Pregenerated sensors for LPXN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024696Ensembl transcript IDs: ENSMUST00000025601.8, ENSMUST00000235690.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTTCAAAATGAAGGTATATGCCTAGTAACATCTACAAAGGCCCGTTaGTACTCCATTAGCCCACTGAACAGAAGGCTGGGGACAGAATCT | + |
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Preference number: 2 (lower is better) Translates to: LQNEGICLVTSTKAR*YSISPLNRRLGTES Trigger: AGATTCTGTCCCCAGCCTTCTGTTCAGTGGGCTAATGGAGTACAAACGGGCCTTTGTAGATGTTACTAGGCATATACCTTCATTTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAACTCCATTAGCCCACTaGACAGAAGGCTGGGGACAG | + |
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Preference number: 2 (lower is better) Translates to: AALFITCVSKNTLPLKKQTPLAH*TEGWGQ Trigger: CTGTCCCCAGCCTTCTGTTCAGTGGGCTAATGGAGT...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAATGCTCTTTCCTATCTTaGCCTCAGTTTTATAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: WPTSEDLNGASAEVKGEKCSFLS*PQFYRQ Trigger: TTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCA...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAAGAAGCATCTTCAAAATaGAGGTATATGCCTAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: WPTSEDLNGASAEVKGEKEASSK*RYMPSN Trigger: GTTACTAGGCATATACCTTCATTTTGAAGATGCTTC...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCATGGGGACAGAATCTATaGTCTTTCCTATCTTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RKRKPAVERTVHIRNIPSWGQNL*SFLSWP Trigger: AGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCA...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAATTTAAGACTATTGCGTaGCCCCTGACAGCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AALFITCVSKNTLPLKKQFKTIA*PLTAKR Trigger: TCTCTTTGCTGTCAGGGGTCACGCAATAGTCTTAAA...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAGAGAGTAAAACCCTGTaGCCCACATCTGAAGATTTG | + |
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Preference number: 2 (lower is better) Translates to: AALFITCVSKNTLPLKKQESKTL*PTSEDL Trigger: CAAATCTTCAGATGTGGGCCACAGGGTTTTACTCTC...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR TCA 72 bp | CATCTACAAAGGCCCGTTTGTACTCCATTAGCCCACTaGACAGAAGGCTGGGGACAGAATCTATGCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: HLQRPVCTPLAH*TEGWGQNLCSF Trigger: GAAAGAGCATAGATTCTGTCCCCAGCCTTCTGTTCAGTGGGCTAATGGAGTACAAACGGGCCTTTGTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR TCA 72 bp | AGAGACACTAAGGGTTTAAGACTATTGCGTGACCCCTaGCAGCAAAGAGAGAGTAAAACCCTGTGGCCCACA | + |
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Preference number: 3 (lower is better) Translates to: RDTKGLRLLRDP*QQRESKTLWPT Trigger: TGTGGGCCACAGGGTTTTACTCTCTCTTTGCTGTCAGGGGTCACGCAATAGTCTTAAACCCTTAGTGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR CCA 72 bp | GAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTaGCCTCAGTTTTATAGGCAACATGAAGCAGATGTG | + |
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Preference number: 3 (lower is better) Translates to: EGWGQNLCSFLS*PQFYRQHEADV Trigger: CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAAGCTCAAAGAAGGGACTaGAGCCGAGCTCCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKAQRRD*SRAPPC Trigger: GCAAGGAGGAGCTCGGCTCCAGTCCCTTCTTTGAGC...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATGCGGTGGTAGTCTTTTaGGCAGTAGGCCAGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYAVVVF*AVGQAT Trigger: AGTGGCCTGGCCTACTGCTCAAAAGACTACCACCGC...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATCAAGTCCCCCAGCATTaGGTCCAGAGATGCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYQVPQH*VQRCLV Trigger: CACAAGGCATCTCTGGACTCAATGCTGGGGGACTTG...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAAACTGAAACCTTGGCCTaGATTTCACTCAGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKTETLA*ISLRWA Trigger: GGCCCACCTGAGTGAAATGCAGGCCAAGGTTTCAGT...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAACCTCCTTGCAGTGAGTaGAGACAAAGTGCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKPPCSE*RQSALG Trigger: ACCCAGAGCACTTTGTCTGCACTCACTGCAAGGAGG...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAAAGCCGAGCTCCTCCTTaGAGTGAGTGCAGACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKSRAPP*SECRQS Trigger: ACTTTGTCTGCACTCACTGCAAGGAGGAGCTCGGCT...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCCAGCACTGGGCGGTTaGAGCCACCACATTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKPALGG*SHHIWV Trigger: CACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGG...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAAGGTGTCTGCTTTCACTaGAACCTTGGCCTGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKGVCFH*NLGLHF Trigger: GAAATGCAGGCCAAGGTTTCAGTGAAAGCAGACACC...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGACAAAGTGCTCTGGGTaGCAGGATTGCCCCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVTKCSG*QDCPRA Trigger: TGCTCTGGGGCAATCCTGGCACCCAGAGCACTTTGT...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAAGCACAGTAGCCCTTaGGGACTGTGGCAATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYKHSSP*GLWQSQ Trigger: TTGGGATTGCCACAGTCCCCAAGGGCTACTGTGCTT...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATCACCTTCCCAGCAATTaGCTTCTGGCAGGAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYHLPSN*LLAGST Trigger: TGTGCTTCCTGCCAGAAGCCAATTGCTGGGAAGGTG...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAATATTCCTCACTGTCCTaGAAGGTGCAGCGTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKYSSLS*KVQRSN Trigger: ATTGGAACGCTGCACCTTTCAGGACAGTGAGGAATA...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR GCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGACCAGCACTGGGCGGTTaGAGCCACCACATTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRPALGG*SHHIWV Trigger: CACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGG...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATTCTTGCTCTCCTCTGTaGATTGCTGATCCAGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYSCSPL*IADPGD Trigger: GTCACCTGGATCAGCAATCCACAGAGGAGAGCAAGA...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATTGGGCTCCTGGATATTaGTTGCATACACGAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYWAPGY*LHTRAA Trigger: TGCAGCTCGTGTATGCAACCAATATCCAGGAGCCCA...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR CCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGCAGCTGCTGAGGTTTTaGGAGGCAGGACTGATTCCT | + |
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Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVQLLRF*EAGLIP Trigger: AGGAATCAGTCCTGCCTCCCAAAACCTCAGCAGCTG...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR CCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATGATTGCCCCAGAGCATaGATCACCTTCCCAGCAATT | + |
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Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYDCPRA*ITFPAI Trigger: AATTGCTGGGAAGGTGATCCATGCTCTGGGGCAATC...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAATGCAGCCACCACATTTaGGTGAGAACATGGCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKCSHHI*VRTWLR Trigger: TCTTAGCCATGTTCTCACCCAAATGTGGTGGCTGCA...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCACAACTGAGCAGCTGCTaGGGTTTTGGGAGGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSQLSSC*GFGRQD Trigger: GTCCTGCCTCCCAAAACCTCAGCAGCTGCTCAGTTG...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR TCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGTCAGCACTTTATCTGTaGTGGGAGCAGCACAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVSALYL*WEQHSR Trigger: CCTACTGTGCTGCTCCCATCACAGATAAAGTGCTGA...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCCTCCTTGCAGTGAGTaGAGACAAAGTGCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKPPCSE*RQSALG Trigger: ACCCAGAGCACTTTGTCTGCACTCACTGCAAGGAGG...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAAAAGAAGTGCTCTGGGTaGCATGTCTTGTTCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKKKCSG*HVLFIA Trigger: AGCAATGAACAAGACATGGCACCCAGAGCACTTCTT...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGGATTGCCCCAGAGCATaGATCACCTTCCCAGCAATT | + |
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Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVDCPRA*ITFPAI Trigger: AATTGCTGGGAAGGTGATCCATGCTCTGGGGCAATC...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGCAGACAAAGTGCTCTaGGTGCCAGGATTGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSADKVL*VPGLPQ Trigger: CTGGGGCAATCCTGGCACCCAGAGCACTTTGTCTGC...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| 3UTR CAA 72 bp | AGAGAGAGTAAAACCCTGTGGCCCACATCTGAAGATTaGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RESKTLWPTSED*NGASAEVKGEK Trigger: TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCACAGGGTTTTACTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | AAGCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCCACTCAGGTGGGCCATaGGCTCATCCAACTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KLLYSSHVSVKIHFRLKSHSGGP*AHPTEQ Trigger: CTGCTCAGTTGGATGAGCTCATGGCCCACCTGAGTG...GCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR TCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGGGTGTCTGCTTTCACTaGAACCTTGGCCTGCATTTC | + |
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Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKGVCFH*NLGLHF Trigger: GAAATGCAGGCCAAGGTTTCAGTGAAAGCAGACACC...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCACAAGTCCCCCAGCATTaGGTCCAGAGATGCCTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSQVPQH*VQRCLV Trigger: CACAAGGCATCTCTGGACTCAATGCTGGGGGACTTG...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAATTCTTGTCCTTCTCATaGAAGCCTTCTGCACCAAAT | + |
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Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKFLSFS*KPSAPN Trigger: ATTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAA...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATCAGAAGAAAAACTACTaGAGCAGTCCCCACACACAA | + |
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Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYQKKNY*SSPHTQ Trigger: TTGTGTGTGGGGACTGCTTCAGTAGTTTTTCTTCTG...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGTGTTGTTCTGCTCCTTaGAGATGCCTTTCGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKCCSAP*RCLSAA Trigger: AGCTGCCGAAAGGCATCTTCAAGGAGCAGAACAACA...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR GCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGACAAAGCACTCTGGGTaGCAGACAGTGTTCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKTKHSG*QTVFMA Trigger: AGCCATGAACACTGTCTGGCACCCAGAGTGCTTTGT...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGTGCATTTCACTCAGGTaGGCCATGAGCTCATCCAAC | + |
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Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKCISLR*AMSSSN Trigger: GTTGGATGAGCTCATGGCCCACCTGAGTGAAATGCA...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR CCA 90 bp | AAGCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCGCAGACAAAGTGCTCTaGGTGCCAGGATTGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KLLYSSHVSVKIHFRLKSADKVL*VPGLPQ Trigger: CTGGGGCAATCCTGGCACCCAGAGCACTTTGTCTGC...GCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGGCAGAAGAAGTGCTCTaGGTGCCATGTCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVAEEVL*VPCLVH Trigger: ATGAACAAGACATGGCACCCAGAGCACTTCTTCTGC...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGAAGCTCCTCCTTGCAGTaGGTGCAGACAAAGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRSSSLQ*VQTKCS Trigger: AGAGCACTTTGTCTGCACTCACTGCAAGGAGGAGCT...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR TCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGGACAGTGTTCATGGCTaGAAGGTAGTTTTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKDSVHG*KVVFQH Trigger: GTGCTGGAAAACTACCTTTCAGCCATGAACACTGTC...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAACTGAAACCTTGGCCTaGATTTCACTCAGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSTETLA*ISLRWA Trigger: GGCCCACCTGAGTGAAATGCAGGCCAAGGTTTCAGT...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCACTGGCAAGGGTTTCCTaGTGGTGTCTGCTTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSLARVS*WCLLSL Trigger: CAGTGAAAGCAGACACCAGCAGGAAACCCTTGCCAG...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGAAGCCGAGCTCCTCCTTaGAGTGAGTGCAGACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRSRAPP*SECRQS Trigger: ACTTTGTCTGCACTCACTGCAAGGAGGAGCTCGGCT...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAACCATGTCTTGTTCATTaGTGTCAGCACTTTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WPTSEDLNGASAEVKGEKPCLVH*CQHFIC Trigger: ACAGATAAAGTGCTGACAGCAATGAACAAGACATGG...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGAAGGTCTTTGGAGTTTaGGGAATCTTGCTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVKVFGV*GILLSS Trigger: AGAGGAGAGCAAGATTCCCCAAACTCCAAAGACCTT...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCCTCACTGTAGACATTaGGCTCCTGGATATTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKPHCRH*APGYWL Trigger: CAACCAATATCCAGGAGCCCAATGTCTACAGTGAGG...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCACACCTTCCCAGCAATTaGCTTCTGGCAGGAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSHLPSN*LLAGST Trigger: TGTGCTTCCTGCCAGAAGCCAATTGCTGGGAAGGTG...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGATCCTTTCGGCAGTATaGCTTCTTGTCCTTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVILSAV*LLVLLM Trigger: CATGAGAAGGACAAGAAGCCATACTGCCGAAAGGAT...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATATTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYIWVRT*LRNPFG Trigger: GCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAAT...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAGTAGTTTTCCAGCACTaGGCGGTTGCAGCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQVVFQH*AVAATT Trigger: TGTGGTGGCTGCAACCGCCCAGTGCTGGAAAACTAC...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCGTAGTTTTCCAGCACTaGGCGGTTGCAGCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: KLLYSSHVSVKIHFRLKSVVFQH*AVAATT Trigger: TGTGGTGGCTGCAACCGCCCAGTGCTGGAAAACTAC...GCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGGCCAGACAGTGTTCATaGCTGAAAGGTAGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVARQCS*LKGSFP Trigger: TGGAAAACTACCTTTCAGCCATGAACACTGTCTGGC...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAAGCTCCTCCTTGCAGTaGGTGCAGACAAAGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQSSSLQ*VQTKCS Trigger: AGAGCACTTTGTCTGCACTCACTGCAAGGAGGAGCT...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCATGTTGTTCTGCTCCTTaGAGATGCCTTTCGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSCCSAP*RCLSAA Trigger: AGCTGCCGAAAGGCATCTTCAAGGAGCAGAACAACA...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGACACTGTCCTGAAAGGTaGAGCGTTCCAATTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRHCPER*SVPIPP Trigger: TGGAGGAATTGGAACGCTGCACCTTTCAGGACAGTG...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAAAGCACAGTAGCCCTTaGGGACTGTGGCAATCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQKHSSP*GLWQSQ Trigger: TTGGGATTGCCACAGTCCCCAAGGGCTACTGTGCTT...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGATTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVIWVRT*LRNPFG Trigger: GCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAAT...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR TCA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGACAAGAAACTGGATTTaGATATTCCTCACTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCSFLSWPQFYRQHEADVTRNWI*IFLTVL Trigger: CAGGACAGTGAGGAATATTCAAATCCAGTTTCTTGT...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCATGAGCTCATCCAACTaGGCAGCTGCTGAGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLYSSHVSVKIHFRLKSMSSSN*AAAEVL Trigger: CAAAACCTCAGCAGCTGCTCAGTTGGATGAGCTCAT...GCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGAAATACCTCTCCACAGTaGGAGCAGAAGAAGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRNTSPQ*EQKKCS Trigger: AGAGCACTTCTTCTGCTCTCACTGTGGAGAGGTATT...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAACAAAGCACTCTGGGTaGCAGACAGTGTTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQTKHSG*QTVFMA Trigger: AGCCATGAACACTGTCTGGCACCCAGAGTGCTTTGT...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGAGCAGAAGAAGTGCTCTaGGTGCCATGTCTTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRAEEVL*VPCLVH Trigger: ATGAACAAGACATGGCACCCAGAGCACTTCTTCTGC...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCATGCAGCCACCACATTTaGGTGAGAACATGGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSCSHHI*VRTWLR Trigger: TCTTAGCCATGTTCTCACCCAAATGTGGTGGCTGCA...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAGACAGTGTTCATGGCTaGAAGGTAGTTTTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQDSVHG*KVVFQH Trigger: GTGCTGGAAAACTACCTTTCAGCCATGAACACTGTC...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGACAGAAGAAAAACTACTaGAGCAGTCCCCACACACAA | + |
|
Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRQKKNY*SSPHTQ Trigger: TTGTGTGTGGGGACTGCTTCAGTAGTTTTTCTTCTG...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCGAGTTTGGGGAATCTTaGTCTCCTCTGTGGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLYSSHVSVKIHFRLKSEFGES*SPLWIA Trigger: AGCAATCCACAGAGGAGAGCAAGATTCCCCAAACTC...GCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAACTCCTGGATATTGGTTaGATACACGAGCTGCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQLLDIG*IHELHL Trigger: AAGGTGCAGCTCGTGTATGCAACCAATATCCAGGAG...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR GCA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCCATGTCTTGTTCATTaGTGTCAGCACTTTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DRIYALSYLGLSFIGNMKPCLVH*CQHFIC Trigger: ACAGATAAAGTGCTGACAGCAATGAACAAGACATGG...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGAATCCTTTCGGCAGTATaGCTTCTTGTCCTTCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRILSAV*LLVLLM Trigger: CATGAGAAGGACAAGAAGCCATACTGCCGAAAGGAT...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCATTCTTGTCCTTCTCATaGAAGCCTTCTGCACCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKRKPAVERTVHIRNIPSFLSFS*KPSAPN Trigger: ATTTGGTGCAGAAGGCTTTCATGAGAAGGACAAGAA...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAAAAGAAGTGCTCTGGGTaGCATGTCTTGTTCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQKKCSG*HVLFIA Trigger: AGCAATGAACAAGACATGGCACCCAGAGCACTTCTT...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAACTTTCACTGAAACCTTaGCCTGCATTTCACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AALFITCVSKNTLPLKKQLSLKP*PAFHSG Trigger: ACCTGAGTGAAATGCAGGCCAAGGTTTCAGTGAAAG...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCGCCAGACAGTGTTCATaGCTGAAAGGTAGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLLYSSHVSVKIHFRLKSARQCS*LKGSFP Trigger: TGGAAAACTACCTTTCAGCCATGAACACTGTCTGGC...GCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS TCA 90 bp | AGCACAGTAGGCACAGCGTGGAGAGAACAGGCGGTGGTAGTCTTTTaGGCAGTAGGCCAGGCCACTCCGCTCAAAGAAGGGACTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: STVGTAWREQAVVVF*AVGQATPLKEGTGA Trigger: GGCTCCAGTCCCTTCTTTGAGCGGAGTGGCCTGGCCTACTGCTCAAAAGACTACCACCGCCTGTTCTCTCCACGCTGTGCCTACTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 90 bp | ACTGGAGCCGAGCTCCTCCTTGCAGTGAGTGCAGACAAAGTGCTCTaGGTGCCAGGATTGCCCCAGAGCATGGATCACCTTCCCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TGAELLLAVSADKVL*VPGLPQSMDHLPSN Trigger: ATTGCTGGGAAGGTGATCCATGCTCTGGGGCAATCCTGGCACCCAGAGCACTTTGTCTGCACTCACTGCAAGGAGGAGCTCGGCTCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 90 bp | AGTCTTTTGAGCAGTAGGCCAGGCCACTCCGCTCAAAGAAGGGACTaGAGCCGAGCTCCTCCTTGCAGTGAGTGCAGACAAAGTGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLSSRPGHSAQRRD*SRAPPCSECRQSAL Trigger: CAGAGCACTTTGTCTGCACTCACTGCAAGGAGGAGCTCGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCCTGGCCTACTGCTCAAAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS TCA 90 bp | ACCTTGGCCTGCATTTCACTCAGGTGGGCCATGAGCTCATCCAACTaGGCAGCTGCTGAGGTTTTGGGAGGCAGGACTGATTCCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLACISLRWAMSSSN*AAAEVLGGRTDSFG Trigger: GCCAAAGGAATCAGTCCTGCCTCCCAAAACCTCAGCAGCTGCTCAGTTGGATGAGCTCATGGCCCACCTGAGTGAAATGCAGGCCAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS TCA 90 bp | CTGCTTTCACTGAAACCTTGGCCTGCATTTCACTCAGGTGGGCCATaGGCTCATCCAACTGAGCAGCTGCTGAGGTTTTGGGAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLSLKPWPAFHSGGP*AHPTEQLLRFWEAG Trigger: TCCTGCCTCCCAAAACCTCAGCAGCTGCTCAGTTGGATGAGCTCATGGCCCACCTGAGTGAAATGCAGGCCAAGGTTTCAGTGAAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS TCA 90 bp | ATCCTGCTGGTCTGGCAAGGGTTTCCTGCTGGTGTCTGCTTTCACTaGAACCTTGGCCTGCATTTCACTCAGGTGGGCCATGAGCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ILLVWQGFPAGVCFH*NLGLHFTQVGHELI Trigger: GATGAGCTCATGGCCCACCTGAGTGAAATGCAGGCCAAGGTTTCAGTGAAAGCAGACACCAGCAGGAAACCCTTGCCAGACCAGCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS TCA 90 bp | AGTTCCTGTTCCAAGTCCCCCAGCATTGAGTCCAGAGATGCCTTGTaGTCCTGCTGGTCTGGCAAGGGTTTCCTGCTGGTGTCTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSKSPSIESRDAL*SCWSGKGFLLVSAF Trigger: GAAAGCAGACACCAGCAGGAAACCCTTGCCAGACCAGCAGGATCACAAGGCATCTCTGGACTCAATGCTGGGGGACTTGGAACAGGAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 90 bp | CAGCAATTGGCTTCTGGCAGGAAGCACAGTAGCCCTTGGGGACTGTaGCAATCCCAAGATCTTGTAGTTCCTGTTCCAAGTCCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QQLASGRKHSSPWGL*QSQDLVVPVPSPPA Trigger: TGCTGGGGGACTTGGAACAGGAACTACAAGATCTTGGGATTGCCACAGTCCCCAAGGGCTACTGTGCTTCCTGCCAGAAGCCAATTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 90 bp | CCAGAGATGCCTTGTGATCCTGCTGGTCTGGCAAGGGTTTCCTGCTaGTGTCTGCTTTCACTGAAACCTTGGCCTGCATTTCACTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PEMPCDPAGLARVSC*CLLSLKPWPAFHSG Trigger: ACCTGAGTGAAATGCAGGCCAAGGTTTCAGTGAAAGCAGACACCAGCAGGAAACCCTTGCCAGACCAGCAGGATCACAAGGCATCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS GCA 90 bp | TGGCTCTTGGACCTCACTGTAGACATTGGGCTCCTGGATATTGGTTaGATACACGAGCTGCACCTTCAAGGGACTTGTGTTACCCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WLLDLTVDIGLLDIG*IHELHLQGTCVTLR Trigger: TCGCAGGGTAACACAAGTCCCTTGAAGGTGCAGCTCGTGTATGCAACCAATATCCAGGAGCCCAATGTCTACAGTGAGGTCCAAGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS GCA 90 bp | AGTCCAGAGATGCCTTGTGATCCTGCTGGTCTGGCAAGGGTTTCCTaGTGGTGTCTGCTTTCACTGAAACCTTGGCCTGCATTTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPEMPCDPAGLARVS*WCLLSLKPWPAFHS Trigger: TGAGTGAAATGCAGGCCAAGGTTTCAGTGAAAGCAGACACCAGCAGGAAACCCTTGCCAGACCAGCAGGATCACAAGGCATCTCTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 90 bp | TCACCTTCCCAGCAATTGGCTTCTGGCAGGAAGCACAGTAGCCCTTaGGGACTGTGGCAATCCCAAGATCTTGTAGTTCCTGTTCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SPSQQLASGRKHSSP*GLWQSQDLVVPVPS Trigger: ACTTGGAACAGGAACTACAAGATCTTGGGATTGCCACAGTCCCCAAGGGCTACTGTGCTTCCTGCCAGAAGCCAATTGCTGGGAAGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAACTCTGGGTGCCAGGATaGCCCCAGAGCATGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: WPTSEDLNGASAEVKGEKLWVPG*PQSMDH Trigger: GTGATCCATGCTCTGGGGCAATCCTGGCACCCAGAG...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCCACATCTGAAGATTTGAATGGAGCATCAGCAGAGGTCAAAGGTGAGAAAGGCGGTGGTAGTCTTTaGAGCAGTAGGCCAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WPTSEDLNGASAEVKGEKGGGSL*SSRPGH Trigger: GTGGCCTGGCCTACTGCTCAAAAGACTACCACCGCC...TTTCTCACCTTTGACCTCTGCTGATGCTCCATTCAAATCTTCAGATGTGGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 90 bp | TTTCCAGCACTGGGCGGTTGCAGCCACCACATTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGCAGTATGGCTTCTTGTCCTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FPALGGCSHHIWVRT*LRNPFGSMASCPSH Trigger: ATGAGAAGGACAAGAAGCCATACTGCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 90 bp | CTGAAAGGTAGTTTTCCAGCACTGGGCGGTTGCAGCCACCACATTTaGGTGAGAACATGGCTAAGAAATCCTTTCGGCAGTATGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LKGSFPALGGCSHHI*VRTWLRNPFGSMAS Trigger: AGAAGCCATACTGCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGGAAAACTACCTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS GCA 90 bp | AGACAGTGTTCATGGCTGAAAGGTAGTTTTCCAGCACTGGGCGGTTaGAGCCACCACATTTGGGTGAGAACATGGCTAAGAAATCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQCSWLKGSFPALGG*SHHIWVRTWLRNPF Trigger: GAAAGGATTTCTTAGCCATGTTCTCACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGGAAAACTACCTTTCAGCCATGAACACTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGTCCAGCACTGGGCGGTaGCAGCCACCACATTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DRIYALSYLGLSFIGNMKSSTGR*QPPHLG Trigger: ACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGGA...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS TCA 90 bp | GCTCTCCTCTGTGGATTGCTGATCCAGGTGACAAGAAACTGGATTTaGATATTCCTCACTGTCCTGAAAGGTGCAGCGTTCCAATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALLCGLLIQVTRNWI*IFLTVLKGAAFQFL Trigger: GAGGAATTGGAACGCTGCACCTTTCAGGACAGTGAGGAATATTCAAATCCAGTTTCTTGTCACCTGGATCAGCAATCCACAGAGGAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS GCA 90 bp | TTGTGTTACCCTGCGATGACAAGGTCTTTGGAGTTTGGGGAATCTTaGTCTCCTCTGTGGATTGCTGATCCAGGTGACAAGAAACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LCYPAMTRSLEFGES*SPLWIADPGDKKLD Trigger: ATCCAGTTTCTTGTCACCTGGATCAGCAATCCACAGAGGAGAGCAAGATTCCCCAAACTCCAAAGACCTTGTCATCGCAGGGTAACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CAA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGGCAGCTGCTGAGGTTTaGGGAGGCAGGACTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: DRIYALSYLGLSFIGNMKAAAEV*GGRTDS Trigger: GGAATCAGTCCTGCCTCCCAAAACCTCAGCAGCTGC...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CAA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGCCAAGTCCCCCAGCATaGAGTCCAGAGATGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LCSFLSWPQFYRQHEADVPSPPA*SPEMPC Trigger: ACAAGGCATCTCTGGACTCAATGCTGGGGGACTTGG...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | CTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCAGATGTGTCACCTTCCCAGCAATaGGCTTCTGGCAGGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCSFLSWPQFYRQHEADVSPSQQ*ASGRKH Trigger: GTGCTTCCTGCCAGAAGCCAATTGCTGGGAAGGTGA...CACATCTGCTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATCAAGGTCTTTGGAGTTaGGGGAATCTTGCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYQGLWS*GNLALL Trigger: GAGGAGAGCAAGATTCCCCAAACTCCAAAGACCTTG...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CAA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGCCAAGTCCCCCAGCATaGAGTCCAGAGATGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DRIYALSYLGLSFIGNMKPSPPA*SPEMPC Trigger: ACAAGGCATCTCTGGACTCAATGCTGGGGGACTTGG...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGACTCTGGGTGCCAGGATaGCCCCAGAGCATGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRLWVPG*PQSMDH Trigger: GTGATCCATGCTCTGGGGCAATCCTGGCACCCAGAG...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGGCGGTGGTAGTCTTTaGAGCAGTAGGCCAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RKRKPAVERTVHIRNIPSGGGSL*SSRPGH Trigger: GTGGCCTGGCCTACTGCTCAAAAGACTACCACCGCC...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGATCCAGCACTGGGCGGTaGCAGCCACCACATTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRSSTGR*QPPHLG Trigger: ACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGGA...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGATCACCTTCCCAGCAATaGGCTTCTGGCAGGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRSPSQQ*ASGRKH Trigger: GTGCTTCCTGCCAGAAGCCAATTGCTGGGAAGGTGA...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGAGCTCCTGGATATTGGTaGCATACACGAGCTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRAPGYW*HTRAAP Trigger: AGGTGCAGCTCGTGTATGCAACCAATATCCAGGAGC...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGCAGGACTGATTCCTTaGGCTCTTGGACCTCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RKRKPAVERTVHIRNIPSAGLIP*ALGPHC Trigger: ACAGTGAGGTCCAAGAGCCAAAGGAATCAGTCCTGC...TGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGGCTGGGGACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATGACAAGAAACTGGATTaGAATATTCCTCACTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TEGWGQNLCSFLSWPQFYDKKLD*NIPHCP Trigger: AGGACAGTGAGGAATATTCAAATCCAGTTTCTTGTC...ATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTCCCCAGCCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS-3UTR CAA 90 bp | GCTGCTTTATTCATCACATGTGTCAGTAAAAATACACTTCCGCTTAAAAAGCAATTGGGCTCCTGGATATaGGTTGCATACACGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AALFITCVSKNTLPLKKQLGSWI*VAYTSC Trigger: GCAGCTCGTGTATGCAACCAATATCCAGGAGCCCAA...TTGCTTTTTAAGCGGAAGTGTATTTTTACTGACACATGTGATGAATAAAGCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS-3UTR CAA 90 bp | GACAGAATCTATGCTCTTTCCTATCTTGGCCTCAGTTTTATAGGCAACATGAAGGCCATGTCTTGTTCATaGCTGTCAGCACTTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DRIYALSYLGLSFIGNMKAMSCS*LSALYL Trigger: CAGATAAAGTGCTGACAGCAATGAACAAGACATGGC...CTTCATGTTGCCTATAAAACTGAGGCCAAGATAGGAAAGAGCATAGATTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGAAAACCAGCAGTGGAAAGAACTGTGCACATAAGAAATATACCTTCAGAGCCATGTCTTGTTCATaGCTGTCAGCACTTTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KEKTSSGKNCAHKKYTFRAMSCS*LSALYL Trigger: CAGATAAAGTGCTGACAGCAATGAACAAGACATGGC...TCTGAAGGTATATTTCTTATGTGCACAGTTCTTTCCACTGCTGGTTTTCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS CCA 72 bp | AGCAGTAGGCCAGGCCACTCCGCTCAAAGAAGGGACTaGAGCCGAGCTCCTCCTTGCAGTGAGTGCAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: SSRPGHSAQRRD*SRAPPCSECRQ Trigger: TTGTCTGCACTCACTGCAAGGAGGAGCTCGGCTCCAGTCCCTTCTTTGAGCGGAGTGGCCTGGCCTACTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS CAA 90 bp | CAGCACAGTAGGCACAGCGTGGAGAGAACAGGCGGTGGTAGTCTTTaGAGCAGTAGGCCAGGCCACTCCGCTCAAAGAAGGGACTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QHSRHSVERTGGGSL*SSRPGHSAQRRDWS Trigger: GCTCCAGTCCCTTCTTTGAGCGGAGTGGCCTGGCCTACTGCTCAAAAGACTACCACCGCCTGTTCTCTCCACGCTGTGCCTACTGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS CCA 72 bp | GGATTGCCCCAGAGCATGGATCACCTTCCCAGCAATTaGCTTCTGGCAGGAAGCACAGTAGCCCTTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLPQSMDHLPSN*LLAGSTVALGD Trigger: GTCCCCAAGGGCTACTGTGCTTCCTGCCAGAAGCCAATTGCTGGGAAGGTGATCCATGCTCTGGGGCAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS TCA 72 bp | TCCAAGTCCCCCAGCATTGAGTCCAGAGATGCCTTGTaGTCCTGCTGGTCTGGCAAGGGTTTCCTGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SKSPSIESRDAL*SCWSGKGFLLV Trigger: CACCAGCAGGAAACCCTTGCCAGACCAGCAGGATCACAAGGCATCTCTGGACTCAATGCTGGGGGACTTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
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| CDS TCA 72 bp | TGCATTTCACTCAGGTGGGCCATGAGCTCATCCAACTaGGCAGCTGCTGAGGTTTTGGGAGGCAGGACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CISLRWAMSSSN*AAAEVLGGRTD Trigger: ATCAGTCCTGCCTCCCAAAACCTCAGCAGCTGCTCAGTTGGATGAGCTCATGGCCCACCTGAGTGAAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS TCA 72 bp | CTGAAACCTTGGCCTGCATTTCACTCAGGTGGGCCATaGGCTCATCCAACTGAGCAGCTGCTGAGGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LKPWPAFHSGGP*AHPTEQLLRFW Trigger: CCAAAACCTCAGCAGCTGCTCAGTTGGATGAGCTCATGGCCCACCTGAGTGAAATGCAGGCCAAGGTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS GCA 72 bp | ATGCCTTGTGATCCTGCTGGTCTGGCAAGGGTTTCCTaGTGGTGTCTGCTTTCACTGAAACCTTGGCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MPCDPAGLARVS*WCLLSLKPWPA Trigger: TGCAGGCCAAGGTTTCAGTGAAAGCAGACACCAGCAGGAAACCCTTGCCAGACCAGCAGGATCACAAGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CAA 72 bp | CAGCTGCTGAGGTTTTGGGAGGCAGGACTGATTCCTTaGGCTCTTGGACCTCACTGTAGACATTGGGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QLLRFWEAGLIP*ALGPHCRHWAP Trigger: AGGAGCCCAATGTCTACAGTGAGGTCCAAGAGCCAAAGGAATCAGTCCTGCCTCCCAAAACCTCAGCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS CCA 72 bp | CCTTGTGATCCTGCTGGTCTGGCAAGGGTTTCCTGCTaGTGTCTGCTTTCACTGAAACCTTGGCCTGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: PCDPAGLARVSC*CLLSLKPWPAF Trigger: AAATGCAGGCCAAGGTTTCAGTGAAAGCAGACACCAGCAGGAAACCCTTGCCAGACCAGCAGGATCACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 72 bp | GCTTCTGGCAGGAAGCACAGTAGCCCTTGGGGACTGTaGCAATCCCAAGATCTTGTAGTTCCTGTTCCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASGRKHSSPWGL*QSQDLVVPVPS Trigger: ACTTGGAACAGGAACTACAAGATCTTGGGATTGCCACAGTCCCCAAGGGCTACTGTGCTTCCTGCCAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 72 bp | CAGCAATTGGCTTCTGGCAGGAAGCACAGTAGCCCTTaGGGACTGTGGCAATCCCAAGATCTTGTAGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QQLASGRKHSSP*GLWQSQDLVVP Trigger: AGGAACTACAAGATCTTGGGATTGCCACAGTCCCCAAGGGCTACTGTGCTTCCTGCCAGAAGCCAATTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CAA 90 bp | TGGCAATCCCAAGATCTTGTAGTTCCTGTTCCAAGTCCCCCAGCATaGAGTCCAGAGATGCCTTGTGATCCTGCTGGTCTGGCAAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WQSQDLVVPVPSPPA*SPEMPCDPAGLARV Trigger: AACCCTTGCCAGACCAGCAGGATCACAAGGCATCTCTGGACTCAATGCTGGGGGACTTGGAACAGGAACTACAAGATCTTGGGATTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CAA 90 bp | GCTGCACCTTCAAGGGACTTGTGTTACCCTGCGATGACAAGGTCTTaGGAGTTTGGGGAATCTTGCTCTCCTCTGTGGATTGCTGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: AAPSRDLCYPAMTRS*EFGESCSPLWIADP Trigger: TGGATCAGCAATCCACAGAGGAGAGCAAGATTCCCCAAACTCCAAAGACCTTGTCATCGCAGGGTAACACAAGTCCCTTGAAGGTGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS TCA 72 bp | GAGCTGCACCTTCAAGGGACTTGTGTTACCCTGCGATaGCAAGGTCTTTGGAGTTTGGGGAATCTTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELHLQGTCVTLR*QGLWSLGNLAL Trigger: GAGAGCAAGATTCCCCAAACTCCAAAGACCTTGTCATCGCAGGGTAACACAAGTCCCTTGAAGGTGCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS GCA 72 bp | ACATTGGGCTCCTGGATATTGGTTGCATACACGAGCTaGACCTTCAAGGGACTTGTGTTACCCTGCGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: TLGSWILVAYTS*TFKGLVLPCDD Trigger: GTCATCGCAGGGTAACACAAGTCCCTTGAAGGTGCAGCTCGTGTATGCAACCAATATCCAGGAGCCCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS CCA 72 bp | CTTGGACCTCACTGTAGACATTGGGCTCCTGGATATTaGTTGCATACACGAGCTGCACCTTCAAGGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGPHCRHWAPGY*LHTRAAPSRDL Trigger: CAAGTCCCTTGAAGGTGCAGCTCGTGTATGCAACCAATATCCAGGAGCCCAATGTCTACAGTGAGGTCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS CCA 72 bp | CTGGGCGGTTGCAGCCACCACATTTGGGTGAGAACATaGCTAAGAAATCCTTTCGGCAGTATGGCTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LGGCSHHIWVRT*LRNPFGSMASC Trigger: ACAAGAAGCCATACTGCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAATGTGGTGGCTGCAACCGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CCA 72 bp | AGTTTTCCAGCACTGGGCGGTTGCAGCCACCACATTTaGGTGAGAACATGGCTAAGAAATCCTTTCGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFPALGGCSHHI*VRTWLRNPFGS Trigger: ACTGCCGAAAGGATTTCTTAGCCATGTTCTCACCCAAATGTGGTGGCTGCAACCGCCCAGTGCTGGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CAA 72 bp | GGACCTCACTGTAGACATTGGGCTCCTGGATATTGGTaGCATACACGAGCTGCACCTTCAAGGGACTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GPHCRHWAPGYW*HTRAAPSRDLC Trigger: ACACAAGTCCCTTGAAGGTGCAGCTCGTGTATGCAACCAATATCCAGGAGCCCAATGTCTACAGTGAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
||
| CDS CAA 72 bp | CAAGATCTTGTAGTTCCTGTTCCAAGTCCCCCAGCATaGAGTCCAGAGATGCCTTGTGATCCTGCTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDLVVPVPSPPA*SPEMPCDPAGL Trigger: CAGACCAGCAGGATCACAAGGCATCTCTGGACTCAATGCTGGGGGACTTGGAACAGGAACTACAAGATCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025601.8 ENSMUST00000235690.2 |
||
| CDS CAA 90 bp | GCTCCTGGATATTGGTTGCATACACGAGCTGCACCTTCAAGGGACTaGTGTTACCCTGCGATGACAAGGTCTTTGGAGTTTGGGGAATCT | + |
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Preference number: 6 (lower is better) Translates to: APGYWLHTRAAPSRD*CYPAMTRSLEFGES Trigger: AGATTCCCCAAACTCCAAAGACCTTGTCATCGCAGGGTAACACAAGTCCCTTGAAGGTGCAGCTCGTGTATGCAACCAATATCCAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS GCA 72 bp | TACACGAGCTGCACCTTCAAGGGACTTGTGTTACCCTaGGATGACAAGGTCTTTGGAGTTTGGGGAATCTTG | + |
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Preference number: 6 (lower is better) Translates to: YTSCTFKGLVLP*DDKVFGVWGIL Trigger: CAAGATTCCCCAAACTCCAAAGACCTTGTCATCGCAGGGTAACACAAGTCCCTTGAAGGTGCAGCTCGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS GCA 72 bp | GACCTCACTGTAGACATTGGGCTCCTGGATATTGGTTaGATACACGAGCTGCACCTTCAAGGGACTTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: DLTVDIGLLDIG*IHELHLQGTCV Trigger: AACACAAGTCCCTTGAAGGTGCAGCTCGTGTATGCAACCAATATCCAGGAGCCCAATGTCTACAGTGAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS CAA 90 bp | TGCTCTCCTCTGTGGATTGCTGATCCAGGTGACAAGAAACTGGATTaGAATATTCCTCACTGTCCTGAAAGGTGCAGCGTTCCAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: CSPLWIADPGDKKLD*NIPHCPERCSVPIP Trigger: AGGAATTGGAACGCTGCACCTTTCAGGACAGTGAGGAATATTCAAATCCAGTTTCTTGTCACCTGGATCAGCAATCCACAGAGGAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS CCA 72 bp | AGGTCTTTGGAGTTTGGGGAATCTTGCTCTCCTCTGTaGATTGCTGATCCAGGTGACAAGAAACTGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: RSLEFGESCSPL*IADPGDKKLDL Trigger: CAAATCCAGTTTCTTGTCACCTGGATCAGCAATCCACAGAGGAGAGCAAGATTCCCCAAACTCCAAAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS TCA 72 bp | TGTGGATTGCTGATCCAGGTGACAAGAAACTGGATTTaGATATTCCTCACTGTCCTGAAAGGTGCAGCGTTC | + |
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Preference number: 6 (lower is better) Translates to: CGLLIQVTRNWI*IFLTVLKGAAF Trigger: GAACGCTGCACCTTTCAGGACAGTGAGGAATATTCAAATCCAGTTTCTTGTCACCTGGATCAGCAATCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS CAA 72 bp | CTGTGGATTGCTGATCCAGGTGACAAGAAACTGGATTaGAATATTCCTCACTGTCCTGAAAGGTGCAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: LWIADPGDKKLD*NIPHCPERCSV Trigger: AACGCTGCACCTTTCAGGACAGTGAGGAATATTCAAATCCAGTTTCTTGTCACCTGGATCAGCAATCCACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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| CDS GCA 72 bp | AAACTGGATTTGAATATTCCTCACTGTCCTGAAAGGTaGAGCGTTCCAATTCCTCCAATAAGGCATCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KLDLNIPHCPER*SVPIPPIRHPA Trigger: AGCTGGATGCCTTATTGGAGGAATTGGAACGCTGCACCTTTCAGGACAGTGAGGAATATTCAAATCCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025601.8 |
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