA*SEVIQN
Trigger: GTTTTGGATTACCTCAGACCAGGCGTATTTCATTAG...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGATAGCTGACGTGGAGTaGCTAATGAAATACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVIADVE*LMKYAW
Trigger: CCAGGCGTATTTCATTAGCCACTCCACGTCAGCTAT...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAAGAATGCTGCTCGTTTaGGATTCAAAGCTCCTATTG +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGRMLLV*DSKLLL
Trigger: CAATAGGAGCTTTGAATCCCAAACGAGCAGCATTCT...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACGTGTTGGCCGCAACGTaGGTGACTGGAGAATTCGAA +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHVLAAT*VTGEFE
Trigger: TTCGAATTCTCCAGTCACCCACGTTGCGGCCAACAC...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACACACTGGCAGCTGGTATaGCTGGTCTTGTACAGCACC +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITHWQLV*LVLYST
Trigger: GGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTG...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGATTTCCACTGGCAGCTaGTATGGCTGGTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVISTGS*YGWSCT
Trigger: TGTACAAGACCAGCCATACCAGCTGCCAGTGGAAAT...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTATTTTCCTGTATCTGTaGAGTAGACCCGGAAACTCT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLIFLYL*SRPGNS
Trigger: AGAGTTTCCGGGTCTACTCCACAGATACAGGAAAAT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATCAAAAGAAAGGGCCATaGCCCGGATTCCAGCATCAC +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNQKKGP*PGFQHH
Trigger: GTGATGCTGGAATCCGGGCCATGGCCCTTTCTTTTG...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR CAA 72 bp CATTCAGATGTGATAGCTATTTCTATAGAGTGGTGTTaGAAGTCCTTCCTTGCTTGGGCTGAAACAGGACCA +
Preference number: 4 (lower is better)
Translates to: HSDVIAISIEWC*KSFLAWAETGP
Trigger: TGGTCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGCTATCACATCTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATATCCGCTGTCTCCGATaGTCCCAGGAAGCATTTGTC +
Preference number: 4 (lower is better)
Translates to: DSTSCAFSITHYYSIHINIRCLR*SQEAFV
Trigger: GACAAATGCTTCCTGGGATCATCGGAGACAGCGGAT...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTGTTTGTGGATCACCTaGGTACAGATCTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLCLWIT*VQICSI
Trigger: TATAGAACAGATCTGTACTCAGGTGATCCACAAACA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTTCTGGAACCAGGCTTaGAGAACACGGTCCTGTTTC +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNFWNQA*RTRSCF
Trigger: GAAACAGGACCGTGTTCTTCAAGCCTGGTTCCAGAA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TGTTATTATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCTACCCCCACAAGCCATaGCCATATTGTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: CYYENFPSKAAPSHYICTYPHKP*PYCPSL
Trigger: AAGTGATGGACAATATGGTCATGGCTTGTGGGGGTA...GGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAAATGTCTCTGTACTTTaGGACCATCAGAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGNVSVL*DHQNRD
Trigger: ATCTCTGTTCTGATGGTCTCAAAGTACAGAGACATT...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTTCTGCATCAGGAAGTaGTGCATTCCCATTATCACT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLFCIRK*CIPIIT
Trigger: AGTGATAATGGGAATGCATCACTTCCTGATGCAGAA...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGACCAGCTCCACAACTaGACTGCTGGACTTCATGCA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTDQLHN*TAGLHA
Trigger: TGCATGAAGTCCAGCAGTTCAGTTGTGGAGCTGGTC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTGGAACTTTGGAACTTaGTCATCTTCCCATGACTCA +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLWNFGT*SSSHDS
Trigger: TGAGTCATGGGAAGATGATCAAGTTCCAAAGTTCCA...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCAACGTCCTATCTGCATaGTCAAATTTCCCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLNVLSA*SNFPPC
Trigger: ACAAGGAGGGAAATTTGATCATGCAGATAGGACGTT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTAGCGAGCTAGGCAAGTaGCAACATCCCAATGGCCAA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTSELGK*QHPNGQ
Trigger: TTGGCCATTGGGATGTTGTCACTTGCCTAGCTCGCT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp TGTTATTATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCCATGCTCCAGACTTCTaGTTGGCAAGTGACATCACA +
Preference number: 4 (lower is better)
Translates to: CYYENFPSKAAPSHYICTHAPDF*LASDIT
Trigger: TGTGATGTCACTTGCCAAGCAGAAGTCTGGAGCATG...GGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCGAGGCCTACTTCTGTaGAGACTTGAAGATTTCGTA +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTRGLLL*RLEDFV
Trigger: TACGAAATCTTCAAGTCTGCACAGAAGTAGGCCTCG...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCCTCTTTGGCGCCAGATaGTTTAAAAAGTATCCCAGT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLLFGAR*FKKYPS
Trigger: ACTGGGATACTTTTTAAAGCATCTGGCGCCAAAGAG...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCCCACTCGTATTTGACTaGATGGTAAAGCAGAATTCT +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLPLVFD*MVKQNS
Trigger: AGAATTCTGCTTTACCATGCAGTCAAATACGAGTGG...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTCATCACCTTTCCGCTaGTCTTCCCTAAATATATTG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSSPFR*SSLNIL
Trigger: CAATATATTTAGGGAAGAGCAGCGGAAAGGTGATGA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAATATCTGGTTCTTCTCTaGCTTCAGAGGCAGCTACAG +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQYLVLL*LQRQLQ
Trigger: CTGTAGCTGCCTCTGAAGGCAGAGAAGAACCAGATA...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATGTTCCTTGTGCTGTCTaGTCCTGTTGCCTTGATATC +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHVPCAV*SCCLDI
Trigger: GATATCAAGGCAACAGGAGCAGACAGCACAAGGAAC...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTGTTTTCGAGCTCTTTaGTGTATCTCCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLCFRAL*CISSGF
Trigger: AAAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACA...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGCTCCACAACTGAACTaGTGGACTTCATGCAGACCA +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNAPQLN*WTSCRP
Trigger: TGGTCTGCATGAAGTCCAGCAGTTCAGTTGTGGAGC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTCTACAATATCCCTATTaGACACTTCTCCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSLQYPY*TLLQLQ
Trigger: TTGAAGTTGGAGAAGTGTCCAATAGGGATATTGTAG...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTCTCCTATGGAGTGCATaGCGCTCTGGATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTLLWSA*RSGWNV
Trigger: CACATTCCATCCAGAGCGCCATGCACTCCATAGGAG...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATCTCCTATGGAGTGCATaGCGCTCTGGATGGAATGTG +
Preference number: 4 (lower is better)
Translates to: DSTSCAFSITHYYSIHINLLWSA*RSGWNV
Trigger: CACATTCCATCCAGAGCGCCATGCACTCCATAGGAG...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATGAGGTAATCCAAAACTaGTTCCCACACCAACACGAG +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHEVIQN*FPHQHE
Trigger: CTCGTGTTGGTGTGGGAACCAGTTTTGGATTACCTC...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTCTAATGAAATACGCCTaGTCTGAGGTAATCCAAAAC +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLLMKYA*SEVIQN
Trigger: GTTTTGGATTACCTCAGACCAGGCGTATTTCATTAG...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTACCATAGTGGAACTTTaGAACTTGATCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLTIVEL*NLIIFP
Trigger: TGGGAAGATGATCAAGTTCCAAAGTTCCACTATGGT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCGTCTGTGAACATCAATaGACTCGCCTGCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFVCEHQ*TRLHGR
Trigger: TCGGCCATGCAGGCGAGTCCATTGATGTTCACAGAC...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGTCTGTGAACATCAATaGACTCGCCTGCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTVCEHQ*TRLHGR
Trigger: TCGGCCATGCAGGCGAGTCCATTGATGTTCACAGAC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
3UTR CAA 72 bp CTTAACACTACCATTGGCTGGGTAATATATTTCAACTaGGAAACTGCTCTGCGATTGCACATTAATCCCCTC +
Preference number: 4 (lower is better)
Translates to: LNTTIGWVIYFN*ETALRLHINPL
Trigger: GAGGGGATTAATGTGCAATCGCAGAGCAGTTTCCAAGTTGAAATATATTACCCAGCCAATGGTAGTGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAGACCTTTGCTGGTTCTaGAACAATACAAATATGGTT +
Preference number: 4 (lower is better)
Translates to: AISIEWCLKSFLAWAETGDLCWF*NNTNMV
Trigger: AACCATATTTGTATTGTTTCAGAACCAGCAAAGGTC...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTGACCTTTGCTGGTTCTaGAACAATACAAATATGGTT +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLDLCWF*NNTNMV
Trigger: AACCATATTTGTATTGTTTCAGAACCAGCAAAGGTC...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR TCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATGGGTTAAGAAGAATGTaGTCACACAGCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHGLRRM*SHSCFR
Trigger: CCTGAAACAGCTGTGTGATCACATTCTTCTTAACCC...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGCTATTTCTAGTGAAATaGGGAGAGATGGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVLFLVK*GEMGES
Trigger: GGATTCTCCCATCTCTCCTCATTTCACTAGAAATAG...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGCATAACTGTCTTTGTTaGATGGCTTCTCCACATCTG +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVHNCLC*MASPHL
Trigger: CAGATGTGGAGAAGCCATTCAACAAAGACAGTTATG...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATAGGCTAATTAGCCTCTaGAGAAATGTCACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHRLISL*RNVTEA
Trigger: AGCCTCAGTGACATTTCTTCAGAGGCTAATTAGCCT...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCAATGTCTCTGTACTTTaGGACCATCAGAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLNVSVL*DHQNRD
Trigger: ATCTCTGTTCTGATGGTCTCAAAGTACAGAGACATT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGTTTCCTTAAGAGACTaGCTGTGTCTTTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLVSLRD*LCLSSW
Trigger: CCAAGATGAAAGACACAGTCAGTCTCTTAAGGAAAC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTTGGGTCAATTTTCTTaGAGTTGGGATCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLLGQFS*SWDPLH
Trigger: ATGAAGAGGATCCCAACTTCAAGAAAATTGACCCAA...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTTATTGAGTTCAGGTTaGCAGCTCCTTCATAGGTTA +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLLLSSG*QLLHRL
Trigger: TAACCTATGAAGGAGCTGTCAACCTGAACTCAATAA...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACGGAATGTGTCAAAACTaGCTTTACATCCTGGAGCAT +
Preference number: 4 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHGMCQN*LYILEH
Trigger: ATGCTCCAGGATGTAAAGGCAGTTTTGACACATTCC...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTATTACAAGCAAGCATCTaGTCCTGCATAGCAATTGAG +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLLQASI*SCIAIE
Trigger: CTCAATTGCTATGCAGGAGCAGATGCTTGCTTGTAA...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGCAAAGTTCAAGTACTaGTCTGCTGACGTGGGATTT +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQAKFKY*SADVGF
Trigger: AAATCCCACGTCAGCAGAGCAGTACTTGAACTTTGC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGAGGGGCATCCCATTCTaGAGATTGCTCAAATACTTT +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVRGIPF*RLLKYF
Trigger: AAAGTATTTGAGCAATCTGCAGAATGGGATGCCCCT...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTGACATATCATGTGTCTaGAGTTCAGTGTTGGATGCA +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTDISCV*SSVLDA
Trigger: TGCATCCAACACTGAACTGCAGACACATGATATGTC...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTTCCGGCAAGGTTAGTTaGTTTCATCCCTCCATCCAG +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTSGKVS*FHPSIQ
Trigger: CTGGATGGAGGGATGAAAGCAACTAACCTTGCCGGA...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACTACTGGGCTCTTTGCTaGAGATTTCCCCATGGGAAT +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHYWALC*RFPHGN
Trigger: ATTCCCATGGGGAAATCTGCAGCAAAGAGCCCAGTA...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTATTAATGTCCATGTCTTaGAGGAGCCTGTCAAGATCT +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLLMSMS*RSLSRS
Trigger: AGATCTTGACAGGCTCCTGCAAGACATGGACATTAA...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGTCTCTGAAAACAACTaGTCGAAGCCGATTAATGTC +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLVSENN*SKPINV
Trigger: GACATTAATCGGCTTCGAGCAGTTGTTTTCAGAGAC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATGCCTTCTCCAGTGCATaGTCTAGCCTTTCTGTAATA +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHAFSSA*SSLSVI
Trigger: TATTACAGAAAGGCTAGAGCATGCACTGGAGAAGGC...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATAACTGCTGGACTTCATaGAGACCAGGCTTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNNCWTS*RPGLFL
Trigger: AAGGAACAAGCCTGGTCTGCATGAAGTCCAGCAGTT...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TGTTATTATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCCTCTGCAAAGAATGCTaGTCGTTTGGGATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: CYYENFPSKAAPSHYICTLCKEC*SFGIQS
Trigger: GCTTTGAATCCCAAACGAGCAGCATTCTTTGCAGAG...GGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTATTGAGGGCTCGCACTaGCTCTGGTCCTTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTIEGSH*LWSLLF
Trigger: AAACAACAAGGACCAGAGGCAGTGCGAGCCCTCAAT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCTCCAGACTTCTGCTTaGCAAGTGACATCACACTTT +
Preference number: 4 (lower is better)
Translates to: MKISPAKQLHHITFAPIHLQTSA*QVTSHF
Trigger: AAAGTGTGATGTCACTTGCCAAGCAGAAGTCTGGAG...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACATGACCACACATATCTaGTTCTTCTCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHMTTHI*FFSAFR
Trigger: TCTGAAGGCAGAGAAGAACCAGATATGTGTGGTCAT...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAACTGCAGATTTCCCCATaGGAATCAGGCTATGTATTG +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQLQISP*ESGYVL
Trigger: CAATACATAGCCTGATTCCCATGGGGAAATCTGCAG...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACATGTGACTCCATCTGCTaGCATATTCACCAAGCTCCG +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITCDSIC*HIHQAP
Trigger: CGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACA...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACATCTGAACTGCATGGGTaGGTCAACAGACAGATCTCC +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITSELHG*VNRQIS
Trigger: GGAGATCTGTCTGTTGACCCACCCATGCAGTTCAGA...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATATTTCCACTGGCAGCTaGTATGGCTGGTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNISTGS*YGWSCT
Trigger: TGTACAAGACCAGCCATACCAGCTGCCAGTGGAAAT...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGTGTTTGTGGATCACCTaGGTACAGATCTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVCLWIT*VQICSI
Trigger: TATAGAACAGATCTGTACTCAGGTGATCCACAAACA...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGGTAAAGCAGAATTCTaGATATGGCGTACACCATCT +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQGKAEF*IWRTPS
Trigger: AGATGGTGTACGCCATATTCAGAATTCTGCTTTACC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAAAAACCTCTCAGTATCTaGAGCCACACTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQKPLSI*SHTRNI
Trigger: GATGTTTCTAGTGTGGCTTCAGATACTGAGAGGTTT...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGTATTGAGCACACAATaGCTCAAATTCTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLVLSTQ*LKFCMS
Trigger: AGACATGCAGAATTTGAGTCATTGTGTGCTCAATAC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACAGAGTTCAGAGGAAGTaGCAGAGAGAGTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHRVQRK*QRECLL
Trigger: TAAAAGGCACTCTCTCTGTCACTTCCTCTGAACTCT...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACTTGATCTTATCTCTGTaGACAGCCATTTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHLILSL*TAIFHA
Trigger: TGCATGGAAAATGGCTGTTCACAGAGATAAGATCAA...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCCAGGGTCTGGGAAGTTaGACATTACAGCAACTCTGT +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFQGLGS*TLQQLC
Trigger: ACAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTG...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAATCATATTTGAAGCTTTaGATAGCTGACGTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQSYLKL*IADVEW
Trigger: CCACTCCACGTCAGCTATTCAAAGCTTCAAATATGA...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATCAAGTACTCGAAGTTTaGAATCTCTCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNQVLEV*NLSVLP
Trigger: TGGCAGCACAGAGAGATTTCAAACTTCGAGTACTTG...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAAAGATCAATCCATTGGTaGAGCTGGCAGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQRSIHW*SWQETN
Trigger: ATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCT...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACGGCAAAAATCTGAGCTaGATTAAGAGCATCACTGAA +
Preference number: 4 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHGKNLS*IKSITE
Trigger: TTCAGTGATGCTCTTAATGCAGCTCAGATTTTTGCC...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTCCTTCATCACTAACTaGTTAATGAACATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSFITN*LMNISK
Trigger: CTTACTGATGTTCATTAAGCAGTTAGTGATGAAGGA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTCATGTCAGAAAGAAATaGTCGGCGAACCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTHVRKK*SANLHA
Trigger: AGCATGGAGGTTCGCCGAGCATTTCTTTCTGACATG...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCAAAACCAAGAGAACTTaGAAATATAAGCACATCCAC +
Preference number: 4 (lower is better)
Translates to: QQSSSITLHLHQFIITHLKTKRT*KYKHIH
Trigger: GTGGATGTGCTTATATTTGCAAGTTCTCTTGGTTTT...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGCTCTTCTCTTTTGTCTaGAGAGTATTGAGCACACAA +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVLFSFV*RVLSTQ
Trigger: TTGTGTGCTCAATACTCTGCAGACAAAAGAGAAGAG...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTAAGGATGTCTTCATCTaGAGCATGTTCCACGGCTGT +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTKDVFI*SMFHGC
Trigger: ACAGCCGTGGAACATGCTGCAGATGAAGACATCCTT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TGTTATTATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAACAGCCATTTTCCATaGAGACCTTCTGTATATGCC +
Preference number: 4 (lower is better)
Translates to: CYYENFPSKAAPSHYICTNSHFP*RPSVYA
Trigger: GGCATATACAGAAGGTCTGCATGGAAAATGGCTGTT...GGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCATAATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTACCATGATGACATCTTaGTGGGCTTGGTCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTTMMTS*WAWSVN
Trigger: GTTCACAGACCAAGCCCAGCAAGATGTCATCATGGT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGAGTGCATGGCGCTCTaGATGGAATGTGTCAAAACT +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITECMAL*MECVKT
Trigger: AGTTTTGACACATTCCATCCAGAGCGCCATGCACTC...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTTCTGCAGTTCAGTGTTaGATGCAGAATCTATTGAAC +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTSAVQC*MQNLLN
Trigger: GTTCAATAGATTCTGCATCCAACACTGAACTGCAGA...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCTTGGTCTACTGCATCTaGTGCTGTTCCTTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFLVYCI*CCSLCC
Trigger: ACAGCACAAGGAACAGCACCAGATGCAGTAGACCAA...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCGAATGCGAAACATGGTaGATCTGGAGTCCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFECETW*IWSPSF
Trigger: AAAGGAGGGACTCCAGATCCACCATGTTTCGCATTC...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATCTGCAGATTTCCCCATaGGAATCAGGCTATGTATTG +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNLQISP*ESGYVL
Trigger: CAATACATAGCCTGATTCCCATGGGGAAATCTGCAG...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTTACTGTGGCAGGGTCTaGGAAGTTGAACATTACAGC +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTYCGRV*EVEHYS
Trigger: GCTGTAATGTTCAACTTCCCAGACCCTGCCACAGTA...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATTACTGTGGCAGGGTCTaGGAAGTTGAACATTACAGC +
Preference number: 4 (lower is better)
Translates to: DSTSCAFSITHYYSIHINYCGRV*EVEHYS
Trigger: GCTGTAATGTTCAACTTCCCAGACCCTGCCACAGTA...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCATAGCTGACGTGGAGTaGCTAATGAAATACGCCTGG +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFIADVE*LMKYAW
Trigger: CCAGGCGTATTTCATTAGCCACTCCACGTCAGCTAT...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCATTCAAAGCTCCTATTaGCTTGGACAAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLIQSSY*LGQISE
Trigger: TTCAGAGATTTGTCCAAGCCAATAGGAGCTTTGAAT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGACCATAGTGGAACTTTaGAACTTGATCATCTTCCCA +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVTIVEL*NLIIFP
Trigger: TGGGAAGATGATCAAGTTCCAAAGTTCCACTATGGT...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTCTTCCGAGGTTTTaGCCCAAGGAGGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHILPRF*PKEEVQ
Trigger: TTGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAAT...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCATTTCCACTGGCAGCTaGTATGGCTGGTCTTGTACA +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFISTGS*YGWSCT
Trigger: TGTACAAGACCAGCCATACCAGCTGCCAGTGGAAAT...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCCCCTCTCTCGATGCTTaGATGAGTTTTGGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFPSLDA*MSFGFR
Trigger: CCTGAAACCAAAACTCATCCAAGCATCGAGAGAGGG...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGTGTCCTTTATCTCCTTaGAGTTTACTGAAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVCPLSP*SLLKKS
Trigger: GCTTTTCTTCAGTAAACTTCAAGGAGATAAAGGACA...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGGACCTTTGCTGGTTCTaGAACAATACAAATATGGTT +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVDLCWF*NNTNMV
Trigger: AACCATATTTGTATTGTTTCAGAACCAGCAAAGGTC...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAATTGCTCAAATACTTTaGAAACGCAAGGCAAAGTTC +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLIAQIL*KRKAKF
Trigger: GAACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAAT...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGGGTTAAGAAGAATGTaGTCACACAGCTGTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTGLRRM*SHSCFR
Trigger: CCTGAAACAGCTGTGTGATCACATTCTTCTTAACCC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTTCTATTGAAAGGCCTTaGGTAGGCTCAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTSIERP*VGSMFS
Trigger: GGAGAACATTGAGCCTACTCAAGGCCTTTCAATAGA...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACATCTATTGAAAGGCCTTaGGTAGGCTCAATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITSIERP*VGSMFS
Trigger: GGAGAACATTGAGCCTACTCAAGGCCTTTCAATAGA...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATGAAATACGCCTGGTCTaGGGTAATCCAAAACTGGTT +
Preference number: 4 (lower is better)
Translates to: DSTSCAFSITHYYSIHINEIRLV*GNPKLV
Trigger: AACCAGTTTTGGATTACCTCAGACCAGGCGTATTTC...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTCAAGTACTCGAAGTTTaGAATCTCTCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTQVLEV*NLSVLP
Trigger: TGGCAGCACAGAGAGATTTCAAACTTCGAGTACTTG...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTAAGCCATTCCAGAAATaGTGCACCTCTGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTKPFQK*CTSGQK
Trigger: CTTTTGACCAGAGGTGCATCATTTCTGGAATGGCTT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCCGAGGCCTACTTCTGTaGAGACTTGAAGATTTCGTA +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFRGLLL*RLEDFV
Trigger: TACGAAATCTTCAAGTCTGCACAGAAGTAGGCCTCG...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGTCAACGAGAAGATCTaGAATCATACTGTCAACTTT +
Preference number: 4 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLVNEKI*NHTVNF
Trigger: AAAGTTGACAGTATGATTGCAGATCTTCTCGTTGAC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCAAGCATCTGCTCCTaGATAGCAATTGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITASICS*IAIEFF
Trigger: GAAGAACTCAATTGCTATGCAGGAGCAGATGCTTGC...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAATCCTTCGCTCTTCGATaGCAGAAGTTTATAGATAAC +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQSFALR*QKFIDN
Trigger: GTTATCTATAAACTTCTGGCATCGAAGAGCGAAGGA...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTGTTTTCGAGCTCTTTaGTGTATCTCCTCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNCFRAL*CISSGF
Trigger: AAAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCGGAGAACGTCCTATCTaGATGATCAAATTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFGERPI*MIKFPS
Trigger: GGAGGGAAATTTGATCATGCAGATAGGACGTTCTCC...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCCTGTCAAATTATAGCTaGCCAGCACTCCCAACATGT +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFLSNYS*PALPTC
Trigger: ACATGTTGGGAGTGCTGGCCAGCTATAATTTGACAG...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CCA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGGTATTTCTTTCTGATTaGGTCTTGGTCCATCTAATC +
Preference number: 4 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVVFLSD*VLVHLI
Trigger: GATTAGATGGACCAAGACCCAATCAGAAAGAAATAC...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACTTGCTGTATCTCCTCTaGCTTTCAGCTGTGAATGTT +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHLLYLL*LSAVNV
Trigger: AACATTCACAGCTGAAAGCCAGAGGAGATACAGCAA...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCATTCTTCCGAGGTTTTaGCCCAAGGAGGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFILPRF*PKEEVQ
Trigger: TTGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAAT...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACAACTTCTGTGCAGACTTaGAGATTTCGTATGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITTSVQT*RFRMLF
Trigger: GAAGAGCATACGAAATCTTCAAGTCTGCACAGAAGT...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTAAACCTCTCAGTATCTaGAGCCACACTAGAAACATC +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTKPLSI*SHTRNI
Trigger: GATGTTTCTAGTGTGGCTTCAGATACTGAGAGGTTT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTTGGGTCAATTTTCTTaGAGTTGGGATCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNLGQFS*SWDPLH
Trigger: ATGAAGAGGATCCCAACTTCAAGAAAATTGACCCAA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTTGATCTTATCTCTGTaGACAGCCATTTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: SHVARISGIIGSTVCIHNLILSL*TAIFHA
Trigger: TGCATGGAAAATGGCTGTTCACAGAGATAAGATCAA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTTGGAACTTTGGAACTTaGTCATCTTCCCATGACTCA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTWNFGT*SSSHDS
Trigger: TGAGTCATGGGAAGATGATCAAGTTCCAAAGTTCCA...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR TCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCAGATCAATCCATTGGTaGAGCTGGCAGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFRSIHW*SWQETN
Trigger: ATTTGTTTCCTGCCAGCTTCACCAATGGATTGATCT...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATAGTAACAGTTTATGGTaGTCAGCGAGGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: DSTSCAFSITHYYSIHINSNSLW*SARKRS
Trigger: TGACCTTTTCCTCGCTGAGCACCATAAACTGTTACT...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTTCCTTCATCACTAACTaGTTAATGAACATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTSFITN*LMNISK
Trigger: CTTACTGATGTTCATTAAGCAGTTAGTGATGAAGGA...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTCTCTTTGGCGCCAGATaGTTTAAAAAGTATCCCAGT +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTLFGAR*FKKYPS
Trigger: ACTGGGATACTTTTTAAAGCATCTGGCGCCAAAGAG...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACTCATCACCTTTCCGCTaGTCTTCCCTAAATATATTG +
Preference number: 4 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHSSPFR*SSLNIL
Trigger: CAATATATTTAGGGAAGAGCAGCGGAAAGGTGATGA...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGACATATCATGTGTCTaGAGTTCAGTGTTGGATGCA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTDISCV*SSVLDA
Trigger: TGCATCCAACACTGAACTGCAGACACATGATATGTC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCGTATTGAGCACACAATaGCTCAAATTCTGCATGTCT +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFVLSTQ*LKFCMS
Trigger: AGACATGCAGAATTTGAGTCATTGTGTGCTCAATAC...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTTTGTCTGCAGAGTATTaGGCACACAATGACTCAAAT +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTLSAEY*AHNDSN
Trigger: ATTTGAGTCATTGTGTGCTCAATACTCTGCAGACAA...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR TCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTTTGATCTTATCTCTGTaGACAGCCATTTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTLILSL*TAIFHA
Trigger: TGCATGGAAAATGGCTGTTCACAGAGATAAGATCAA...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR GCA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACACTTGAAGATTTCGTATaGTCTTCTTCAGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: SNIILTVLHAHSQSHIITLEDFV*SSSEWL
Trigger: CAGCCATTCTGAAGAAGAGCATACGAAATCTTCAAG...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR GCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTCTCTTCTCTTTTGTCTaGAGAGTATTGAGCACACAA +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTLFSFV*RVLSTQ
Trigger: TTGTGTGCTCAATACTCTGCAGACAAAAGAGAAGAG...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGTCTCGATATTTAGCTaGTCTTATCAAATGATCACA +
Preference number: 4 (lower is better)
Translates to: IITASILIFSDTRPRPVQVSIFS*SYQMIT
Trigger: TGTGATCATTTGATAAGAGCAGCTAAATATCGAGAC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATCTCCTTGAAGTTTACTaGAGAAAAGCTTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: DSTSCAFSITHYYSIHINLLEVY*RKALVL
Trigger: GAGAACTAAAGCTTTTCTTCAGTAAACTTCAAGGAG...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR TCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCAACAAAACTTGCAGTTaGGTAATGAGTACCATAGTG +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFNKTCS*VMSTIV
Trigger: CACTATGGTACTCATTACTCAACTGCAAGTTTTGTT...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CCA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGTATTTCTTTCTGATTaGGTCTTGGTCCATCTAATC +
Preference number: 4 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTVFLSD*VLVHLI
Trigger: GATTAGATGGACCAAGACCCAATCAGAAAGAAATAC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR GCA 90 bp CTGAAGAAGCACAATTGTCTAGAAAAATACAGGACCCAGTACAGAATAAATTTCTCCTTCATCACTAACTaGTTAATGAACATCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LKKHNCLEKYRTQYRINFSFITN*LMNISK
Trigger: CTTACTGATGTTCATTAAGCAGTTAGTGATGAAGGA...GAAATTTATTCTGTACTGGGTCCTGTATTTTTCTAGACAATTGTGCTTCTTCAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGGGAGTCCCTCCTTTGTaGGTCTACTGCATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGGVPPL*VYCIWC
Trigger: GCACCAGATGCAGTAGACCAACAAAGGAGGGACTCC...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS CCA 90 bp ACGAAGATGGAGGGGTTGTCCTTGGGAGACGACTCCAGGCACAGCTaGGCATCTGTGGCCCGCGGGTTGTACGTGAAGGCAATGGCACTG +
Preference number: 5 (lower is better)
Translates to: TKMEGLSLGDDSRHS*ASVARGLYVKAMAL
Trigger: CAGTGCCATTGCCTTCACGTACAACCCGCGGGCCACAGATGCCCAGCTGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCATCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGCACTGGGAGTGCACTaGGATGCTCTGGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGALGVH*DALVQE
Trigger: CTCCTGGACCAGAGCATCCAAGTGCACTCCCAGTGC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATGCACTGGGAGTGCACTaGGATGCTCTGGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHALGVH*DALVQE
Trigger: CTCCTGGACCAGAGCATCCAAGTGCACTCCCAGTGC...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCACTATCACCACCCCGTaGTCTCCTCCTGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPTITTP*SPPVSR
Trigger: CCTGCTCACAGGAGGAGACAACGGGGTGGTGATAGT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGTCTGTGGCCCGCGGGTaGTACGTGAAGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKSVARG*YVKAMA
Trigger: TGCCATTGCCTTCACGTACAACCCGCGGGCCACAGA...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGATGGAGGGGTTGTCCTaGGGAGACGACTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKMEGLS*GDDSRH
Trigger: GTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCAT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGAGAAAGCATCCATTCTaGCCACACAGAGCACTGCAG +
Preference number: 5 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGRKHPF*PHRALQ
Trigger: CTGCAGTGCTCTGTGTGGCAAGAATGGATGCTTTCT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCCCCCAGGCTCCATGCTaGTCTGTGAGGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFPQAPC*SVRRLI
Trigger: TATCAACCTCCTCACAGACAAGCATGGAGCCTGGGG...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGGAAGGTTGTGCCACTaGTTCACGGCAAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFGRLCH*FTAKSL
Trigger: CAGGCTCTTTGCCGTGAACAAGTGGCACAACCTTCC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCCTGGTATGGCTGGTCTaGTACAGCACCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFLVWLV*YSTLVS
Trigger: GCTCACCAAGGTGCTGTACAAGACCAGCCATACCAG...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCACAGAAGAAGAGTaGCGTCACGTGACCCCGAGA +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPTTEEE*RHVTPR
Trigger: TCTCGGGGTCACGTGACGCAACTCTTCTTCTGTGGT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCATCTGGTGCTGTTCCTaGTGCTGTCTGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFIWCCS*CCLLLL
Trigger: CAACAGGAGCAGACAGCACAAGGAACAGCACCAGAT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGGAGTCCCTCCTTTGTaGGTCTACTGCATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGGVPPL*VYCIWC
Trigger: GCACCAGATGCAGTAGACCAACAAAGGAGGGACTCC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGAATTCTTCCGAGGTTTaGGCCCAAGGAGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGNSSEV*AQGGSS
Trigger: TGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCGGGCTCTATGAGCAGTaGCGAAGGCGTCTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGGLYEQ*RRRLSK
Trigger: TTTGGACAGACGCCTTCGCAACTGCTCATAGAGCCC...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCTGGTATGGCTGGTCTaGTACAGCACCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHLVWLV*YSTLVS
Trigger: GCTCACCAAGGTGCTGTACAAGACCAGCCATACCAG...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGACCCTCTCTCGATGCTaGGATGAGTTTTGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGTLSRC*DEFWFQ
Trigger: CTGAAACCAAAACTCATCCAAGCATCGAGAGAGGGT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS TCA 90 bp ACGACTCCAGGCACAGCTGGGCATCTGTGGCCCGCGGGTTGTACGTaGAGGCAATGGCACTGGACAGCTTGCCGTCATACAGTAACAGTT +
Preference number: 5 (lower is better)
Translates to: TTPGTAGHLWPAGCT*RQWHWTACRHTVTV
Trigger: AACTGTTACTGTATGACGGCAAGCTGTCCAGTGCCATTGCCTTCACGTACAACCCGCGGGCCACAGATGCCCAGCTGTGCCTGGAGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 90 bp CAAGAGCACCAAGGCAGGCTGGGGGCAGAAGGGCTGGATCCACTGTaGCTCCATCTGCTGGCATATTCACCAAGCTCCGGAGAATGTCCT +
Preference number: 5 (lower is better)
Translates to: QEHQGRLGAEGLDPL*LHLLAYSPSSGECP
Trigger: AGGACATTCTCCGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCCTTCTGCCCCCAGCCTGCCTTGGTGCTCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 90 bp GTGAGCAGGTACTGCCCATCTCTGCTCAGCTGTATGGCCCTTATGTaGTCATCCGTCTCCACGGTGGCCTGCAGCTTCCCGTTCACACTG +
Preference number: 5 (lower is better)
Translates to: VSRYCPSLLSCMALM*SSVSTVACSFPFTL
Trigger: CAGTGTGAACGGGAAGCTGCAGGCCACCGTGGAGACGGATGATCACATAAGGGCCATACAGCTGAGCAGAGATGGGCAGTACCTGCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS TCA 90 bp GGTCAGACACCTGCCGCACTATCACCACCCCGTTGTCTCCTCCTGTaGGCAGGTACTGCCCATCTCTGCTCAGCTGTATGGCCCTTATGT +
Preference number: 5 (lower is better)
Translates to: GQTPAALSPPRCLLL*AGTAHLCSAVWPLC
Trigger: ACATAAGGGCCATACAGCTGAGCAGAGATGGGCAGTACCTGCTCACAGGAGGAGACAACGGGGTGGTGATAGTGCGGCAGGTGTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS GCA 90 bp CACTGGGAGTGCACTTGGATGCTCTGGTCCAGGAGGTCTGTTACCTaGCTCCTGTGTGTCCCTGTGCCGCAGGCTATGAGAGGATCGATT +
Preference number: 5 (lower is better)
Translates to: HWECTWMLWSRRSVT*LLCVPVPQAMRGSI
Trigger: AATCGATCCTCTCATAGCCTGCGGCACAGGGACACACAGGAGGCAGGTAACAGACCTCCTGGACCAGAGCATCCAAGTGCACTCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 90 bp CCCGAGGGGTGGCAGTTTCACCGCCAGGGTTATCTCCAATCCCGCTaGTCTTCCCATTCCAGTACCACAGAAGAAGAGTTGCGTCACGTG +
Preference number: 5 (lower is better)
Translates to: PEGWQFHRQGYLQSR*SSHSSTTEEELRHV
Trigger: CACGTGACGCAACTCTTCTTCTGTGGTACTGGAATGGGAAGAGCAGCGGGATTGGAGATAACCCTGGCGGTGAAACTGCCACCCCTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CCA 90 bp AGACAGATCTCCAAGAGCACCAAGGCAGGCTGGGGGCAGAAGGGCTaGATCCACTGTGACTCCATCTGCTGGCATATTCACCAAGCTCCG +
Preference number: 5 (lower is better)
Translates to: RQISKSTKAGWGQKG*IHCDSICWHIHQAP
Trigger: CGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCCTTCTGCCCCCAGCCTGCCTTGGTGCTCTTGGAGATCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp CCTGTGTGTCCCTGTGCCGCAGGCTATGAGAGGATCGATTTCCACTaGCAGCTGGTATGGCTGGTCTTGTACAGCACCTTGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: PVCPCAAGYERIDFH*QLVWLVLYSTLVSR
Trigger: CCTGCTCACCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGCCTGCGGCACAGGGACACACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CCA 90 bp TTGTCGGAAGTGATGACGAAGCACTGGGAGTGCACTTGGATGCTCTaGTCCAGGAGGTCTGTTACCTGCCTCCTGTGTGTCCCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: LSEVMTKHWECTWML*SRRSVTCLLCVPVP
Trigger: CGGCACAGGGACACACAGGAGGCAGGTAACAGACCTCCTGGACCAGAGCATCCAAGTGCACTCCCAGTGCTTCGTCATCACTTCCGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCAGAAAGCATCCATTCTaGCCACACAGAGCACTGCAG +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFRKHPF*PHRALQ
Trigger: CTGCAGTGCTCTGTGTGGCAAGAATGGATGCTTTCT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGACATCTTGCTGGGCTaGGTCTGTGAACATCAATGG +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFDILLG*VCEHQW
Trigger: CCATTGATGTTCACAGACCAAGCCCAGCAAGATGTC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGGGAAGGTTGTGCCACTaGTTCACGGCAAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: YLVASDLETGLWASGHGEGRLCH*FTAKSL
Trigger: CAGGCTCTTTGCCGTGAACAAGTGGCACAACCTTCC...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGCTGGTATGGCTGGTCTaGTACAGCACCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: YLVASDLETGLWASGHGELVWLV*YSTLVS
Trigger: GCTCACCAAGGTGCTGTACAAGACCAGCCATACCAG...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGACCACAGAAGAAGAGTaGCGTCACGTGACCCCGAGA +
Preference number: 5 (lower is better)
Translates to: YLVASDLETGLWASGHGETTEEE*RHVTPR
Trigger: TCTCGGGGTCACGTGACGCAACTCTTCTTCTGTGGT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS TCA 90 bp GGAGGTCTGTTACCTGCCTCCTGTGTGTCCCTGTGCCGCAGGCTATaGGAGGATCGATTTCCACTGGCAGCTGGTATGGCTGGTCTTGTA +
Preference number: 5 (lower is better)
Translates to: GGLLPASCVSLCRRL*EDRFPLAAGMAGLV
Trigger: TACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGCCTGCGGCACAGGGACACACAGGAGGCAGGTAACAGACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 90 bp AAGGCAGGCTGGGGGCAGAAGGGCTGGATCCACTGTGACTCCATCTaGTGGCATATTCACCAAGCTCCGGAGAATGTCCTTCACGTTGAC +
Preference number: 5 (lower is better)
Translates to: KAGWGQKGWIHCDSI*WHIHQAPENVLHVD
Trigger: GTCAACGTGAAGGACATTCTCCGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCCTTCTGCCCCCAGCCTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp GTCAAAACTGCCTTTACATCCTGGAGCATGAGTGCGTGTGGCGAGTaGACGAAGATGGAGGGGTTGTCCTTGGGAGACGACTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: VKTAFTSWSMSACGE*TKMEGLSLGDDSRH
Trigger: GTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCATCTTCGTCCACTCGCCACACGCACTCATGCTCCAGGATGTAAAGGCAGTTTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp GGTTCTTCTCTGCCTTCAGAGGCAGCTACAGACAAACCCTCACCTTaGAGCTCTGTGGGCAGACCAGCTTCCTCAGTAGGGCTGCCTTCT +
Preference number: 5 (lower is better)
Translates to: GSSLPSEAATDKPSP*SSVGRPASSVGLPS
Trigger: AGAAGGCAGCCCTACTGAGGAAGCTGGTCTGCCCACAGAGCTCCAAGGTGAGGGTTTGTCTGTAGCTGCCTCTGAAGGCAGAGAAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp CTGGTCAAAAGAAAGGGCCATGGCCCGGATTCCAGCATCACAGCCTaGGTAGGCAAAGAGCTGCTTGAGGTCAGACACCTGCCGCACTAT +
Preference number: 5 (lower is better)
Translates to: LVKRKGHGPDSSITA*VGKELLEVRHLPHY
Trigger: ATAGTGCGGCAGGTGTCTGACCTCAAGCAGCTCTTTGCCTACCCAGGCTGTGATGCTGGAATCCGGGCCATGGCCCTTTCTTTTGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCGATCCCAGGAAGCATTaGTCAAAGGTATCACTGGTG +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFDPRKH*SKVSLV
Trigger: CACCAGTGATACCTTTGACAAATGCTTCCTGGGATC...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGTCTGTGGCCCGCGGGTaGTACGTGAAGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMSVARG*YVKAMA
Trigger: TGCCATTGCCTTCACGTACAACCCGCGGGCCACAGA...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAATGGAGGGGTTGTCCTaGGGAGACGACTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKMEGLS*GDDSRH
Trigger: GTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCAT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATACGCAGCCCATTCCTTaGGTCAAAAGCCGGAATCAT +
Preference number: 5 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHTQPIP*VKSRNH
Trigger: ATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCGT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGTGTCTACTGGGCTCTTaGCTGCAGATTTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKCLLGS*LQISPW
Trigger: CCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGACA...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCAGCCAAAGCCAAGAATaGAGCTTGCTTGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGSQSQE*SLLAVL
Trigger: GAGGACAGCAAGCAAGCTCAATTCTTGGCTTTGGCT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGACTGTGTCTTTCATCTaGGGGTTCCAAAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGTVSFI*GFQNVS
Trigger: AGAGACATTTTGGAACCCCAAGATGAAAGACACAGT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGTCAATTTTCTTGAAGTaGGGATCCTCTTCATCCACC +
Preference number: 5 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGSIFLK*GSSSST
Trigger: GGTGGATGAAGAGGATCCCAACTTCAAGAAAATTGA...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GACTGTGGGCCAGTGGACATGGGGAGTGGCCCACCTGGCTCTGGCTTAGCAGGGAAGAATGCTGCTCGTTaGGGATTCAAAGCTCCTATT +
Preference number: 5 (lower is better)
Translates to: DCGPVDMGSGPPGSGLAGKNAAR*GFKAPI
Trigger: AATAGGAGCTTTGAATCCCAAACGAGCAGCATTCTT...CCCTGCTAAGCCAGAGCCAGGTGGGCCACTCCCCATGTCCACTGGCCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCAATTCTTCCGAGGTTTaGGCCCAAGGAGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFNSSEV*AQGGSS
Trigger: TGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS GCA 90 bp AGCCAGAGGCTGTTTCCTCACCAAGGCCTGAGTCCCTCCTGCGAGTaGATGAGGTGCCTTCCAATGATTCTTCCACCGACGACAGAGTTA +
Preference number: 5 (lower is better)
Translates to: SQRLFPHQGLSPSCE*MRCLPMILPPTTEL
Trigger: TAACTCTGTCGTCGGTGGAAGAATCATTGGAAGGCACCTCATGCACTCGCAGGAGGGACTCAGGCCTTGGTGAGGAAACAGCCTCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp TTCCTAAGCCAGAGGCTGTTTCCTCACCAAGGCCTGAGTCCCTCCTaGGAGTGCATGAGGTGCCTTCCAATGATTCTTCCACCGACGACA +
Preference number: 5 (lower is better)
Translates to: FLSQRLFPHQGLSPS*ECMRCLPMILPPTT
Trigger: TGTCGTCGGTGGAAGAATCATTGGAAGGCACCTCATGCACTCGCAGGAGGGACTCAGGCCTTGGTGAGGAAACAGCCTCTGGCTTAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp GCAGGCTGGGGGCAGAAGGGCTGGATCCACTGTGACTCCATCTGCTaGCATATTCACCAAGCTCCGGAGAATGTCCTTCACGTTGACATT +
Preference number: 5 (lower is better)
Translates to: AGWGQKGWIHCDSIC*HIHQAPENVLHVDI
Trigger: AATGTCAACGTGAAGGACATTCTCCGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCCTTCTGCCCCCAGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp TTAGGAGATCTACTTCCTGGTGACTCTCCTCCGGTGTCTGAGGCGTaGGTGGGATCTACTGAAGACACCACACTGACGGCGCTACTAGGT +
Preference number: 5 (lower is better)
Translates to: LGDLLPGDSPPVSEA*VGSTEDTTLTALLG
Trigger: ACCTAGTAGCGCCGTCAGTGTGGTGTCTTCAGTAGATCCCACCCACGCCTCAGACACCGGAGGAGAGTCACCAGGAAGTAGATCTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp TGTGCCGCAGGCTATGAGAGGATCGATTTCCACTGGCAGCTGGTATaGCTGGTCTTGTACAGCACCTTGGTGAGCAGGAAGGTTGTGCCA +
Preference number: 5 (lower is better)
Translates to: CAAGYERIDFHWQLV*LVLYSTLVSRKVVP
Trigger: TGGCACAACCTTCCTGCTCACCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGCCTGCGGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCTCTTTCCTGGAAAGTaGAAAAAGGCGTCAGGACCG +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKLFPGK*KKASGP
Trigger: CGGTCCTGACGCCTTTTTCAACTTTCCAGGAAAGAG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATATCAGTGAGCAGACGTaGATGCATCTGAGACCACTT +
Preference number: 5 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHISEQT*MHLRPL
Trigger: AAGTGGTCTCAGATGCATCAACGTCTGCTCACTGAT...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCATTAATGTCCATGTCTaGCAGGAGCCTGTCAAGATC +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPINVHV*QEPVKI
Trigger: GATCTTGACAGGCTCCTGCAAGACATGGACATTAAT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAGCCAAGAATTGAGCTaGCTTGCTGTCCTCGATGTC +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKSQELS*LAVLDV
Trigger: GACATCGAGGACAGCAAGCAAGCTCAATTCTTGGCT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCCTCCAGAGCTGTATTTaGCAAAAGATAACGGCGAGA +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFLQSCI*QKITAR
Trigger: TCTCGCCGTTATCTTTTGCAAAATACAGCTCTGGAG...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS TCA 90 bp AGGAGAGATGGGAGAATCCTTCCGATCTTCGTGCTGGGACCCCACTaGAACATCAACACCCCTAGTAGCACCAGTGCCTTCTGGAACCAG +
Preference number: 5 (lower is better)
Translates to: RRDGRILPIFVLGPH*NINTPSSTSAFWNQ
Trigger: CTGGTTCCAGAAGGCACTGGTGCTACTAGGGGTGTTGATGTTTCAGTGGGGTCCCAGCACGAAGATCGGAAGGATTCTCCCATCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATGCTCCAGACTTCTGCTaGGCAAGTGACATCACACTT +
Preference number: 5 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHAPDFC*ASDITL
Trigger: AAGTGTGATGTCACTTGCCAAGCAGAAGTCTGGAGC...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATGCAGGGTCTGGGAAGTaGAACATTACAGCAACTCTG +
Preference number: 5 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHAGSGK*NITATL
Trigger: CAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTGC...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GGCCTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATTCAAGTACTCGAAGTTaGAAATCTCTCTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: GLGQAVVLKRLRAQERSHSSTRS*KSLCAA
Trigger: GGCAGCACAGAGAGATTTCAAACTTCGAGTACTTGA...ATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCGCCCTGCTATTGTGTaGAGAAACATCAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKRPAIV*RNIKYS
Trigger: CGAGTACTTGATGTTTCTCAACACAATAGCAGGGCG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGGGCTCTATGAGCAGTaGCGAAGGCGTCTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKGLYEQ*RRRLSK
Trigger: TTTGGACAGACGCCTTCGCAACTGCTCATAGAGCCC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGGCTCTATGAGCAGTaGCGAAGGCGTCTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKGLYEQ*RRRLSK
Trigger: TTTGGACAGACGCCTTCGCAACTGCTCATAGAGCCC...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGGGAAGGTTGTGCCACTaGTTCACGGCAAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEGRLCH*FTAKSL
Trigger: CAGGCTCTTTGCCGTGAACAAGTGGCACAACCTTCC...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCATGGCCAAACACCACTaGGATCAATTTTCCTGTATC +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPMAKHH*DQFSCI
Trigger: GATACAGGAAAATTGATCCAAGTGGTGTTTGGCCAT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGATTAATGTCCATGTCTaGCAGGAGCCTGTCAAGATC +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKINVHV*QEPVKI
Trigger: GATCTTGACAGGCTCCTGCAAGACATGGACATTAAT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGTCAAGTACTCGAAGTTaGAAATCTCTCTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKSSTRS*KSLCAA
Trigger: GGCAGCACAGAGAGATTTCAAACTTCGAGTACTTGA...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATCGCCCTGCTATTGTGTaGAGAAACATCAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHRPAIV*RNIKYS
Trigger: CGAGTACTTGATGTTTCTCAACACAATAGCAGGGCG...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCAAAGCTCCTATTGGCTaGGACAAATCTCTGAAATTG +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPKAPIG*DKSLKL
Trigger: CAATTTCAGAGATTTGTCCAAGCCAATAGGAGCTTT...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CTGCCCCTCTGGCATGGGACGGAGGCCCCAGCTAGTTCAGACTTAGGCTGCTTCACGCAAGAACAAAACTaGCAGTTGAGTAATGAGTAC +
Preference number: 5 (lower is better)
Translates to: LPLWHGTEAPASSDLGCFTQEQN*QLSNEY
Trigger: GTACTCATTACTCAACTGCAAGTTTTGTTCTTGCGT...GAAGCAGCCTAAGTCTGAACTAGCTGGGGCCTCCGTCCCATGCCAGAGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCAATAAGATCAATCCATaGGTGAAGCTGGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGNKINP*VKLAGN
Trigger: GTTTCCTGCCAGCTTCACCAATGGATTGATCTTATT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS CCA 90 bp ATCCCTCCATCCAGCATCTCATGGCTGTCTGACTGTACAGTTGCCTaGGGAACAGGAACTTCTGATGAGGTAGCTAAAGACCCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: IPPSSISWLSDCTVA*GTGTSDEVAKDPAV
Trigger: CACAGCAGGGTCTTTAGCTACCTCATCAGAAGTTCCTGTTCCCCAGGCAACTGTACAGTCAGACAGCCATGAGATGCTGGATGGAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp TGTTGCAATGATGACACTTCTGTCAAAGGATCTGAACTGCATGGGTaGGTCAACAGACAGATCTCCAAGAGCACCAAGGCAGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: CCNDDTSVKGSELHG*VNRQISKSTKAGWG
Trigger: CCCCCAGCCTGCCTTGGTGCTCTTGGAGATCTGTCTGTTGACCCACCCATGCAGTTCAGATCCTTTGACAGAAGTGTCATCATTGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp GAATTCGAAGGGAACTTTAGGACCATGATGACATCTTGCTGGGCTTaGTCTGTGAACATCAATGGACTCGCCTGCATGGCCGAACCTCGG +
Preference number: 5 (lower is better)
Translates to: EFEGNFRTMMTSCWA*SVNINGLACMAEPR
Trigger: CCGAGGTTCGGCCATGCAGGCGAGTCCATTGATGTTCACAGACCAAGCCCAGCAAGATGTCATCATGGTCCTAAAGTTCCCTTCGAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGAGCGTGAGGAGGCCATaGTCCTTTATCTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: IGVRWVLLTQYLVASDLESVRRP*SFISLK
Trigger: CTTCAAGGAGATAAAGGACAATGGCCTCCTCACGCT...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCGATTGCTCAAATACTTaGAAAACGCAAGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPDCSNT*KTQGKV
Trigger: AACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAATC...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCGGTCCATCTAATCCTTaGGGGGTGATACCACTTCGG +
Preference number: 5 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSGPSNP*GVIPLR
Trigger: CCGAAGTGGTATCACCCCCAAAGGATTAGATGGACC...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGACGCAGCCCATTCCTTaGGTCAAAAGCCGGAATCAT +
Preference number: 5 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMTQPIP*VKSRNH
Trigger: ATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCGT...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGCTTCAGCTTTTCTCTTaGGCGCCAGATGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKLQLFS*APDALK
Trigger: TTTTAAAGCATCTGGCGCCAAAGAGAAAAGCTGAAG...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCCATATTGTCCATCACTaGAGAGATGAGATGAATTGT +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPHIVHH*RDEMNC
Trigger: ACAATTCATCTCATCTCTCAAGTGATGGACAATATG...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAAGCCAAAGCCAAGAATaGAGCTTGCTTGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKSQSQE*SLLAVL
Trigger: GAGGACAGCAAGCAAGCTCAATTCTTGGCTTTGGCT...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCAAATGTCTCTGTACTTaGAGACCATCAGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGKCLCT*RPSEQR
Trigger: TCTCTGTTCTGATGGTCTCAAAGTACAGAGACATTT...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCCCCCAGGCTCCATGCTaGTCTGTGAGGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLPQAPC*SVRRLI
Trigger: TATCAACCTCCTCACAGACAAGCATGGAGCCTGGGG...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAAGAATGCTGCTCGTTaGGGATTCAAAGCTCCTATT +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKKNAAR*GFKAPI
Trigger: AATAGGAGCTTTGAATCCCAAACGAGCAGCATTCTT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGTGGCCCGAACAAAACTTGCAGTaGAGTAATGAGTACCATAGT +
Preference number: 5 (lower is better)
Translates to: VASDLETGLWASGHGEWPEQNLQ*SNEYHS
Trigger: ACTATGGTACTCATTACTCAACTGCAAGTTTTGTTC...GGGCCACTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TACCTGGTCGCCTCTGATCTTGAGACAGGACTGTGGGCCAGTGGACATGGGGAGAATAAGATCAATCCATaGGTGAAGCTGGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: YLVASDLETGLWASGHGENKINP*VKLAGN
Trigger: GTTTCCTGCCAGCTTCACCAATGGATTGATCTTATT...CTCCCCATGTCCACTGGCCCACAGTCCTGTCTCAAGATCAGAGGCGACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGACATCTTGCTGGGCTaGGTCTGTGAACATCAATGG +
Preference number: 5 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKDILLG*VCEHQW
Trigger: CCATTGATGTTCACAGACCAAGCCCAGCAAGATGTC...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGATGGCCAAACACCACTaGGATCAATTTTCCTGTATC +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKMAKHH*DQFSCI
Trigger: GATACAGGAAAATTGATCCAAGTGGTGTTTGGCCAT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAACCACAGAAGAAGAGTaGCGTCACGTGACCCCGAGA +
Preference number: 5 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRTTEEE*RHVTPR
Trigger: TCTCGGGGTCACGTGACGCAACTCTTCTTCTGTGGT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS TCA 90 bp AACATCAACACCCCTAGTAGCACCAGTGCCTTCTGGAACCAGGCTTaGAGAACACGGTCCTGTTTCTTCATCACCTTTCCGCTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NINTPSSTSAFWNQA*RTRSCFFITFPLLF
Trigger: GAAGAGCAGCGGAAAGGTGATGAAGAAACAGGACCGTGTTCTTCAAGCCTGGTTCCAGAAGGCACTGGTGCTACTAGGGGTGTTGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 90 bp GCTGCTCTTCCCATTCCAGTACCACAGAAGAAGAGTTGCGTCACGTaGCCCCGAGAGGATGTAACAATTTCCCCCTATGTACGACTCAGA +
Preference number: 5 (lower is better)
Translates to: AALPIPVPQKKSCVT*PREDVTISPYVRLR
Trigger: TCTGAGTCGTACATAGGGGGAAATTGTTACATCCTCTCGGGGTCACGTGACGCAACTCTTCTTCTGTGGTACTGGAATGGGAAGAGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 90 bp AGCTGGGCGAAGAGCGGAAACAGAACTTGTACTCCTCCTATGGAGTaGATGGCGCTCTGGATGGAATGTGTCAAAACTGCCTTTACATCC +
Preference number: 5 (lower is better)
Translates to: SWAKSGNRTCTPPME*MALWMECVKTAFTS
Trigger: GGATGTAAAGGCAGTTTTGACACATTCCATCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAGTTCTGTTTCCGCTCTTCGCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp CGCAGCCCATTCCTTTGGTCAAAAGCCGGAATCATGGAGTTAGGATaGTCCGCCATCAACGCAACAAGCAGCTGTAGGACATCCATTAGA +
Preference number: 5 (lower is better)
Translates to: RSPFLWSKAGIMELG*SAINATSSCRTSIR
Trigger: TCTAATGGATGTCCTACAGCTGCTTGTTGCGTTGATGGCGGAGCATCCTAACTCCATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp CCACTTGAACTTCACAGCCATGACCACACATATCTGGTTCTTCTCTaGCTTCAGAGGCAGCTACAGACAAACCCTCACCTTGGAGCTCTG +
Preference number: 5 (lower is better)
Translates to: PLELHSHDHTYLVLL*LQRQLQTNPHLGAL
Trigger: CAGAGCTCCAAGGTGAGGGTTTGTCTGTAGCTGCCTCTGAAGGCAGAGAAGAACCAGATATGTGTGGTCATGGCTGTGAAGTTCAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp GGGCGAAGAGCGGAAACAGAACTTGTACTCCTCCTATGGAGTGCATaGCGCTCTGGATGGAATGTGTCAAAACTGCCTTTACATCCTGGA +
Preference number: 5 (lower is better)
Translates to: GRRAETELVLLLWSA*RSGWNVSKLPLHPG
Trigger: TCCAGGATGTAAAGGCAGTTTTGACACATTCCATCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAGTTCTGTTTCCGCTCTTCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp AGTCCAGCTGGGCGAAGAGCGGAAACAGAACTTGTACTCCTCCTATaGAGTGCATGGCGCTCTGGATGGAATGTGTCAAAACTGCCTTTA +
Preference number: 5 (lower is better)
Translates to: SPAGRRAETELVLLL*SAWRSGWNVSKLPL
Trigger: TAAAGGCAGTTTTGACACATTCCATCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAGTTCTGTTTCCGCTCTTCGCCCAGCTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp TCTCCGGCAAGGTTAGTTGCTTTCATCCCTCCATCCAGCATCTCATaGCTGTCTGACTGTACAGTTGCCTGGGGAACAGGAACTTCTGAT +
Preference number: 5 (lower is better)
Translates to: SPARLVAFIPPSSIS*LSDCTVAWGTGTSD
Trigger: ATCAGAAGTTCCTGTTCCCCAGGCAACTGTACAGTCAGACAGCCATGAGATGCTGGATGGAGGGATGAAAGCAACTAACCTTGCCGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCAGCGTGAGGAGGCCATaGTCCTTTATCTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSSVRRP*SFISLK
Trigger: CTTCAAGGAGATAAAGGACAATGGCCTCCTCACGCT...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGGATCCCAGGAAGCATTaGTCAAAGGTATCACTGGTG +
Preference number: 5 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKDPRKH*SKVSLV
Trigger: CACCAGTGATACCTTTGACAAATGCTTCCTGGGATC...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGCTGCTGACGTGGGATTaGGAAGACTTTTCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMLLTWD*EDFSRL
Trigger: TAGCCTTGAAAAGTCTTCCAAATCCCACGTCAGCAG...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCTCTGCACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCCATATTGTCCATCACTaGAGAGATGAGATGAATTGT +
Preference number: 5 (lower is better)
Translates to: FSAHGHSEGTSLQQGALGHIVHH*RDEMNC
Trigger: ACAATTCATCTCATCTCTCAAGTGATGGACAATATG...GCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTGCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGCGCCCTGCTATTGTGTaGAGAAACATCAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMRPAIV*RNIKYS
Trigger: CGAGTACTTGATGTTTCTCAACACAATAGCAGGGCG...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp CACACGGCCACAGTGAAGGCACTAGCCTGCAGCAAGGTGCTCTGGGCTTCTAAGAAAGCTCCTATTGGCTaGGACAAATCTCTGAAATTG +
Preference number: 5 (lower is better)
Translates to: HTATVKALACSKVLWASKKAPIG*DKSLKL
Trigger: CAATTTCAGAGATTTGTCCAAGCCAATAGGAGCTTT...CTTAGAAGCCCAGAGCACCTTGCTGCAGGCTAGTGCCTTCACTGTGGCCGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CTCGGGCAGGCTGTAGTGCTTAAAAGGTTGCGAGCCCAAGAGCGGTCCCATCATTACCATAGTGGAACTTaGGAACTTGATCATCTTCCC +
Preference number: 5 (lower is better)
Translates to: LGQAVVLKRLRAQERSHHYHSGT*ELDHLP
Trigger: GGGAAGATGATCAAGTTCCAAAGTTCCACTATGGTA...ATGATGGGACCGCTCTTGGGCTCGCAACCTTTTAAGCACTACAGCCTGCCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCGTCTTGTACAGCACCTaGGTGAGCAGGAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLVLYST*VSRKVV
Trigger: CACAACCTTCCTGCTCACCAAGGTGCTGTACAAGAC...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGTCTTGTACAGCACCTaGGTGAGCAGGAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRVLYST*VSRKVV
Trigger: CACAACCTTCCTGCTCACCAAGGTGCTGTACAAGAC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAGCACTGGGAGTGCACTaGGATGCTCTGGTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: AISIEWCLKSFLAWAETGALGVH*DALVQE
Trigger: CTCCTGGACCAGAGCATCCAAGTGCACTCCCAGTGC...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS TCA 90 bp ACCTTGGCTGGAGTGTGGATCCATACAGCAGGGTTAAGAAGAATGTaGTCACACAGCTGTTTCAGGAGGGGCATCCCATTCTGCAGATTG +
Preference number: 5 (lower is better)
Translates to: TLAGVWIHTAGLRRM*SHSCFRRGIPFCRL
Trigger: CAATCTGCAGAATGGGATGCCCCTCCTGAAACAGCTGTGTGATCACATTCTTCTTAACCCTGCTGTATGGATCCACACTCCAGCCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp TCCCAGTGCCTTGAGTGCCTGCACTCGGATTCCTTCGCTCTTCGATaGCAGAAGTTTATAGATAACACGCAGCCCATTCCTTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: SQCLECLHSDSFALR*QKFIDNTQPIPLVK
Trigger: TTTGACCAAAGGAATGGGCTGCGTGTTATCTATAAACTTCTGGCATCGAAGAGCGAAGGAATCCGAGTGCAGGCACTCAAGGCACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp GCCTTGATATCTCAAGCCCATGTCGTTGAGGCTGTGGTGCTTCTGTaGTCGTACTGGCCTTCAATTCAAACCTCTCAGTATCTGAAGCCA +
Preference number: 5 (lower is better)
Translates to: ALISQAHVVEAVVLL*SYWPSIQTSQYLKP
Trigger: TGGCTTCAGATACTGAGAGGTTTGAATTGAAGGCCAGTACGAGCACAGAAGCACCACAGCCTCAACGACATGGGCTTGAGATATCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp TCCACAAAAATCTCTCGGAGCAGAGGAGCTGCCTTCTCCAGTGCATaGTCTAGCCTTTCTGTAATACTCATGTGTGCAGCTGGGTCTTGT +
Preference number: 5 (lower is better)
Translates to: STKISRSRGAAFSSA*SSLSVILMCAAGSC
Trigger: ACAAGACCCAGCTGCACACATGAGTATTACAGAAAGGCTAGAGCATGCACTGGAGAAGGCAGCTCCTCTGCTCCGAGAGATTTTTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp TCTTATCTCTGTGAACAGCCATTTTCCATGCAGACCTTCTGTATATaGCAAGATCTCAGAGTGCGCTGCGGCCTGAGCTGTACTTCGCTG +
Preference number: 5 (lower is better)
Translates to: SYLCEQPFSMQTFCI*QDLRVRCGLSCTSL
Trigger: CAGCGAAGTACAGCTCAGGCCGCAGCGCACTCTGAGATCTTGGCATATACAGAAGGTCTGCATGGAAAATGGCTGTTCACAGAGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195524.2
CDS CCA 90 bp TCTCCAGGGCCAGTCTGTTTATGCGAACGAATTCTTCCGAGGTTTTaGCCCAAGGAGGAAGTTCAACATCAGACACCACTGTCCCATCAT +
Preference number: 5 (lower is better)
Translates to: SPGPVCLCERILPRF*PKEEVQHQTPLSHH
Trigger: ATGATGGGACAGTGGTGTCTGATGTTGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATTCGTTCGCATAAACAGACTGGCCCTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGCTCCAGAGCTGTATTTaGCAAAAGATAACGGCGAGA +
Preference number: 5 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKLQSCI*QKITAR
Trigger: TCTCGCCGTTATCTTTTGCAAAATACAGCTCTGGAG...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAGCAGGGTCTGGGAAGTaGAACATTACAGCAACTCTG +
Preference number: 5 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRAGSGK*NITATL
Trigger: CAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTGC...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCGCAGGGTCTGGGAAGTaGAACATTACAGCAACTCTG +
Preference number: 5 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLAGSGK*NITATL
Trigger: CAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTGC...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GACACGCGTCCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGTCAAGTACTCGAAGTTaGAAATCTCTCTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: DTRPRPVQIRQTNEGELMSSTRS*KSLCAA
Trigger: GGCAGCACAGAGAGATTTCAAACTTCGAGTACTTGA...CATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGGACGCGTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS TCA 90 bp CTTGCCCTCCCAATACTTGAGTTCTCATCACTATTTCTAGTGAAATaGGGAGAGATGGGAGAATCCTTCCGATCTTCGTGCTGGGACCCC +
Preference number: 5 (lower is better)
Translates to: LALPILEFSSLFLVK*GEMGESFRSSCWDP
Trigger: GGGGTCCCAGCACGAAGATCGGAAGGATTCTCCCATCTCTCCTCATTTCACTAGAAATAGTGATGAGAACTCAAGTATTGGGAGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp CGGCGAGAAAAGATTGATCTTATCTCTGTGAACAGCCATTTTCCATaGAGACCTTCTGTATATGCCAAGATCTCAGAGTGCGCTGCGGCC +
Preference number: 5 (lower is better)
Translates to: RREKIDLISVNSHFP*RPSVYAKISECAAA
Trigger: GGCCGCAGCGCACTCTGAGATCTTGGCATATACAGAAGGTCTGCATGGAAAATGGCTGTTCACAGAGATAAGATCAATCTTTTCTCGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCCTGCTGACGTGGGATTaGGAAGACTTTTCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLLLTWD*EDFSRL
Trigger: TAGCCTTGAAAAGTCTTCCAAATCCCACGTCAGCAG...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGACTGCTGACGTGGGATTaGGAAGACTTTTCAAGGCTA +
Preference number: 5 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRLLTWD*EDFSRL
Trigger: TAGCCTTGAAAAGTCTTCCAAATCCCACGTCAGCAG...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CAAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAACTTCAGCTTTTCTCTTaGGCGCCAGATGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: QERSHHSTLCHEDGRSGKLQLFS*APDALK
Trigger: TTTTAAAGCATCTGGCGCCAAAGAGAAAAGCTGAAG...TTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp CAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCATAACGCACCTCGGAGTCCCTCCTTTGTaGGTCTACTGCATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: QQSSSITLHLHQFIITHLGVPPL*VYCIWC
Trigger: GCACCAGATGCAGTAGACCAACAAAGGAGGGACTCC...GAGGTGCGTTATGATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAATCAGTGAGCAGACGTaGATGCATCTGAGACCACTT +
Preference number: 5 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRISEQT*MHLRPL
Trigger: AAGTGGTCTCAGATGCATCAACGTCTGCTCACTGAT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCAAGCCAAGAATTGAGCTaGCTTGCTGTCCTCGATGTC +
Preference number: 5 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSSQELS*LAVLDV
Trigger: GACATCGAGGACAGCAAGCAAGCTCAATTCTTGGCT...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGGCAGGGTCTGGGAAGTaGAACATTACAGCAACTCTG +
Preference number: 5 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQAGSGK*NITATL
Trigger: CAGAGTTGCTGTAATGTTCAACTTCCCAGACCCTGC...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp AAGAGCGGTCCCATCATTCCACTCTCTGCCATGAGGACGGCAGATCAGGAAAAGAAGAATGCTGCTCGTTaGGGATTCAAAGCTCCTATT +
Preference number: 5 (lower is better)
Translates to: KSGPIIPLSAMRTADQEKKNAAR*GFKAPI
Trigger: AATAGGAGCTTTGAATCCCAAACGAGCAGCATTCTT...CTTTTCCTGATCTGCCGTCCTCATGGCAGAGAGTGGAATGATGGGACCGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCAATTCTTCCGAGGTTTaGGCCCAAGGAGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLNSSEV*AQGGSS
Trigger: TGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATT...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp CCTAGGCCTGTTCAAATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGGACATCTTGCTGGGCTaGGTCTGTGAACATCAATGG +
Preference number: 5 (lower is better)
Translates to: PRPVQIRQTNEGELMKYQDILLG*VCEHQW
Trigger: CCATTGATGTTCACAGACCAAGCCCAGCAAGATGTC...CTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAATTTGAACAGGCCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS TCA 90 bp CTGTTTCAGGAGGGGCATCCCATTCTGCAGATTGCTCAAATACTTTaGAAACGCAAGGCAAAGTTCAAGTACTGCTCTGCTGACGTGGGA +
Preference number: 5 (lower is better)
Translates to: LFQEGHPILQIAQIL*KRKAKFKYCSADVG
Trigger: TCCCACGTCAGCAGAGCAGTACTTGAACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAATCTGCAGAATGGGATGCCCCTCCTGAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 90 bp AGAAGTGGCAGGAGCCTCAGAGACATTATCAGCACAATCACTAACTaGCTCAGTTTCTCCGGCAAGGTTAGTTGCTTTCATCCCTCCATC +
Preference number: 5 (lower is better)
Translates to: RSGRSLRDIISTITN*LSFSGKVSCFHPSI
Trigger: GATGGAGGGATGAAAGCAACTAACCTTGCCGGAGAAACTGAGTCAGTTAGTGATTGTGCTGATAATGTCTCTGAGGCTCCTGCCACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp CAAGAATTGAGCTTGCTTGCTGTCCTCGATGTCTCTGAAAACAACTaGTCGAAGCCGATTAATGTCCATGTCTTGCAGGAGCCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: QELSLLAVLDVSENN*SKPINVHVLQEPVK
Trigger: CTTGACAGGCTCCTGCAAGACATGGACATTAATCGGCTTCGAGCAGTTGTTTTCAGAGACATCGAGGACAGCAAGCAAGCTCAATTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAAGGACATCCATTAGATaGTCGTCCTCATGCATAGTC +
Preference number: 5 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRRTSIR*SSSCIV
Trigger: GACTATGCATGAGGACGACAATCTAATGGATGTCCT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAATCTGGTGCTGTTCCTaGTGCTGTCTGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: AISIEWCLKSFLAWAETGIWCCS*CCLLLL
Trigger: CAACAGGAGCAGACAGCACAAGGAACAGCACCAGAT...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGAAAGCTCCTATTGGCTaGGACAAATCTCTGAAATTG +
Preference number: 5 (lower is better)
Translates to: IGVRWVLLTQYLVASDLEKAPIG*DKSLKL
Trigger: CAATTTCAGAGATTTGTCCAAGCCAATAGGAGCTTT...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATGTCTTGTACAGCACCTaGGTGAGCAGGAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYVLYST*VSRKVV
Trigger: CACAACCTTCCTGCTCACCAAGGTGCTGTACAAGAC...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS TCA 90 bp GTATTTCTTTCTGATTGGGTCTTGGTCCATCTAATCCTTTGGGGGTaGTACCACTTCGGTCCTGAGGATTCACTGCCCAGTAGTAGTACT +
Preference number: 5 (lower is better)
Translates to: VFLSDWVLVHLILWG*YHFGPEDSLPSSST
Trigger: AGTACTACTACTGGGCAGTGAATCCTCAGGACCGAAGTGGTATCACCCCCAAAGGATTAGATGGACCAAGACCCAATCAGAAAGAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp ATGTCTCTGAAAACAACTGCTCGAAGCCGATTAATGTCCATGTCTTaGAGGAGCCTGTCAAGATCTCTTACCGGAGATATACCACCAGTC +
Preference number: 5 (lower is better)
Translates to: MSLKTTARSRLMSMS*RSLSRSLTGDIPPV
Trigger: GACTGGTGGTATATCTCCGGTAAGAGATCTTGACAGGCTCCTGCAAGACATGGACATTAATCGGCTTCGAGCAGTTGTTTTCAGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp GATTTCTTTGTTGCAATGATGACACTTCTGTCAAAGGATCTGAACTaGATGGGTGGGTCAACAGACAGATCTCCAAGAGCACCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: DFFVAMMTLLSKDLN*MGGSTDRSPRAPRQ
Trigger: CTGCCTTGGTGCTCTTGGAGATCTGTCTGTTGACCCACCCATGCAGTTCAGATCCTTTGACAGAAGTGTCATCATTGCAACAAAGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp GAAAATGACAGGGACATCCTAGCTTATCCCCAAAGAGCACCCTGGCTCTCTTCCTCTACAATATCCCTATaGGACACTTCTCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: ENDRDILAYPQRAPWLSSSTISL*DTSPTS
Trigger: TGAAGTTGGAGAAGTGTCCAATAGGGATATTGTAGA...GGAAGAGAGCCAGGGTGCTCTTTGGGGATAAGCTAGGATGTCCCTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCAAGGACATCCATTAGATaGTCGTCCTCATGCATAGTC +
Preference number: 5 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSRTSIR*SSSCIV
Trigger: GACTATGCATGAGGACGACAATCTAATGGATGTCCT...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTACGCAGCCCATTCCTTaGGTCAAAAGCCGGAATCAT +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLTQPIP*VKSRNH
Trigger: ATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCGT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAAGCCAAGAATTGAGCTaGCTTGCTGTCCTCGATGTC +
Preference number: 5 (lower is better)
Translates to: AISIEWCLKSFLAWAETGSQELS*LAVLDV
Trigger: GACATCGAGGACAGCAAGCAAGCTCAATTCTTGGCT...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp ATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCTGATCTTGAGTTGTCTGTGAGGAGGTaGATAATTTTCTGGATTAAC +
Preference number: 5 (lower is better)
Translates to: IGVRWVLLTQYLVASDLELSVRR*IIFWIN
Trigger: GTTAATCCAGAAAATTATCAACCTCCTCACAGACAA...CTCAAGATCAGAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTACCCCAGGCTCCATGCTaGTCTGTGAGGAGGTTGATA +
Preference number: 5 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLPQAPC*SVRRLI
Trigger: TATCAACCTCCTCACAGACAAGCATGGAGCCTGGGG...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCAATAAGATCAATCCATaGGTGAAGCTGGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLNKINP*VKLAGN
Trigger: GTTTCCTGCCAGCTTCACCAATGGATTGATCTTATT...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCTAGGAAGGTTGTGCCACTaGTTCACGGCAAAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: FSLNKFNLQWQFIGCRTLGRLCH*FTAKSL
Trigger: CAGGCTCTTTGCCGTGAACAAGTGGCACAACCTTCC...TAGAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS GCA 90 bp TGTGATCACACAGCTGTTTCAGGAGGGGCATCCCATTCTGCAGATTaGTCAAATACTTTGAAAACGCAAGGCAAAGTTCAAGTACTGCTC +
Preference number: 5 (lower is better)
Translates to: CDHTAVSGGASHSAD*SNTLKTQGKVQVLL
Trigger: GAGCAGTACTTGAACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAATCTGCAGAATGGGATGCCCCTCCTGAAACAGCTGTGTGATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp GTGGAGTGGCTAATGAAATACGCCTGGTCTGAGGTAATCCAAAACTaGTTCCCACACCAACACGAGGTAGATAGTTCACCACTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: VEWLMKYAWSEVIQN*FPHQHEVDSSPLSL
Trigger: TAAAGAAAGTGGTGAACTATCTACCTCGTGTTGGTGTGGGAACCAGTTTTGGATTACCTCAGACCAGGCGTATTTCATTAGCCACTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ACAGCGACTCCGTGCTGCCGTTTCCAATGTGAAGAGAAAGCAGTTTTAGGCAGAAAGGTATCACTGGTGTaGACAAACCATGTTATCTCT +
Preference number: 5 (lower is better)
Translates to: TATPCCRFQCEEKAVLGRKVSLV*TNHVIS
Trigger: AGAGATAACATGGTTTGTCAACACCAGTGATACCTT...TCTGCCTAAAACTGCTTTCTCTTCACATTGGAAACGGCAGCACGGAGTCGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTTCTGTGGCCCGCGGGTaGTACGTGAAGGCAATGGCA +
Preference number: 5 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTSVARG*YVKAMA
Trigger: TGCCATTGCCTTCACGTACAACCCGCGGGCCACAGA...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATATGGAGGGGTTGTCCTaGGGAGACGACTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: DSTSCAFSITHYYSIHINMEGLS*GDDSRH
Trigger: GTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCAT...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTCAGAAAGCATCCATTCTaGCCACACAGAGCACTGCAG +
Preference number: 5 (lower is better)
Translates to: SSPSTNLTSNGNLLAAGLRKHPF*PHRALQ
Trigger: CTGCAGTGCTCTGTGTGGCAAGAATGGATGCTTTCT...GAGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCAACTGTGTCTTTCATCTaGGGGTTCCAAAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSTVSFI*GFQNVS
Trigger: AGAGACATTTTGGAACCCCAAGATGAAAGACACAGT...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGACGCCCTGCTATTGTGTaGAGAAACATCAAGTACTCG +
Preference number: 5 (lower is better)
Translates to: AISIEWCLKSFLAWAETGRPAIV*RNIKYS
Trigger: CGAGTACTTGATGTTTCTCAACACAATAGCAGGGCG...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAACCCTCTCTCGATGCTaGGATGAGTTTTGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: AISIEWCLKSFLAWAETGTLSRC*DEFWFQ
Trigger: CTGAAACCAAAACTCATCCAAGCATCGAGAGAGGGT...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTACCCTCTCTCGATGCTaGGATGAGTTTTGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLTLSRC*DEFWFQ
Trigger: CTGAAACCAAAACTCATCCAAGCATCGAGAGAGGGT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS TCA 90 bp TACCAAAAAGCCCTTACAAGCAAGCATCTGCTCCTGCATAGCAATTaGGTTCTTCAGCAACTCCATGATAAAGGCCAGCAAGGTTGTACA +
Preference number: 5 (lower is better)
Translates to: YQKALTSKHLLLHSN*VLQQLHDKGQQGCT
Trigger: TGTACAACCTTGCTGGCCTTTATCATGGAGTTGCTGAAGAACTCAATTGCTATGCAGGAGCAGATGCTTGCTTGTAAGGGCTTTTTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 90 bp TTCATGCAGACCAGGCTTGTTCCTTCTATCAGCAGTTCTTGTCCATaGCTACCTAAAAGTGTCCGAGAAAGGAAAGGTGCAAAATCCACA +
Preference number: 5 (lower is better)
Translates to: FMQTRLVPSISSSCP*LPKSVRERKGAKST
Trigger: TGTGGATTTTGCACCTTTCCTTTCTCGGACACTTTTAGGTAGTCATGGACAAGAACTGCTGATAGAAGGAACAAGCCTGGTCTGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 90 bp TCAGTATCTGAAGCCACACTAGAAACATCCAGTTTGGTAATCTTCTaGTCAGAAGTGGCAGGAGCCTCAGAGACATTATCAGCACAATCA +
Preference number: 5 (lower is better)
Translates to: SVSEATLETSSLVIF*SEVAGASETLSAQS
Trigger: TGATTGTGCTGATAATGTCTCTGAGGCTCCTGCCACTTCTGAGCAGAAGATTACCAAACTGGATGTTTCTAGTGTGGCTTCAGATACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACGCTCCAGACTTCTGCTaGGCAAGTGACATCACACTT +
Preference number: 5 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHAPDFC*ASDITL
Trigger: AAGTGTGATGTCACTTGCCAAGCAGAAGTCTGGAGC...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATGGTCCATCTAATCCTTaGGGGGTGATACCACTTCGG +
Preference number: 5 (lower is better)
Translates to: MKISPAKQLHHITFAPIHGPSNP*GVIPLR
Trigger: CCGAAGTGGTATCACCCCCAAAGGATTAGATGGACC...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATATCTGGTGCTGTTCCTaGTGCTGTCTGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: MKISPAKQLHHITFAPIHIWCCS*CCLLLL
Trigger: CAACAGGAGCAGACAGCACAAGGAACAGCACCAGAT...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTTGTTTTCGAGCTCTTaGCTGTATCTCCTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLLFSSS*LYLLWL
Trigger: AAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACAA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGAGCCAAAGCCAAGAATaGAGCTTGCTTGCTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVSQSQE*SLLAVL
Trigger: GAGGACAGCAAGCAAGCTCAATTCTTGGCTTTGGCT...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCAAAAGCTCCTATTGGCTaGGACAAATCTCTGAAATTG +
Preference number: 5 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSKAPIG*DKSLKL
Trigger: CAATTTCAGAGATTTGTCCAAGCCAATAGGAGCTTT...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCATAACAAATAGGGGTAAGGTGGGTGCTGCTTACACAGTACCTGGTCGCCTCGAACAAAACTTGCAGTaGAGTAATGAGTACCATAGT +
Preference number: 5 (lower is better)
Translates to: FITNRGKVGAAYTVPGRLEQNLQ*SNEYHS
Trigger: ACTATGGTACTCATTACTCAACTGCAAGTTTTGTTC...GAGGCGACCAGGTACTGTGTAAGCAGCACCCACCTTACCCCTATTTGTTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACCTGGTATGGCTGGTCTaGTACAGCACCTTGGTGAGC +
Preference number: 5 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHLVWLV*YSTLVS
Trigger: GCTCACCAAGGTGCTGTACAAGACCAGCCATACCAG...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTACTATCACCACCCCGTaGTCTCCTCCTGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTTITTP*SPPVSR
Trigger: CCTGCTCACAGGAGGAGACAACGGGGTGGTGATAGT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATAGCGTGAGGAGGCCATaGTCCTTTATCTCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: MKISPAKQLHHITFAPIHSVRRP*SFISLK
Trigger: CTTCAAGGAGATAAAGGACAATGGCCTCCTCACGCT...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ATGAAAATTTCCCCAGCAAAGCAGCTCCATCACATTACATTTGCACCAATTCATCTCTTTCCTGGAAAGTaGAAAAAGGCGTCAGGACCG +
Preference number: 5 (lower is better)
Translates to: MKISPAKQLHHITFAPIHLFPGK*KKASGP
Trigger: CGGTCCTGACGCCTTTTTCAACTTTCCAGGAAAGAG...ATGAATTGGTGCAAATGTAATGTGATGGAGCTGCTTTGCTGGGGAAATTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGGTCCATCTAATCCTTaGGGGGTGATACCACTTCGG +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNGPSNP*GVIPLR
Trigger: CCGAAGTGGTATCACCCCCAAAGGATTAGATGGACC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp ATTAGGCAAACCAACGAGGGGGAGTTGATGAAATACCAGCATAGCCACAGCTCACATATTGTCCATCACTaGAGAGATGAGATGAATTGT +
Preference number: 5 (lower is better)
Translates to: IRQTNEGELMKYQHSHSSHIVHH*RDEMNC
Trigger: ACAATTCATCTCATCTCTCAAGTGATGGACAATATG...TGAGCTGTGGCTATGCTGGTATTTCATCAACTCCCCCTCGTTGGTTTGCCTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTGTCTACTGGGCTCTTaGCTGCAGATTTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNCLLGS*LQISPW
Trigger: CCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGACA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTACTGTGTCTTTCATCTaGGGGTTCCAAAATGTCTCT +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLTVSFI*GFQNVS
Trigger: AGAGACATTTTGGAACCCCAAGATGAAAGACACAGT...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTCAATTTTCTTGAAGTaGGGATCCTCTTCATCCACC +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLSIFLK*GSSSST
Trigger: GGTGGATGAAGAGGATCCCAACTTCAAGAAAATTGA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTACCATAGTGGAACTTaGGAACTTGATCATCTTCCC +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLYHSGT*ELDHLP
Trigger: GGGAAGATGATCAAGTTCCAAAGTTCCACTATGGTA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATGGGCTCTATGAGCAGTaGCGAAGGCGTCTGTCCAAA +
Preference number: 5 (lower is better)
Translates to: DSTSCAFSITHYYSIHINGLYEQ*RRRLSK
Trigger: TTTGGACAGACGCCTTCGCAACTGCTCATAGAGCCC...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATGTCTTGTACAGCACCTaGGTGAGCAGGAAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNVLYST*VSRKVV
Trigger: CACAACCTTCCTGCTCACCAAGGTGCTGTACAAGAC...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS TCA 90 bp GCTCCATGCTTGTCTGTGAGGAGGTTGATAATTTTCTGGATTAACTaGGTTGCGGTCACATGGTCTCGATATTTAGCTGCTCTTATCAAA +
Preference number: 5 (lower is better)
Translates to: APCLSVRRLIIFWIN*VAVTWSRYLAALIK
Trigger: TTTGATAAGAGCAGCTAAATATCGAGACCATGTGACCGCAACTCAGTTAATCCAGAAAATTATCAACCTCCTCACAGACAAGCATGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 90 bp ACTTATGGAAGCACTTACTTCACTGATGGTCACTGTATCTTTGCCTaGTTCCAAAGAATTAGAGTTAATAGTCACTGGCTCTGCTGCATC +
Preference number: 5 (lower is better)
Translates to: TYGSTYFTDGHCIFA*FQRIRVNSHWLCCI
Trigger: GATGCAGCAGAGCCAGTGACTATTAACTCTAATTCTTTGGAACCAGGCAAAGATACAGTGACCATCAGTGAAGTAAGTGCTTCCATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAAGATCCCAGGAAGCATTaGTCAAAGGTATCACTGGTG +
Preference number: 5 (lower is better)
Translates to: IITASILIFSDTRPRPVQDPRKH*SKVSLV
Trigger: CACCAGTGATACCTTTGACAAATGCTTCCTGGGATC...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAAATCAGTGAGCAGACGTaGATGCATCTGAGACCACTT +
Preference number: 5 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQISEQT*MHLRPL
Trigger: AAGTGGTCTCAGATGCATCAACGTCTGCTCACTGAT...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp GACAGTACTTCATGCGCATTCTCAATCACACATTATTACAGCATCCATATTAATTGTCTACTGGGCTCTTaGCTGCAGATTTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: DSTSCAFSITHYYSIHINCLLGS*LQISPW
Trigger: CCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGACA...ATTAATATGGATGCTGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACCTCCAGAGCTGTATTTaGCAAAAGATAACGGCGAGA +
Preference number: 5 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHLQSCI*QKITAR
Trigger: TCTCGCCGTTATCTTTTGCAAAATACAGCTCTGGAG...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTTGCACCAATTCATCATAACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGAACAAAACTTGCAGTaGAGTAATGAGTACCATAGT +
Preference number: 5 (lower is better)
Translates to: FAPIHHNAPRSCSSTSLSEQNLQ*SNEYHS
Trigger: ACTATGGTACTCATTACTCAACTGCAAGTTTTGTTC...ACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTTATGATGAATTGGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp GCTATTTCTATAGAGTGGTGTTTGAAGTCCTTCCTTGCTTGGGCTGAAACAGGAACGCAAGAACAAAACTaGCAGTTGAGTAATGAGTAC +
Preference number: 5 (lower is better)
Translates to: AISIEWCLKSFLAWAETGTQEQN*QLSNEY
Trigger: GTACTCATTACTCAACTGCAAGTTTTGTTCTTGCGT...TCCTGTTTCAGCCCAAGCAAGGAAGGACTTCAAACACCACTCTATAGAAATAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS GCA 90 bp TTTTCTCGCTCTACTTTCTTTTCATCACTAGACATATCATGTGTCTaGAGTTCAGTGTTGGATGCAGAATCTATTGAACTTGCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: FSRSTFFSSLDISCV*SSVLDAESIELALP
Trigger: TGGGAGGGCAAGTTCAATAGATTCTGCATCCAACACTGAACTGCAGACACATGATATGTCTAGTGATGAAAAGAAAGTAGAGCGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTCTCTTTCCTGGAAAGTaGAAAAAGGCGTCAGGACCG +
Preference number: 5 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTLFPGK*KKASGP
Trigger: CGGTCCTGACGCCTTTTTCAACTTTCCAGGAAAGAG...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTGATTGCTCAAATACTTaGAAAACGCAAGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLDCSNT*KTQGKV
Trigger: AACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAATC...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TCTCCTCTAACGATGAGACCCTGGCATTATAGTTTTATTTCTCACAACACAGTGCTTCAGCTTTTCTCTTaGGCGCCAGATGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: SPLTMRPWHYSFISHNTVLQLFS*APDALK
Trigger: TTTTAAAGCATCTGGCGCCAAAGAGAAAAGCTGAAG...CACTGTGTTGTGAGAAATAAAACTATAATGCCAGGGTCTCATCGTTAGAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAATTGTTTTCGAGCTCTTaGCTGTATCTCCTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: IITASILIFSDTRPRPVQLFSSS*LYLLWL
Trigger: AAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACAA...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp AACGCACCTCGCTCCTGCTCATCAACAAGTCTGAGTGATGAAAAGATCCAATATTTGTCTGTGAGGAGGTaGATAATTTTCTGGATTAAC +
Preference number: 5 (lower is better)
Translates to: NAPRSCSSTSLSDEKIQYLSVRR*IIFWIN
Trigger: GTTAATCCAGAAAATTATCAACCTCCTCACAGACAA...ATATTGGATCTTTTCATCACTCAGACTTGTTGATGAGCAGGAGCGAGGTGCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTTTGTCTGTGAGGAGGTaGATAATTTTCTGGATTAAC +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLLSVRR*IIFWIN
Trigger: GTTAATCCAGAAAATTATCAACCTCCTCACAGACAA...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACAAGAATGCTGCTCGTTaGGGATTCAAAGCTCCTATT +
Preference number: 5 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHKNAAR*GFKAPI
Trigger: AATAGGAGCTTTGAATCCCAAACGAGCAGCATTCTT...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCTCTGTGAAGCACTGGCTGTCTTGGAATTCTCTTTATAGACCAAGCTGGCTTGAACAAAACTTGCAGTaGAGTAATGAGTACCATAGT +
Preference number: 5 (lower is better)
Translates to: FSVKHWLSWNSLYRPSWLEQNLQ*SNEYHS
Trigger: ACTATGGTACTCATTACTCAACTGCAAGTTTTGTTC...AAGCCAGCTTGGTCTATAAAGAGAATTCCAAGACAGCCAGTGCTTCACAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194759.6
CDS-3UTR CAA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTGACATCTTGCTGGGCTaGGTCTGTGAACATCAATGG +
Preference number: 5 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTDILLG*VCEHQW
Trigger: CCATTGATGTTCACAGACCAAGCCCAGCAAGATGTC...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS TCA 90 bp ATCTCAAACAGAACATTATACATGGTCATTGTGATTAGATTTGTCTaGAGCATAAGTCTCTCAGCTAGCAGCGAGAACAATCCATGCCCA +
Preference number: 5 (lower is better)
Translates to: ISNRTLYMVIVIRFV*SISLSASSENNPCP
Trigger: TGGGCATGGATTGTTCTCGCTGCTAGCTGAGAGACTTATGCTTCAGACAAATCTAATCACAATGACCATGTATAATGTTCTGTTTGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 90 bp GGAAGTGATGCATTCCCATTATCACTACTAGTTTCCTTAAGAGACTaGCTGTGTCTTTCATCTTGGGGTTCCAAAATGTCTCTGTACTTT +
Preference number: 5 (lower is better)
Translates to: GSDAFPLSLLVSLRD*LCLSSWGSKMSLYF
Trigger: AAAGTACAGAGACATTTTGGAACCCCAAGATGAAAGACACAGTCAGTCTCTTAAGGAAACTAGTAGTGATAATGGGAATGCATCACTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS-3UTR CAA 90 bp CAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAACTGTAATCTACACAAGGTATCACTGGTGTaGACAAACCATGTTATCTCT +
Preference number: 5 (lower is better)
Translates to: QENSIPSNQQVKNNCNLHKVSLV*TNHVIS
Trigger: AGAGATAACATGGTTTGTCAACACCAGTGATACCTT...GTGTAGATTACAGTTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATAGGACATCCATTAGATaGTCGTCCTCATGCATAGTC +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNRTSIR*SSSCIV
Trigger: GACTATGCATGAGGACGACAATCTAATGGATGTCCT...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTTGTTTTCGAGCTCTTaGCTGTATCTCCTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNLFSSS*LYLLWL
Trigger: AAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACAA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTAATGTCCATGTCTaGCAGGAGCCTGTCAAGATC +
Preference number: 5 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHINVHV*QEPVKI
Trigger: GATCTTGACAGGCTCCTGCAAGACATGGACATTAAT...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTAAATGTCTCTGTACTTaGAGACCATCAGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTKCLCT*RPSEQR
Trigger: TCTCTGTTCTGATGGTCTCAAAGTACAGAGACATTT...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTCAAGTACTCGAAGTTaGAAATCTCTCTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNSSTRS*KSLCAA
Trigger: GGCAGCACAGAGAGATTTCAAACTTCGAGTACTTGA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp ATTATTACAGCATCCATATTAATTTTCAGTGACACGCGTCCTAGGCCTGTTCAATACCATAGTGGAACTTaGGAACTTGATCATCTTCCC +
Preference number: 5 (lower is better)
Translates to: IITASILIFSDTRPRPVQYHSGT*ELDHLP
Trigger: GGGAAGATGATCAAGTTCCAAAGTTCCACTATGGTA...TTGAACAGGCCTAGGACGCGTGTCACTGAAAATTAATATGGATGCTGTAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACAAATTCTTCCGAGGTTTaGGCCCAAGGAGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: SNIILTVLHAHSQSHIITNSSEV*AQGGSS
Trigger: TGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATT...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TTCTTCTCCCTCAACAAATTTAACCTCCAATGGCAATTTATTGGCTGCAGGACTGATTGCTCAAATACTTaGAAAACGCAAGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: FFSLNKFNLQWQFIGCRTDCSNT*KTQGKV
Trigger: AACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAATC...AGTCCTGCAGCCAATAAATTGCCATTGGAGGTTAAATTTGTTGAGGGAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTACCATAGTGGAACTTaGGAACTTGATCATCTTCCC +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNYHSGT*ELDHLP
Trigger: GGGAAGATGATCAAGTTCCAAAGTTCCACTATGGTA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp GCAAATGGTTTATCAGGAAAATTCCATTCCCAGCAACCAGCAAGTGAAAAACAAACGCAAGAACAAAACTaGCAGTTGAGTAATGAGTAC +
Preference number: 5 (lower is better)
Translates to: ANGLSGKFHSQQPASEKQTQEQN*QLSNEY
Trigger: GTACTCATTACTCAACTGCAAGTTTTGTTCTTGCGT...TTGTTTTTCACTTGCTGGTTGCTGGGAATGGAATTTTCCTGATAAACCATTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACAATAAGATCAATCCATaGGTGAAGCTGGCAGGAAAC +
Preference number: 5 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHNKINP*VKLAGN
Trigger: GTTTCCTGCCAGCTTCACCAATGGATTGATCTTATT...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATTCTACAATATCCCTATaGGACACTTCTCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNSTISL*DTSPTS
Trigger: TGAAGTTGGAGAAGTGTCCAATAGGGATATTGTAGA...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp ATGAAAAGATCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACTCTACAATATCCCTATaGGACACTTCTCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: MKRSNIILTVLHAHSQSHSTISL*DTSPTS
Trigger: TGAAGTTGGAGAAGTGTCCAATAGGGATATTGTAGA...GTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGATCTTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATAAGGTATCACTGGTGTaGACAAACCATGTTATCTCT +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNKVSLV*TNHVIS
Trigger: AGAGATAACATGGTTTGTCAACACCAGTGATACCTT...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS-3UTR CAA 90 bp TCCAATATTATCCTGACAGTACTTCATGCGCATTCTCAATCACACATTATTACATCAATTTTCTTGAAGTaGGGATCCTCTTCATCCACC +
Preference number: 5 (lower is better)
Translates to: SNIILTVLHAHSQSHIITSIFLK*GSSSST
Trigger: GGTGGATGAAGAGGATCCCAACTTCAAGAAAATTGA...TGTAATAATGTGTGATTGAGAATGCGCATGAAGTACTGTCAGGATAATATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS-3UTR CAA 90 bp TCACATGTAGCAAGAATTAGTGGGATTATTGGTTCCACTGTCTGTATCCATAATACGCAAGAACAAAACTaGCAGTTGAGTAATGAGTAC +
Preference number: 5 (lower is better)
Translates to: SHVARISGIIGSTVCIHNTQEQN*QLSNEY
Trigger: GTACTCATTACTCAACTGCAAGTTTTGTTCTTGCGT...ATTATGGATACAGACAGTGGAACCAATAATCCCACTAATTCTTGCTACATGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS-3UTR CAA 90 bp TTGGTTCCACTGTCTGTATCCATAATTGGTGAAAATAGACTTTTCATTAGGACTAAATGTCTCTGTACTTaGAGACCATCAGAACAGAGA +
Preference number: 5 (lower is better)
Translates to: LVPLSVSIIGENRLFIRTKCLCT*RPSEQR
Trigger: TCTCTGTTCTGATGGTCTCAAAGTACAGAGACATTT...AGTCCTAATGAAAAGTCTATTTTCACCAATTATGGATACAGACAGTGGAACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000107635.7
CDS TCA 90 bp AATTCTGAATATGGCGTACACCATCTCTGTTATCTTTTGCTCATCTaGATTCTTAGGATTAAAATAGCAGAGAGAAAGCATCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: NSEYGVHHLCYLLLI*ILRIKIAERKHPFL
Trigger: CAAGAATGGATGCTTTCTCTCTGCTATTTTAATCCTAAGAATTCAGATGAGCAAAAGATAACAGAGATGGTGTACGCCATATTCAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp AGCATGAGTGCGTGTGGCGAGTGGACGAAGATGGAGGGGTTGTCCTaGGGAGACGACTCCAGGCACAGCTGGGCATCTGTGGCCCGCGGG +
Preference number: 6 (lower is better)
Translates to: SMSACGEWTKMEGLS*GDDSRHSWASVARG
Trigger: CCCGCGGGCCACAGATGCCCAGCTGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCATCTTCGTCCACTCGCCACACGCACTCATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GAGGGGTTGTCCTTGGGAGACGACTCCAGGCACAGCTaGGCATCTGTGGCCCGCGGGTTGTACGTGAAGGCA +
Preference number: 6 (lower is better)
Translates to: EGLSLGDDSRHS*ASVARGLYVKA
Trigger: TGCCTTCACGTACAACCCGCGGGCCACAGATGCCCAGCTGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CGTGTGGCGAGTGGACGAAGATGGAGGGGTTGTCCTTaGGAGACGACTCCAGGCACAGCTGGGCATCTGTGG +
Preference number: 6 (lower is better)
Translates to: RVASGRRWRGCP*ETTPGTAGHLW
Trigger: CCACAGATGCCCAGCTGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCATCTTCGTCCACTCGCCACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp GCGTGTGGCGAGTGGACGAAGATGGAGGGGTTGTCCTaGGGAGACGACTCCAGGCACAGCTGGGCATCTGTG +
Preference number: 6 (lower is better)
Translates to: ACGEWTKMEGLS*GDDSRHSWASV
Trigger: CACAGATGCCCAGCTGTGCCTGGAGTCGTCTCCCAAGGACAACCCCTCCATCTTCGTCCACTCGCCACACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp GTGATGACAGCAGGCATTGCCAGGCCTGGCTGGGTGTaGGCCGCAACGTGGGTGACTGGAGAATTCGAAGGG +
Preference number: 6 (lower is better)
Translates to: VMTAGIARPGWV*AATWVTGEFEG
Trigger: CCCTTCGAATTCTCCAGTCACCCACGTTGCGGCCAACACCCAGCCAGGCCTGGCAATGCCTGCTGTCATCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 90 bp TTGGGAGACGACTCCAGGCACAGCTGGGCATCTGTGGCCCGCGGGTaGTACGTGAAGGCAATGGCACTGGACAGCTTGCCGTCATACAGT +
Preference number: 6 (lower is better)
Translates to: LGDDSRHSWASVARG*YVKAMALDSLPSYS
Trigger: ACTGTATGACGGCAAGCTGTCCAGTGCCATTGCCTTCACGTACAACCCGCGGGCCACAGATGCCCAGCTGTGCCTGGAGTCGTCTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp CAAGGCAGGCTGGGGGCAGAAGGGCTGGATCCACTGTaGCTCCATCTGCTGGCATATTCACCAAGCTCCGGA +
Preference number: 6 (lower is better)
Translates to: QGRLGAEGLDPL*LHLLAYSPSSG
Trigger: TCCGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCCTTCTGCCCCCAGCCTGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp CCTGCCGCACTATCACCACCCCGTTGTCTCCTCCTGTaGGCAGGTACTGCCCATCTCTGCTCAGCTGTATGG +
Preference number: 6 (lower is better)
Translates to: PAALSPPRCLLL*AGTAHLCSAVW
Trigger: CCATACAGCTGAGCAGAGATGGGCAGTACCTGCTCACAGGAGGAGACAACGGGGTGGTGATAGTGCGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS CAA 90 bp GCAGTGACAGTGATGACAGCAGGCATTGCCAGGCCTGGCTGGGTGTaGGCCGCAACGTGGGTGACTGGAGAATTCGAAGGGAACTTTAGG +
Preference number: 6 (lower is better)
Translates to: AVTVMTAGIARPGWV*AATWVTGEFEGNFR
Trigger: CCTAAAGTTCCCTTCGAATTCTCCAGTCACCCACGTTGCGGCCAACACCCAGCCAGGCCTGGCAATGCCTGCTGTCATCACTGTCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS TCA 72 bp TACTGCCCATCTCTGCTCAGCTGTATGGCCCTTATGTaGTCATCCGTCTCCACGGTGGCCTGCAGCTTCCCG +
Preference number: 6 (lower is better)
Translates to: YCPSLLSCMALM*SSVSTVACSFP
Trigger: CGGGAAGCTGCAGGCCACCGTGGAGACGGATGATCACATAAGGGCCATACAGCTGAGCAGAGATGGGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS GCA 72 bp TGCACTTGGATGCTCTGGTCCAGGAGGTCTGTTACCTaGCTCCTGTGTGTCCCTGTGCCGCAGGCTATGAGA +
Preference number: 6 (lower is better)
Translates to: CTWMLWSRRSVT*LLCVPVPQAMR
Trigger: TCTCATAGCCTGCGGCACAGGGACACACAGGAGGCAGGTAACAGACCTCCTGGACCAGAGCATCCAAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CCA 72 bp GCCTTTACATCCTGGAGCATGAGTGCGTGTGGCGAGTaGACGAAGATGGAGGGGTTGTCCTTGGGAGACGAC +
Preference number: 6 (lower is better)
Translates to: AFTSWSMSACGE*TKMEGLSLGDD
Trigger: GTCGTCTCCCAAGGACAACCCCTCCATCTTCGTCCACTCGCCACACGCACTCATGCTCCAGGATGTAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CTGCCTTCAGAGGCAGCTACAGACAAACCCTCACCTTaGAGCTCTGTGGGCAGACCAGCTTCCTCAGTAGGG +
Preference number: 6 (lower is better)
Translates to: LPSEAATDKPSP*SSVGRPASSVG
Trigger: CCCTACTGAGGAAGCTGGTCTGCCCACAGAGCTCCAAGGTGAGGGTTTGTCTGTAGCTGCCTCTGAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GATGACATCTTGCTGGGCTTGGTCTGTGAACATCAATaGACTCGCCTGCATGGCCGAACCTCGGGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: DDILLGLVCEHQ*TRLHGRTSGRV
Trigger: CACCCTCCCCGAGGTTCGGCCATGCAGGCGAGTCCATTGATGTTCACAGACCAAGCCCAGCAAGATGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CCA 72 bp AGAAAGGGCCATGGCCCGGATTCCAGCATCACAGCCTaGGTAGGCAAAGAGCTGCTTGAGGTCAGACACCTG +
Preference number: 6 (lower is better)
Translates to: RKGHGPDSSITA*VGKELLEVRHL
Trigger: CAGGTGTCTGACCTCAAGCAGCTCTTTGCCTACCCAGGCTGTGATGCTGGAATCCGGGCCATGGCCCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS CAA 72 bp TTGAGGTCAGACACCTGCCGCACTATCACCACCCCGTaGTCTCCTCCTGTGAGCAGGTACTGCCCATCTCTG +
Preference number: 6 (lower is better)
Translates to: LRSDTCRTITTP*SPPVSRYCPSL
Trigger: CAGAGATGGGCAGTACCTGCTCACAGGAGGAGACAACGGGGTGGTGATAGTGCGGCAGGTGTCTGACCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107635.7
ENSMUST00000195524.2
CDS CAA 90 bp TGGTTCTTCTCTGCCTTCAGAGGCAGCTACAGACAAACCCTCACCTaGGAGCTCTGTGGGCAGACCAGCTTCCTCAGTAGGGCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: WFFSAFRGSYRQTLT*ELCGQTSFLSRAAF
Trigger: GAAGGCAGCCCTACTGAGGAAGCTGGTCTGCCCACAGAGCTCCAAGGTGAGGGTTTGTCTGTAGCTGCCTCTGAAGGCAGAGAAGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TTACCTGCCTCCTGTGTGTCCCTGTGCCGCAGGCTATaGGAGGATCGATTTCCACTGGCAGCTGGTATGGCT +
Preference number: 6 (lower is better)
Translates to: LPASCVSLCRRL*EDRFPLAAGMA
Trigger: AGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGCCTGCGGCACAGGGACACACAGGAGGCAGGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 72 bp CAGACCTTCTGTATATGCCAAGATCTCAGAGTGCGCTaGGGCCTGAGCTGTACTTCGCTGCTCTCCGGGCAT +
Preference number: 6 (lower is better)
Translates to: QTFCICQDLRVR*GLSCTSLLSGH
Trigger: ATGCCCGGAGAGCAGCGAAGTACAGCTCAGGCCGCAGCGCACTCTGAGATCTTGGCATATACAGAAGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195524.2
CDS CCA 72 bp GCCTTTTACTACAACAGAGGGGGCCACAAGCTGAGCTaGGGTGCTCAGGCTAACAGGACCGGCAAGATTCTC +
Preference number: 6 (lower is better)
Translates to: AFYYNRGGHKLS*GAQANRTGKIL
Trigger: GAGAATCTTGCCGGTCCTGTTAGCCTGAGCACCCCAGCTCAGCTTGTGGCCCCCTCTGTTGTAGTAAAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CCCTGTGCCGCAGGCTATGAGAGGATCGATTTCCACTaGCAGCTGGTATGGCTGGTCTTGTACAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: PCAAGYERIDFH*QLVWLVLYSTL
Trigger: CAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGCCTGCGGCACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS TCA 72 bp GGGAGAATCCTTCCGATCTTCGTGCTGGGACCCCACTaGAACATCAACACCCCTAGTAGCACCAGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: GRILPIFVLGPH*NINTPSSTSAF
Trigger: GAAGGCACTGGTGCTACTAGGGGTGTTGATGTTTCAGTGGGGTCCCAGCACGAAGATCGGAAGGATTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp CACCAAGGCCTGAGTCCCTCCTGCGAGTGCATGAGGTaGCTTCCAATGATTCTTCCACCGACGACAGAGTTA +
Preference number: 6 (lower is better)
Translates to: HQGLSPSCECMR*LPMILPPTTEL
Trigger: TAACTCTGTCGTCGGTGGAAGAATCATTGGAAGGCACCTCATGCACTCGCAGGAGGGACTCAGGCCTTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp CAGAGGCTGTTTCCTCACCAAGGCCTGAGTCCCTCCTaGGAGTGCATGAGGTGCCTTCCAATGATTCTTCCA +
Preference number: 6 (lower is better)
Translates to: QRLFPHQGLSPS*ECMRCLPMILP
Trigger: TGGAAGAATCATTGGAAGGCACCTCATGCACTCGCAGGAGGGACTCAGGCCTTGGTGAGGAAACAGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp TGGGGGCAGAAGGGCTGGATCCACTGTGACTCCATCTaGTGGCATATTCACCAAGCTCCGGAGAATGTCCTT +
Preference number: 6 (lower is better)
Translates to: WGQKGWIHCDSI*WHIHQAPENVL
Trigger: AAGGACATTCTCCGGAGCTTGGTGAATATGCCAGCAGATGGAGTCACAGTGGATCCAGCCCTTCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CAAAACTGCCTTTACATCCTGGAGCATGAGTGCGTGTaGCGAGTGGACGAAGATGGAGGGGTTGTCCTTGGG +
Preference number: 6 (lower is better)
Translates to: QNCLYILEHECV*RVDEDGGVVLG
Trigger: CCCAAGGACAACCCCTCCATCTTCGTCCACTCGCCACACGCACTCATGCTCCAGGATGTAAAGGCAGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp TCTGTGGCCCGCGGGTTGTACGTGAAGGCAATGGCACTGGACAGCTaGCCGTCATACAGTAACAGTTTATGGTGCTCAGCGAGGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SVARGLYVKAMALDS*PSYSNSLWCSARKR
Trigger: CCTTTTCCTCGCTGAGCACCATAAACTGTTACTGTATGACGGCAAGCTGTCCAGTGCCATTGCCTTCACGTACAACCCGCGGGCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp AGCTGGGTCTTGTGGGACGGAGCCAACTGCTGCAACTaGGGGCAGTTTTGCATTAGGAGATCTACTTCCTGG +
Preference number: 6 (lower is better)
Translates to: SWVLWDGANCCN*GQFCIRRSTSW
Trigger: CCAGGAAGTAGATCTCCTAATGCAAAACTGCCCTCAGTTGCAGCAGTTGGCTCCGTCCCACAAGACCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp GGAGTGCATGGCGCTCTGGATGGAATGTGTCAAAACTaGCTTTACATCCTGGAGCATGAGTGCGTGTGGCGA +
Preference number: 6 (lower is better)
Translates to: GVHGALDGMCQN*LYILEHECVWR
Trigger: TCGCCACACGCACTCATGCTCCAGGATGTAAAGGCAGTTTTGACACATTCCATCCAGAGCGCCATGCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GGCTATGAGAGGATCGATTTCCACTGGCAGCTGGTATaGCTGGTCTTGTACAGCACCTTGGTGAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: GYERIDFHWQLV*LVLYSTLVSRK
Trigger: CTTCCTGCTCACCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 72 bp CGCGGGTTGTACGTGAAGGCAATGGCACTGGACAGCTaGCCGTCATACAGTAACAGTTTATGGTGCTCAGCG +
Preference number: 6 (lower is better)
Translates to: RGLYVKAMALDS*PSYSNSLWCSA
Trigger: CGCTGAGCACCATAAACTGTTACTGTATGACGGCAAGCTGTCCAGTGCCATTGCCTTCACGTACAACCCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp AGGATCGATTTCCACTGGCAGCTGGTATGGCTGGTCTaGTACAGCACCTTGGTGAGCAGGAAGGTTGTGCCA +
Preference number: 6 (lower is better)
Translates to: RIDFHWQLVWLV*YSTLVSRKVVP
Trigger: TGGCACAACCTTCCTGCTCACCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 90 bp GGCTATGAGAGGATCGATTTCCACTGGCAGCTGGTATGGCTGGTCTaGTACAGCACCTTGGTGAGCAGGAAGGTTGTGCCACTTGTTCAC +
Preference number: 6 (lower is better)
Translates to: GYERIDFHWQLVWLV*YSTLVSRKVVPLVH
Trigger: GTGAACAAGTGGCACAACCTTCCTGCTCACCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS TCA 72 bp TGGAATGTGTCAAAACTGCCTTTACATCCTGGAGCATaGGTGCGTGTGGCGAGTGGACGAAGATGGAGGGGT +
Preference number: 6 (lower is better)
Translates to: WNVSKLPLHPGA*VRVASGRRWRG
Trigger: ACCCCTCCATCTTCGTCCACTCGCCACACGCACTCATGCTCCAGGATGTAAAGGCAGTTTTGACACATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp AGCAGTTGCGAAGGCGTCTGTCCAAAACTTCGGATCTaGGCTTCCACAGCCTCTCTCAGCACAGGATCAGTT +
Preference number: 6 (lower is better)
Translates to: SSCEGVCPKLRI*ASTASLSTGSV
Trigger: AACTGATCCTGTGCTGAGAGAGGCTGTGGAAGCTCAGATCCGAAGTTTTGGACAGACGCCTTCGCAACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 72 bp TGGCAGTTTCACCGCCAGGGTTATCTCCAATCCCGCTaGTCTTCCCATTCCAGTACCACAGAAGAAGAGTTG +
Preference number: 6 (lower is better)
Translates to: WQFHRQGYLQSR*SSHSSTTEEEL
Trigger: CAACTCTTCTTCTGTGGTACTGGAATGGGAAGAGCAGCGGGATTGGAGATAACCCTGGCGGTGAAACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CCA 72 bp GGGAACTTTAGGACCATGATGACATCTTGCTGGGCTTaGTCTGTGAACATCAATGGACTCGCCTGCATGGCC +
Preference number: 6 (lower is better)
Translates to: GNFRTMMTSCWA*SVNINGLACMA
Trigger: GGCCATGCAGGCGAGTCCATTGATGTTCACAGACCAAGCCCAGCAAGATGTCATCATGGTCCTAAAGTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CCA 72 bp ACCTATGAGAGGATCGATTTCCACTGGCAGCTGGTATaGCTGGTCTTGTACAGCACCTTGGTGAGCAGGAAG +
Preference number: 6 (lower is better)
Translates to: TYERIDFHWQLV*LVLYSTLVSRK
Trigger: CTTCCTGCTCACCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS CAA 90 bp GAACTCAGGAATGCGAAACATGGTGGATCTGGAGTCCCTCCTTTGTaGGTCTACTGCATCTGGTGCTGTTCCTTGTGCTGTCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: ELRNAKHGGSGVPPL*VYCIWCCSLCCLLL
Trigger: CAGGAGCAGACAGCACAAGGAACAGCACCAGATGCAGTAGACCAACAAAGGAGGGACTCCAGATCCACCATGTTTCGCATTCCTGAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp CTCCAATCCCGCTGCTCTTCCCATTCCAGTACCACAGAAGAAGAGTaGCGTCACGTGACCCCGAGAGGATGTAACAATTTCCCCCTATGT +
Preference number: 6 (lower is better)
Translates to: LQSRCSSHSSTTEEE*RHVTPRGCNNFPLC
Trigger: ACATAGGGGGAAATTGTTACATCCTCTCGGGGTCACGTGACGCAACTCTTCTTCTGTGGTACTGGAATGGGAAGAGCAGCGGGATTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 90 bp ACCTATGAGAGGATCGATTTCCACTGGCAGCTGGTATGGCTGGTCTaGTACAGCACCTTGGTGAGCAGGAAGGTTGTGCCACTTGTTCAC +
Preference number: 6 (lower is better)
Translates to: TYERIDFHWQLVWLV*YSTLVSRKVVPLVH
Trigger: GTGAACAAGTGGCACAACCTTCCTGCTCACCAAGGTGCTGTACAAGACCAGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS CAA 90 bp CTTGAACTCAGGAATGCGAAACATGGTGGATCTGGAGTCCCTCCTTaGTTGGTCTACTGCATCTGGTGCTGTTCCTTGTGCTGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: LELRNAKHGGSGVPP*LVYCIWCCSLCCLL
Trigger: GAGCAGACAGCACAAGGAACAGCACCAGATGCAGTAGACCAACAAAGGAGGGACTCCAGATCCACCATGTTTCGCATTCCTGAGTTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp CTCTCCAGGGCCAGTCTGTTTATGCGAACGAATTCTTCCGAGGTTTaGGCCCAAGGAGGAAGTTCAACATCAGACACCACTGTCCCATCA +
Preference number: 6 (lower is better)
Translates to: LSRASLFMRTNSSEV*AQGGSSTSDTTVPS
Trigger: TGATGGGACAGTGGTGTCTGATGTTGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATTCGTTCGCATAAACAGACTGGCCCTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS TCA 72 bp TCTGATTGGGTCTTGGTCCATCTAATCCTTTGGGGGTaGTACCACTTCGGTCCTGAGGATTCACTGCCCAGT +
Preference number: 6 (lower is better)
Translates to: SDWVLVHLILWG*YHFGPEDSLPS
Trigger: ACTGGGCAGTGAATCCTCAGGACCGAAGTGGTATCACCCCCAAAGGATTAGATGGACCAAGACCCAATCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TTGGCGCCAGATGCTTTAAAAAGTATCCCAGTGCCTTaGGTGCCTGCACTCGGATTCCTTCGCTCTTCGATG +
Preference number: 6 (lower is better)
Translates to: LAPDALKSIPVP*VPALGFLRSSM
Trigger: CATCGAAGAGCGAAGGAATCCGAGTGCAGGCACTCAAGGCACTGGGATACTTTTTAAAGCATCTGGCGCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TGTGTCGCGCTGACTGTTTCGCCATGCTCTGGAGACTaGGGAGAACGTCCTATCTGCATGATCAAATTTCCC +
Preference number: 6 (lower is better)
Translates to: CVALTVSPCSGD*GERPICMIKFP
Trigger: GGGAAATTTGATCATGCAGATAGGACGTTCTCCTCAGTCTCCAGAGCATGGCGAAACAGTCAGCGCGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 72 bp TGGTCTACTGCATCTGGTGCTGTTCCTTGTGCTGTCTaGTCCTGTTGCCTTGATATCTCAAGCCCATGTCGT +
Preference number: 6 (lower is better)
Translates to: WSTASGAVPCAV*SCCLDISSPCR
Trigger: ACGACATGGGCTTGAGATATCAAGGCAACAGGAGCAGACAGCACAAGGAACAGCACCAGATGCAGTAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp TGTGAACAGCCATTTTCCATGCAGACCTTCTGTATATaGCAAGATCTCAGAGTGCGCTGCGGCCTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: CEQPFSMQTFCI*QDLRVRCGLSC
Trigger: ACAGCTCAGGCCGCAGCGCACTCTGAGATCTTGGCATATACAGAAGGTCTGCATGGAAAATGGCTGTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195524.2
CDS CCA 72 bp CTCTGGATGGAATGTGTCAAAACTGCCTTTACATCCTaGAGCATGAGTGCGTGTGGCGAGTGGACGAAGATG +
Preference number: 6 (lower is better)
Translates to: LWMECVKTAFTS*SMSACGEWTKM
Trigger: CATCTTCGTCCACTCGCCACACGCACTCATGCTCCAGGATGTAAAGGCAGTTTTGACACATTCCATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GGGCGAAGAGCGGAAACAGAACTTGTACTCCTCCTATaGAGTGCATGGCGCTCTGGATGGAATGTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: GRRAETELVLLL*SAWRSGWNVSK
Trigger: TTTTGACACATTCCATCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAGTTCTGTTTCCGCTCTTCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp AGGTTAGTTGCTTTCATCCCTCCATCCAGCATCTCATaGCTGTCTGACTGTACAGTTGCCTGGGGAACAGGA +
Preference number: 6 (lower is better)
Translates to: RLVAFIPPSSIS*LSDCTVAWGTG
Trigger: TCCTGTTCCCCAGGCAACTGTACAGTCAGACAGCCATGAGATGCTGGATGGAGGGATGAAAGCAACTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp ATGCGAAACATGGTGGATCTGGAGTCCCTCCTTTGTTaGTCTACTGCATCTGGTGCTGTTCCTTGTGCTGTC +
Preference number: 6 (lower is better)
Translates to: MRNMVDLESLLC*STASGAVPCAV
Trigger: GACAGCACAAGGAACAGCACCAGATGCAGTAGACCAACAAAGGAGGGACTCCAGATCCACCATGTTTCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp TGTCAGATGTGTCGCGCTGACTGTTTCGCCATGCTCTaGAGACTGAGGAGAACGTCCTATCTGCATGATCAA +
Preference number: 6 (lower is better)
Translates to: CQMCRADCFAML*RLRRTSYLHDQ
Trigger: TTGATCATGCAGATAGGACGTTCTCCTCAGTCTCCAGAGCATGGCGAAACAGTCAGCGCGACACATCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 72 bp AGGAATGCGAAACATGGTGGATCTGGAGTCCCTCCTTaGTTGGTCTACTGCATCTGGTGCTGTTCCTTGTGC +
Preference number: 6 (lower is better)
Translates to: RNAKHGGSGVPP*LVYCIWCCSLC
Trigger: GCACAAGGAACAGCACCAGATGCAGTAGACCAACAAAGGAGGGACTCCAGATCCACCATGTTTCGCATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp CGCTGCTCTTCCCATTCCAGTACCACAGAAGAAGAGTaGCGTCACGTGACCCCGAGAGGATGTAACAATTTC +
Preference number: 6 (lower is better)
Translates to: RCSSHSSTTEEE*RHVTPRGCNNF
Trigger: GAAATTGTTACATCCTCTCGGGGTCACGTGACGCAACTCTTCTTCTGTGGTACTGGAATGGGAAGAGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS TCA 72 bp CCTGGAAAGTTGAAAAAGGCGTCAGGACCGTACTTCTaGGGCATGTGCTTTAACACTGACAGCAGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: PGKLKKASGPYF*GMCFNTDSSFP
Trigger: TGGGAAGCTGCTGTCAGTGTTAAAGCACATGCCTCAGAAGTACGGTCCTGACGCCTTTTTCAACTTTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp GGAGTGTGGATCCATACAGCAGGGTTAAGAAGAATGTaGTCACACAGCTGTTTCAGGAGGGGCATCCCATTC +
Preference number: 6 (lower is better)
Translates to: GVWIHTAGLRRM*SHSCFRRGIPF
Trigger: GAATGGGATGCCCCTCCTGAAACAGCTGTGTGATCACATTCTTCTTAACCCTGCTGTATGGATCCACACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp CCCATTCCAGTACCACAGAAGAAGAGTTGCGTCACGTaGCCCCGAGAGGATGTAACAATTTCCCCCTATGTA +
Preference number: 6 (lower is better)
Translates to: PIPVPQKKSCVT*PREDVTISPYV
Trigger: TACATAGGGGGAAATTGTTACATCCTCTCGGGGTCACGTGACGCAACTCTTCTTCTGTGGTACTGGAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 72 bp AAGAGCGGAAACAGAACTTGTACTCCTCCTATGGAGTaGATGGCGCTCTGGATGGAATGTGTCAAAACTGCC +
Preference number: 6 (lower is better)
Translates to: KSGNRTCTPPME*MALWMECVKTA
Trigger: GGCAGTTTTGACACATTCCATCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAGTTCTGTTTCCGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp TTCCTTTGGTCAAAAGCCGGAATCATGGAGTTAGGATaGTCCGCCATCAACGCAACAAGCAGCTGTAGGACA +
Preference number: 6 (lower is better)
Translates to: FLWSKAGIMELG*SAINATSSCRT
Trigger: TGTCCTACAGCTGCTTGTTGCGTTGATGGCGGAGCATCCTAACTCCATGATTCCGGCTTTTGACCAAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp CTTGAGTGCCTGCACTCGGATTCCTTCGCTCTTCGATaGCAGAAGTTTATAGATAACACGCAGCCCATTCCT +
Preference number: 6 (lower is better)
Translates to: LECLHSDSFALR*QKFIDNTQPIP
Trigger: AGGAATGGGCTGCGTGTTATCTATAAACTTCTGGCATCGAAGAGCGAAGGAATCCGAGTGCAGGCACTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp AGCATAAGTCTCTCAGCTAGCAGCGAGAACAATCCATaGCCAAGCATGACTTCAGCTTTTCTCTTTGGCGCC +
Preference number: 6 (lower is better)
Translates to: SISLSASSENNP*PSMTSAFLFGA
Trigger: GGCGCCAAAGAGAAAAGCTGAAGTCATGCTTGGGCATGGATTGTTCTCGCTGCTAGCTGAGAGACTTATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp TACCCACACTCGCCAGCCACCCCACTCGTATTTGACTaGATGGTAAAGCAGAATTCTGAATATGGCGTACAC +
Preference number: 6 (lower is better)
Translates to: YPHSPATPLVFD*MVKQNSEYGVH
Trigger: GTGTACGCCATATTCAGAATTCTGCTTTACCATGCAGTCAAATACGAGTGGGGTGGCTGGCGAGTGTGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp CTTCACAGCCATGACCACACATATCTGGTTCTTCTCTaGCTTCAGAGGCAGCTACAGACAAACCCTCACCTT +
Preference number: 6 (lower is better)
Translates to: LHSHDHTYLVLL*LQRQLQTNPHL
Trigger: AAGGTGAGGGTTTGTCTGTAGCTGCCTCTGAAGGCAGAGAAGAACCAGATATGTGTGGTCATGGCTGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp TCTCAAGCCCATGTCGTTGAGGCTGTGGTGCTTCTGTaGTCGTACTGGCCTTCAATTCAAACCTCTCAGTAT +
Preference number: 6 (lower is better)
Translates to: SQAHVVEAVVLL*SYWPSIQTSQY
Trigger: ATACTGAGAGGTTTGAATTGAAGGCCAGTACGAGCACAGAAGCACCACAGCCTCAACGACATGGGCTTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp TCCAGCATCTCATGGCTGTCTGACTGTACAGTTGCCTaGGGAACAGGAACTTCTGATGAGGTAGCTAAAGAC +
Preference number: 6 (lower is better)
Translates to: SSISWLSDCTVA*GTGTSDEVAKD
Trigger: GTCTTTAGCTACCTCATCAGAAGTTCCTGTTCCCCAGGCAACTGTACAGTCAGACAGCCATGAGATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CATGTCGTTGAGGCTGTGGTGCTTCTGTGCTCGTACTaGCCTTCAATTCAAACCTCTCAGTATCTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: HVVEAVVLLCSY*PSIQTSQYLKP
Trigger: TGGCTTCAGATACTGAGAGGTTTGAATTGAAGGCCAGTACGAGCACAGAAGCACCACAGCCTCAACGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GATGACACTTCTGTCAAAGGATCTGAACTGCATGGGTaGGTCAACAGACAGATCTCCAAGAGCACCAAGGCA +
Preference number: 6 (lower is better)
Translates to: DDTSVKGSELHG*VNRQISKSTKA
Trigger: TGCCTTGGTGCTCTTGGAGATCTGTCTGTTGACCCACCCATGCAGTTCAGATCCTTTGACAGAAGTGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp TTTGGCGCCAGATGCTTTAAAAAGTATCCCAGTGCCTaGAGTGCCTGCACTCGGATTCCTTCGCTCTTCGAT +
Preference number: 6 (lower is better)
Translates to: FGARCFKKYPSA*SACTRIPSLFD
Trigger: ATCGAAGAGCGAAGGAATCCGAGTGCAGGCACTCAAGGCACTGGGATACTTTTTAAAGCATCTGGCGCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp AATGCGAAACATGGTGGATCTGGAGTCCCTCCTTTGTaGGTCTACTGCATCTGGTGCTGTTCCTTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: NAKHGGSGVPPL*VYCIWCCSLCC
Trigger: ACAGCACAAGGAACAGCACCAGATGCAGTAGACCAACAAAGGAGGGACTCCAGATCCACCATGTTTCGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp GGACGACTTACTGCAGAGCTCCCCCAGGCTCCATGCTaGTCTGTGAGGAGGTTGATAATTTTCTGGATTAAC +
Preference number: 6 (lower is better)
Translates to: GRLTAELPQAPC*SVRRLIIFWIN
Trigger: GTTAATCCAGAAAATTATCAACCTCCTCACAGACAAGCATGGAGCCTGGGGGAGCTCTGCAGTAAGTCGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp TGGCCTCCTACCAGCAGGTTAAAGACAGTTTCTACAATATCCCTATaGGACACTTCTCCAACTTCAACCAACCCCGTCAGCACGGCGAAT +
Preference number: 6 (lower is better)
Translates to: WPPTSRLKTVSTISL*DTSPTSTNPVSTAN
Trigger: ATTCGCCGTGCTGACGGGGTTGGTTGAAGTTGGAGAAGTGTCCAATAGGGATATTGTAGAAACTGTCTTTAACCTGCTGGTAGGAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp CTGGGCTCTTTGCTGCAGATTTCCCCATGGGAATCAGGCTATGTATaGTTTTCGAGCTCTTTGCTGTATCTCCTCTGGCTTTCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LGSLLQISPWESGYV*FSSSLLYLLWLSAV
Trigger: CACAGCTGAAAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACAATACATAGCCTGATTCCCATGGGGAAATCTGCAGCAAAGAGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TCTCAGCTAGCAGCGAGAACAATCCATGCCCAAGCATaGCTTCAGCTTTTCTCTTTGGCGCCAGATGCTTTA +
Preference number: 6 (lower is better)
Translates to: SQLAARTIHAQA*LQLFSLAPDAL
Trigger: TAAAGCATCTGGCGCCAAAGAGAAAAGCTGAAGTCATGCTTGGGCATGGATTGTTCTCGCTGCTAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TCAGGAATCAATTCCTTAATGTCAGATGTGTCGCGCTaGCTGTTTCGCCATGCTCTGGAGACTGAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: SGINSLMSDVSR*LFRHALETEEN
Trigger: GTTCTCCTCAGTCTCCAGAGCATGGCGAAACAGTCAGCGCGACACATCTGACATTAAGGAATTGATTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS TCA 72 bp CCAAAGTCCTTAACAGGTCTCCATTCATGGAGTGTATaGGACACGGCCCTTCTTGGGAACCACTTAACACCA +
Preference number: 6 (lower is better)
Translates to: PKSLTGLHSWSV*DTALLGNHLTP
Trigger: TGGTGTTAAGTGGTTCCCAAGAAGGGCCGTGTCTCATACACTCCATGAATGGAGACCTGTTAAGGACTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS GCA 72 bp AGATGCTTTAAAAAGTATCCCAGTGCCTTGAGTGCCTaGACTCGGATTCCTTCGCTCTTCGATGCCAGAAGT +
Preference number: 6 (lower is better)
Translates to: RCFKKYPSALSA*TRIPSLFDARS
Trigger: ACTTCTGGCATCGAAGAGCGAAGGAATCCGAGTGCAGGCACTCAAGGCACTGGGATACTTTTTAAAGCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp AGAACTTGTACTCCTCCTATGGAGTGCATGGCGCTCTaGATGGAATGTGTCAAAACTGCCTTTACATCCTGG +
Preference number: 6 (lower is better)
Translates to: RTCTPPMECMAL*MECVKTAFTSW
Trigger: CCAGGATGTAAAGGCAGTTTTGACACATTCCATCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GCGGAAACAGAACTTGTACTCCTCCTATGGAGTGCATaGCGCTCTGGATGGAATGTGTCAAAACTGCCTTTA +
Preference number: 6 (lower is better)
Translates to: AETELVLLLWSA*RSGWNVSKLPL
Trigger: TAAAGGCAGTTTTGACACATTCCATCCAGAGCGCCATGCACTCCATAGGAGGAGTACAAGTTCTGTTTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp TCTTACCGGAGATATACCACCAGTCACAATGTCTACTaGGCTCTTTGCTGCAGATTTCCCCATGGGAATCAG +
Preference number: 6 (lower is better)
Translates to: SYRRYTTSHNVY*ALCCRFPHGNQ
Trigger: CTGATTCCCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGACATTGTGACTGGTGGTATATCTCCGGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CCAGTCTGTTTATGCGAACGAATTCTTCCGAGGTTTTaGCCCAAGGAGGAAGTTCAACATCAGACACCACTG +
Preference number: 6 (lower is better)
Translates to: PVCLCERILPRF*PKEEVQHQTPL
Trigger: CAGTGGTGTCTGATGTTGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATTCGTTCGCATAAACAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 72 bp GCCAGTCTGTTTATGCGAACGAATTCTTCCGAGGTTTaGGCCCAAGGAGGAAGTTCAACATCAGACACCACT +
Preference number: 6 (lower is better)
Translates to: ASLFMRTNSSEV*AQGGSSTSDTT
Trigger: AGTGGTGTCTGATGTTGAACTTCCTCCTTGGGCCAAAACCTCGGAAGAATTCGTTCGCATAAACAGACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 90 bp AACACCCGATTCGCATCCGCTGTCTCCGATGATCCCAGGAAGCATTaGTCAAAGGTATCACTGGTGTTGACAAACCATGTTATCTCTCCA +
Preference number: 6 (lower is better)
Translates to: NTRFASAVSDDPRKH*SKVSLVLTNHVISP
Trigger: TGGAGAGATAACATGGTTTGTCAACACCAGTGATACCTTTGACAAATGCTTCCTGGGATCATCGGAGACAGCGGATGCGAATCGGGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp GCTCTTCGATGCCAGAAGTTTATAGATAACACGCAGCCCATTCCTTaGGTCAAAAGCCGGAATCATGGAGTTAGGATGCTCCGCCATCAA +
Preference number: 6 (lower is better)
Translates to: ALRCQKFIDNTQPIP*VKSRNHGVRMLRHQ
Trigger: TTGATGGCGGAGCATCCTAACTCCATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCGTGTTATCTATAAACTTCTGGCATCGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp GATGTCTCTGAAAACAACTGCTCGAAGCCGATTAATGTCCATGTCTaGCAGGAGCCTGTCAAGATCTCTTACCGGAGATATACCACCAGT +
Preference number: 6 (lower is better)
Translates to: DVSENNCSKPINVHV*QEPVKISYRRYTTS
Trigger: ACTGGTGGTATATCTCCGGTAAGAGATCTTGACAGGCTCCTGCAAGACATGGACATTAATCGGCTTCGAGCAGTTGTTTTCAGAGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp GCCCTTACAAGCAAGCATCTGCTCCTGCATAGCAATTaGGTTCTTCAGCAACTCCATGATAAAGGCCAGCAA +
Preference number: 6 (lower is better)
Translates to: ALTSKHLLLHSN*VLQQLHDKGQQ
Trigger: TTGCTGGCCTTTATCATGGAGTTGCTGAAGAACTCAATTGCTATGCAGGAGCAGATGCTTGCTTGTAAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp GCAGCTGCTGCTATTGGCAAGGAATGGTTTAAACACTaGCCATGTTCCACGGCTGTTTTTAGTGTCGCTTCA +
Preference number: 6 (lower is better)
Translates to: AAAAIGKEWFKH*PCSTAVFSVAS
Trigger: TGAAGCGACACTAAAAACAGCCGTGGAACATGGTCAGTGTTTAAACCATTCCTTGCCAATAGCAGCAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212390.2
CDS GCA 72 bp GTTGCAATGATGACACTTCTGTCAAAGGATCTGAACTaGATGGGTGGGTCAACAGACAGATCTCCAAGAGCA +
Preference number: 6 (lower is better)
Translates to: VAMMTLLSKDLN*MGGSTDRSPRA
Trigger: TGCTCTTGGAGATCTGTCTGTTGACCCACCCATGCAGTTCAGATCCTTTGACAGAAGTGTCATCATTGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GCACTGGACAGCTTGCCGTCATACAGTAACAGTTTATaGTGCTCAGCGAGGAAAAGGTCACTTTCTGCTTTA +
Preference number: 6 (lower is better)
Translates to: ALDSLPSYSNSL*CSARKRSLSAL
Trigger: TAAAGCAGAAAGTGACCTTTTCCTCGCTGAGCACCATAAACTGTTACTGTATGACGGCAAGCTGTCCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp TTCCACTTGAACTTCACAGCCATGACCACACATATCTaGTTCTTCTCTGCCTTCAGAGGCAGCTACAGACAA +
Preference number: 6 (lower is better)
Translates to: FHLNFTAMTTHI*FFSAFRGSYRQ
Trigger: TTGTCTGTAGCTGCCTCTGAAGGCAGAGAAGAACCAGATATGTGTGGTCATGGCTGTGAAGTTCAAGTGGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp GACTCAGAGCGAGCTAGGCAAGTGACAACATCCCAATaGCCAAACACCACTTGGATCAATTTTCCTGTATCT +
Preference number: 6 (lower is better)
Translates to: DSERARQVTTSQ*PNTTWINFPVS
Trigger: AGATACAGGAAAATTGATCCAAGTGGTGTTTGGCCATTGGGATGTTGTCACTTGCCTAGCTCGCTCTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 72 bp TTCGCATCCGCTGTCTCCGATGATCCCAGGAAGCATTaGTCAAAGGTATCACTGGTGTTGACAAACCATGTT +
Preference number: 6 (lower is better)
Translates to: FASAVSDDPRKH*SKVSLVLTNHV
Trigger: AACATGGTTTGTCAACACCAGTGATACCTTTGACAAATGCTTCCTGGGATCATCGGAGACAGCGGATGCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp GGAGGGGCATCCCATTCTGCAGATTGCTCAAATACTTaGAAAACGCAAGGCAAAGTTCAAGTACTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: GGASHSADCSNT*KTQGKVQVLLC
Trigger: GCAGAGCAGTACTTGAACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAATCTGCAGAATGGGATGCCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp CTCTCAGTATCTGAAGCCACACTAGAAACATCCAGTTaGGTAATCTTCTGCTCAGAAGTGGCAGGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: LSVSEATLETSS*VIFCSEVAGAS
Trigger: TGAGGCTCCTGCCACTTCTGAGCAGAAGATTACCAAACTGGATGTTTCTAGTGTGGCTTCAGATACTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp ACCAGGCTTGTTCCTTCTATCAGCAGTTCTTGTCCATaGCTACCTAAAAGTGTCCGAGAAAGGAAAGGTGCA +
Preference number: 6 (lower is better)
Translates to: TRLVPSISSSCP*LPKSVRERKGA
Trigger: TGCACCTTTCCTTTCTCGGACACTTTTAGGTAGTCATGGACAAGAACTGCTGATAGAAGGAACAAGCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp AATGAATCGCAAAGAGAGAAAGAAGTGACAGACCTATaGGAGGATCGATTTCCACTGGCAGCTGGTATGGCT +
Preference number: 6 (lower is better)
Translates to: NESQREKEVTDL*EDRFPLAAGMA
Trigger: AGCCATACCAGCTGCCAGTGGAAATCGATCCTCTCATAGGTCTGTCACTTCTTTCTCTCTTTGCGATTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192145.6
CDS GCA 72 bp GAAGCCACACTAGAAACATCCAGTTTGGTAATCTTCTaGTCAGAAGTGGCAGGAGCCTCAGAGACATTATCA +
Preference number: 6 (lower is better)
Translates to: EATLETSSLVIF*SEVAGASETLS
Trigger: TGATAATGTCTCTGAGGCTCCTGCCACTTCTGAGCAGAAGATTACCAAACTGGATGTTTCTAGTGTGGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CAATGTCTACTGGGCTCTTTGCTGCAGATTTCCCCATaGGAATCAGGCTATGTATTGTTTTCGAGCTCTTTG +
Preference number: 6 (lower is better)
Translates to: QCLLGSLLQISP*ESGYVLFSSSL
Trigger: CAAAGAGCTCGAAAACAATACATAGCCTGATTCCCATGGGGAAATCTGCAGCAAAGAGCCCAGTAGACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp CTAATGAAATACGCCTGGTCTGAGGTAATCCAAAACTaGTTCCCACACCAACACGAGGTAGATAGTTCACCA +
Preference number: 6 (lower is better)
Translates to: LMKYAWSEVIQN*FPHQHEVDSSP
Trigger: TGGTGAACTATCTACCTCGTGTTGGTGTGGGAACCAGTTTTGGATTACCTCAGACCAGGCGTATTTCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 72 bp CACAGCTGTTTCAGGAGGGGCATCCCATTCTGCAGATaGCTCAAATACTTTGAAAACGCAAGGCAAAGTTCA +
Preference number: 6 (lower is better)
Translates to: HSCFRRGIPFCR*LKYFENARQSS
Trigger: TGAACTTTGCCTTGCGTTTTCAAAGTATTTGAGCAATCTGCAGAATGGGATGCCCCTCCTGAAACAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp TGCCAGAAGTTTATAGATAACACGCAGCCCATTCCTTaGGTCAAAAGCCGGAATCATGGAGTTAGGATGCTC +
Preference number: 6 (lower is better)
Translates to: CQKFIDNTQPIP*VKSRNHGVRML
Trigger: GAGCATCCTAACTCCATGATTCCGGCTTTTGACCAAAGGAATGGGCTGCGTGTTATCTATAAACTTCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp GAAAACAACTGCTCGAAGCCGATTAATGTCCATGTCTaGCAGGAGCCTGTCAAGATCTCTTACCGGAGATAT +
Preference number: 6 (lower is better)
Translates to: ENNCSKPINVHV*QEPVKISYRRY
Trigger: ATATCTCCGGTAAGAGATCTTGACAGGCTCCTGCAAGACATGGACATTAATCGGCTTCGAGCAGTTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp AGGAGCCTCAGAGACATTATCAGCACAATCACTAACTaGCTCAGTTTCTCCGGCAAGGTTAGTTGCTTTCAT +
Preference number: 6 (lower is better)
Translates to: RSLRDIISTITN*LSFSGKVSCFH
Trigger: ATGAAAGCAACTAACCTTGCCGGAGAAACTGAGTCAGTTAGTGATTGTGCTGATAATGTCTCTGAGGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp AAAACAACTGCTCGAAGCCGATTAATGTCCATGTCTTaGAGGAGCCTGTCAAGATCTCTTACCGGAGATATA +
Preference number: 6 (lower is better)
Translates to: KTTARSRLMSMS*RSLSRSLTGDI
Trigger: TATATCTCCGGTAAGAGATCTTGACAGGCTCCTGCAAGACATGGACATTAATCGGCTTCGAGCAGTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CCA 72 bp ATGACTCAAATCGCTCTGCAAAGAATGCTGCTCGTTTaGGATTCAAAGCTCCTATTGGCTTGGACAAATCTC +
Preference number: 6 (lower is better)
Translates to: MTQIALQRMLLV*DSKLLLAWTNL
Trigger: GAGATTTGTCCAAGCCAATAGGAGCTTTGAATCCCAAACGAGCAGCATTCTTTGCAGAGCGATTTGAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 72 bp CATGTGTCTGCAGTTCAGTGTTGGATGCAGAATCTATaGAACTTGCCCTCCCAATACTTGAGTTCTCATCAC +
Preference number: 6 (lower is better)
Translates to: HVSAVQCWMQNL*NLPSQYLSSHH
Trigger: GTGATGAGAACTCAAGTATTGGGAGGGCAAGTTCAATAGATTCTGCATCCAACACTGAACTGCAGACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp CCATGGGAATCAGGCTATGTATTGTTTTCGAGCTCTTaGCTGTATCTCCTCTGGCTTTCAGCTGTGAATGTT +
Preference number: 6 (lower is better)
Translates to: PWESGYVLFSSS*LYLLWLSAVNV
Trigger: AACATTCACAGCTGAAAGCCAGAGGAGATACAGCAAAGAGCTCGAAAACAATACATAGCCTGATTCCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp CATGACTCAAATCGCTCTGCAAAGAATGCTGCTCGTTaGGGATTCAAAGCTCCTATTGGCTTGGACAAATCT +
Preference number: 6 (lower is better)
Translates to: HDSNRSAKNAAR*GFKAPIGLDKS
Trigger: AGATTTGTCCAAGCCAATAGGAGCTTTGAATCCCAAACGAGCAGCATTCTTTGCAGAGCGATTTGAGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 90 bp AATTCAAACCTCTCAGTATCTGAAGCCACACTAGAAACATCCAGTTaGGTAATCTTCTGCTCAGAAGTGGCAGGAGCCTCAGAGACATTA +
Preference number: 6 (lower is better)
Translates to: NSNLSVSEATLETSS*VIFCSEVAGASETL
Trigger: TAATGTCTCTGAGGCTCCTGCCACTTCTGAGCAGAAGATTACCAAACTGGATGTTTCTAGTGTGGCTTCAGATACTGAGAGGTTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp AGTACTTTTTCCACGAGGCCTACTTCTGTGCAGACTTaGAGATTTCGTATGCTCTTCTTCAGAATGGCTGTA +
Preference number: 6 (lower is better)
Translates to: STFSTRPTSVQT*RFRMLFFRMAV
Trigger: TACAGCCATTCTGAAGAAGAGCATACGAAATCTTCAAGTCTGCACAGAAGTAGGCCTCGTGGAAAAAGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TTGAAAACGCAAGGCAAAGTTCAAGTACTGCTCTGCTaGCGTGGGATTTGGAAGACTTTTCAAGGCTATAAC +
Preference number: 6 (lower is better)
Translates to: LKTQGKVQVLLC*RGIWKTFQGYN
Trigger: GTTATAGCCTTGAAAAGTCTTCCAAATCCCACGTCAGCAGAGCAGTACTTGAACTTTGCCTTGCGTTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp CCAATACTTGAGTTCTCATCACTATTTCTAGTGAAATaGGGAGAGATGGGAGAATCCTTCCGATCTTCGTGC +
Preference number: 6 (lower is better)
Translates to: PILEFSSLFLVK*GEMGESFRSSC
Trigger: GCACGAAGATCGGAAGGATTCTCCCATCTCTCCTCATTTCACTAGAAATAGTGATGAGAACTCAAGTATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp ACAGAGATAAAGTACACAACAGCCAAAGCCAAGAATTaGGCTTGCTTGCTGTCCTCGATGTCTCTGAAAACA +
Preference number: 6 (lower is better)
Translates to: TEIKYTTAKAKN*ACLLSSMSLKT
Trigger: TGTTTTCAGAGACATCGAGGACAGCAAGCAAGCTCAATTCTTGGCTTTGGCTGTTGTGTACTTTATCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp AAGTACTTTTTCCACGAGGCCTACTTCTGTGCAGACTaGAAGATTTCGTATGCTCTTCTTCAGAATGGCTGT +
Preference number: 6 (lower is better)
Translates to: KYFFHEAYFCAD*KISYALLQNGC
Trigger: ACAGCCATTCTGAAGAAGAGCATACGAAATCTTCAAGTCTGCACAGAAGTAGGCCTCGTGGAAAAAGTACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 90 bp GGAGAACTTATGGAAGCACTTACTTCACTGATGGTCACTGTATCTTaGCCTGGTTCCAAAGAATTAGAGTTAATAGTCACTGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: GELMEALTSLMVTVS*PGSKELELIVTGSA
Trigger: AGCAGAGCCAGTGACTATTAACTCTAATTCTTTGGAACCAGGCAAAGATACAGTGACCATCAGTGAAGTAAGTGCTTCCATAAGTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TTGTCTGTGAGGAGGTTGATAATTTTCTGGATTAACTaGGTTGCGGTCACATGGTCTCGATATTTAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LSVRRLIIFWIN*VAVTWSRYLAA
Trigger: AGCAGCTAAATATCGAGACCATGTGACCGCAACTCAGTTAATCCAGAAAATTATCAACCTCCTCACAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp ATTACCAAAAAGCCCTTACAAGCAAGCATCTGCTCCTaGATAGCAATTGAGTTCTTCAGCAACTCCATGATA +
Preference number: 6 (lower is better)
Translates to: ITKKPLQASICS*IAIEFFSNSMI
Trigger: TATCATGGAGTTGCTGAAGAACTCAATTGCTATGCAGGAGCAGATGCTTGCTTGTAAGGGCTTTTTGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp AAGATTGATCTTATCTCTGTGAACAGCCATTTTCCATaGAGACCTTCTGTATATGCCAAGATCTCAGAGTGC +
Preference number: 6 (lower is better)
Translates to: KIDLISVNSHFP*RPSVYAKISEC
Trigger: GCACTCTGAGATCTTGGCATATACAGAAGGTCTGCATGGAAAATGGCTGTTCACAGAGATAAGATCAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195524.2
CDS CCA 72 bp AGCACTTACTTCACTGATGGTCACTGTATCTTTGCCTaGTTCCAAAGAATTAGAGTTAATAGTCACTGGCTC +
Preference number: 6 (lower is better)
Translates to: STYFTDGHCIFA*FQRIRVNSHWL
Trigger: GAGCCAGTGACTATTAACTCTAATTCTTTGGAACCAGGCAAAGATACAGTGACCATCAGTGAAGTAAGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp GCATTCCCATTATCACTACTAGTTTCCTTAAGAGACTaGCTGTGTCTTTCATCTTGGGGTTCCAAAATGTCT +
Preference number: 6 (lower is better)
Translates to: AFPLSLLVSLRD*LCLSSWGSKMS
Trigger: AGACATTTTGGAACCCCAAGATGAAAGACACAGTCAGTCTCTTAAGGAAACTAGTAGTGATAATGGGAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp AAGATTGATCTTATCTCTGTGAACAGCCATTTTCCATaGAGACCTTCTGTATATGCCAAGATCTTTGGGTCA +
Preference number: 6 (lower is better)
Translates to: KIDLISVNSHFP*RPSVYAKIFGS
Trigger: TGACCCAAAGATCTTGGCATATACAGAAGGTCTGCATGGAAAATGGCTGTTCACAGAGATAAGATCAATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
CDS TCA 72 bp AAAGATAACGGCGAGAAAAGATTGATCTTATCTCTGTaGACAGCCATTTTCCATGCAGACCTTCTGTATATG +
Preference number: 6 (lower is better)
Translates to: KDNGEKRLILSL*TAIFHADLLYM
Trigger: CATATACAGAAGGTCTGCATGGAAAATGGCTGTTCACAGAGATAAGATCAATCTTTTCTCGCCGTTATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000195524.2
CDS CAA 72 bp ATGGAAGCACTTACTTCACTGATGGTCACTGTATCTTaGCCTGGTTCCAAAGAATTAGAGTTAATAGTCACT +
Preference number: 6 (lower is better)
Translates to: MEALTSLMVTVS*PGSKELELIVT
Trigger: AGTGACTATTAACTCTAATTCTTTGGAACCAGGCAAAGATACAGTGACCATCAGTGAAGTAAGTGCTTCCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS CAA 72 bp AGGATCATTATGAATTTTAGTAATAGGTGCTTCCACTaGAACTTCACAGCCATGACCACACATATCTGGTTC +
Preference number: 6 (lower is better)
Translates to: RIIMNFSNRCFH*NFTAMTTHIWF
Trigger: GAACCAGATATGTGTGGTCATGGCTGTGAAGTTCAAGTGGAAGCACCTATTACTAAAATTCATAATGATCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp AGAACATTATACATGGTCATTGTGATTAGATTTGTCTaGAGCATAAGTCTCTCAGCTAGCAGCGAGAACAAT +
Preference number: 6 (lower is better)
Translates to: RTLYMVIVIRFV*SISLSASSENN
Trigger: ATTGTTCTCGCTGCTAGCTGAGAGACTTATGCTTCAGACAAATCTAATCACAATGACCATGTATAATGTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp TGTAGTTTCAGGATCATTATGAATTTTAGTAATAGGTaGTTCCACTTGAACTTCACAGCCATGACCACACAT +
Preference number: 6 (lower is better)
Translates to: CSFRIIMNFSNR*FHLNFTAMTTH
Trigger: ATGTGTGGTCATGGCTGTGAAGTTCAAGTGGAAGCACCTATTACTAAAATTCATAATGATCCTGAAACTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS TCA 72 bp TATGGCGTACACCATCTCTGTTATCTTTTGCTCATCTaGATTCTTAGGATTAAAATAGCAGAGAGAAAGCAT +
Preference number: 6 (lower is better)
Translates to: YGVHHLCYLLLI*ILRIKIAERKH
Trigger: ATGCTTTCTCTCTGCTATTTTAATCCTAAGAATTCAGATGAGCAAAAGATAACAGAGATGGTGTACGCCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2
CDS GCA 72 bp TCTACTTTCTTTTCATCACTAGACATATCATGTGTCTaGAGTTCAGTGTTGGATGCAGAATCTATTGAACTT +
Preference number: 6 (lower is better)
Translates to: STFFSSLDISCV*SSVLDAESIEL
Trigger: AAGTTCAATAGATTCTGCATCCAACACTGAACTGCAGACACATGATATGTCTAGTGATGAAAAGAAAGTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000107635.7
ENSMUST00000192145.6
ENSMUST00000194759.6
ENSMUST00000212390.2