Pregenerated sensors for LRATD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020607Ensembl transcript IDs: ENSMUST00000020926.8, ENSMUST00000221405.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGAAGCTTCCAGCCGCTGGCCCTGGGCGGGCGCGTTAGGGGAACATaGGGTGCAGAACTGCGGGGACCGAAAGGGAACTCCGGGCGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RSFQPLALGGRVRGT*GAELRGPKGNSGRG Trigger: CCCACGCCCGGAGTTCCCTTTCGGTCCCCGCAGTTCTGCACCCCATGTTCCCCTAACGCGCCCGCCCAGGGCCAGCGGCTGGAAGCTTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 90 bp | ACCAGGGTTGTCTTAGGAGCGCGCAGCTGCTCCCGCCCAGTGCGGTaGGTGGTGGTGAGTTCCCGAAGCTTCCAGCCGCTGGCCCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: TRVVLGARSCSRPVR*VVVSSRSFQPLALG Trigger: GCCCAGGGCCAGCGGCTGGAAGCTTCGGGAACTCACCACCACCCACCGCACTGGGCGGGAGCAGCTGCGCGCTCCTAAGACAACCCTGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR GCA 90 bp | ACTGACCCTTGGCTCCCTGGAAAGGTAGTGTCCTTGCTCCCCTTTTaGCCACTCCCTCTTTCCCTTCACAACCCAGGGCAGAGGCGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TDPWLPGKVVSLLPF*PLPLSLHNPGQRRR Trigger: CCTGCGCCTCTGCCCTGGGTTGTGAAGGGAAAGAGGGAGTGGGCAAAAGGGGAGCAAGGACACTACCTTTCCAGGGAGCCAAGGGTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 90 bp | GGTGCTTCAACCATTTTCCTCCCGGGACCCAGAAGGCTTTCCTTCTaGCAAGTGTCGGTCAAGCCGGGAATGGCATCGGCTTCCAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: GASTIFLPGPRRLSF*QVSVKPGMASASSC Trigger: GCAACTGGAAGCCGATGCCATTCCCGGCTTGACCGACACTTGCCAGAAGGAAAGCCTTCTGGGTCCCGGGAGGAAAATGGTTGAAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR TCA 90 bp | GCAAAAAGCCTCCTCCTTCCTAAGTTCAAGTGCCCACAGGCCAGGTaGATTAGCTCCTTTTCCGGAGCCAGCAGGCCCTCCTCTCCCAAA | + |
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Preference number: 1 (lower is better) Translates to: AKSLLLPKFKCPQAR*ISSFSGASRPSSPK Trigger: TTTGGGAGAGGAGGGCCTGCTGGCTCCGGAAAAGGAGCTAATTCACCTGGCCTGTGGGCACTTGAACTTAGGAAGGAGGAGGCTTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR TCA 90 bp | TCTCACCTCCGACTGGTTTGTGTGTGCACATCTGGGGGTGGTGGGTaGCGGTTCCCTGTGACTAAGGATATTTGCCCTGTCTGCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: SHLRLVCVCTSGGGG*RFPVTKDICPVCRR Trigger: TCTTCTGCAGACAGGGCAAATATCCTTAGTCACAGGGAACCGTCACCCACCACCCCCAGATGTGCACACACAAACCAGTCGGAGGTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR TCA 90 bp | AGCTGCAAGACAGTTCCAGGCAGCCTCAGGGTAACCTGGAGTCCCTaGAGTGCTCCAAAGTACAGAGACAGGCTCGGTTTCATGGGAATT | + |
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Preference number: 1 (lower is better) Translates to: SCKTVPGSLRVTWSP*SAPKYRDRLGFMGI Trigger: AATTCCCATGAAACCGAGCCTGTCTCTGTACTTTGGAGCACTTCAGGGACTCCAGGTTACCCTGAGGCTGCCTGGAACTGTCTTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 90 bp | GTGACTAAGGATATTTGCCCTGTCTGCAGAAGAGTCACTGACCCTTaGCTCCCTGGAAAGGTAGTGTCCTTGCTCCCCTTTTGCCCACTC | + |
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Preference number: 1 (lower is better) Translates to: VTKDICPVCRRVTDP*LPGKVVSLLPFCPL Trigger: GAGTGGGCAAAAGGGGAGCAAGGACACTACCTTTCCAGGGAGCCAAGGGTCAGTGACTCTTCTGCAGACAGGGCAAATATCCTTAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR GCA 90 bp | CAAGACAGTTCCAGGCAGCCTCAGGGTAACCTGGAGTCCCTGAAGTaGTCCAAAGTACAGAGACAGGCTCGGTTTCATGGGAATTCTGAT | + |
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Preference number: 1 (lower is better) Translates to: QDSSRQPQGNLESLK*SKVQRQARFHGNSD Trigger: ATCAGAATTCCCATGAAACCGAGCCTGTCTCTGTACTTTGGAGCACTTCAGGGACTCCAGGTTACCCTGAGGCTGCCTGGAACTGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 90 bp | CTTCCAGTTGCTCAAACTGAGAAGTCAATCCTATCTAGCTCAGCCTaGAATGCTTTGTCAGGAGACTCTGGGCTGGAGAGCTGCAAGACA | + |
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Preference number: 1 (lower is better) Translates to: LPVAQTEKSILSSSA*NALSGDSGLESCKT Trigger: TGTCTTGCAGCTCTCCAGCCCAGAGTCTCCTGACAAAGCATTCCAGGCTGAGCTAGATAGGATTGACTTCTCAGTTTGAGCAACTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR GCA 90 bp | AGAAATCATTCAGCTTTGGGTGCGATAGAGACTGATGAGTTCTTTTaGCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTTGGAACC | + |
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Preference number: 1 (lower is better) Translates to: RNHSALGAIETDEFF*PLIDTVSRRSPVGT Trigger: GGTTCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACTCATCAGTCTCTATCGCACCCAAAGCTGAATGATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR GCA 90 bp | ACTCTAAGAACAAATGCTATTTATAAATCCCAATCTGGTTTTCATTaGCATCAGGTTTCAGCAAGTATAAAGCTTATGAAGCACTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: TLRTNAIYKSQSGFH*HQVSASIKLMKHSP Trigger: AGGGGAGTGCTTCATAAGCTTTATACTTGCTGAAACCTGATGGCAATGAAAACCAGATTGGGATTTATAAATAGCATTTGTTCTTAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CCA 90 bp | CCGACTGGTTTGTGTGTGCACATCTGGGGGTGGTGGGTGACGGTTCCCTGTGACCAGGCTGGATTACCCTaGCATGATCACCAACACCAG | + |
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Preference number: 2 (lower is better) Translates to: PTGLCVHIWGWWVTVPCDQAGLP*HDHQHQ Trigger: CTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTG...GTCACAGGGAACCGTCACCCACCACCCCCAGATGTGCACACACAAACCAGTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCAACCATTTTCCTCCCGGGACCCAGAAGGCTTTCCTTCTGGCAAGTGTCCTGCAGAAGAGTCACTaGCCCTTGGCTCCCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CFNHFPPGTQKAFLLASVLQKSH*PLAPWK Trigger: TTTCCAGGGAGCCAAGGGTCAGTGACTCTTCTGCAG...GACACTTGCCAGAAGGAAAGCCTTCTGGGTCCCGGGAGGAAAATGGTTGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CAA 90 bp | GCTCAAACTGAGAAGTCAATCCTATCTAGCTCAGCCTGGAATGCTTaGTCAGGAGACTCTGGGCTGGAGAGCTGCAAGACAGTTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: AQTEKSILSSSAWNA*SGDSGLESCKTVPG Trigger: GCCTGGAACTGTCTTGCAGCTCTCCAGCCCAGAGTCTCCTGACAAAGCATTCCAGGCTGAGCTAGATAGGATTGACTTCTCAGTTTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CAA 90 bp | ATTCTGATATCCGGGGGCACATCCACTCTCCATTCGGGAGTTGAATaGTGTCCTGAAAAGACCAACTCTCACCTCCGACTGGTTTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ILISGGTSTLHSGVE*CPEKTNSHLRLVCV Trigger: CACACAAACCAGTCGGAGGTGAGAGTTGGTCTTTTCAGGACACAATTCAACTCCCGAATGGAGAGTGGATGTGCCCCCGGATATCAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCCACAATAAAACTCAAGTGACCCATACAAAGGGATATCAAACCTTAGAGTCTGGGGGTGGTGGGTaGCGGTTCCCTGTGACTAAG | + |
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Preference number: 2 (lower is better) Translates to: LAHNKTQVTHTKGYQTLESGGGG*RFPVTK Trigger: CTTAGTCACAGGGAACCGTCACCCACCACCCCCAGA...CTCTAAGGTTTGATATCCCTTTGTATGGGTCACTTGAGTTTTATTGTGGGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTTTCGAAAGCATACACATCCCATCAAAGAAATCATTCAGCTTTGGGTGCAGAGTCACTGACCCTTaGCTCCCTGGAAAGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: ALFESIHIPSKKSFSFGCRVTDP*LPGKVV Trigger: CACTACCTTTCCAGGGAGCCAAGGGTCAGTGACTCT...GCACCCAAAGCTGAATGATTTCTTTGATGGGATGTGTATGCTTTCGAAAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTTTCGAAAGCATACACATCCCATCAAAGAAATCATTCAGCTTTGGGTGCTTTGTCAGGAGACTCTaGGCTGGAGAGCTGCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: ALFESIHIPSKKSFSFGCFVRRL*AGELQD Trigger: GTCTTGCAGCTCTCCAGCCCAGAGTCTCCTGACAAA...GCACCCAAAGCTGAATGATTTCTTTGATGGGATGTGTATGCTTTCGAAAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CCA 90 bp | GATGAGTTCTTTTGCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTTGGACTATCTAGCTCAGCCTaGAATGCTTTGTCAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: DEFFCPLIDTVSRRSPVGLSSSA*NALSGD Trigger: GTCTCCTGACAAAGCATTCCAGGCTGAGCTAGATAG...TCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CAA 90 bp | AGTTCTTTTGCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTaGGAACCAGTGCTTAGGATGGTATTTAATTCAGCAGGGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SSFAHSLTQCQEGVL*EPVLRMVFNSAGSQ Trigger: TTGGCTCCCTGCTGAATTAAATACCATCCTAAGCACTGGTTCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGCCCACAATAAAACTCAAGTGACCCATACAAAGGGATATCAAACCTTAGAGCTGGAGTCCCTGAAGTaGTCCAAAGTACAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: LAHNKTQVTHTKGYQTLELESLK*SKVQRQ Trigger: CTGTCTCTGTACTTTGGAGCACTTCAGGGACTCCAG...CTCTAAGGTTTGATATCCCTTTGTATGGGTCACTTGAGTTTTATTGTGGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTTCACGTGTCTGCCCAGCTCACCTTTCCTATGTCTTACTCATTTTGTTTGTCTGCCTCCTGCCTCCTaGCTTCTAGTTAGGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: FFTCLPSSPFLCLTHFVCLPPAS*LLVRKS Trigger: GCTTTTCCTAACTAGAAGGCAGGAGGCAGGAGGCAG...ACAAACAAAATGAGTAAGACATAGGAAAGGTGAGCTGGGCAGACACGTGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CCA 90 bp | GATGAGTTCTTTTGCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTTGGAAGAAAAGAACCCTCATaGAACTTGCTAGCAATTTTC | + |
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Preference number: 2 (lower is better) Translates to: DEFFCPLIDTVSRRSPVGRKEPS*NLLAIF Trigger: GAAAATTGCTAGCAAGTTCCATGAGGGTTCTTTTCT...TCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR TCA 72 bp | CGCGCAGCTGCTCCCGCCCAGTGCGGTGGGTGGTGGTaGGTTCCCGAAGCTTCCAGCCGCTGGCCCTGGGCG | + |
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Preference number: 3 (lower is better) Translates to: RAAAPAQCGGWW*VPEASSRWPWA Trigger: CGCCCAGGGCCAGCGGCTGGAAGCTTCGGGAACTCACCACCACCCACCGCACTGGGCGGGAGCAGCTGCGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 72 bp | GTCTTAGGAGCGCGCAGCTGCTCCCGCCCAGTGCGGTaGGTGGTGGTGAGTTCCCGAAGCTTCCAGCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: VLGARSCSRPVR*VVVSSRSFQPL Trigger: CAGCGGCTGGAAGCTTCGGGAACTCACCACCACCCACCGCACTGGGCGGGAGCAGCTGCGCGCTCCTAAGAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 72 bp | GCTCAGCCTGGAATGCTTTGTCAGGAGACTCTGGGCTaGAGAGCTGCAAGACAGTTCCAGGCAGCCTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: AQPGMLCQETLG*RAARQFQAASG Trigger: CCCTGAGGCTGCCTGGAACTGTCTTGCAGCTCTCCAGCCCAGAGTCTCCTGACAAAGCATTCCAGGCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR GCA 72 bp | TTTCCGGAGCCAGCAGGCCCTCCTCTCCCAAAAAGGTaGTTCAACCATTTTCCTCCCGGGACCCAGAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: FPEPAGPPLPKR*FNHFPPGTQKA Trigger: AGCCTTCTGGGTCCCGGGAGGAAAATGGTTGAAGCACCTTTTTGGGAGAGGAGGGCCTGCTGGCTCCGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 72 bp | TCACAACCCAGGGCAGAGGCGCAGGCTGGATTACCCTaGCATGATCACCAACACCAGGGTTGTCTTAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: SQPRAEAQAGLP*HDHQHQGCLRS Trigger: GCTCCTAAGACAACCCTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTGCGCCTCTGCCCTGGGTTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 72 bp | ACCATTTTCCTCCCGGGACCCAGAAGGCTTTCCTTCTaGCAAGTGTCGGTCAAGCCGGGAATGGCATCGGCT | + |
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Preference number: 3 (lower is better) Translates to: TIFLPGPRRLSF*QVSVKPGMASA Trigger: AGCCGATGCCATTCCCGGCTTGACCGACACTTGCCAGAAGGAAAGCCTTCTGGGTCCCGGGAGGAAAATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR GCA 72 bp | TCCAGGCAGCCTCAGGGTAACCTGGAGTCCCTGAAGTaGTCCAAAGTACAGAGACAGGCTCGGTTTCATGGG | + |
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Preference number: 3 (lower is better) Translates to: SRQPQGNLESLK*SKVQRQARFHG Trigger: CCCATGAAACCGAGCCTGTCTCTGTACTTTGGAGCACTTCAGGGACTCCAGGTTACCCTGAGGCTGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR TCA 72 bp | CCTCCCTCTCCTTCAGTCCCGCTGAATACAGGACTCTaGGTGAGAAGGGAAGCAATCAAGGGCTTCCGAGCA | + |
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Preference number: 3 (lower is better) Translates to: PPSPSVPLNTGL*VRREAIKGFRA Trigger: TGCTCGGAAGCCCTTGATTGCTTCCCTTCTCACTCAGAGTCCTGTATTCAGCGGGACTGAAGGAGAGGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTTCAACCATTTTCCTCCCGGGACCCAGAAGGCTTTCCTTCTGGCAAGTGTCGGAAAGGTAGTGTCCTaGCTCCCCTTTTGCCCACTC | + |
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Preference number: 3 (lower is better) Translates to: CFNHFPPGTQKAFLLASVGKVVS*LPFCPL Trigger: GAGTGGGCAAAAGGGGAGCAAGGACACTACCTTTCC...GACACTTGCCAGAAGGAAAGCCTTCTGGGTCCCGGGAGGAAAATGGTTGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR TCA 72 bp | TGTGCACATCTGGGGGTGGTGGGTGACGGTTCCCTGTaGCTAAGGATATTTGCCCTGTCTGCAGAAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: CAHLGVVGDGSL*LRIFALSAEES Trigger: TGACTCTTCTGCAGACAGGGCAAATATCCTTAGTCACAGGGAACCGTCACCCACCACCCCCAGATGTGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 72 bp | GATATTTGCCCTGTCTGCAGAAGAGTCACTGACCCTTaGCTCCCTGGAAAGGTAGTGTCCTTGCTCCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: DICPVCRRVTDP*LPGKVVSLLPF Trigger: AAAGGGGAGCAAGGACACTACCTTTCCAGGGAGCCAAGGGTCAGTGACTCTTCTGCAGACAGGGCAAATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CCA 72 bp | GCTCAAACTGAGAAGTCAATCCTATCTAGCTCAGCCTaGAATGCTTTGTCAGGAGACTCTGGGCTGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: AQTEKSILSSSA*NALSGDSGLES Trigger: GCTCTCCAGCCCAGAGTCTCCTGACAAAGCATTCCAGGCTGAGCTAGATAGGATTGACTTCTCAGTTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CAA 90 bp | CATGAGAGACTGTGCACCTTCCAAGGTGTGTGTAACACAAAGAATCAAGTAACGGTCCTTGCTCCCCTTTaGCCCACTCCCTCTTTCCCT | + |
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Preference number: 3 (lower is better) Translates to: HERLCTFQGVCNTKNQVTVLAPL*PTPSFP Trigger: AGGGAAAGAGGGAGTGGGCAAAAGGGGAGCAAGGAC...CGTTACTTGATTCTTTGTGTTACACACACCTTGGAAGGTGCACAGTCTCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CAA 90 bp | CATGAGAGACTGTGCACCTTCCAAGGTGTGTGTAACACAAAGAATCAAGTAACGTCAGCCTGGAATGCTTaGTCAGGAGACTCTGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: HERLCTFQGVCNTKNQVTSAWNA*SGDSGL Trigger: CAGCCCAGAGTCTCCTGACAAAGCATTCCAGGCTGA...CGTTACTTGATTCTTTGTGTTACACACACCTTGGAAGGTGCACAGTCTCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTTTTCGAAAGCATACACATCCCATCAAAGAAATCATTCAGCTTTGGGTGCGCTAAACATCATTATTaGACAAACTCCCTCATGAGA | + |
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Preference number: 3 (lower is better) Translates to: ALFESIHIPSKKSFSFGCAKHHY*TNSLMR Trigger: TCTCATGAGGGAGTTTGTCAAATAATGATGTTTAGC...GCACCCAAAGCTGAATGATTTCTTTGATGGGATGTGTATGCTTTCGAAAAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR-3UTR CAA 90 bp | ATCGACACTGTAGGCTTTGTTGATATCGTTGGAAAACTGCTGTTTCATTTTACACATTCGGGAGTTGAATaGTGTCCTGAAAAGACCAAC | + |
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Preference number: 3 (lower is better) Translates to: IDTVGFVDIVGKLLFHFTHSGVE*CPEKTN Trigger: GTTGGTCTTTTCAGGACACAATTCAACTCCCGAATG...TGTAAAATGAAACAGCAGTTTTCCAACGATATCAACAAAGCCTACAGTGTCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR GCA 72 bp | ACATCATTATTTGACAAACTCCCTCATGAGAGACTGTaGACCTTCCAAGGTGTGTGTAACACAAAGAATCAA | + |
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Preference number: 3 (lower is better) Translates to: TSLFDKLPHERL*TFQGVCNTKNQ Trigger: TTGATTCTTTGTGTTACACACACCTTGGAAGGTGCACAGTCTCTCATGAGGGAGTTTGTCAAATAATGATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR TCA 72 bp | AATGATCAAGAGAAGCATCGACACTGTAGGCTTTGTTaGTATCGTTGGAAAACTGCTGTTTCATTTTACAAA | + |
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Preference number: 3 (lower is better) Translates to: NDQEKHRHCRLC*YRWKTAVSFYK Trigger: TTTGTAAAATGAAACAGCAGTTTTCCAACGATATCAACAAAGCCTACAGTGTCGATGCTTCTCTTGATCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR CCA 90 bp | TTGCCCACTCCCTCTTTCCCTTCACAACCCAGGGCAGAGGCGCAGGCTGGATTACCACCCGGCCCACGTTaGCCGCGCCCGCCTGGTACA | + |
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Preference number: 4 (lower is better) Translates to: LPTPSFPSQPRAEAQAGLPPGPR*PRPPGT Trigger: TGTACCAGGCGGGCGCGGCCAACGTGGGCCGGGTGG...TAATCCAGCCTGCGCCTCTGCCCTGGGTTGTGAAGGGAAAGAGGGAGTGGGCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR TCA 90 bp | CTCACCTCCGACTGGTTTGTGTGTGCACATCTGGGGGTGGTGGGTGACGGTTCCCTCAAGTCGGCGCCCTaGGGGCCGCCGGTCACTTTG | + |
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Preference number: 4 (lower is better) Translates to: LTSDWFVCAHLGVVGDGSLKSAP*GPPVTL Trigger: CAAAGTGACCGGCGGCCCTCAGGGCGCCGACTTGAG...GGAACCGTCACCCACCACCCCCAGATGTGCACACACAAACCAGTCGGAGGTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR TCA 90 bp | CCGACTGGTTTGTGTGTGCACATCTGGGGGTGGTGGGTGACGGTTCCCTGTGACCTTGGTGCAGGTGGATaGTCTGCCCGCCGCCCACGT | + |
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Preference number: 4 (lower is better) Translates to: PTGLCVHIWGWWVTVPCDLGAGG*SARRPR Trigger: ACGTGGGCGGCGGGCAGATCATCCACCTGCACCAAG...GTCACAGGGAACCGTCACCCACCACCCCCAGATGTGCACACACAAACCAGTCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR CCA 90 bp | ATGGGGTGCAGAACTGCGGGGACCGAAAGGGAACTCCGGGCGTGGGAACTGGCATGGTACAGGCTGTCCTaGCGGATCTCGCCTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: MGCRTAGTERELRAWELAWYRLS*RISPWC Trigger: GCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCA...TGCCAGTTCCCACGCCCGGAGTTCCCTTTCGGTCCCCGCAGTTCTGCACCCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR GCA 90 bp | CCGACTGGTTTGTGTGTGCACATCTGGGGGTGGTGGGTGACGGTTCCCTGTGACTGGCCACAGGCGTTCTaGACCACTAGCTCGGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PTGLCVHIWGWWVTVPCDWPQAF*TTSSAT Trigger: GGTGGCCGAGCTAGTGGTGCAGAACGCCTGTGGCCA...GTCACAGGGAACCGTCACCCACCACCCCCAGATGTGCACACACAAACCAGTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR TCA 90 bp | TTGCCCACTCCCTCTTTCCCTTCACAACCCAGGGCAGAGGCGCAGGCTGGATTAGACGCTTCTCGCGGATaGGGTCCTCCAGGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LPTPSFPSQPRAEAQAGLDASRG*GPPGCG Trigger: TCCACAGCCTGGAGGACCTCATCCGCGAGAAGCGTC...TAATCCAGCCTGCGCCTCTGCCCTGGGTTGTGAAGGGAAAGAGGGAGTGGGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR CCA 90 bp | CGCAGGCTGGATTACCCTGGCATGATCACCAACACCAGGGTTGTCTTAGGAGCGTCGCCTTGGTGCAGGTaGATGATCTGCCCGCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLDYPGMITNTRVVLGASPWCR*MICPPP Trigger: GGGCGGCGGGCAGATCATCCACCTGCACCAAGGCGA...CGCTCCTAAGACAACCCTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTCAACCATTTTCCTCCCGGGACCCAGAAGGCTTTCCTTCTGGCAAGTGTCTTGGCCGCGCCCGCCTaGTACAGGCTGTCCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: CFNHFPPGTQKAFLLASVLAAPA*YRLSWR Trigger: CCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAA...GACACTTGCCAGAAGGAAAGCCTTCTGGGTCCCGGGAGGAAAATGGTTGAAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR TCA 90 bp | CCGACTGGTTTGTGTGTGCACATCTGGGGGTGGTGGGTGACGGTTCCCTGTGACAGAACTGAGTCTCGTTaGGGACGAGCTGGTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTGLCVHIWGWWVTVPCDRTESR*GRAGAA Trigger: TGCTGCACCAGCTCGTCCTCAACGAGACTCAGTTCT...GTCACAGGGAACCGTCACCCACCACCCCCAGATGTGCACACACAAACCAGTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR TCA 90 bp | AGGCAGCCTCAGGGTAACCTGGAGTCCCTGAAGTGCTCCAAAGTACAGAGACAGAGATCTCCTCGCTCTTaGGGCCCAGGTGGCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RQPQGNLESLKCSKVQRQRSPRS*GPGGHR Trigger: CCTGTGGCCACCTGGGCCTCAAGAGCGAGGAGATCT...CTGTCTCTGTACTTTGGAGCACTTCAGGGACTCCAGGTTACCCTGAGGCTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR GCA 90 bp | CGCAGGCTGGATTACCCTGGCATGATCACCAACACCAGGGTTGTCTTAGGAGCGAAGTCCTCAAGCTCCTaGAGCACTCGCAGGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRLDYPGMITNTRVVLGAKSSSS*STRRRP Trigger: TGGCCGCCTGCGAGTGCTGCAGGAGCTTGAGGACTT...CGCTCCTAAGACAACCCTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGGCTGGATTACCCTGGCATGATCACCAACACCAGGGTTGTCTTAGGAGCGTGGCGGATCTCGCCTTaGTGCAGGTGGATGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLDYPGMITNTRVVLGAWRISP*CRWMIC Trigger: GCAGATCATCCACCTGCACCAAGGCGAGATCCGCCA...CGCTCCTAAGACAACCCTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTCAACCATTTTCCTCCCGGGACCCAGAAGGCTTTCCTTCTGGCAAGTGTCTTGAGGACGAGCTGGTaGAGCAGGTGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFNHFPPGTQKAFLLASVLRTSW*SRWWWW Trigger: CCACCACCACCACCTGCTGCACCAGCTCGTCCTCAA...GACACTTGCCAGAAGGAAAGCCTTCTGGGTCCCGGGAGGAAAATGGTTGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGGCTGGATTACCCTGGCATGATCACCAACACCAGGGTTGTCTTAGGAGCGCTTCTCAATCCCAGATaGGTCCCCAGTGGGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RRLDYPGMITNTRVVLGALLNPR*VPSGQL Trigger: GAGTTGCCCACTGGGGACCCATCTGGGATTGAGAAG...CGCTCCTAAGACAACCCTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | CGCAGGCTGGATTACCCTGGCATGATCACCAACACCAGGGTTGTCTTAGGAGCGGGCCGCCGGTCACTTTaGAAAAGATGCATTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRLDYPGMITNTRVVLGAGRRSL*KRCIPG Trigger: GCCAGGAATGCATCTTTTCCAAAGTGACCGGCGGCC...CGCTCCTAAGACAACCCTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGTTCTTTTGCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTTGGAAGCTGGTGCAGCAGGTaGTGGTGGTGGCGGCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEFFCPLIDTVSRRSPVGSWCSR*WWWRLG Trigger: CCCCAGCCGCCACCACCACCACCTGCTGCACCAGCT...TCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCACAATAAAACTCAAGTGACCCATACAAAGGGATATCAAACCTTAGAGGGTGGTGGTGGCGGCTaGGGCTCTCTGGGCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHNKTQVTHTKGYQTLEGGGGG*GSLGKG Trigger: GCCCTTGCCCAGAGAGCCCCAGCCGCCACCACCACC...CTCTAAGGTTTGATATCCCTTTGTATGGGTCACTTGAGTTTTATTGTGGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| 3UTR CAA 72 bp | TCCGGGGGCACATCCACTCTCCATTCGGGAGTTGAATaGTGTCCTGAAAAGACCAACTCTCACCTCCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SGGTSTLHSGVE*CPEKTNSHLRL Trigger: CAGTCGGAGGTGAGAGTTGGTCTTTTCAGGACACAATTCAACTCCCGAATGGAGAGTGGATGTGCCCCCGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGTTCTTTTGCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTTGGACGGAAGGCGGAGAACTaGGTCTCGTTGAGGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DEFFCPLIDTVSRRSPVGRKAEN*VSLRTS Trigger: GCTCGTCCTCAACGAGACTCAGTTCTCCGCCTTCCG...TCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR GCA 90 bp | CATGAGAGACTGTGCACCTTCCAAGGTGTGTGTAACACAAAGAATCAAGTAACGCCAAACTTGTCCGGCTaGCCGCGTTCGTCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HERLCTFQGVCNTKNQVTPNLSG*PRSSRS Trigger: GGACCTGGACGAACGCGGGCAGCCGGACAAGTTTGG...CGTTACTTGATTCTTTGTGTTACACACACCTTGGAAGGTGCACAGTCTCTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTTCGAAAGCATACACATCCCATCAAAGAAATCATTCAGCTTTGGGTGCCTCGCAGGCGGCCACTaGCGTCTATGCGACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALFESIHIPSKKSFSFGCLAGGH*RLCDAS Trigger: AGAAGCGTCGCATAGACGCCAGTGGCCGCCTGCGAG...GCACCCAAAGCTGAATGATTTCTTTGATGGGATGTGTATGCTTTCGAAAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR CCA 90 bp | TTGCTCAAACTGAGAAGTCAATCCTATCTAGCTCAGCCTGGAATGCTTTGTCAGTCGTTGAGGACGAGCTaGTGCAGCAGGTGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKLRSQSYLAQPGMLCQSLRTS*CSRWWW Trigger: CCACCACCACCTGCTGCACCAGCTCGTCCTCAACGA...CTGACAAAGCATTCCAGGCTGAGCTAGATAGGATTGACTTCTCAGTTTGAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CAA 72 bp | GAGAAGTCAATCCTATCTAGCTCAGCCTGGAATGCTTaGTCAGGAGACTCTGGGCTGGAGAGCTGCAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EKSILSSSAWNA*SGDSGLESCKT Trigger: TGTCTTGCAGCTCTCCAGCCCAGAGTCTCCTGACAAAGCATTCCAGGCTGAGCTAGATAGGATTGACTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGTTCTTTTGCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTTGGAGAAAAGATGCATTCCTaGCCCCGGAAGGCGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DEFFCPLIDTVSRRSPVGEKMHS*PRKAEN Trigger: GTTCTCCGCCTTCCGGGGCCAGGAATGCATCTTTTC...TCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTCACGTGTCTGCCCAGCTCACCTTTCCTATGTCTTACTCATTTTGTTTGTCGGATCTCGCCTTGGTaGAGGTGGATGATCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FFTCLPSSPFLCLTHFVCRISPW*RWMICP Trigger: CGGGCAGATCATCCACCTGCACCAAGGCGAGATCCG...ACAAACAAAATGAGTAAGACATAGGAAAGGTGAGCTGGGCAGACACGTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR CCA 90 bp | ATCGACACTGTAGGCTTTGTTGATATCGTTGGAAAACTGCTGTTTCATTTTACACTCTTGAGGCCCAGGTaGCCACAGGCGTTCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: IDTVGFVDIVGKLLFHFTLLRPR*PQAFCT Trigger: GGTGCAGAACGCCTGTGGCCACCTGGGCCTCAAGAG...TGTAAAATGAAACAGCAGTTTTCCAACGATATCAACAAAGCCTACAGTGTCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR GCA 90 bp | GCCCTTTTCGAAAGCATACACATCCCATCAAAGAAATCATTCAGCTTTGGGTGCTCACTTTGGAAAAGATaGATTCCTGGCCCCGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFESIHIPSKKSFSFGCSLWKR*IPGPGR Trigger: CCTTCCGGGGCCAGGAATGCATCTTTTCCAAAGTGA...GCACCCAAAGCTGAATGATTTCTTTGATGGGATGTGTATGCTTTCGAAAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| 3UTR CAA 72 bp | GCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTaGGAACCAGTGCTTAGGATGGTATTTAATTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSLTQCQEGVL*EPVLRMVFNSA Trigger: TGCTGAATTAAATACCATCCTAAGCACTGGTTCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| 3UTR CAA 72 bp | AAAGCATACACATCCCATCAAAGAAATCATTCAGCTTaGGGTGCGATAGAGACTGATGAGTTCTTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAYTSHQRNHSA*GAIETDEFFCP Trigger: TGGGCAAAAGAACTCATCAGTCTCTATCGCACCCAAAGCTGAATGATTTCTTTGATGGGATGTGTATGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 90 bp | ACCACCCGGCCCACGTTGGCCGCGCCCGCCTGGTACAGGCTGTCCTaGCGGATCTCGCCTTGGTGCAGGTGGATGATCTGCCCGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TTRPTLAAPAWYRLS*RISPWCRWMICPPP Trigger: GGGCGGCGGGCAGATCATCCACCTGCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAACGTGGGCCGGGTGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 90 bp | CCAGCGGGCGGTAGCGGTACCAGCTATTCACCACCCGGCCCACGTTaGCCGCGCCCGCCTGGTACAGGCTGTCCTGGCGGATCTCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PAGGSGTSYSPPGPR*PRPPGTGCPGGSRL Trigger: AAGGCGAGATCCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAACGTGGGCCGGGTGGTGAATAGCTGGTACCGCTACCGCCCGCTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 90 bp | AGAGCTCTAGCAGGTCGCCTGGCTCGCAGATCGCCGGCAGCGCAGTaGCCGCGTAGACACTCAAGTCGGCGCCCTGAGGGCCGCCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RALAGRLARRSPAAQ*PRRHSSRRPEGRRS Trigger: TGACCGGCGGCCCTCAGGGCGCCGACTTGAGTGTCTACGCGGTCACTGCGCTGCCGGCGATCTGCGAGCCAGGCGACCTGCTAGAGCTCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 90 bp | CCTGGTACAGGCTGTCCTGGCGGATCTCGCCTTGGTGCAGGTGGATaGTCTGCCCGCCGCCCACGTAGACGGCCCAGTGAGGGGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGTGCPGGSRLGAGG*SARRPRRRPSEGLA Trigger: CGCCAGCCCCTCACTGGGCCGTCTACGTGGGCGGCGGGCAGATCATCCACCTGCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 90 bp | GTGGTGGTGGTGGCGGCTGGGGCTCTCTGGGCAAGGGCTGCAACCTaGGGGGCCCTTCACACCAAACTTGTCCGGCTGCCCGCGTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VVVVAAGALWARAAT*GALHTKLVRLPAFV Trigger: GACGAACGCGGGCAGCCGGACAAGTTTGGTGTGAAGGGCCCCCCAGGTTGCAGCCCTTGCCCAGAGAGCCCCAGCCGCCACCACCACCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 90 bp | CGGTACCAGCTATTCACCACCCGGCCCACGTTGGCCGCGCCCGCCTaGTACAGGCTGTCCTGGCGGATCTCGCCTTGGTGCAGGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RYQLFTTRPTLAAPA*YRLSWRISPWCRWM Trigger: CATCCACCTGCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAACGTGGGCCGGGTGGTGAATAGCTGGTACCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 90 bp | CTCTCGGAGTTCGTCCAGCAGATCTCCTCGCTCTTGAGGCCCAGGTaGCCACAGGCGTTCTGCACCACTAGCTCGGCCACCAGCGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSEFVQQISSLLRPR*PQAFCTTSSATSGR Trigger: CCGCCCGCTGGTGGCCGAGCTAGTGGTGCAGAACGCCTGTGGCCACCTGGGCCTCAAGAGCGAGGAGATCTGCTGGACGAACTCCGAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 90 bp | GCACTCGCAGGCGGCCACTGGCGTCTATGCGACGCTTCTCGCGGATaGGGTCCTCCAGGCTGTGGAACCGGGCCGTGTGGACTTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALAGGHWRLCDASRG*GPPGCGTGPCGLCS Trigger: AGAACAAAGTCCACACGGCCCGGTTCCACAGCCTGGAGGACCTCATCCGCGAGAAGCGTCGCATAGACGCCAGTGGCCGCCTGCGAGTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 90 bp | AGGCAGCGAAGCTCTCGGAGTTCGTCCAGCAGATCTCCTCGCTCTTaGGGCCCAGGTGGCCACAGGCGTTCTGCACCACTAGCTCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQRSSRSSSSRSPRS*GPGGHRRSAPLARP Trigger: TGGCCGAGCTAGTGGTGCAGAACGCCTGTGGCCACCTGGGCCTCAAGAGCGAGGAGATCTGCTGGACGAACTCCGAGAGCTTCGCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR CAA 90 bp | TGCTTCAACCATTTTCCTCCCGGGACCCAGAAGGCTTTCCTTCTGGCAAGTGTCACCACCCGGCCCACGTaGGCCGCGCCCGCCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CFNHFPPGTQKAFLLASVTTRPT*AAPAWY Trigger: GTACCAGGCGGGCGCGGCCAACGTGGGCCGGGTGGT...GACACTTGCCAGAAGGAAAGCCTTCTGGGTCCCGGGAGGAAAATGGTTGAAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 90 bp | CCGCGTAGACACTCAAGTCGGCGCCCTGAGGGCCGCCGGTCACTTTaGAAAAGATGCATTCCTGGCCCCGGAAGGCGGAGAACTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRRHSSRRPEGRRSL*KRCIPGPGRRRTES Trigger: AGACTCAGTTCTCCGCCTTCCGGGGCCAGGAATGCATCTTTTCCAAAGTGACCGGCGGCCCTCAGGGCGCCGACTTGAGTGTCTACGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 90 bp | GAAGTAGGCAACCCCGACTCGCAGCTCGTCCTTCTCAATCCCAGATaGGTCCCCAGTGGGCAACTCGCTGTAGTTGAGGTGGGTGATGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVGNPDSQLVLLNPR*VPSGQLAVVEVGDA Trigger: CGCATCACCCACCTCAACTACAGCGAGTTGCCCACTGGGGACCCATCTGGGATTGAGAAGGACGAGCTGCGAGTCGGGGTTGCCTACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020926.8 ENSMUST00000221405.2 |
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| CDS CCA 90 bp | CTGGCGTCTATGCGACGCTTCTCGCGGATGAGGTCCTCCAGGCTGTaGAACCGGGCCGTGTGGACTTTGTTCTCCTCCAGATGCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LASMRRFSRMRSSRL*NRAVWTLFSSRCTL Trigger: CAAAGTGCATCTGGAGGAGAACAAAGTCCACACGGCCCGGTTCCACAGCCTGGAGGACCTCATCCGCGAGAAGCGTCGCATAGACGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 90 bp | GTCACTTTGGAAAAGATGCATTCCTGGCCCCGGAAGGCGGAGAACTaGGTCTCGTTGAGGACGAGCTGGTGCAGCAGGTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTLEKMHSWPRKAEN*VSLRTSWCSRWWWW Trigger: CCACCACCACCACCTGCTGCACCAGCTCGTCCTCAACGAGACTCAGTTCTCCGCCTTCCGGGGCCAGGAATGCATCTTTTCCAAAGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 90 bp | TGTGGAACCGGGCCGTGTGGACTTTGTTCTCCTCCAGATGCACTTTaGGATAATACTGCTGTTGCGGCGGCTGCGTTCCTGCGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: CGTGPCGLCSPPDAL*DNTAVAAAAFLRGP Trigger: AGGTCCCCGCAGGAACGCAGCCGCCGCAACAGCAGTATTATCTCAAAGTGCATCTGGAGGAGAACAAAGTCCACACGGCCCGGTTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS-3UTR CAA 90 bp | CGCAGGCTGGATTACCCTGGCATGATCACCAACACCAGGGTTGTCTTAGGAGCGGGGCCGCCGGTCACTTaGGAAAAGATGCATTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRLDYPGMITNTRVVLGAGPPVT*EKMHSW Trigger: CCAGGAATGCATCTTTTCCAAAGTGACCGGCGGCCC...CGCTCCTAAGACAACCCTGGTGTTGGTGATCATGCCAGGGTAATCCAGCCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCCTCAGGGTAACCTGGAGTCCCTGAAGTGCTCCAAAGTACAGAGACAGCTGGCGGATCTCGCCTaGGTGCAGGTGGATGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQPQGNLESLKCSKVQRQLADLA*VQVDDL Trigger: CAGATCATCCACCTGCACCAAGGCGAGATCCGCCAG...CTGTCTCTGTACTTTGGAGCACTTCAGGGACTCCAGGTTACCCTGAGGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CAA 90 bp | GATGAGTTCTTTTGCCCACTCATTGACACAGTGTCAAGAAGGAGTCCTGTTGGACCCTTCACACCAAACTaGTCCGGCTGCCCGCGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: DEFFCPLIDTVSRRSPVGPFTPN*SGCPRS Trigger: CGAACGCGGGCAGCCGGACAAGTTTGGTGTGAAGGG...TCCAACAGGACTCCTTCTTGACACTGTGTCAATGAGTGGGCAAAAGAACTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CAA 90 bp | TTTACCCTGGTAAGGGCTGAACAGAGTTCAGCTTCACACTCTTCACATCATGGGACCTCCCCGCCAGCCTaGAACTCGCGCTTTCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTLVRAEQSSASHSSHHGTSPPA*NSRFPK Trigger: CTTTGGAAAGCGCGAGTTCAAGGCTGGCGGGGAGGT...CCCATGATGTGAAGAGTGTGAAGCTGAACTCTGTTCAGCCCTTACCAGGGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTCAAACTGAGAAGTCAATCCTATCTAGCTCAGCCTGGAATGCTTTGTCAGCGGGCCGTGTGGACTTaGTTCTCCTCCAGATGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLKLRSQSYLAQPGMLCQRAVWT*FSSRCT Trigger: AGTGCATCTGGAGGAGAACAAAGTCCACACGGCCCG...CTGACAAAGCATTCCAGGCTGAGCTAGATAGGATTGACTTCTCAGTTTGAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS CAA 90 bp | GTTGGCCGCGCCCGCCTGGTACAGGCTGTCCTGGCGGATCTCGCCTaGGTGCAGGTGGATGATCTGCCCGCCGCCCACGTAGACGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGRARLVQAVLADLA*VQVDDLPAAHVDGP Trigger: TGGGCCGTCTACGTGGGCGGCGGGCAGATCATCCACCTGCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS CCA 72 bp | CTATTCACCACCCGGCCCACGTTGGCCGCGCCCGCCTaGTACAGGCTGTCCTGGCGGATCTCGCCTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LFTTRPTLAAPA*YRLSWRISPWC Trigger: GCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAACGTGGGCCGGGTGGTGAATAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS CCA 72 bp | GGTAGCGGTACCAGCTATTCACCACCCGGCCCACGTTaGCCGCGCCCGCCTGGTACAGGCTGTCCTGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSGTSYSPPGPR*PRPPGTGCPGG Trigger: TCCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAACGTGGGCCGGGTGGTGAATAGCTGGTACCGCTACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
||
| CDS TCA 72 bp | GGCGGCCACTGGCGTCTATGCGACGCTTCTCGCGGATaGGGTCCTCCAGGCTGTGGAACCGGGCCGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GGHWRLCDASRG*GPPGCGTGPCG Trigger: TCCACACGGCCCGGTTCCACAGCCTGGAGGACCTCATCCGCGAGAAGCGTCGCATAGACGCCAGTGGCCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 72 bp | CCCACGTTGGCCGCGCCCGCCTGGTACAGGCTGTCCTaGCGGATCTCGCCTTGGTGCAGGTGGATGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: PTLAAPAWYRLS*RISPWCRWMIC Trigger: GCAGATCATCCACCTGCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCAGGCGGGCGCGGCCAACGTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CAA 72 bp | GCCCGCCTGGTACAGGCTGTCCTGGCGGATCTCGCCTaGGTGCAGGTGGATGATCTGCCCGCCGCCCACGTA | + |
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Preference number: 6 (lower is better) Translates to: ARLVQAVLADLA*VQVDDLPAAHV Trigger: TACGTGGGCGGCGGGCAGATCATCCACCTGCACCAAGGCGAGATCCGCCAGGACAGCCTGTACCAGGCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CAA 90 bp | CAGGCAGCGAAGCTCTCGGAGTTCGTCCAGCAGATCTCCTCGCTCTaGAGGCCCAGGTGGCCACAGGCGTTCTGCACCACTAGCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: QAAKLSEFVQQISSL*RPRWPQAFCTTSSA Trigger: GGCCGAGCTAGTGGTGCAGAACGCCTGTGGCCACCTGGGCCTCAAGAGCGAGGAGATCTGCTGGACGAACTCCGAGAGCTTCGCTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 72 bp | CACTCAAGTCGGCGCCCTGAGGGCCGCCGGTCACTTTaGAAAAGATGCATTCCTGGCCCCGGAAGGCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HSSRRPEGRRSL*KRCIPGPGRRR Trigger: TCTCCGCCTTCCGGGGCCAGGAATGCATCTTTTCCAAAGTGACCGGCGGCCCTCAGGGCGCCGACTTGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 72 bp | TTCGTCCAGCAGATCTCCTCGCTCTTGAGGCCCAGGTaGCCACAGGCGTTCTGCACCACTAGCTCGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: FVQQISSLLRPR*PQAFCTTSSAT Trigger: GGTGGCCGAGCTAGTGGTGCAGAACGCCTGTGGCCACCTGGGCCTCAAGAGCGAGGAGATCTGCTGGACGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 72 bp | AGCTCTCGGAGTTCGTCCAGCAGATCTCCTCGCTCTTaGGGCCCAGGTGGCCACAGGCGTTCTGCACCACTA | + |
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Preference number: 6 (lower is better) Translates to: SSRSSSSRSPRS*GPGGHRRSAPL Trigger: TAGTGGTGCAGAACGCCTGTGGCCACCTGGGCCTCAAGAGCGAGGAGATCTGCTGGACGAACTCCGAGAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS GCA 72 bp | TTTGAGATAATACTGCTGTTGCGGCGGCTGCGTTCCTaGGGGGACCTCCCCGCCAGCCTTGAACTCGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: FEIILLLRRLRS*GDLPASLELAL Trigger: AAGCGCGAGTTCAAGGCTGGCGGGGAGGTCCCCGCAGGAACGCAGCCGCCGCAACAGCAGTATTATCTCAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 72 bp | ATGCGACGCTTCTCGCGGATGAGGTCCTCCAGGCTGTaGAACCGGGCCGTGTGGACTTTGTTCTCCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: MRRFSRMRSSRL*NRAVWTLFSSR Trigger: TCTGGAGGAGAACAAAGTCCACACGGCCCGGTTCCACAGCCTGGAGGACCTCATCCGCGAGAAGCGTCGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 72 bp | GAAAAGATGCATTCCTGGCCCCGGAAGGCGGAGAACTaGGTCTCGTTGAGGACGAGCTGGTGCAGCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: EKMHSWPRKAEN*VSLRTSWCSRW Trigger: CCACCTGCTGCACCAGCTCGTCCTCAACGAGACTCAGTTCTCCGCCTTCCGGGGCCAGGAATGCATCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS CCA 72 bp | AACCCCGACTCGCAGCTCGTCCTTCTCAATCCCAGATaGGTCCCCAGTGGGCAACTCGCTGTAGTTGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: NPDSQLVLLNPR*VPSGQLAVVEV Trigger: CACCTCAACTACAGCGAGTTGCCCACTGGGGACCCATCTGGGATTGAGAAGGACGAGCTGCGAGTCGGGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020926.8 ENSMUST00000221405.2 |
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| CDS CAA 90 bp | GTGGACTTTGTTCTCCTCCAGATGCACTTTGAGATAATACTGCTGTaGCGGCGGCTGCGTTCCTGCGGGGACCTCCCCGCCAGCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: VDFVLLQMHFEIILL*RRLRSCGDLPASLE Trigger: TTCAAGGCTGGCGGGGAGGTCCCCGCAGGAACGCAGCCGCCGCAACAGCAGTATTATCTCAAAGTGCATCTGGAGGAGAACAAAGTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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| CDS TCA 72 bp | GGGCCGTGTGGACTTTGTTCTCCTCCAGATGCACTTTaGGATAATACTGCTGTTGCGGCGGCTGCGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GPCGLCSPPDAL*DNTAVAAAAFL Trigger: CAGGAACGCAGCCGCCGCAACAGCAGTATTATCTCAAAGTGCATCTGGAGGAGAACAAAGTCCACACGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020926.8 |
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