Pregenerated sensors for LRAT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028003Ensembl transcript IDs: ENSMUST00000029632.7
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGCTGCTGACTTCTGACAGGCTGACACACGCTTCCAGGGGCTCGTaGTGCTCTGCAGCAGAGCTGCCTGAGAGGACTCAGAAAGACTTT | + |
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Preference number: 1 (lower is better) Translates to: RLLTSDRLTHASRGS*CSAAELPERTQKDF Trigger: AAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCCTGGAAGCGTGTGTCAGCCTGTCAGAAGTCAGCAGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 90 bp | GACACACGCTTCCAGGGGCTCGTGGTGCTCTGCAGCAGAGCTGCCTaGGAGGACTCAGAAAGACTTTGTTTGGCTTACATGGCAAGCACG | + |
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Preference number: 1 (lower is better) Translates to: DTRFQGLVVLCSRAA*EDSERLCLAYMAST Trigger: CGTGCTTGCCATGTAAGCCAAACAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCCTGGAAGCGTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 90 bp | AGGAAAAGAATAACCTACAGAATCTCCTGTGGCTGTCACCTCAGGTaGCACTTCCTCCGGCTGCTGACTTCTGACAGGCTGACACACGCT | + |
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Preference number: 1 (lower is better) Translates to: RKRITYRISCGCHLR*HFLRLLTSDRLTHA Trigger: AGCGTGTGTCAGCCTGTCAGAAGTCAGCAGCCGGAGGAAGTGGCACCTGAGGTGACAGCCACAGGAGATTCTGTAGGTTATTCTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 90 bp | CTCTTCGGTGCGGAGTCATCTCTTCGATGCCTGCTGTGTAACTTTTaGCAGTTAACAGACAGCAGACAGTATTGTGCTGCAGCCCACACA | + |
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Preference number: 1 (lower is better) Translates to: LFGAESSLRCLLCNF*QLTDSRQYCAAAHT Trigger: TGTGTGGGCTGCAGCACAATACTGTCTGCTGTCTGTTAACTGTCAAAAGTTACACAGCAGGCATCGAAGAGATGACTCCGCACCGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CCA 90 bp | TGCTCTGCAGCAGAGCTGCCTGAGAGGACTCAGAAAGACTTTGTTTaGCTTACATGGCAAGCACGTGGTATGATTCTTAATCACTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: CSAAELPERTQKDFV*LTWQARGMILNHLV Trigger: AACCAAGTGATTAAGAATCATACCACGTGCTTGCCATGTAAGCCAAACAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 90 bp | GTTTCCATTCATTCCCCATGCCGTTCCCATGTGTGGAATGTCCTGTaGAAATTTGTCCAATCATTGTATTCTCAGTACCCCTGCCTGATT | + |
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Preference number: 1 (lower is better) Translates to: VSIHSPCRSHVWNVL*KFVQSLYSQYPCLI Trigger: AATCAGGCAGGGGTACTGAGAATACAATGATTGGACAAATTTGCACAGGACATTCCACACATGGGAACGGCATGGGGAATGAATGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CCA 90 bp | GCAGAGCTGCCTGAGAGGACTCAGAAAGACTTTGTTTGGCTTACATaGCAAGCACGTGGTATGATTCTTAATCACTTGGTTTCTTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: AELPERTQKDFVWLT*QARGMILNHLVSCC Trigger: ACAACAAGAAACCAAGTGATTAAGAATCATACCACGTGCTTGCCATGTAAGCCAAACAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 90 bp | TATTCCCTAACACTCCATCAGAGTCGTTCATCAGTCAAATCTAAGTaGTTCCAGTTGTTTGGCACTTCTCTGACATACTGCTTTCTCGAC | + |
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Preference number: 1 (lower is better) Translates to: YSLTLHQSRSSVKSK*FQLFGTSLTYCFLD Trigger: GTCGAGAAAGCAGTATGTCAGAGAAGTGCCAAACAACTGGAAGCACTTAGATTTGACTGATGAACGACTCTGATGGAGTGTTAGGGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 90 bp | TCCTTTGTTCAGGTTGGCTCACTGACTAAAACAAATCCTCCTTTCTaGCATAAGAGTCACTGTACTGTGATTCTTTTGTCTCATGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: SFVQVGSLTKTNPPF*HKSHCTVILLSHVA Trigger: GGCTACATGAGACAAAAGAATCACAGTACAGTGACTCTTATGGCAGAAAGGAGGATTTGTTTTAGTCAGTGAGCCAACCTGAACAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 90 bp | TCCTTAGAAAGGAGCACACCTAGCCGAGTGAATGTTAGGAGTGTATaGACAGTTGTAAAGTTAATTTATTTTGCAGTAATCAACGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: SLERSTPSRVNVRSV*TVVKLIYFAVINAF Trigger: GAAGGCGTTGATTACTGCAAAATAAATTAACTTTACAACTGTGCATACACTCCTAACATTCACTCGGCTAGGTGTGCTCCTTTCTAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 90 bp | CATATTCACATACAGACTCAAGGGCACAGGAAAAGACACTGGGCTTaGTTTTATGTTTGTAGATCCTCATTAATAAATGGCGCTAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: HIHIQTQGHRKRHWA*FYVCRSSLINGASV Trigger: TACACTAGCGCCATTTATTAATGAGGATCTACAAACATAAAATCAAGCCCAGTGTCTTTTCCTGTGCCCTTGAGTCTGTATGTGAATATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 90 bp | CTGCTTTATTCTTGGAAGTTATCTTTCTATCCCCCAACTCTCTACTaGCTATCCATAAAGTCCAAACTTCTTGATCTACAAAAGACTTAC | + |
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Preference number: 1 (lower is better) Translates to: LLYSWKLSFYPPTLY*LSIKSKLLDLQKTY Trigger: GTAAGTCTTTTGTAGATCAAGAAGTTTGGACTTTATGGATAGGCAGTAGAGAGTTGGGGGATAGAAAGATAACTTCCAAGAATAAAGCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CCA 90 bp | ACACACCTTCAATGCTTGACATTACTAGTTCTCAGAATAAATTTTTaGCCCTACTTATTTAGGCTTTTATACTGCTGTGACACACCTCTA | + |
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Preference number: 1 (lower is better) Translates to: THLQCLTLLVLRINF*PYLFRLLYCCDTPL Trigger: TAGAGGTGTGTCACAGCAGTATAAAAGCCTAAATAAGTAGGGCCAAAAATTTATTCTGAGAACTAGTAATGTCAAGCATTGAAGGTGTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCCACTTCCTCCGGCTGCTGACTTCTGACAGGCTGACACACGCTTCCAGGGGCAAGCACGTGGTATaGTTCTTAATCACTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: RCHFLRLLTSDRLTHASRGKHVV*FLITWF Trigger: AAACCAAGTGATTAAGAATCATACCACGTGCTTGCC...CCTGGAAGCGTGTGTCAGCCTGTCAGAAGTCAGCAGCCGGAGGAAGTGGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCCACTTCCTCCGGCTGCTGACTTCTGACAGGCTGACACACGCTTCCAGGGAGAACACAGTGTTGTaGGCCACATTTTTAACAACA | + |
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Preference number: 2 (lower is better) Translates to: RCHFLRLLTSDRLTHASRENTVL*ATFLTT Trigger: TGTTGTTAAAAATGTGGCCCACAACACTGTGTTCTC...CCTGGAAGCGTGTGTCAGCCTGTCAGAAGTCAGCAGCCGGAGGAAGTGGCACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | CTTGATCTACAAAAGACTTACACCATCTCAGCCTTGCTTTGTGTTTCTGTATGTGGCTGTCACCTCAGGTaGCACTTCCTCCGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LDLQKTYTISALLCVSVCGCHLR*HFLRLL Trigger: CAGCAGCCGGAGGAAGTGGCACCTGAGGTGACAGCC...ACATACAGAAACACAAAGCAAGGCTGAGATGGTGTAAGTCTTTTGTAGATCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR CCA 90 bp | GAGAGTAGAATGATGTCAGTGTTACAAAATTACCTCAGTGGGTCAGCTTCCTGGCAGCCCACACAGGTCTaGAGCTCTCAATCTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: ESRMMSVLQNYLSGSASWQPTQV*SSQSAG Trigger: ACCAGCAGATTGAGAGCTCCAGACCTGTGTGGGCTG...CCAGGAAGCTGACCCACTGAGGTAATTTTGTAACACTGACATCATTCTACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | GAGAGTAGAATGATGTCAGTGTTACAAAATTACCTCAGTGGGTCAGCTTCCTGGCAGACAGTATTGTGCTaGAGCCCACACAGGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: ESRMMSVLQNYLSGSASWQTVLC*SPHRSG Trigger: TCCAGACCTGTGTGGGCTGCAGCACAATACTGTCTG...CCAGGAAGCTGACCCACTGAGGTAATTTTGTAACACTGACATCATTCTACTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR TCA 90 bp | GCACACAGCTCTCTTAGGGAATTCCTTCTAGGCAAATCTCACCCATTGAGTGAGCTGCTGTGTAACTTTTaGCAGTTAACAGACAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AHSSLREFLLGKSHPLSELLCNF*QLTDSR Trigger: TCTGCTGTCTGTTAACTGTCAAAAGTTACACAGCAG...CTCACTCAATGGGTGAGATTTGCCTAGAAGGAATTCCCTAAGAGAGCTGTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR CCA 90 bp | GCACACAGCTCTCTTAGGGAATTCCTTCTAGGCAAATCTCACCCATTGAGTGAGCAGAAAGACTTTGTTTaGCTTACATGGCAAGCACGT | + |
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Preference number: 2 (lower is better) Translates to: AHSSLREFLLGKSHPLSEQKDFV*LTWQAR Trigger: ACGTGCTTGCCATGTAAGCCAAACAAAGTCTTTCTG...CTCACTCAATGGGTGAGATTTGCCTAGAAGGAATTCCCTAAGAGAGCTGTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CAA 90 bp | TCTGTCTACCATGTATGTTGTACACATGGAGGCCAGAAGAGGGTGTaGAATCTTCTGGAATTGGAGTTACAGAAGGTTATAAGCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: SVYHVCCTHGGQKRV*NLLELELQKVISHQ Trigger: CTGGTGGCTTATAACCTTCTGTAACTCCAATTCCAGAAGATTCAACACCCTCTTCTGGCCTCCATGTGTACAACATACATGGTAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CAA 90 bp | TGCCGTTCCCATGTGTGGAATGTCCTGTGCAAATTTGTCCAATCATaGTATTCTCAGTACCCCTGCCTGATTTTGGTTTCATCAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: CRSHVWNVLCKFVQS*YSQYPCLILVSSAK Trigger: TTTAGCTGATGAAACCAAAATCAGGCAGGGGTACTGAGAATACAATGATTGGACAAATTTGCACAGGACATTCCACACATGGGAACGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | GCACACAGCTCTCTTAGGGAATTCCTTCTAGGCAAATCTCACCCATTGAGTGAGGAAACACACCTTCAATaGTTGACATTACTAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: AHSSLREFLLGKSHPLSEETHLQ*LTLLVL Trigger: GAGAACTAGTAATGTCAAGCATTGAAGGTGTGTTTC...CTCACTCAATGGGTGAGATTTGCCTAGAAGGAATTCCCTAAGAGAGCTGTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | GAGAGTAGAATGATGTCAGTGTTACAAAATTACCTCAGTGGGTCAGCTTCCTGGCTGGAGCTCTCAATCTaGTGGTTCAACCTTTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: ESRMMSVLQNYLSGSASWLELSI*WFNLLS Trigger: ACTTAAAAGGTTGAACCAGCAGATTGAGAGCTCCAG...CCAGGAAGCTGACCCACTGAGGTAATTTTGTAACACTGACATCATTCTACTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | TTTTGGTTTCATCAGCTAAAATTAGTCCCTTCTCTCTGTGTGCCTTCAGTTAGCGAGAAATCCACGACTTaGCACCTCAGGTTAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: FWFHQLKLVPSLCVPSVSEKSTT*HLRLGN Trigger: GTTTCCTAACCTGAGGTGGCAAGTCGTGGATTTCTC...GCTAACTGAAGGCACACAGAGAGAAGGGACTAATTTTAGCTGATGAAACCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR CCA 90 bp | CTAAACGCTGTTCTCTCCTTTGTTCAGGTTGGCTCACTGACTAAAACAAATCCTCTGGTAACTAAATCCTaGTCCTCTTCAAGAGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LNAVLSFVQVGSLTKTNPLVTKS*SSSRVA Trigger: TGCTACTCTTGAAGAGGACCAGGATTTAGTTACCAG...AGGATTTGTTTTAGTCAGTGAGCCAACCTGAACAAAGGAGAGAACAGCGTTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CAA 90 bp | GTCTCCACTCTGACCCAGTGGAGTGAGGAAACACACCTTCAATGCTaGACATTACTAGTTCTCAGAATAAATTTTTGGCCCTACTTATTT | + |
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Preference number: 2 (lower is better) Translates to: VSTLTQWSEETHLQC*TLLVLRINFWPYLF Trigger: AAATAAGTAGGGCCAAAAATTTATTCTGAGAACTAGTAATGTCAAGCATTGAAGGTGTGTTTCCTCACTCCACTGGGTCAGAGTGGAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CAA 90 bp | ACAAATCCTCCTTTCTGCCATAAGAGTCACTGTACTGTGATTCTTTaGTCTCATGTAGCCAGACTGGTCTTGAACTACCTATGTAGTACA | + |
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Preference number: 2 (lower is better) Translates to: TNPPFCHKSHCTVIL*SHVARLVLNYLCST Trigger: TGTACTACATAGGTAGTTCAAGACCAGTCTGGCTACATGAGACAAAAGAATCACAGTACAGTGACTCTTATGGCAGAAAGGAGGATTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR TCA 90 bp | CTAAACGCTGTTCTCTCCTTTGTTCAGGTTGGCTCACTGACTAAAACAAATCCTCTAGTAACTGCTTTCTaGACAGTCACTCTCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: LNAVLSFVQVGSLTKTNPLVTAF*TVTLSK Trigger: TTTACTGAGAGTGACTGTTCAGAAAGCAGTTACTAG...AGGATTTGTTTTAGTCAGTGAGCCAACCTGAACAAAGGAGAGAACAGCGTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | TTTTGGTTTCATCAGCTAAAATTAGTCCCTTCTCTCTGTGTGCCTTCAGTTAGCAAAGGCACTAACCAATaGCTGTCAGATGCACAGATA | + |
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Preference number: 2 (lower is better) Translates to: FWFHQLKLVPSLCVPSVSKGTNQ*LSDAQI Trigger: TATCTGTGCATCTGACAGGCATTGGTTAGTGCCTTT...GCTAACTGAAGGCACACAGAGAGAAGGGACTAATTTTAGCTGATGAAACCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGTTTCATCAGCTAAAATTAGTCCCTTCTCTCTGTGTGCCTTCAGTTAGCGCTTTTATACTGCTGTaGCACACCTCTATTGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: FWFHQLKLVPSLCVPSVSAFILL*HTSIVF Trigger: AAACACAATAGAGGTGTGTCACAGCAGTATAAAAGC...GCTAACTGAAGGCACACAGAGAGAAGGGACTAATTTTAGCTGATGAAACCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | TTTTGGTTTCATCAGCTAAAATTAGTCCCTTCTCTCTGTGTGCCTTCAGTTAGCCTTCCTGGTTATTATTaGCTCCTTCAAGTAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: FWFHQLKLVPSLCVPSVSLPGYY*LLQVKC Trigger: GCACTTTACTTGAAGGAGGCAATAATAACCAGGAAG...GCTAACTGAAGGCACACAGAGAGAAGGGACTAATTTTAGCTGATGAAACCAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR GCA 90 bp | CTTGATCTACAAAAGACTTACACCATCTCAGCCTTGCTTTGTGTTTCTGTATGTGTTGCAGTACTTAAGTaGTTAGCACAGAATGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LDLQKTYTISALLCVSVCVAVLK*LAQNEH Trigger: ATGCTCATTCTGTGCTAAGCACTTAAGTACTGCAAC...ACATACAGAAACACAAAGCAAGGCTGAGATGGTGTAAGTCTTTTGTAGATCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 72 bp | TCACCTCAGGTGCCACTTCCTCCGGCTGCTGACTTCTaGCAGGCTGACACACGCTTCCAGGGGCTCGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: SPQVPLPPAADF*QADTRFQGLVV Trigger: CACCACGAGCCCCTGGAAGCGTGTGTCAGCCTGTCAGAAGTCAGCAGCCGGAGGAAGTGGCACCTGAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 72 bp | TCTGACAGGCTGACACACGCTTCCAGGGGCTCGTGGTaGTCTGCAGCAGAGCTGCCTGAGAGGACTCAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SDRLTHASRGSW*SAAELPERTQK Trigger: TTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCCTGGAAGCGTGTGTCAGCCTGTCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 72 bp | TACTTCCTCACTGAGCCATCTCACCATCTATGCCGGTaGTTCTCGACCTGTGGGTCAGGACGCTTTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: YFLTEPSHHLCR*FSTCGSGRFGA Trigger: TGCCCCAAAGCGTCCTGACCCACAGGTCGAGAATCACCGGCATAGATGGTGAGATGGCTCAGTGAGGAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 72 bp | ATAACCTACAGAATCTCCTGTGGCTGTCACCTCAGGTaGCACTTCCTCCGGCTGCTGACTTCTGACAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ITYRISCGCHLR*HFLRLLTSDRL Trigger: CAGCCTGTCAGAAGTCAGCAGCCGGAGGAAGTGGCACCTGAGGTGACAGCCACAGGAGATTCTGTAGGTTAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 72 bp | TTCCAGGGGCTCGTGGTGCTCTGCAGCAGAGCTGCCTaGGAGGACTCAGAAAGACTTTGTTTGGCTTACATG | + |
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Preference number: 3 (lower is better) Translates to: FQGLVVLCSRAA*EDSERLCLAYM Trigger: CATGTAAGCCAAACAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 72 bp | TGTGTGAGCAGGCTAGTCTTGAACTCCCAATCTTCCTaGCTCCACATCCCAAGGGGTGTGATTACATGCTTG | + |
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Preference number: 3 (lower is better) Translates to: CVSRLVLNSQSS*LHIPRGVITCL Trigger: CAAGCATGTAATCACACCCCTTGGGATGTGGAGGCAGGAAGATTGGGAGTTCAAGACTAGCCTGCTCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR CAA 90 bp | GCACACAGCTCTCTTAGGGAATTCCTTCTAGGCAAATCTCACCCATTGAGTGAGGGCCAGAAGAGGGTGTaGAATCTTCTGGAATTGGAG | + |
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Preference number: 3 (lower is better) Translates to: AHSSLREFLLGKSHPLSEGQKRV*NLLELE Trigger: CTCCAATTCCAGAAGATTCAACACCCTCTTCTGGCC...CTCACTCAATGGGTGAGATTTGCCTAGAAGGAATTCCCTAAGAGAGCTGTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 72 bp | TTCATTCCATACACAGCCTACTCCCTGATACTTGCATaGAGTCATCTTAAACCCAGCAAGTCCTGTGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FIPYTAYSLILA*SHLKPSKSCGP Trigger: GGGGCCACAGGACTTGCTGGGTTTAAGATGACTTCATGCAAGTATCAGGGAGTAGGCTGTGTATGGAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR CCA 72 bp | GTTATAAGCCACCAGGAGCTGCTGGTAACTAAATCCTaGTCCTCTTCAAGAGTAGCAATAGCTCTTCGGTGC | + |
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Preference number: 3 (lower is better) Translates to: VISHQELLVTKS*SSSRVAIALRC Trigger: GCACCGAAGAGCTATTGCTACTCTTGAAGAGGACCAGGATTTAGTTACCAGCAGCTCCTGGTGGCTTATAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR-3UTR CAA 90 bp | GCACACAGCTCTCTTAGGGAATTCCTTCTAGGCAAATCTCACCCATTGAGTGAGTCAGAAAGACTTTGTTaGGCTTACATGGCAAGCACG | + |
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Preference number: 3 (lower is better) Translates to: AHSSLREFLLGKSHPLSESERLC*AYMAST Trigger: CGTGCTTGCCATGTAAGCCAAACAAAGTCTTTCTGA...CTCACTCAATGGGTGAGATTTGCCTAGAAGGAATTCCCTAAGAGAGCTGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 72 bp | GCGGAGTCATCTCTTCGATGCCTGCTGTGTAACTTTTaGCAGTTAACAGACAGCAGACAGTATTGTGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: AESSLRCLLCNF*QLTDSRQYCAA Trigger: TGCAGCACAATACTGTCTGCTGTCTGTTAACTGTCAAAAGTTACACAGCAGGCATCGAAGAGATGACTCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 72 bp | CAGCTTCCTGGTTATTATTGCCTCCTTCAAGTAAAGTaGCTGACTCCTGAGGCAGAATTGCTTGCTCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QLPGYYCLLQVK*LTPEAELLALL Trigger: CAGAAGAGCAAGCAATTCTGCCTCAGGAGTCAGGCACTTTACTTGAAGGAGGCAATAATAACCAGGAAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 72 bp | CATTCCCCATGCCGTTCCCATGTGTGGAATGTCCTGTaGAAATTTGTCCAATCATTGTATTCTCAGTACCCC | + |
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Preference number: 3 (lower is better) Translates to: HSPCRSHVWNVL*KFVQSLYSQYP Trigger: GGGGTACTGAGAATACAATGATTGGACAAATTTGCACAGGACATTCCACACATGGGAACGGCATGGGGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR GCA 72 bp | AAAATTACCTCAGTGGGTCAGCTTCCTGGTTATTATTaGCTCCTTCAAGTAAAGTGCCTGACTCCTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: KITSVGQLPGYY*LLQVKCLTPEA Trigger: TGCCTCAGGAGTCAGGCACTTTACTTGAAGGAGGCAATAATAACCAGGAAGCTGACCCACTGAGGTAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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| 3UTR TCA 72 bp | TACCAGAAATGTGACTCCAACATGGGTCATTTTTCGTaGCAGTCTTGGAGGCATGCTTTAAACACTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: YQKCDSNMGHFS*QSWRHALNTAR Trigger: CCTAGCAGTGTTTAAAGCATGCCTCCAAGACTGTCACGAAAAATGACCCATGTTGGAGTCACATTTCTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR TCA 72 bp | CCTTGCTCAGCAGCCCCTAGACCACTTGCATTTACCTaGCATAGAATACCTCAAGCTATTCATGATGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: PCSAAPRPLAFT*HRIPQAIHDAY Trigger: ATATGCATCATGAATAGCTTGAGGTATTCTATGTCAGGTAAATGCAAGTGGTCTAGGGGCTGCTGAGCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR TCA 72 bp | TTAAAGGATCGCAGCACTAGGGAGGTTGAGAACCACTaGTCTAGACACTTATCTGACAGACAAAGACCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LKDRSTREVENH*SRHLSDRQRPY Trigger: GTAAGGTCTTTGTCTGTCAGATAAGTGTCTAGATCAGTGGTTCTCAACCTCCCTAGTGCTGCGATCCTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR TCA 72 bp | TCAAATCTAAGTGCTTCCAGTTGTTTGGCACTTCTCTaGCATACTGCTTTCTCGACTTGCAAGTGTAGACCC | + |
|
Preference number: 3 (lower is better) Translates to: SNLSASSCLALL*HTAFSTCKCRP Trigger: GGGTCTACACTTGCAAGTCGAGAAAGCAGTATGTCAGAGAAGTGCCAAACAACTGGAAGCACTTAGATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR GCA 72 bp | ACACTCCATCAGAGTCGTTCATCAGTCAAATCTAAGTaGTTCCAGTTGTTTGGCACTTCTCTGACATACTGC | + |
|
Preference number: 3 (lower is better) Translates to: TLHQSRSSVKSK*FQLFGTSLTYC Trigger: GCAGTATGTCAGAGAAGTGCCAAACAACTGGAAGCACTTAGATTTGACTGATGAACGACTCTGATGGAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CCA 72 bp | GCAGTTTCCATTCATTCCCCATGCCGTTCCCATGTGTaGAATGTCCTGTGCAAATTTGTCCAATCATTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: AVSIHSPCRSHV*NVLCKFVQSLY Trigger: ATACAATGATTGGACAAATTTGCACAGGACATTCCACACATGGGAACGGCATGGGGAATGAATGGAAACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR TCA 72 bp | TTATTATTGCCTCCTTCAAGTAAAGTGCCTGACTCCTaGGGCAGAATTGCTTGCTCTTCTGTCTGTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLPPSSKVPDS*GRIACSSVCIS Trigger: GGAAATACAGACAGAAGAGCAAGCAATTCTGCCTCAGGAGTCAGGCACTTTACTTGAAGGAGGCAATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CCA 72 bp | CCTGAGAGGACTCAGAAAGACTTTGTTTGGCTTACATaGCAAGCACGTGGTATGATTCTTAATCACTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: PERTQKDFVWLT*QARGMILNHLV Trigger: AACCAAGTGATTAAGAATCATACCACGTGCTTGCCATGTAAGCCAAACAAAGTCTTTCTGAGTCCTCTCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CCA 72 bp | TGTGTGTATGTCTGTCTACCATGTATGTTGTACACATaGAGGCCAGAAGAGGGTGTTGAATCTTCTGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: CVYVCLPCMLYT*RPEEGVESSGI Trigger: AATTCCAGAAGATTCAACACCCTCTTCTGGCCTCCATGTGTACAACATACATGGTAGACAGACATACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CCA 72 bp | TCAGTGTTACAAAATTACCTCAGTGGGTCAGCTTCCTaGTTATTATTGCCTCCTTCAAGTAAAGTGCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SVLQNYLSGSAS*LLLPPSSKVPD Trigger: GTCAGGCACTTTACTTGAAGGAGGCAATAATAACCAGGAAGCTGACCCACTGAGGTAATTTTGTAACACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGGTTTCATCAGCTAAAATTAGTCCCTTCTCTCTGTGTGCCTTCAGTTAGCTGTCTACCATGTATGTaGTACACATGGAGGCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FWFHQLKLVPSLCVPSVSCLPCM*YTWRPE Trigger: TTCTGGCCTCCATGTGTACAACATACATGGTAGACA...GCTAACTGAAGGCACACAGAGAGAAGGGACTAATTTTAGCTGATGAAACCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR TCA 72 bp | AGTAATCAACGCCTTCTCAGGAAAATCAAGGAGACATaGTATTCCCTAACACTCCATCAGAGTCGTTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SNQRLLRKIKET*YSLTLHQSRSS Trigger: TGATGAACGACTCTGATGGAGTGTTAGGGAATATCATGTCTCCTTGATTTTCCTGAGAAGGCGTTGATTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGGTTTCATCAGCTAAAATTAGTCCCTTCTCTCTGTGTGCCTTCAGTTAGCATCGAGAACACAGTGTaGTGGGCCACATTTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: FWFHQLKLVPSLCVPSVSIENTV*WATFLT Trigger: TGTTAAAAATGTGGCCCACAACACTGTGTTCTCGAT...GCTAACTGAAGGCACACAGAGAGAAGGGACTAATTTTAGCTGATGAAACCAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGGTTTCATCAGCTAAAATTAGTCCCTTCTCTCTGTGTGCCTTCAGTTAGCTTTTTCGTGACAGTCTaGGAGGCATGCTTTAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: FWFHQLKLVPSLCVPSVSFFVTV*EACFKH Trigger: GTGTTTAAAGCATGCCTCCAAGACTGTCACGAAAAA...GCTAACTGAAGGCACACAGAGAGAAGGGACTAATTTTAGCTGATGAAACCAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR TCA 72 bp | TCTGTCACTGTTTCTCCATTGCTAGTAACTGCTTTCTaGACAGTCACTCTCAGTAAACTCTTTCAACAATGG | + |
|
Preference number: 3 (lower is better) Translates to: SVTVSPLLVTAF*TVTLSKLFQQW Trigger: CCATTGTTGAAAGAGTTTACTGAGAGTGACTGTTCAGAAAGCAGTTACTAGCAATGGAGAAACAGTGACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR GCA 72 bp | ACTCTGACCCAGTGGAGTGAGGAAACACACCTTCAATaGTTGACATTACTAGTTCTCAGAATAAATTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLTQWSEETHLQ*LTLLVLRINFW Trigger: CCAAAAATTTATTCTGAGAACTAGTAATGTCAAGCATTGAAGGTGTGTTTCCTCACTCCACTGGGTCAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR TCA 72 bp | TCATATATCTTTTCATTCCATACACAGCCTACTCCCTaGTACTTGCATGAAGTCATCTTAAACCCAGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SYIFSFHTQPTP*YLHEVILNPAS Trigger: ACTTGCTGGGTTTAAGATGACTTCATGCAAGTATCAGGGAGTAGGCTGTGTATGGAATGAAAAGATATATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR GCA 72 bp | TCTTGGAAGTTATCTTTCTATCCCCCAACTCTCTACTaGCTATCCATAAAGTCCAAACTTCTTGATCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: SWKLSFYPPTLY*LSIKSKLLDLQ Trigger: TTGTAGATCAAGAAGTTTGGACTTTATGGATAGGCAGTAGAGAGTTGGGGGATAGAAAGATAACTTCCAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR GCA 72 bp | AGGAGCACACCTAGCCGAGTGAATGTTAGGAGTGTATaGACAGTTGTAAAGTTAATTTATTTTGCAGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: RSTPSRVNVRSV*TVVKLIYFAVI Trigger: GATTACTGCAAAATAAATTAACTTTACAACTGTGCATACACTCCTAACATTCACTCGGCTAGGTGTGCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CCA 72 bp | GTCAGATGCACAGATACTTCAGGTAATTTAGGTGGTTaGAACAGGCCCAAAGAACACCTATATTCTTTAATT | + |
|
Preference number: 3 (lower is better) Translates to: VRCTDTSGNLGG*NRPKEHLYSLI Trigger: AATTAAAGAATATAGGTGTTCTTTGGGCCTGTTCCAACCACCTAAATTACCTGAAGTATCTGTGCATCTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR GCA 90 bp | GGGGCTCGTGGTGCTCTGCAGCAGAGCTGCCTGAGAGGACTCAGAAAGACTTTGGGAGTCAGTCCCAACTaGTGCTCAGCTCTGCGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GARGALQQSCLRGLRKTLGVSPN*CSALRA Trigger: GGCACGCAGAGCTGAGCAGCAGTTGGGACTGACTCC...CAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCGTGGTGCTCTGCAGCAGAGCTGCCTGAGAGGACTCAGAAAGACTTTGAGGAAGGGTCATATATaGTGCCAGGCCTGTGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GARGALQQSCLRGLRKTLRKGHI*CQACVD Trigger: GTCTACACAGGCCTGGCATCATATATGACCCTTCCT...CAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR CCA 90 bp | GGGGCTCGTGGTGCTCTGCAGCAGAGCTGCCTGAGAGGACTCAGAAAGACTTTGTGCGTTCCTTGTCATTaGTCAGGGCCAACAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GARGALQQSCLRGLRKTLCVPCH*SGPTGC Trigger: ACATCCTGTTGGCCCTGACCAATGACAAGGAACGCA...CAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CAA 72 bp | TCCACGACTTGCCACCTCAGGTTAGGAAACAAATGCTaGGCCCAAGGTTTCCTCCATAACCGACGTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: STTCHLRLGNKC*AQGFLHNRRLY Trigger: ATAAAGACGTCGGTTATGGAGGAAACCTTGGGCCAAGCATTTGTTTCCTAACCTGAGGTGGCAAGTCGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR GCA 90 bp | GCACACAGCTCTCTTAGGGAATTCCTTCTAGGCAAATCTCACCCATTGAGTGAGAGACCACCTTCTGAGTaGGTTCCTTGTCATTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSSLREFLLGKSHPLSERPPSE*VPCHWS Trigger: TGACCAATGACAAGGAACGCACTCAGAAGGTGGTCT...CTCACTCAATGGGTGAGATTTGCCTAGAAGGAATTCCCTAAGAGAGCTGTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR CCA 90 bp | CTAAACGCTGTTCTCTCCTTTGTTCAGGTTGGCTCACTGACTAAAACAAATCCTGGAGGAGACGCTTGTTaGAGACCACCTTCTGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNAVLSFVQVGSLTKTNPGGDAC*RPPSEC Trigger: GCACTCAGAAGGTGGTCTCCAACAAGCGTCTCCTCC...AGGATTTGTTTTAGTCAGTGAGCCAACCTGAACAAAGGAGAGAACAGCGTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CAA 72 bp | CTTTCTCGACTTGCAAGTGTAGACCCTTACTTGAACTaGGGTCATCAGGCTTTGCAGAAGGTATACTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRLASVDPYLN*GHQALQKVYFL Trigger: GAGGAAGTATACCTTCTGCAAAGCCTGATGACCCAAGTTCAAGTAAGGGTCTACACTTGCAAGTCGAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR TCA 90 bp | GCACACAGCTCTCTTAGGGAATTCCTTCTAGGCAAATCTCACCCATTGAGTGAGTTCTCTGATCACGAATaGTTATCTTCACGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHSSLREFLLGKSHPLSEFSDHE*LSSRCH Trigger: ATGACACCGTGAAGATAATCATTCGTGATCAGAGAA...CTCACTCAATGGGTGAGATTTGCCTAGAAGGAATTCCCTAAGAGAGCTGTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CAA 72 bp | ATACTGCTTTCTCGACTTGCAAGTGTAGACCCTTACTaGAACTTGGGTCATCAGGCTTTGCAGAAGGTATAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLSRLASVDPY*NLGHQALQKVY Trigger: GTATACCTTCTGCAAAGCCTGATGACCCAAGTTCAAGTAAGGGTCTACACTTGCAAGTCGAGAAAGCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CAA 72 bp | CAGAGTCGTTCATCAGTCAAATCTAAGTGCTTCCAGTaGTTTGGCACTTCTCTGACATACTGCTTTCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QSRSSVKSKCFQ*FGTSLTYCFLD Trigger: GTCGAGAAAGCAGTATGTCAGAGAAGTGCCAAACAACTGGAAGCACTTAGATTTGACTGATGAACGACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR TCA 90 bp | CTTGATCTACAAAAGACTTACACCATCTCAGCCTTGCTTTGTGTTTCTGTATGTTTGGAGACCACCTTCTaGGTGCGTTCCTTGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LDLQKTYTISALLCVSVCLETTF*VRSLSL Trigger: CAATGACAAGGAACGCACTCAGAAGGTGGTCTCCAA...ACATACAGAAACACAAAGCAAGGCTGAGATGGTGTAAGTCTTTTGTAGATCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR CCA 90 bp | CTAAACGCTGTTCTCTCCTTTGTTCAGGTTGGCTCACTGACTAAAACAAATCCTCATCCACAAGCAGAATaGGATACAGATTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNAVLSFVQVGSLTKTNPHPQAE*DTDCRK Trigger: CTTCCTGCAATCTGTATCCCATTCTGCTTGTGGATG...AGGATTTGTTTTAGTCAGTGAGCCAACCTGAACAAAGGAGAGAACAGCGTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CAA 72 bp | CTGACCCAGTGGAGTGAGGAAACACACCTTCAATGCTaGACATTACTAGTTCTCAGAATAAATTTTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTQWSEETHLQC*TLLVLRINFWP Trigger: GGGCCAAAAATTTATTCTGAGAACTAGTAATGTCAAGCATTGAAGGTGTGTTTCCTCACTCCACTGGGTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CAA 72 bp | CATGTGTGGAATGTCCTGTGCAAATTTGTCCAATCATaGTATTCTCAGTACCCCTGCCTGATTTTGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HVWNVLCKFVQS*YSQYPCLILVS Trigger: TGAAACCAAAATCAGGCAGGGGTACTGAGAATACAATGATTGGACAAATTTGCACAGGACATTCCACACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| 3UTR CAA 72 bp | GAGATTCTCTTATCTACAAGTTCAATGATTCTGGTGTaGTGTAACATTTGCCAAATAGATCCTTCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EILLSTSSMILV*CNICQIDPSFF Trigger: AAAGAAGGAAGGATCTATTTGGCAAATGTTACACAACACCAGAATCATTGAACTTGTAGATAAGAGAATCTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS CCA 90 bp | GGAGACGCTTGTTGGAGACCACCTTCTGAGTGCGTTCCTTGTCATTaGTCAGGGCCAACAGGATGTCAGGCATTAGATGGGCGACACGGT | + |
|
Preference number: 5 (lower is better) Translates to: GDACWRPPSECVPCH*SGPTGCQALDGRHG Trigger: ACCGTGTCGCCCATCTAATGCCTGACATCCTGTTGGCCCTGACCAATGACAAGGAACGCACTCAGAAGGTGGTCTCCAACAAGCGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS TCA 90 bp | TTGCAAATGACTCCCAGGAGGAGACGCTTGTTGGAGACCACCTTCTaGGTGCGTTCCTTGTCATTGGTCAGGGCCAACAGGATGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQMTPRRRRLLETTF*VRSLSLVRANRMSG Trigger: GCCTGACATCCTGTTGGCCCTGACCAATGACAAGGAACGCACTCAGAAGGTGGTCTCCAACAAGCGTCTCCTCCTGGGAGTCATTTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS GCA 90 bp | TCGCAGTTGTTCCACAGTAGGCTGTATGGAGTCAGTCCCAACTGCTaGTCAGCTCTGCGTGCCACCTCCTCATTGAGTAAGGACTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQLFHSRLYGVSPNC*SALRATSSLSKDFF Trigger: GAAGAAGTCCTTACTCAATGAGGAGGTGGCACGCAGAGCTGAGCAGCAGTTGGGACTGACTCCATACAGCCTACTGTGGAACAACTGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR CAA 90 bp | GGGGCTCGTGGTGCTCTGCAGCAGAGCTGCCTGAGAGGACTCAGAAAGACTTTGAGAATGGGATACAGATaGCAGGAAGGGTCATATATG | + |
|
Preference number: 5 (lower is better) Translates to: GARGALQQSCLRGLRKTLRMGYR*QEGSYM Trigger: CATATATGACCCTTCCTGCAATCTGTATCCCATTCT...CAAAGTCTTTCTGAGTCCTCTCAGGCAGCTCTGCTGCAGAGCACCACGAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR CAA 90 bp | GAGAGTAGAATGATGTCAGTGTTACAAAATTACCTCAGTGGGTCAGCTTCCTGGCGGATGCTAGCCACCTaGCAAATGACTCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESRMMSVLQNYLSGSASWRMLAT*QMTPRR Trigger: CCTCCTGGGAGTCATTTGCAAGGTGGCTAGCATCCG...CCAGGAAGCTGACCCACTGAGGTAATTTTGTAACACTGACATCATTCTACTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR CAA 90 bp | GAGAGTAGAATGATGTCAGTGTTACAAAATTACCTCAGTGGGTCAGCTTCCTGGCTCACGCTAAAGAGCTaGAAGTTGGAAATAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESRMMSVLQNYLSGSASWLTLKS*KLEIRS Trigger: GCTCCTTATTTCCAACTTCAAGCTCTTTAGCGTGAG...CCAGGAAGCTGACCCACTGAGGTAATTTTGTAACACTGACATCATTCTACTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS-3UTR CAA 90 bp | CTTGATCTACAAAAGACTTACACCATCTCAGCCTTGCTTTGTGTTTCTGTATGTCTAAAGAGCTTGAAGTaGGAAATAAGGAGCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LDLQKTYTISALLCVSVCLKSLK*EIRSSF Trigger: GAAACTGCTCCTTATTTCCAACTTCAAGCTCTTTAG...ACATACAGAAACACAAAGCAAGGCTGAGATGGTGTAAGTCTTTTGTAGATCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS TCA 72 bp | GTGACACCTCCAACACGTCGCCCCGGACGAAAGAGCTaGTTTCATAGGGACGGTTCTTCCCTGTGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VTPPTRRPGRKS*FHRDGSSLCLL Trigger: GAGGAGGCACAGGGAAGAACCGTCCCTATGAAATCAGCTCTTTCGTCCGGGGCGACGTGTTGGAGGTGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS TCA 72 bp | ACTCCCAGGAGGAGACGCTTGTTGGAGACCACCTTCTaGGTGCGTTCCTTGTCATTGGTCAGGGCCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPRRRRLLETTF*VRSLSLVRANR Trigger: CCTGTTGGCCCTGACCAATGACAAGGAACGCACTCAGAAGGTGGTCTCCAACAAGCGTCTCCTCCTGGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS CAA 72 bp | CCTCCTCCCGGGACGCTCACGCTAAAGAGCTTGAAGTaGGAAATAAGGAGCAGTTTCTCCAGGAGGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPPGTLTLKSLK*EIRSSFSRRRD Trigger: GTCCCTCCTCCTGGAGAAACTGCTCCTTATTTCCAACTTCAAGCTCTTTAGCGTGAGCGTCCCGGGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS CAA 72 bp | CCTGTGCCTCCTCCCGGGACGCTCACGCTAAAGAGCTaGAAGTTGGAAATAAGGAGCAGTTTCTCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVPPPGTLTLKS*KLEIRSSFSRR Trigger: CCTCCTGGAGAAACTGCTCCTTATTTCCAACTTCAAGCTCTTTAGCGTGAGCGTCCCGGGAGGAGGCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS GCA 72 bp | TTCCACAGTAGGCTGTATGGAGTCAGTCCCAACTGCTaGTCAGCTCTGCGTGCCACCTCCTCATTGAGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: FHSRLYGVSPNC*SALRATSSLSK Trigger: CTTACTCAATGAGGAGGTGGCACGCAGAGCTGAGCAGCAGTTGGGACTGACTCCATACAGCCTACTGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS CCA 72 bp | TGTTGGAGACCACCTTCTGAGTGCGTTCCTTGTCATTaGTCAGGGCCAACAGGATGTCAGGCATTAGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: CWRPPSECVPCH*SGPTGCQALDG Trigger: CCCATCTAATGCCTGACATCCTGTTGGCCCTGACCAATGACAAGGAACGCACTCAGAAGGTGGTCTCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS TCA 72 bp | TCTTCACGGTGTCATAGAACTTCTCAGCCTGTGGACTaGTCCGAGAGCCATATCTGCAGTAAGTCACAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSRCHRTSQPVD*SESHICSKSQS Trigger: ACTTTGTGACTTACTGCAGATATGGCTCTCGGATCAGTCCACAGGCTGAGAAGTTCTATGACACCGTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS CCA 72 bp | GATTATCTTCACGGTGTCATAGAACTTCTCAGCCTGTaGACTGATCCGAGAGCCATATCTGCAGTAAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: DYLHGVIELLSL*TDPRAISAVSH Trigger: GTGACTTACTGCAGATATGGCTCTCGGATCAGTCCACAGGCTGAGAAGTTCTATGACACCGTGAAGATAATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
||
| CDS TCA 72 bp | AGACAGCCGAAGCAAGACTGCTTCTCTGATCACGAATaGTTATCTTCACGGTGTCATAGAACTTCTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RQPKQDCFSDHE*LSSRCHRTSQP Trigger: AGGCTGAGAAGTTCTATGACACCGTGAAGATAATCATTCGTGATCAGAGAAGCAGTCTTGCTTCGGCTGTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029632.7 |
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