Pregenerated sensors for LPO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009356Ensembl transcript IDs: ENSMUST00000103177.10, ENSMUST00000136446.3
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CATGCTAAGTGCCACAAGTCGTACTCACAAGGCAGGCAGAGGTCTTaGACTCAGGATGCTTATGAGCTAGTCTTAGAGGACGGGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: HAKCHKSYSQGRQRS*TQDAYELVLEDGRK Trigger: TTTCCTCCCGTCCTCTAAGACTAGCTCATAAGCATCCTGAGTCAAAGACCTCTGCCTGCCTTGTGAGTACGACTTGTGGCACTTAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| 3UTR-3UTR CCA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCAAAGGAGTAGGTCACTaGAACTGTTTGAAATGGCAT | + |
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Preference number: 2 (lower is better) Translates to: GRQCLTSWKDILRSLSLVKGVGH*NCLKWH Trigger: ATGCCATTTCAAACAGTTCCAGTGACCTACTCCTTT...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACCAGTGTCTGACAAGCTaGAAGGACATCTTAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: CLLSISCVEHHAKCHKSYQCLTS*KDILRS Trigger: GCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTG...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| 3UTR TCA 72 bp | AAGGCCTGCCCCAGGAGGGGACAGCCTGATGTTTATTaGGCATTTCGTGTGTTGAACACCATGCTAAGTGCC | + |
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Preference number: 3 (lower is better) Translates to: KACPRRGQPDVY*AFRVLNTMLSA Trigger: GGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACATCAGGCTGTCCCCTCCTGGGGCAGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| 3UTR CCA 72 bp | CTCATTCAGGGAGAGGGTAGGCAGTGTCTGACAAGCTaGAAGGACATCTTAAGAAGCCTAAGTCTCGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LIQGEGRQCLTS*KDILRSLSLVR Trigger: CCTGACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACCCTCTCCCTGAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| 3UTR GCA 72 bp | TTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTaGCACAAGTCGTACTCACAAGGCAGGCAGAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: LLSISCVEHHAK*HKSYSQGRQRS Trigger: AGACCTCTGCCTGCCTTGTGAGTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| 3UTR-3UTR CAA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACGGTCACTGGAACTGTTaGAAATGGCATCTCGGACCA | + |
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Preference number: 3 (lower is better) Translates to: CLLSISCVEHHAKCHKSYGHWNC*KWHLGP Trigger: TGGTCCGAGATGCCATTTCAAACAGTTCCAGTGACC...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCCCCACCCGACCCCTGTaGACCAGGGGTTCAGCGACG | + |
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Preference number: 4 (lower is better) Translates to: IKVKGHSLSQCSFRERVGPTRPL*TRGSAT Trigger: CGTCGCTGAACCCCTGGTCCACAGGGGTCGGGTGGG...GCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | AAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCAGGAGACTTCACGGGGCTaGGGGAGAGGGAAGCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: KGQRPQPQPVLIQGEGRQETSRG*GRGKPF Trigger: GAACGGCTTCCCTCTCCCGCAGCCCCGTGAAGTCTC...CTGCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | TCAAGGCCTGCCCCAGGAGGGGACAGCCTGATGTTTATTGAGCATTTCGTGTGTGGCTCGGGAGTCCCCTaGCAAGAAGCAGGGCACACC | + |
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Preference number: 4 (lower is better) Translates to: SRPAPGGDSLMFIEHFVCGSGVP*QEAGHT Trigger: GGTGTGCCCTGCTTCTTGGCAGGGGACTCCCGAGCC...ACACACGAAATGCTCAATAAACATCAGGCTGTCCCCTCCTGGGGCAGGCCTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | GTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCAGTGTCCCAGCCTCCAGGTGTTaGAAAAGACAGTGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VKGHSLSQCSFRERVGSVPASRC*KRQCAG Trigger: CCCTGCACACTGTCTTTTTCAACACCTGGAGGCTGG...GACACTGCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | ATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCGACTCTTCCCACACCTaGCCACTCCGGATGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: IKVKGHSLSQCSFRERVGDSSHT*PLRMAV Trigger: CACAGCCATCCGGAGTGGGCAGGTGTGGGAAGAGTC...GCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | GGAGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGCACTCCGGATGGCTGTaGGTGTCCGGCCTTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GGNIKVKGHSLSQCSFREHSGWL*VSGLWH Trigger: ATGCCAAAGGCCGGACACGCACAGCCATCCGGAGTG...CTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | GTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCAGTGTCGGGGGAATCCACTTCTaGATCTCATCACCCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: VKGHSLSQCSFRERVGSVGGIHF*ISSPSR Trigger: CCTACTGGGTGATGAGATGCAGAAGTGGATTCCCCC...GACACTGCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | GGGAGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGTGGCCAACAAGATCTaGTCTGAGGCTCGGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: GRKHKGQRPQPQPVLIQGVANKI*SEARES Trigger: GGACTCCCGAGCCTCAGAGCAGATCTTGTTGGCCAC...TCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | GGAGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGCATGGATCTCTTCTaGTCCAGAACGTCCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: GGNIKVKGHSLSQCSFRESMDLF*SRTSSS Trigger: TGAGGAGGACGTTCTGGACCAGAAGAGATCCATGCT...CTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | TCAAGGCCTGCCCCAGGAGGGGACAGCCTGATGTTTATTGAGCATTTCGTGTGTTTTAGGGTCACCAGGTaGGAACATGATGGGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SRPAPGGDSLMFIEHFVCFRVTR*EHDGEA Trigger: TGCTTCCCCATCATGTTCCCACCTGGTGACCCTAAA...ACACACGAAATGCTCAATAAACATCAGGCTGTCCCCTCCTGGGGCAGGCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | GGAGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGCAGGGATTTATAGGGTaGTGTGGGGCAGACAAATCC | + |
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Preference number: 4 (lower is better) Translates to: GGNIKVKGHSLSQCSFREQGFIG*CGADKS Trigger: GGATTTGTCTGCCCCACACCACCCTATAAATCCCTG...CTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCCGGATAAAGAGTGTGTaGGATGTGGCCAACAAGATC | + |
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Preference number: 4 (lower is better) Translates to: IKVKGHSLSQCSFRERVGRIKSV*DVANKI Trigger: GATCTTGTTGGCCACATCCCACACACTCTTTATCCG...GCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | TCAAGGCCTGCCCCAGGAGGGGACAGCCTGATGTTTATTGAGCATTTCGTGTGTGGTCCATCAGCTTCTTaGCCAGCACCTCGTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SRPAPGGDSLMFIEHFVCGPSAS*PAPRFS Trigger: TGAAAAACGAGGTGCTGGCCAAGAAGCTGATGGACC...ACACACGAAATGCTCAATAAACATCAGGCTGTCCCCTCCTGGGGCAGGCCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | GGAGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGACAAATCCAGCTCTaGAGAAAGGCATGCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: GGNIKVKGHSLSQCSFRERQIQL*RKACTS Trigger: GGAAGTGCATGCCTTTCTTCAGAGCTGGATTTGTCT...CTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACCCCGTCCTCGTATTCTaGGGGCAGCCATCGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CLLSISCVEHHAKCHKSYPVLVF*GQPSSQ Trigger: CTGGCTCGATGGCTGCCCGCAGAATACGAGGACGGG...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | GCTAAGTGCCACAAGTCGTACTCACAAGGCAGGCAGAGGTCTTTGACTCAGGATGGCCTTTGGCATGCTTaGGATAATCTGACAGATGAC | + |
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Preference number: 4 (lower is better) Translates to: AKCHKSYSQGRQRSLTQDGLWHA*DNLTDD Trigger: GTCATCTGTCAGATTATCTCAAGCATGCCAAAGGCC...ATCCTGAGTCAAAGACCTCTGCCTGCCTTGTGAGTACGACTTGTGGCACTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCTGTTACAGTATCCAGTaGTGGTCCGGTAAGGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GRQCLTSWKDILRSLSLVCYSIQ*WSGKGY Trigger: GTAGCCCTTACCGGACCATCACTGGATACTGTAACA...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | AGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGAAGCAGTTGTCTCCCTaGATACAGTGTTCGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: RKHKGQRPQPQPVLIQGEKQLSP*IQCSSH Trigger: GTGTGACGAACACTGTATCCAGGGAGACAACTGCTT...CTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAAGTCTGCTTAGTTCTGTaGCCAACCGGTTGTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PLASVSNLKGVGHWNCLKVCLVL*PTGCAP Trigger: GGGAGCACAACCGGTTGGCCACAGAACTAAGCAGAC...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | CTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAATGGCATCTCGGACCATGGACGTCAAGTCCAGGCCTTaGCCTGTGACATTGGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LKRSRSLELFEMASRTMDVKSRP*PVTLVR Trigger: TCTCACCAATGTCACAGGTCAAGGCCTGGACTTGAC...GTCCATGGTCCGAGATGCCATTTCAAACAGTTCCAGTGACCTACTCCTTTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCGTTAGAGCATTGATCTaGTCTCGGGCCAGGGATTTA | + |
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Preference number: 4 (lower is better) Translates to: GRQCLTSWKDILRSLSLVVRALI*SRARDL Trigger: TAAATCCCTGGCCCGAGAGCAGATCAATGCTCTAAC...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | AGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGGTGCTATGTATCTTaGTTGTCATGGCCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RKHKGQRPQPQPVLIQGEGCYVS*LSWPSS Trigger: TGAAGATGGCCATGACAACCAAGATACATAGCACCC...CTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCTCAACTTGGCATTCTTaGCCAACAGACCTCGAACCA | + |
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Preference number: 4 (lower is better) Translates to: GRQCLTSWKDILRSLSLVSTWHS*PTDLEP Trigger: TGGTTCGAGGTCTGTTGGCCAAGAATGCCAAGTTGA...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACCACCAGGTGGGAACATaGTGGGGAAGCAGTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: CLLSISCVEHHAKCHKSYHQVGT*WGSSCL Trigger: GAGACAACTGCTTCCCCATCATGTTCCCACCTGGTG...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCTCCCATGATTTTCCTTaGTTCCTGATAGAGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GRQCLTSWKDILRSLSLVSHDFP*FLIERL Trigger: GAGACGCTCTATCAGGAAGCAAGGAAAATCATGGGA...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAAGTATCTTGGTTGTCATaGCCATCTTCAGCCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: PLASVSNLKGVGHWNCLKVSWLS*PSSACP Trigger: GGGACAGGCTGAAGATGGCCATGACAACCAAGATAC...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAAAGAGTGTGTGGGATGTaGCCAACAAGATCTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PLASVSNLKGVGHWNCLKRVCGM*PTRSAL Trigger: CAGAGCAGATCTTGTTGGCCACATCCCACACACTCT...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCATTGTAGCCTTGGTATaGGGGAATCCACTTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: GRQCLTSWKDILRSLSLVIVALV*GNPLLH Trigger: ATGCAGAAGTGGATTCCCCCATACCAAGGCTACAAT...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCACATTGGTGAGAAACTaGGACAGTTTCTTTAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GRQCLTSWKDILRSLSLVTLVRN*DSFFRD Trigger: GTCCCTAAAGAAACTGTCTCAGTTTCTCACCAATGT...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACGTGGGACCTTGTCGATaGCAGTGTTGTCACAGACCA | + |
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Preference number: 4 (lower is better) Translates to: CLLSISCVEHHAKCHKSYVGPCR*QCCHRP Trigger: TGGTCTGTGACAACACTGGCATCGACAAGGTCCCAC...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR TCA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAAAGCGTAAAGCAAAGGTaGAGACATTGGAAATTCGGG | + |
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Preference number: 4 (lower is better) Translates to: PLASVSNLKGVGHWNCLKSVKQR*RHWKFG Trigger: CCCGAATTTCCAATGTCTTCACCTTTGCTTTACGCT...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CCA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACTCTAGTGTTTTTGGTTaGGACAGGCCACAGAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: CLLSISCVEHHAKCHKSYSSVFG*DRPQKA Trigger: AGCTTTCTGTGGCCTGTCCCAACCAAAAACACTAGA...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR GCA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACCTCATTCAGATAGGCTaGAATCTGGTTAGAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: CLLSISCVEHHAKCHKSYLIQIG*NLVRDF Trigger: GAAGTCTCTAACCAGATTGCAGCCTATCTGAATGAG...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS GCA 90 bp | CCCCGGCGTCCACCCGTAAGGGAGGGAGAGCCCGTCCTCGTATTCTaGGGGCAGCCATCGAGCCAGCGCCCTGTTGGCGGATCCCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: PRRPPVREGEPVLVF*GQPSSQRPVGGSQR Trigger: GCGCTGGGATCCGCCAACAGGGCGCTGGCTCGATGGCTGCCCGCAGAATACGAGGACGGGCTCTCCCTCCCTTACGGGTGGACGCCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS GCA 90 bp | GGGTTCTCCCACCAGAACCTGTCTCCATCTCGGATCCGCTGGAACTaGTGGCCCAGGAGACAGGTCAAGAGAGGTCCCACCCGACCCCTG | + |
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Preference number: 5 (lower is better) Translates to: GFSHQNLSPSRIRWN*WPRRQVKRGPTRPL Trigger: CAGGGGTCGGGTGGGACCTCTCTTGACCTGTCTCCTGGGCCAGCAGTTCCAGCGGATCCGAGATGGAGACAGGTTCTGGTGGGAGAACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 90 bp | TTCTCCCACCAGAACCTGTCTCCATCTCGGATCCGCTGGAACTGCTaGCCCAGGAGACAGGTCAAGAGAGGTCCCACCCGACCCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: FSHQNLSPSRIRWNC*PRRQVKRGPTRPLW Trigger: CCACAGGGGTCGGGTGGGACCTCTCTTGACCTGTCTCCTGGGCCAGCAGTTCCAGCGGATCCGAGATGGAGACAGGTTCTGGTGGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS GCA 90 bp | GGTTGGGACAGGCCACAGAAAGCTCTCCAGGAATTGTACCCAGGCTaGCCGTGGTCTCTGCTCCGCTGTATGTTGATGGAAGCCAGGTCG | + |
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Preference number: 5 (lower is better) Translates to: GWDRPQKALQELYPG*PWSLLRCMLMEARS Trigger: CGACCTGGCTTCCATCAACATACAGCGGAGCAGAGACCACGGGCAGCCTGGGTACAATTCCTGGAGAGCTTTCTGTGGCCTGTCCCAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 90 bp | GACAGGCCACAGAAAGCTCTCCAGGAATTGTACCCAGGCTGCCCGTaGTCTCTGCTCCGCTGTATGTTGATGGAAGCCAGGTCGAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: DRPQKALQELYPGCP*SLLRCMLMEARSKP Trigger: CGGCTTCGACCTGGCTTCCATCAACATACAGCGGAGCAGAGACCACGGGCAGCCTGGGTACAATTCCTGGAGAGCTTTCTGTGGCCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS TCA 90 bp | GGCGGGAGAAGGACATCTTCTGTAGAGACTCCCGTTGCTTCTCTGTaGAGACCCCGGGGTTCTCCCACCAGAACCTGTCTCCATCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: GGRRTSSVETPVASL*RPRGSPTRTCLHLG Trigger: TCCGAGATGGAGACAGGTTCTGGTGGGAGAACCCCGGGGTCTTCACAGAGAAGCAACGGGAGTCTCTACAGAAGATGTCCTTCTCCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS GCA 90 bp | TTGTGCTCCCGGATAAAGAGTGTGTGGGATGTGGCCAACAAGATCTaGTCTGAGGCTCGGGAGTCCCCTGCCAAGAAGCAGGGCACACCA | + |
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Preference number: 5 (lower is better) Translates to: LCSRIKSVWDVANKI*SEARESPAKKQGTP Trigger: TGGTGTGCCCTGCTTCTTGGCAGGGGACTCCCGAGCCTCAGAGCAGATCTTGTTGGCCACATCCCACACACTCTTTATCCGGGAGCACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS TCA 90 bp | GCTGGGTTTCATTTTGACGAAAGGCGGGAAGGGCCGCCCATTGTCTaGGACTTCTTCATTGACAGCCATGAGGCCCAAGGGGCTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AGFHFDERREGPPIV*DFFIDSHEAQGAAE Trigger: CTCAGCAGCCCCTTGGGCCTCATGGCTGTCAATGAAGAAGTCTCAGACAATGGGCGGCCCTTCCCGCCTTTCGTCAAAATGAAACCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 90 bp | TCACAGACCAGGCGGGAGAAGGACATCTTCTGTAGAGACTCCCGTTaGTTCTCTGTGAAGACCCCGGGGTTCTCCCACCAGAACCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQTRREKDIFCRDSR*FSVKTPGFSHQNLS Trigger: AGACAGGTTCTGGTGGGAGAACCCCGGGGTCTTCACAGAGAAGCAACGGGAGTCTCTACAGAAGATGTCCTTCTCCCGCCTGGTCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | GTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCAGTGTCTTGTTGACCCAGACCTaGACCTCTTCCACTGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VKGHSLSQCSFRERVGSVLLTQT*TSSTVS Trigger: CGACACAGTGGAAGAGGTCAAGGTCTGGGTCAACAA...GACACTGCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCAGTCCAGGAAGGCCTTGTaGACCCAGACCTTGACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KGQRPQPQPVLIQGEGRQSRKAL*TQTLTS Trigger: AGAGGTCAAGGTCTGGGTCAACAAGGCCTTCCTGGA...CTGCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 90 bp | CATGGATCTCTTCTGGTCCAGAACGTCCTCCTCATTCAGATAGGCTaGAATCTGGTTAGAGACTTCACGGGGCTGCGGGAGAGGGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGSLLVQNVLLIQIG*NLVRDFTGLREREA Trigger: GGCTTCCCTCTCCCGCAGCCCCGTGAAGTCTCTAACCAGATTGCAGCCTATCTGAATGAGGAGGACGTTCTGGACCAGAAGAGATCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS CCA 90 bp | AGGAAGGCCTTGTTGACCCAGACCTTGACCTCTTCCACTGTGTCGTaGATGATGTCAGTCTCGGCAGTTGGATCATCGCTGGCAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKALLTQTLTSSTVS*MMSVSAVGSSLADA Trigger: GGCATCTGCCAGCGATGATCCAACTGCCGAGACTGACATCATCCACGACACAGTGGAAGAGGTCAAGGTCTGGGTCAACAAGGCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
||
| CDS-3UTR CAA 90 bp | AAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCAGTCAATTCCACCATCCTaGACCAGCCTCCAGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGQRPQPQPVLIQGEGRQSIPPS*TSLQVL Trigger: CAACACCTGGAGGCTGGTCAAGGATGGTGGAATTGA...CTGCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCATCTCGGACCATGGACATGTTCGATGTAGGAAGCTGTGGGCAGCAGGTTAAAGCTCTCCAGGAATaGTACCCAGGCTGCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MASRTMDMFDVGSCGQQVKALQE*YPGCPW Trigger: CCACGGGCAGCCTGGGTACAATTCCTGGAGAGCTTT...AACCTGCTGCCCACAGCTTCCTACATCGAACATGTCCATGGTCCGAGATGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS TCA 90 bp | CCTGCCCACTCCGGATGGCTGTGCGTGTCCGGCCTTTGGCATGCTTaGGATAATCTGACAGATGACGGGTGCTATGTATCTTGGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAHSGWLCVSGLWHA*DNLTDDGCYVSWLS Trigger: TGACAACCAAGATACATAGCACCCGTCATCTGTCAGATTATCTCAAGCATGCCAAAGGCCGGACACGCACAGCCATCCGGAGTGGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
||
| CDS GCA 90 bp | TCCCAATGCGGGTTGAGTCTGCTTAGTTCTGTGGCCAACCGGTTGTaGTCCCGGATAAAGAGTGTGTGGGATGTGGCCAACAAGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQCGLSLLSSVANRL*SRIKSVWDVANKIC Trigger: GCAGATCTTGTTGGCCACATCCCACACACTCTTTATCCGGGAGCACAACCGGTTGGCCACAGAACTAAGCAGACTCAACCCGCATTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAATCCAGGAAGGCCTaGTTGACCCAGACCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GRKHKGQRPQPQPVLIQGESRKA*LTQTLT Trigger: GGTCAAGGTCTGGGTCAACAAGGCCTTCCTGGATTC...TCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | TCAAGGCCTGCCCCAGGAGGGGACAGCCTGATGTTTATTGAGCATTTCGTGTGTGTCGTGGTCCACGATTaGACCCCACTGCATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRPAPGGDSLMFIEHFVCVVVHD*TPLHEE Trigger: CTCTTCATGCAGTGGGGTCAAATCGTGGACCACGAC...ACACACGAAATGCTCAATAAACATCAGGCTGTCCCCTCCTGGGGCAGGCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS CCA 90 bp | TCCAGTGATGGTCCGGTAAGGGCTACTTATGTTGCAAGTCATTGTTaGAGCAGGGGGATCACAGCCCGCCTCCCAAGAGAGCAAAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSDGPVRATYVASHC*SRGITARLPREQSQ Trigger: TTGACTTTGCTCTCTTGGGAGGCGGGCTGTGATCCCCCTGCTCCAACAATGACTTGCAACATAAGTAGCCCTTACCGGACCATCACTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
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| CDS-3UTR CAA 90 bp | GGAGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAAAGAGGTTAGAGCATaGATCTGCTCTCGGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGNIKVKGHSLSQCSFREKEVRA*ICSRAR Trigger: CCTGGCCCGAGAGCAGATCAATGCTCTAACCTCTTT...CTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CAA 90 bp | AGGAAACATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGCTGCTCCGCTGTATGTaGATGGAAGCCAGGTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RKHKGQRPQPQPVLIQGELLRCM*MEARSK Trigger: CTTCGACCTGGCTTCCATCAACATACAGCGGAGCAG...CTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTATGTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS TCA 90 bp | CCGGATGGCTGTGCGTGTCCGGCCTTTGGCATGCTTGAGATAATCTaGCAGATGACGGGTGCTATGTATCTTGGTTGTCATGGCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PDGCACPAFGMLEII*QMTGAMYLGCHGHL Trigger: AAGATGGCCATGACAACCAAGATACATAGCACCCGTCATCTGTCAGATTATCTCAAGCATGCCAAAGGCCGGACACGCACAGCCATCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
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| CDS-3UTR CAA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAAACACCAGCTGTGGCATaGATGACCTCGCAGGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLASVSNLKGVGHWNCLKTPAVA*MTSQGL Trigger: CAGCCCCTGCGAGGTCATCAATGCCACAGCTGGTGT...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CAA 90 bp | ATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCGCAAAGGTGAAGACATaGGAAATTCGGGGGTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: IKVKGHSLSQCSFRERVGAKVKT*EIRGST Trigger: TGTAGACCCCCGAATTTCCAATGTCTTCACCTTTGC...GCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS CCA 90 bp | GGAAGCAGTTGTCTCCCTGGATACAGTGTTCGTCACACTGGGCTTTaGTGTAGGTATCACTCCCCATTTCAGTTTCAGGGGCAAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSSCLPGYSVRHTGL*CRYHSPFQFQGQSP Trigger: TGGACTTTGCCCCTGAAACTGAAATGGGGAGTGATACCTACACCAAAGCCCAGTGTGACGAACACTGTATCCAGGGAGACAACTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 90 bp | ACCTCGTTTTTCATGACAGCACTCAGCTCCTCTAGTGTTTTTGGTTaGGACAGGCCACAGAAAGCTCTCCAGGAATTGTACCCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TSFFMTALSSSSVFG*DRPQKALQELYPGC Trigger: GCAGCCTGGGTACAATTCCTGGAGAGCTTTCTGTGGCCTGTCCCAACCAAAAACACTAGAGGAGCTGAGTGCTGTCATGAAAAACGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCATCTCGGACCATGGACATGTTCGATGTAGGAAGCTGTGGGCAGCAGGTTTTATGTTGCAAGTCATaGTTGGAGCAGGGGGATCAC | + |
|
Preference number: 5 (lower is better) Translates to: MASRTMDMFDVGSCGQQVLCCKS*LEQGDH Trigger: GTGATCCCCCTGCTCCAACAATGACTTGCAACATAA...AACCTGCTGCCCACAGCTTCCTACATCGAACATGTCCATGGTCCGAGATGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGTCAAAGGCCACAGCCTCAGCCAGTGCTCATTCAGGGAGAGGGTAGGCGCTGGATTCTTCCTGTaGTTACAGTATCCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: IKVKGHSLSQCSFRERVGAGFFL*LQYPVM Trigger: CATCACTGGATACTGTAACAACAGGAAGAATCCAGC...GCCTACCCTCTCCCTGAATGAGCACTGGCTGAGGCTGTGGCCTTTGACCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCATCTCGGACCATGGACATGTTCGATGTAGGAAGCTGTGGGCAGCAGGTTAGACTCATTGTAGCCTaGGTATGGGGGAATCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: MASRTMDMFDVGSCGQQVRLIVA*VWGNPL Trigger: AAGTGGATTCCCCCATACCAAGGCTACAATGAGTCT...AACCTGCTGCCCACAGCTTCCTACATCGAACATGTCCATGGTCCGAGATGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CAA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCGCTCCTCTAGTGTTTTaGGTTGGGACAGGCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRQCLTSWKDILRSLSLVAPLVF*VGTGHR Trigger: TCTGTGGCCTGTCCCAACCAAAAACACTAGAGGAGC...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS TCA 90 bp | TGGCGGATCCCAGCGCTGGATTCTTCCTGTTGTTACAGTATCCAGTaGTGGTCCGGTAAGGGCTACTTATGTTGCAAGTCATTGTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WRIPALDSSCCYSIQ*WSGKGYLCCKSLLE Trigger: CTCCAACAATGACTTGCAACATAAGTAGCCCTTACCGGACCATCACTGGATACTGTAACAACAGGAAGAATCCAGCGCTGGGATCCGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTGCCACAAGTCGTACTCACAAGGCAGGCAGAGGTCTTTGACTCAGGATTGCTATGTATCTTGGTaGTCATGGCCATCTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKCHKSYSQGRQRSLTQDCYVSW*SWPSSA Trigger: GGCTGAAGATGGCCATGACAACCAAGATACATAGCA...ATCCTGAGTCAAAGACCTCTGCCTGCCTTGTGAGTACGACTTGTGGCACTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CAA 90 bp | GGTAGGCAGTGTCTGACAAGCTGGAAGGACATCTTAAGAAGCCTAAGTCTCGTCATGATGGGGAAGCAGTaGTCTCCCTGGATACAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRQCLTSWKDILRSLSLVMMGKQ*SPWIQC Trigger: ACACTGTATCCAGGGAGACAACTGCTTCCCCATCAT...GACGAGACTTAGGCTTCTTAAGATGTCCTTCCAGCTTGTCAGACACTGCCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CAA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAAGGGAAGGGCCGCCCATaGTCTGAGACTTCTTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: PLASVSNLKGVGHWNCLKGKGRP*SETSSL Trigger: CAATGAAGAAGTCTCAGACAATGGGCGGCCCTTCCC...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CAA 90 bp | GCTAAGTGCCACAAGTCGTACTCACAAGGCAGGCAGAGGTCTTTGACTCAGGATGGTCCAGCTTATCAATaGAAGAGCAGTCCACAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AKCHKSYSQGRQRSLTQDGPAYQ*KSSPQS Trigger: GCTTTGTGGACTGCTCTTCAATTGATAAGCTGGACC...ATCCTGAGTCAAAGACCTCTGCCTGCCTTGTGAGTACGACTTGTGGCACTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS GCA 90 bp | GTCCCTAAAGGTGGTAATCTGTATGAAGGCTCCCATGATTTTCCTTaGTTCCTGATAGAGCGTCTCTCTGTCCCAATGCGGGTTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPKGGNLYEGSHDFP*FLIERLSVPMRVES Trigger: AGACTCAACCCGCATTGGGACAGAGAGACGCTCTATCAGGAAGCAAGGAAAATCATGGGAGCCTTCATACAGATTACCACCTTTAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS-3UTR CAA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAAAGTCAAGTCCAGGCCTaGACCTGTGACATTGGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLASVSNLKGVGHWNCLKSQVQA*TCDIGE Trigger: CTCACCAATGTCACAGGTCAAGGCCTGGACTTGACT...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS TCA 90 bp | GGTTGGAACAGCTTGTTTCGAAGCTCGCCTGTCATCATTTTGTTCTaGTGCATCAACTTGGCATTCTTGGCCAACAGACCTCGAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GWNSLFRSSPVIILF*CINLAFLANRPRTR Trigger: TCTGGTTCGAGGTCTGTTGGCCAAGAATGCCAAGTTGATGCATCAGAACAAAATGATGACAGGCGAGCTTCGAAACAAGCTGTTCCAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGCCTCGGTGTCCAACTTAAAAGGAGTAGGTCACTGGAACTGTTTGAAACGGGTGCTATGTATCTaGGTTGTCATGGCCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLASVSNLKGVGHWNCLKRVLCI*VVMAIF Trigger: GAAGATGGCCATGACAACCAAGATACATAGCACCCG...TTTCAAACAGTTCCAGTGACCTACTCCTTTTAAGTTGGACACCGAGGCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 90 bp | TGTTTCGAAGCTCGCCTGTCATCATTTTGTTCTGATGCATCAACTTaGCATTCTTGGCCAACAGACCTCGAACCAGAGGATCAATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CFEARLSSFCSDAST*HSWPTDLEPEDQFH Trigger: GTGGAATTGATCCTCTGGTTCGAGGTCTGTTGGCCAAGAATGCCAAGTTGATGCATCAGAACAAAATGATGACAGGCGAGCTTCGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACACCAGCCTCCAGGTGTaGAAAAAGACAGTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLLSISCVEHHAKCHKSYTSLQV*KKTVCR Trigger: CCTGCACACTGTCTTTTTCAACACCTGGAGGCTGGT...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS-3UTR CAA 90 bp | TGTTTATTGAGCATTTCGTGTGTTGAACACCATGCTAAGTGCCACAAGTCGTACAGGTCCATCAGCTTCTaGGCCAGCACCTCGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLSISCVEHHAKCHKSYRSISF*ASTSFF Trigger: GAAAAACGAGGTGCTGGCCAAGAAGCTGATGGACCT...GTACGACTTGTGGCACTTAGCATGGTGTTCAACACACGAAATGCTCAATAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 72 bp | CCACCCGTAAGGGAGGGAGAGCCCGTCCTCGTATTCTaGGGGCAGCCATCGAGCCAGCGCCCTGTTGGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPVREGEPVLVF*GQPSSQRPVGG Trigger: TCCGCCAACAGGGCGCTGGCTCGATGGCTGCCCGCAGAATACGAGGACGGGCTCTCCCTCCCTTACGGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 72 bp | CACCAGAACCTGTCTCCATCTCGGATCCGCTGGAACTaGTGGCCCAGGAGACAGGTCAAGAGAGGTCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HQNLSPSRIRWN*WPRRQVKRGPT Trigger: GGTGGGACCTCTCTTGACCTGTCTCCTGGGCCAGCAGTTCCAGCGGATCCGAGATGGAGACAGGTTCTGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 72 bp | AGGCGGGAGAAGGACATCTTCTGTAGAGACTCCCGTTaGTTCTCTGTGAAGACCCCGGGGTTCTCCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RREKDIFCRDSR*FSVKTPGFSHQ Trigger: CTGGTGGGAGAACCCCGGGGTCTTCACAGAGAAGCAACGGGAGTCTCTACAGAAGATGTCCTTCTCCCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 72 bp | CGGATAAAGAGTGTGTGGGATGTGGCCAACAAGATCTaGTCTGAGGCTCGGGAGTCCCCTGCCAAGAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RIKSVWDVANKI*SEARESPAKKQ Trigger: CTGCTTCTTGGCAGGGGACTCCCGAGCCTCAGAGCAGATCTTGTTGGCCACATCCCACACACTCTTTATCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS CCA 72 bp | CAGAAAGCTCTCCAGGAATTGTACCCAGGCTGCCCGTaGTCTCTGCTCCGCTGTATGTTGATGGAAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QKALQELYPGCP*SLLRCMLMEAR Trigger: CCTGGCTTCCATCAACATACAGCGGAGCAGAGACCACGGGCAGCCTGGGTACAATTCCTGGAGAGCTTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS CAA 72 bp | ATCTTCAGCCTGTCCCGGGAATCCAGGAAGGCCTTGTaGACCCAGACCTTGACCTCTTCCACTGTGTCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: IFSLSRESRKAL*TQTLTSSTVSW Trigger: CCACGACACAGTGGAAGAGGTCAAGGTCTGGGTCAACAAGGCCTTCCTGGATTCCCGGGACAGGCTGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
||
| CDS CAA 90 bp | GTCATGGCCATCTTCAGCCTGTCCCGGGAATCCAGGAAGGCCTTGTaGACCCAGACCTTGACCTCTTCCACTGTGTCGTGGATGATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VMAIFSLSRESRKAL*TQTLTSSTVSWMMS Trigger: TGACATCATCCACGACACAGTGGAAGAGGTCAAGGTCTGGGTCAACAAGGCCTTCCTGGATTCCCGGGACAGGCTGAAGATGGCCATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
||
| CDS CAA 90 bp | GCATTAGCCTGGAACGGGTTCAGTGGGACCTTGTCGATGCCAGTGTaGTCACAGACCAGGCGGGAGAAGGACATCTTCTGTAGAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALAWNGFSGTLSMPV*SQTRREKDIFCRDS Trigger: GGAGTCTCTACAGAAGATGTCCTTCTCCCGCCTGGTCTGTGACAACACTGGCATCGACAAGGTCCCACTGAACCCGTTCCAGGCTAATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS TCA 72 bp | AGGACATCTTCTGTAGAGACTCCCGTTGCTTCTCTGTaGAGACCCCGGGGTTCTCCCACCAGAACCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RTSSVETPVASL*RPRGSPTRTCL Trigger: GAGACAGGTTCTGGTGGGAGAACCCCGGGGTCTTCACAGAGAAGCAACGGGAGTCTCTACAGAAGATGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 72 bp | CTTCTGGTCCAGAACGTCCTCCTCATTCAGATAGGCTaGAATCTGGTTAGAGACTTCACGGGGCTGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLVQNVLLIQIG*NLVRDFTGLRE Trigger: CTCCCGCAGCCCCGTGAAGTCTCTAACCAGATTGCAGCCTATCTGAATGAGGAGGACGTTCTGGACCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
||
| CDS GCA 72 bp | GGGTTGAGTCTGCTTAGTTCTGTGGCCAACCGGTTGTaGTCCCGGATAAAGAGTGTGTGGGATGTGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GLSLLSSVANRL*SRIKSVWDVAN Trigger: GTTGGCCACATCCCACACACTCTTTATCCGGGAGCACAACCGGTTGGCCACAGAACTAAGCAGACTCAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS GCA 72 bp | AGGCCACAGAAAGCTCTCCAGGAATTGTACCCAGGCTaGCCGTGGTCTCTGCTCCGCTGTATGTTGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: RPQKALQELYPG*PWSLLRCMLME Trigger: TTCCATCAACATACAGCGGAGCAGAGACCACGGGCAGCCTGGGTACAATTCCTGGAGAGCTTTCTGTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CAA 72 bp | TGGTCCGGTAAGGGCTACTTATGTTGCAAGTCATTGTaGGAGCAGGGGGATCACAGCCCGCCTCCCAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: WSGKGYLCCKSL*EQGDHSPPPKR Trigger: TCTCTTGGGAGGCGGGCTGTGATCCCCCTGCTCCAACAATGACTTGCAACATAAGTAGCCCTTACCGGACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
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| CDS CAA 90 bp | CTGTCCCAATGCGGGTTGAGTCTGCTTAGTTCTGTGGCCAACCGGTaGTGCTCCCGGATAAAGAGTGTGTGGGATGTGGCCAACAAGATC | + |
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Preference number: 6 (lower is better) Translates to: LSQCGLSLLSSVANR*CSRIKSVWDVANKI Trigger: GATCTTGTTGGCCACATCCCACACACTCTTTATCCGGGAGCACAACCGGTTGGCCACAGAACTAAGCAGACTCAACCCGCATTGGGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS TCA 72 bp | CTTCCTGATAGAGCGTCTCTCTGTCCCAATGCGGGTTaGGTCTGCTTAGTTCTGTGGCCAACCGGTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LPDRASLCPNAG*VCLVLWPTGCA Trigger: AGCACAACCGGTTGGCCACAGAACTAAGCAGACTCAACCCGCATTGGGACAGAGAGACGCTCTATCAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 72 bp | CTGACAGATGACGGGTGCTATGTATCTTGGTTGTCATaGCCATCTTCAGCCTGTCCCGGGAATCCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LTDDGCYVSWLS*PSSACPGNPGR Trigger: CCTTCCTGGATTCCCGGGACAGGCTGAAGATGGCCATGACAACCAAGATACATAGCACCCGTCATCTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
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| CDS CAA 72 bp | GGTTTCATTTTGACGAAAGGCGGGAAGGGCCGCCCATaGTCTGAGACTTCTTCATTGACAGCCATGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GFILTKGGKGRP*SETSSLTAMRP Trigger: GGGCCTCATGGCTGTCAATGAAGAAGTCTCAGACAATGGGCGGCCCTTCCCGCCTTTCGTCAAAATGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS TCA 72 bp | TCCGGATGGCTGTGCGTGTCCGGCCTTTGGCATGCTTaGGATAATCTGACAGATGACGGGTGCTATGTATCT | + |
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Preference number: 6 (lower is better) Translates to: SGWLCVSGLWHA*DNLTDDGCYVS Trigger: AGATACATAGCACCCGTCATCTGTCAGATTATCTCAAGCATGCCAAAGGCCGGACACGCACAGCCATCCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
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| CDS TCA 72 bp | GGTCCATCAGCTTCTTGGCCAGCACCTCGTTTTTCATaGCAGCACTCAGCTCCTCTAGTGTTTTTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GPSASWPAPRFS*QHSAPLVFLVG Trigger: CCCAACCAAAAACACTAGAGGAGCTGAGTGCTGTCATGAAAAACGAGGTGCTGGCCAAGAAGCTGATGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 72 bp | TGTCTCCCTGGATACAGTGTTCGTCACACTGGGCTTTaGTGTAGGTATCACTCCCCATTTCAGTTTCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: CLPGYSVRHTGL*CRYHSPFQFQG Trigger: CCCCTGAAACTGAAATGGGGAGTGATACCTACACCAAAGCCCAGTGTGACGAACACTGTATCCAGGGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS GCA 72 bp | GGTGGTAATCTGTATGAAGGCTCCCATGATTTTCCTTaGTTCCTGATAGAGCGTCTCTCTGTCCCAATGCGG | + |
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Preference number: 6 (lower is better) Translates to: GGNLYEGSHDFP*FLIERLSVPMR Trigger: CCGCATTGGGACAGAGAGACGCTCTATCAGGAAGCAAGGAAAATCATGGGAGCCTTCATACAGATTACCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CAA 72 bp | GATAATCTGACAGATGACGGGTGCTATGTATCTTGGTaGTCATGGCCATCTTCAGCCTGTCCCGGGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: DNLTDDGCYVSW*SWPSSACPGNP Trigger: TGGATTCCCGGGACAGGCTGAAGATGGCCATGACAACCAAGATACATAGCACCCGTCATCTGTCAGATTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
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| CDS CAA 72 bp | GGATCAATTCCACCATCCTTGACCAGCCTCCAGGTGTaGAAAAAGACAGTGTGCAGGGGTAGCTCAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: GSIPPSLTSLQV*KKTVCRGSSDS Trigger: AGAATCTGAGCTACCCCTGCACACTGTCTTTTTCAACACCTGGAGGCTGGTCAAGGATGGTGGAATTGATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CAA 90 bp | TATGTTGATGGAAGCCAGGTCGAAGCCGTGGATGGTGTGATTCGGTaGGAACAGCTTGTTTCGAAGCTCGCCTGTCATCATTTTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: YVDGSQVEAVDGVIR*EQLVSKLACHHFVL Trigger: CAGAACAAAATGATGACAGGCGAGCTTCGAAACAAGCTGTTCCAACCGAATCACACCATCCACGGCTTCGACCTGGCTTCCATCAACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS TCA 72 bp | TGTGCGTGTCCGGCCTTTGGCATGCTTGAGATAATCTaGCAGATGACGGGTGCTATGTATCTTGGTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: CACPAFGMLEII*QMTGAMYLGCH Trigger: ATGACAACCAAGATACATAGCACCCGTCATCTGTCAGATTATCTCAAGCATGCCAAAGGCCGGACACGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103177.10 ENSMUST00000136446.3 |
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| CDS TCA 72 bp | CCAGCGCTGGATTCTTCCTGTTGTTACAGTATCCAGTaGTGGTCCGGTAAGGGCTACTTATGTTGCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PALDSSCCYSIQ*WSGKGYLCCKS Trigger: TGACTTGCAACATAAGTAGCCCTTACCGGACCATCACTGGATACTGTAACAACAGGAAGAATCCAGCGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 72 bp | GCTCGCCTGTCATCATTTTGTTCTGATGCATCAACTTaGCATTCTTGGCCAACAGACCTCGAACCAGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: ARLSSFCSDAST*HSWPTDLEPED Trigger: ATCCTCTGGTTCGAGGTCTGTTGGCCAAGAATGCCAAGTTGATGCATCAGAACAAAATGATGACAGGCGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 72 bp | TTCATGACAGCACTCAGCTCCTCTAGTGTTTTTGGTTaGGACAGGCCACAGAAAGCTCTCCAGGAATTGTAC | + |
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Preference number: 6 (lower is better) Translates to: FMTALSSSSVFG*DRPQKALQELY Trigger: GTACAATTCCTGGAGAGCTTTCTGTGGCCTGTCCCAACCAAAAACACTAGAGGAGCTGAGTGCTGTCATGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CAA 72 bp | ATTGGAAATTCGGGGGTCTACAGACTCATTGTAGCCTaGGTATGGGGGAATCCACTTCTGCATCTCATCACC | + |
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Preference number: 6 (lower is better) Translates to: IGNSGVYRLIVA*VWGNPLLHLIT Trigger: GGTGATGAGATGCAGAAGTGGATTCCCCCATACCAAGGCTACAATGAGTCTGTAGACCCCCGAATTTCCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS TCA 72 bp | ACAAATCCAGCTCTGAAGAAAGGCATGCACTTCCCCTaGGTCTTTAATTTAGGGTCACCAGGTGGGAACATG | + |
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Preference number: 6 (lower is better) Translates to: TNPALKKGMHFP*VFNLGSPGGNM Trigger: CATGTTCCCACCTGGTGACCCTAAATTAAAGACTCAGGGGAAGTGCATGCCTTTCTTCAGAGCTGGATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS TCA 72 bp | ATTTATAGGGTGGTGTGGGGCAGACAAATCCAGCTCTaGAGAAAGGCATGCACTTCCCCTGAGTCTTTAATT | + |
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Preference number: 6 (lower is better) Translates to: IYRVVWGRQIQL*RKACTSPESLI Trigger: AATTAAAGACTCAGGGGAAGTGCATGCCTTTCTTCAGAGCTGGATTTGTCTGCCCCACACCACCCTATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS TCA 72 bp | AGCTTGTTTCGAAGCTCGCCTGTCATCATTTTGTTCTaGTGCATCAACTTGGCATTCTTGGCCAACAGACCT | + |
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Preference number: 6 (lower is better) Translates to: SLFRSSPVIILF*CINLAFLANRP Trigger: AGGTCTGTTGGCCAAGAATGCCAAGTTGATGCATCAGAACAAAATGATGACAGGCGAGCTTCGAAACAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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| CDS CCA 72 bp | TCATCATTTTGTTCTGATGCATCAACTTGGCATTCTTaGCCAACAGACCTCGAACCAGAGGATCAATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSFCSDASTWHS*PTDLEPEDQFH Trigger: GTGGAATTGATCCTCTGGTTCGAGGTCTGTTGGCCAAGAATGCCAAGTTGATGCATCAGAACAAAATGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103177.10 |
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