Pregenerated sensors for LPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015568Ensembl transcript IDs: ENSMUST00000015712.15, ENSMUST00000168401.2
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTGACTTGTACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATaGGCCATGTCTTCAACTGCTTTTGCCAAGTCACACGTTCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: VDLYFVVVGPRVRTS*AMSSTAFAKSHVPG Trigger: ACCAGGAACGTGTGACTTGGCAAAAGCAGTTGAAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTaGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: YSGIDTKGQQSLEQL*KLISALVLVPLFCV Trigger: TACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR GCA 90 bp | TGCCTCTGCCTGCCAAGTGCTGGGATTAAAGGTGAGTGCCACCATTaGCCAGCTTACAAGCTCCAGAGAACAATGTTAAAATATCTGACA | + |
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Preference number: 1 (lower is better) Translates to: CLCLPSAGIKGECHH*PAYKLQRTMLKYLT Trigger: TGTCAGATATTTTAACATTGTTCTCTGGAGCTTGTAAGCTGGGCAATGGTGGCACTCACCTTTAATCCCAGCACTTGGCAGGCAGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR GCA 90 bp | TTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATATaGTTAGTCTCCAGATGCGGTGTCCCATTTTGTTTTCTTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: FLLWSWSRCSVYVHI*LVSRCGVPFCFLLS Trigger: AGACAGAAGAAAACAAAATGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR CCA 90 bp | CTCAGTCTAGGTTTTGTATCTCTGTTGACTTGTACTTTGTTGTGGTaGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTCAACTGCTT | + |
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Preference number: 1 (lower is better) Translates to: LSLGFVSLLTCTLLW*DQGSGLHEPCLQLL Trigger: AAGCAGTTGAAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGTCAACAGAGATACAAAACCTAGACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 90 bp | AATTACAGTTCTCAAGCTCCCAGGACACAGGAAGCTAAGGCAGGATaGTTGAGAGTTCAAGGCCAGCCTGAAATACATAGTTTAGTTCGA | + |
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Preference number: 1 (lower is better) Translates to: NYSSQAPRTQEAKAG*LRVQGQPEIHSLVR Trigger: TCGAACTAAACTATGTATTTCAGGCTGGCCTTGAACTCTCAACCATCCTGCCTTAGCTTCCTGTGTCCTGGGAGCTTGAGAACTGTAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR TCA 90 bp | TGGTCACATATATCTATGAGGGAGAGACTACACATATTCGGGTATTaGCACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGAT | + |
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Preference number: 1 (lower is better) Translates to: WSHISMRERLHIFGY*HQGSAVIGATVETD Trigger: ATCAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATATGTGTAGTCTCTCCCTCATAGATATATGTGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR GCA 90 bp | AATGATTCCTTCTTAAGGGATACAAGACAGCATGTTTCTCCTGCCTaGTGTCTTCTAATGCTGGAAGACCTGCTATGGGCCATTAGATTC | + |
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Preference number: 1 (lower is better) Translates to: NDSFLRDTRQHVSPA*CLLMLEDLLWAIRF Trigger: GAATCTAATGGCCCATAGCAGGTCTTCCAGCATTAGAAGACAGCAGGCAGGAGAAACATGCTGTCTTGTATCCCTTAAGAAGGAATCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR TCA 90 bp | ATTCCAGTATATCCCTTGACTCTTTCCTTTCTGAATCACATTGAATaGCGACTACACTTGTGGGGCTTTGCATGTGGGTTGGTGTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: IPVYPLTLSFLNHIE*RLHLWGFACGLVFR Trigger: TCTGAACACCAACCCACATGCAAAGCCCCACAAGTGTAGTCGTCATTCAATGTGATTCAGAAAGGAAAGAGTCAAGGGATATACTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR TCA 90 bp | AAGCCTATTTCATTGTACTGTTTCATCAGAGTTAAGTTGGCTCAGTaGGACAGACAATCATGGATGGAGACGGACACAAAGTTAGCACCA | + |
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Preference number: 1 (lower is better) Translates to: KPISLYCFIRVKLAQ*DRQSWMETDTKLAP Trigger: TGGTGCTAACTTTGTGTCCGTCTCCATCCATGATTGTCTGTCTCACTGAGCCAACTTAACTCTGATGAAACAGTACAATGAAATAGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 90 bp | TCTTTCAAAAGCCTATTTCATTGTACTGTTTCATCAGAGTTAAGTTaGCTCAGTGAGACAGACAATCATGGATGGAGACGGACACAAAGT | + |
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Preference number: 1 (lower is better) Translates to: SFKSLFHCTVSSELS*LSETDNHGWRRTQS Trigger: ACTTTGTGTCCGTCTCCATCCATGATTGTCTGTCTCACTGAGCCAACTTAACTCTGATGAAACAGTACAATGAAATAGGCTTTTGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 90 bp | CCTGAGTTTTTAGAACAATATGCTATAACTTATTCAGCATGCTCTTaGTCACATATATCTATGAGGGAGAGACTACACATATTCGGGTAT | + |
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Preference number: 1 (lower is better) Translates to: PEFLEQYAITYSACS*SHISMRERLHIFGY Trigger: ATACCCGAATATGTGTAGTCTCTCCCTCATAGATATATGTGACCAAGAGCATGCTGAATAAGTTATAGCATATTGTTCTAAAAACTCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGTGTACTTTGTTGTGGTaGGACCAAGGGTCAGGACTT | + |
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Preference number: 2 (lower is better) Translates to: VNQAGLELRNPPASACQVCTLLW*DQGSGL Trigger: AAGTCCTGACCCTTGGTCCCACCACAACAAAGTACA...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CAA 90 bp | TTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTaGTTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LEQLWKLISALVLVP*FCVCAYMLSLQMRC Trigger: ACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGGGAGTCTTATATTGTTaGGAGCAAATGATTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VNQAGLELRNPPASACQVGVLYC*EQMIPS Trigger: AGAAGGAATCATTTGCTCCCAACAATATAAGACTCC...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR TCA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCCTAAGGCAGGATGGTTaGGAGTTCAAGGCCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HHKSILQITTTDFPVFTSLRQDG*EFKASL Trigger: CAGGCTGGCCTTGAACTCTCAACCATCCTGCCTTAG...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR TCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAAAACCAGGCTGGCCTTaGACTCAGAAATCCTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: AWMCIYCNELAIMGMPVTKPGWP*TQKSSC Trigger: GCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR GCA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCACTCAGAAATCCTCCTaGCTCTGCCTGCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: HHKSILQITTTDFPVFTSTQKSS*LCLPSA Trigger: AGCACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGT...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR GCA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGGTGTATGTGCATATATaGTTAGTCTCCAGATGCGGT | + |
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Preference number: 2 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLVYVHI*LVSRCG Trigger: ACCGCATCTGGAGACTAAGCATATATGCACATACAC...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACAGCCATGTCTTCAACTaGTTTTGCCAAGTCACACGT | + |
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Preference number: 2 (lower is better) Translates to: TFVLYYIGTTSFLLARANSHVFN*FCQVTR Trigger: ACGTGTGACTTGGCAAAAGCAGTTGAAGACATGGCT...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CAA 90 bp | GAATTACTCAGTCTAGGTTTTGTATCTCTGTTGACTTGTACTTTGTaGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: ELLSLGFVSLLTCTL*WWDQGSGLHEPCLQ Trigger: TTGAAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGTCAACAGAGATACAAAACCTAGACTGAGTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR GCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAGTCTTCAACTGCTTTTaGCAAGTCACACGTTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AWMCIYCNELAIMGMPVTVFNCF*QVTRSW Trigger: CCAGGAACGTGTGACTTGGCAAAAGCAGTTGAAGAC...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAACTTGTACTTTGTTGTaGTGGGACCAAGGGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: AWMCIYCNELAIMGMPVTTCTLL*WDQGSG Trigger: TCCTGACCCTTGGTCCCACCACAACAAAGTACAAGT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR GCA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCCATGTTTCTCCTGCCTaGTGTCTTCTAATGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: HHKSILQITTTDFPVFTSHVSPA*CLLMLE Trigger: TTCCAGCATTAGAAGACAGCAGGCAGGAGAAACATG...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR GCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAACAGCATGTTTCTCCTaGCTGCTGTCTTCTAATGCT | + |
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Preference number: 2 (lower is better) Translates to: AWMCIYCNELAIMGMPVTTACFS*LLSSNA Trigger: AGCATTAGAAGACAGCAGGCAGGAGAAACATGCTGT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR TCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACACTAATTTTAGACCATaGCCAAATGGGTCACATGAT | + |
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Preference number: 2 (lower is better) Translates to: TFVLYYIGTTSFLLARANTNFRP*PNGSHD Trigger: ATCATGTGACCCATTTGGTCATGGTCTAAAATTAGT...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CCA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTATTAGATTCCTCACCCTaGGTTAGCCACCGTTTAATA | + |
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Preference number: 2 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLLDSSP*VSHRLI Trigger: TATTAAACGGTGGCTAACCCAGGGTGAGGAATCTAA...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR TCA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTACCACCGTTTAATATTTaGGACTGTCTTCTGTTTAAC | + |
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Preference number: 2 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLPPFNI*DCLLFN Trigger: GTTAAACAGAAGACAGTCTCAAATATTAAACGGTGG...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR GCA 72 bp | TGCCTCTGCCTGCCAAGTGCTGGGATTAAAGGTGAGTaGCACCATTGCCCAGCTTACAAGCTCCAGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: CLCLPSAGIKGE*HHCPAYKLQRT Trigger: TGTTCTCTGGAGCTTGTAAGCTGGGCAATGGTGGCACTCACCTTTAATCCCAGCACTTGGCAGGCAGAGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CAA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGTTGACTTGTACTTTGTaGTGGTGGGACCAAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: VNQAGLELRNPPASACQVLTCTL*WWDQGS Trigger: TGACCCTTGGTCCCACCACAACAAAGTACAAGTCAA...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 72 bp | ATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTaGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTG | + |
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Preference number: 3 (lower is better) Translates to: IDTKGQQSLEQL*KLISALVLVPL Trigger: CAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGTGTATCTCTGTTGACTaGTACTTTGTTGTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: VNQAGLELRNPPASACQVCISVD*YFVVVG Trigger: TCCCACCACAACAAAGTACAAGTCAACAGAGATACA...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 72 bp | TCTCAAGCTCCCAGGACACAGGAAGCTAAGGCAGGATaGTTGAGAGTTCAAGGCCAGCCTGAAATACATAGT | + |
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Preference number: 3 (lower is better) Translates to: SQAPRTQEAKAG*LRVQGQPEIHS Trigger: ACTATGTATTTCAGGCTGGCCTTGAACTCTCAACCATCCTGCCTTAGCTTCCTGTGTCCTGGGAGCTTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CAA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGCTGGTCCTGGTCCCGTaGTTCTGTGTATGTGCATAT | + |
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Preference number: 3 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLLVLVP*FCVCAY Trigger: ATATGCACATACACAGAACAACGGGACCAGGACCAG...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR TCA 72 bp | TACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATaGGCCATGTCTTCAACTGCTTTTGCCAAGTCACAC | + |
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Preference number: 3 (lower is better) Translates to: YFVVVGPRVRTS*AMSSTAFAKSH Trigger: GTGTGACTTGGCAAAAGCAGTTGAAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR TCA 72 bp | ATATCTATGAGGGAGAGACTACACATATTCGGGTATTaGCACCAAGGGTCAGCAGTCATTGGAGCAACTGTG | + |
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Preference number: 3 (lower is better) Translates to: ISMRERLHIFGY*HQGSAVIGATV Trigger: CACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATATGTGTAGTCTCTCCCTCATAGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR GCA 72 bp | TGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATATaGTTAGTCTCCAGATGCGGTGTCCCATTTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: WSWSRCSVYVHI*LVSRCGVPFCF Trigger: AAAACAAAATGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAACAACGGGACCAGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR CCA 72 bp | GGTTTTGTATCTCTGTTGACTTGTACTTTGTTGTGGTaGGACCAAGGGTCAGGACTTCATGAGCCATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: GFVSLLTCTLLW*DQGSGLHEPCL Trigger: AAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGTCAACAGAGATACAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 72 bp | CTAGGTTTTGTATCTCTGTTGACTTGTACTTTGTTGTaGTGGGACCAAGGGTCAGGACTTCATGAGCCATGT | + |
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Preference number: 3 (lower is better) Translates to: LGFVSLLTCTLL*WDQGSGLHEPC Trigger: ACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGTCAACAGAGATACAAAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CAA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCCTGTTGACTTGTACTTaGTTGTGGTGGGACCAAGGG | + |
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Preference number: 3 (lower is better) Translates to: HHKSILQITTTDFPVFTSLLTCT*LWWDQG Trigger: CCCTTGGTCCCACCACAACAAAGTACAAGTCAACAG...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CAA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGATGCGGTGTCCCATTTaGTTTTCTTCTGTCTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLMRCPI*FSSVFK Trigger: TTTGAAGACAGAAGAAAACAAAATGGGACACCGCAT...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR TCA 72 bp | TATCCCTTGACTCTTTCCTTTCTGAATCACATTGAATaGCGACTACACTTGTGGGGCTTTGCATGTGGGTTG | + |
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Preference number: 3 (lower is better) Translates to: YPLTLSFLNHIE*RLHLWGFACGL Trigger: CAACCCACATGCAAAGCCCCACAAGTGTAGTCGTCATTCAATGTGATTCAGAAAGGAAAGAGTCAAGGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR TCA 72 bp | TCATTGTACTGTTTCATCAGAGTTAAGTTGGCTCAGTaGGACAGACAATCATGGATGGAGACGGACACAAAG | + |
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Preference number: 3 (lower is better) Translates to: SLYCFIRVKLAQ*DRQSWMETDTK Trigger: CTTTGTGTCCGTCTCCATCCATGATTGTCTGTCTCACTGAGCCAACTTAACTCTGATGAAACAGTACAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR CCA 72 bp | AGCCTATTTCATTGTACTGTTTCATCAGAGTTAAGTTaGCTCAGTGAGACAGACAATCATGGATGGAGACGG | + |
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Preference number: 3 (lower is better) Translates to: SLFHCTVSSELS*LSETDNHGWRR Trigger: CCGTCTCCATCCATGATTGTCTGTCTCACTGAGCCAACTTAACTCTGATGAAACAGTACAATGAAATAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CAA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTAGGCTTTGCATGTGGGTaGGTGTTCAGATACCCACAA | + |
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Preference number: 3 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLGFACG*VFRYPQ Trigger: TTGTGGGTATCTGAACACCAACCCACATGCAAAGCC...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGTTTTTAGAACAATATGCTATAACTTATTCAGCATGCTCTTGGTCACATAAGGGTCAGCAGTCATaGGAGCAACTGTGGAAACTG | + |
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Preference number: 3 (lower is better) Translates to: PEFLEQYAITYSACSWSHKGQQS*EQLWKL Trigger: CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTT...ATGTGACCAAGAGCATGCTGAATAAGTTATAGCATATTGTTCTAAAAACTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| 3UTR-3UTR CAA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAGGTTTTGTATCTCTGTaGACTTGTACTTTGTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: AWMCIYCNELAIMGMPVTGFVSL*TCTLLW Trigger: CCACAACAAAGTACAAGTCAACAGAGATACAAAACC...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| 3UTR TCA 72 bp | AAGTGTGACAGAGGCATGGCGGAGATGAGTCTCAAATaGAATACAAAGTATTGGATATTGGGCATTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: KCDRGMAEMSLK*NTKYWILGISN Trigger: ATTTGAAATGCCCAATATCCAATACTTTGTATTTCATTTGAGACTCATCTCCGCCATGCCTCTGTCACACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| 3UTR GCA 72 bp | CTTTCTATAGCTATTACAGTTGAGGGCTCTTCTCTTTaGACAGCAGTTTACAAGCATCCATATGCACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSIAITVEGSSL*TAVYKHPYAHF Trigger: AAAATGTGCATATGGATGCTTGTAAACTGCTGTGCAAAGAGAAGAGCCCTCAACTGTAATAGCTATAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| 3UTR CCA 72 bp | TTAGAACAATATGCTATAACTTATTCAGCATGCTCTTaGTCACATATATCTATGAGGGAGAGACTACACATA | + |
|
Preference number: 3 (lower is better) Translates to: LEQYAITYSACS*SHISMRERLHI Trigger: TATGTGTAGTCTCTCCCTCATAGATATATGTGACCAAGAGCATGCTGAATAAGTTATAGCATATTGTTCTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTTCTTCCCGCGTCTGCTaGGGCCACCCCTCCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GATVETDFCSGPGPVVLCSSRVC*GHPSSE Trigger: TTCCGAGGAGGGGTGGCCGCAGCAGACGCGGGAAGA...ACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGCGCTCTCGGCCACTGTaGCGTACAGAGAAATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VNQAGLELRNPPASACQVRSRPL*RTEKSR Trigger: TCGAGATTTCTCTGTACGGCACAGTGGCCGAGAGCG...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR TCA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGTCAGCAGGGAGTCAATaGAGAGATGAATGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VNQAGLELRNPPASACQVSAGSQ*RDEWSA Trigger: AGCGCTCCATTCATCTCTTCATTGACTCCCTGCTGA...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR TCA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGAATCCAGGAATGAGATaGCAAGTGTCCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNQAGLELRNPPASACQVNPGMR*QVSSAV Trigger: CACAGCTGAGGACACTTGTCATCTCATTCCTGGATT...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | GGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTAGGCTTCCTTGGAGTTaGACCTGTATGCCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GATVETDFCSGPGPVVLCRLPWS*TCMPCW Trigger: CCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCT...ACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | GTCATTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTGGGCGGCCACAAGTTTaGGCACCCAACTCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: VIGATVETDFCSGPGPVVGRPQV*APNSHT Trigger: TGTATGAGAGTTGGGTGCCCAAACTTGTGGCCGCCC...AACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGGAGCACTTCACCAGCTaGTCCACGTCTCCGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLEHFTS*STSPSP Trigger: AGGACTCGGAGACGTGGACCAGCTGGTGAAGTGCTC...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGTACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTGCGACTGGGGGCTTCTaGATACTCAAAGTTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TCTLLWWDQGSGLHEPCLATGGF*ILKVRP Trigger: GGGCCTAACTTTGAGTATGCAGAAGCCCCCAGTCGC...AAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGGCGACTGGGGGCTTCTaGATACTCAAAGTTAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLATGGF*ILKVRP Trigger: GGGCCTAACTTTGAGTATGCAGAAGCCCCCAGTCGC...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTTGCATCCTGGCTaGAAAGTGCCTCCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GATVETDFCSGPGPVVLCMLHPG*KVPPLG Trigger: TCCCAATGGAGGCACTTTCCAGCCAGGATGCAACAT...ACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTAATACTTCGACCAGGTaGCCCCCTGGTAAATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEQLWKLISALVLVPLFCNTSTR*PPGKCV Trigger: CACACATTTACCAGGGGGTCACCTGGTCGAAGTATT...ACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGTACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTGAGTCAATGAAGAGATaGATGGAGCGCTCGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCTLLWWDQGSGLHEPCLESMKR*MERSCE Trigger: CTCGCACGAGCGCTCCATTCATCTCTTCATTGACTC...AAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | GTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATCCGAGTCCTCTCTCTaGAATCACACGGATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VETDFCSGPGPVVLCMCISESSL*NHTDGF Trigger: GAAGCCATCCGTGTGATTGCAGAGAGAGGACTCGGA...TATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATATGCTTAGTCCGCTCTCGGCCACTGTaGCGTACAGAGAAATCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLWSWSRCSVYVHICLVRSRPL*RTEKSR Trigger: TCGAGATTTCTCTGTACGGCACAGTGGCCGAGAGCG...GACTAAGCATATATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGTTGTTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGTCCCACAGGAGAAAGGCGACTaGGGGCTTCTGCATACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRCSVYVHICLVSRCGVPQEKGD*GLLHTQ Trigger: TTGAGTATGCAGAAGCCCCCAGTCGCCTTTCTCCTG...TGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAACAACGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATATGCTTAGTCGAGTCAATGAAGAGATaGATGGAGCGCTCGTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLLWSWSRCSVYVHICLVESMKR*MERSCE Trigger: CTCGCACGAGCGCTCCATTCATCTCTTCATTGACTC...GACTAAGCATATATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | TGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCTCAGCAGGGAGTCAATaGAGAGATGAATGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSWSRCSVYVHICLVSRCSAGSQ*RDEWSA Trigger: AGCGCTCCATTCATCTCTTCATTGACTCCCTGCTGA...GCATCTGGAGACTAAGCATATATGCACATACACAGAACAACGGGACCAGGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | TCCCGTTGTTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGTCCCATGGCTTCTCCAATGTTaGATCCTGGCTGGAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCSVYVHICLVSRCGVPWLLQC*ILAGKC Trigger: GCACTTTCCAGCCAGGATGCAACATTGGAGAAGCCA...TGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAACAACGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACGGGCGGCCACAAGTTTaGGCACCCAACTCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: TFVLYYIGTTSFLLARANGRPQV*APNSHT Trigger: TGTATGAGAGTTGGGTGCCCAAACTTGTGGCCGCCC...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR TCA 90 bp | TCATTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCAAGATGACCTTTTTCTaGGTCTCTCCGGCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SLEQLWKLISALVLVPLFKMTFF*VSPAFT Trigger: AGTGAAAGCCGGAGAGACTCAGAAAAAGGTCATCTT...GAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATTTCCCTTCTGCAGATaGGAAACTTTCTCCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQLWKLISALVLVPLFCVFPFCR*ETFSLA Trigger: TGCTAGGGAGAAAGTTTCTCATCTGCAGAAGGGAAA...TACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTATCTTCCCGCGTCTGCTaGGGCCACCCCTCCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLSSRVC*GHPSSE Trigger: TTCCGAGGAGGGGTGGCCGCAGCAGACGCGGGAAGA...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | AAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATATGAAGGCCTGGTTGTGTTaGTTGCCATCCTCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLISALVLVPLFCVCAYMKAWLC*LPSSVP Trigger: TGGGACTGAGGATGGCAAGCAACACAACCAGGCCTT...CATATATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGTGCACCTGTATGCCTTaGTGGGGTTTTCTTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLCTCMP*WGFLHS Trigger: TGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCA...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | ACTTGTACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTTGCCCTACTGGTTTCTaGATTCCAATACTTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TCTLLWWDQGSGLHEPCLCPTGF*IPILRP Trigger: TGGTCGAAGTATTGGAATCCAGAAACCAGTAGGGCA...AAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | GTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATGCCCTACTGGTTTCTaGATTCCAATACTTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VETDFCSGPGPVVLCMCICPTGF*IPILRP Trigger: TGGTCGAAGTATTGGAATCCAGAAACCAGTAGGGCA...TATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATAGGAAAGTGCCTCCATTaGGATAAATGTCAACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VETDFCSGPGPVVLCMCIGKCLH*DKCQHA Trigger: GGCATGTTGACATTTATCCCAATGGAGGCACTTTCC...TATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACATGTTGCATCCTGGCTaGAAAGTGCCTCCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFVLYYIGTTSFLLARANMLHPG*KVPPLG Trigger: TCCCAATGGAGGCACTTTCCAGCCAGGATGCAACAT...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | ACATATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGCAATCACACGGATaGCTTCTCCAATGTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TYSGIDTKGQQSLEQLWKLQSHG*LLQCCI Trigger: GATGCAACATTGGAGAAGCCATCCGTGTGATTGCAG...TTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| 3UTR CAA 72 bp | CTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTaGTTCTGTGTATGTGCATATATGCTTAGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWKLISALVLVP*FCVCAYMLSLQ Trigger: CTGGAGACTAAGCATATATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| 3UTR CAA 72 bp | ACATATTCGGGTATTGACACCAAGGGTCAGCAGTCATaGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TYSGIDTKGQQS*EQLWKLISALV Trigger: GACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACTTTGCTTTCGATGTCTaGGAAATCTCTTCCCGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: TFVLYYIGTTSFLLARANFAFDV*EISSRV Trigger: GACGCGGGAAGAGATTTCTCAGACATCGAAAGCAAA...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | ACATATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAAATCCTGGCTGGAAAGTaGCTCCATTGGGATAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TYSGIDTKGQQSLEQLWKILAGK*LHWDKC Trigger: ACATTTATCCCAATGGAGGCACTTTCCAGCCAGGAT...TTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCTCCGAGTCCTCTCTCTaGAATCACACGGATGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HHKSILQITTTDFPVFTSSESSL*NHTDGF Trigger: GAAGCCATCCGTGTGATTGCAGAGAGAGGACTCGGA...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAAGGCTTCCTTGGAGTTaGACCTGTATGCCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTRLPWS*TCMPCW Trigger: CCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAAAGGCCTGGTTGTGTTaGTTGCCATCCTCAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTKAWLC*LPSSVP Trigger: TGGGACTGAGGATGGCAAGCAACACAACCAGGCCTT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACACAGGAGAAAGGCGACTaGGGGCTTCTGCATACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTQEKGD*GLLHTQ Trigger: TTGAGTATGCAGAAGCCCCCAGTCGCCTTTCTCCTG...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | ACTTGTACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTGTCAACATGCCCTACTaGTTTCTGGATTCCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: TCTLLWWDQGSGLHEPCLVNMPY*FLDSNT Trigger: AGTATTGGAATCCAGAAACCAGTAGGGCATGTTGAC...AAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACCTGCAATCACACGGATaGCTTCTCCAATGTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TFVLYYIGTTSFLLARANLQSHG*LLQCCI Trigger: GATGCAACATTGGAGAAGCCATCCGTGTGATTGCAG...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACTCTCAAAGGCTTCCTTaGAGTTGCACCTGTATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFVLYYIGTTSFLLARANSQRLP*SCTCMP Trigger: AGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGA...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| 3UTR CAA 72 bp | AGTCTAGGTTTTGTATCTCTGTTGACTTGTACTTTGTaGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGFVSLLTCTL*WWDQGSGLHEP Trigger: TGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGTCAACAGAGATACAAAACCTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR TCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAAATACTTCGACCAGGTaGCCCCCTGGTAAATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTNTSTR*PPGKCV Trigger: CACACATTTACCAGGGGGTCACCTGGTCGAAGTATT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACGGAAAGTGCCTCCATTaGGATAAATGTCAACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFVLYYIGTTSFLLARANGKCLH*DKCQHA Trigger: GGCATGTTGACATTTATCCCAATGGAGGCACTTTCC...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTAGAGCACTTCACCAGCTaGTCCACGTCTCCGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLEHFTS*STSPSP Trigger: AGGACTCGGAGACGTGGACCAGCTGGTGAAGTGCTC...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | ACTTGTACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTTTCAGAGACTTGTCATaGCATTTCACAAACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCTLLWWDQGSGLHEPCLFRDLS*HFTNTA Trigger: AGCAGTGTTTGTGAAATGCCATGACAAGTCTCTGAA...AAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR CCA 90 bp | TCCCGTTGTTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGTCCCATTCAGAGACTTGTCATaGCATTTCACAAACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCSVYVHICLVSRCGVPFRDLS*HFTNTA Trigger: AGCAGTGTTTGTGAAATGCCATGACAAGTCTCTGAA...TGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAACAACGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| CDS-3UTR TCA 90 bp | TTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGTCCCATTTTGTTTTTTGCTTTCGATGTCTaGGAAATCTCTTCCCGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCVCAYMLSLQMRCPILFFAFDV*EISSRV Trigger: GACGCGGGAAGAGATTTCTCAGACATCGAAAGCAAA...AAACAAAATGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| CDS-3UTR TCA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCCTGCTAATCCAGGAATaGGATGACAAGTGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HHKSILQITTTDFPVFTSLLIQE*DDKCPQ Trigger: CTGAGGACACTTGTCATCTCATTCCTGGATTAGCAG...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGTCCTTAGGGCAAATTTaGTTTCGATGTCTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLSLGQI*FRCLRN Trigger: ATTTCTCAGACATCGAAAGCAAATTTGCCCTAAGGA...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR GCA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTAATTGGTCAGACTTCCTaGTACGCCAGCAGCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLIGQTS*YASSMG Trigger: GCCCATGCTGCTGGCGTAGCAGGAAGTCTGACCAAT...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CCA 90 bp | TCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGTCCCATTTTGTTTTCTGCTGTGGTTGAAGTaGCAGTTAGACACAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVYVHICLVSRCGVPFCFLLWLK*QLDTES Trigger: AGACTCTGTGTCTAACTGCCACTTCAACCACAGCAG...AAAACAAAATGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGTCCCATTTTGTTTTCTCAAAGGCTTCCTTaGAGTTGCACCTGTATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FCVCAYMLSLQMRCPILFSQRLP*SCTCMP Trigger: AGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGA...AAACAAAATGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAAAGATGACCTTTTTCTaGGTCTCTCCGGCTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTKMTFF*VSPAFT Trigger: AGTGAAAGCCGGAGAGACTCAGAAAAAGGTCATCTT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR TCA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCTTTCCCTTCTGCAGATaGGAAACTTTCTCCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HHKSILQITTTDFPVFTSFPFCR*ETFSLA Trigger: TGCTAGGGAGAAAGTTTCTCATCTGCAGAAGGGAAA...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR GCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAATCCTGGCTGGAAAGTaGCTCCATTGGGATAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTILAGK*LHWDKC Trigger: ACATTTATCCCAATGGAGGCACTTTCCAGCCAGGAT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS-3UTR GCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACATGCACCTGTATGCCTTaGTGGGGTTTTCTTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTCTCMP*WGFLHS Trigger: TGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCA...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR GCA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTATGGCTTCTCCAATGTTaGATCCTGGCTGGAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLWLLQC*ILAGKC Trigger: GCACTTTCCAGCCAGGATGCAACATTGGAGAAGCCA...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CCA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAAAAGTTAGGCCCAGCTaGATCCAAACCAGTAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AWMCIYCNELAIMGMPVTKVRPS*IQTSNS Trigger: AGAATTACTGGTTTGGATCCAGCTGGGCCTAACTTT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CCA 90 bp | TTCTGTGTATGTGCATATATGCTTAGTCTCCAGATGCGGTGTCCCATTTTGTTTGTCAACATGCCCTACTaGTTTCTGGATTCCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: FCVCAYMLSLQMRCPILFVNMPY*FLDSNT Trigger: AGTATTGGAATCCAGAAACCAGTAGGGCATGTTGAC...AAACAAAATGGGACACCGCATCTGGAGACTAAGCATATATGCACATACACAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAGTTTTTAGAACAATATGCTATAACTTATTCAGCATGCTCTTGGTCACATAATCCAGGAATGAGATaGCAAGTGTCCTCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PEFLEQYAITYSACSWSHNPGMR*QVSSAV Trigger: CACAGCTGAGGACACTTGTCATCTCATTCCTGGATT...ATGTGACCAAGAGCATGCTGAATAAGTTATAGCATATTGTTCTAAAAACTCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CCA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTACTGCTGTGGTTGAAGTaGCAGTTAGACACAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLLLWLK*QLDTES Trigger: AGACTCTGTGTCTAACTGCCACTTCAACCACAGCAG...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR GCA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCTCCTTAGGGCAAATTTaGTTTCGATGTCTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HHKSILQITTTDFPVFTSSLGQI*FRCLRN Trigger: ATTTCTCAGACATCGAAAGCAAATTTGCCCTAAGGA...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| 3UTR CAA 72 bp | CATGGCGGAGATGAGTCTCAAATGAAATACAAAGTATaGGATATTGGGCATTTCAAATTGATGAAAACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HGGDESQMKYKV*DIGHFKLMKTS Trigger: ACTTGTTTTCATCAATTTGAAATGCCCAATATCCAATACTTTGTATTTCATTTGAGACTCATCTCCGCCATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS CCA 90 bp | CCAGCTGGTCCACGTCTCCGAGTCCTCTCTCTGCAATCACACGGATaGCTTCTCCAATGTTGCATCCTGGCTGGAAAGTGCCTCCATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAGPRLRVLSLQSHG*LLQCCILAGKCLHW Trigger: CCAATGGAGGCACTTTCCAGCCAGGATGCAACATTGGAGAAGCCATCCGTGTGATTGCAGAGAGAGGACTCGGAGACGTGGACCAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
||
| CDS TCA 90 bp | GCCTTGCTGGGGTTTTCTTCATTCAGCAGGGAGTCAATGAAGAGATaGATGGAGCGCTCGTGCGAGCACTTCACCAGCTGGTCCACGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLGFSSFSRESMKR*MERSCEHFTSWSTS Trigger: AGACGTGGACCAGCTGGTGAAGTGCTCGCACGAGCGCTCCATTCATCTCTTCATTGACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CCA 90 bp | CTATTGACCTTCTTATTGGTCAGACTTCCTGCTACGCCAGCAGCATaGGCTCCAAGGCTGTACCCTAAGAGGTGGACGTTGTCTAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTFLLVRLPATPAA*APRLYPKRWTLSRG Trigger: CCCCCTAGACAACGTCCACCTCTTAGGGTACAGCCTTGGAGCCCATGCTGCTGGCGTAGCAGGAAGTCTGACCAATAAGAAGGTCAATAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 90 bp | GACAAGTGTCCTCAGCTGTGTCTTCAGGGGTCCTTAGGGCAAATTTaGTTTCGATGTCTGAGAAATCTCTTCCCGCGTCTGCTGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DKCPQLCLQGSLGQI*FRCLRNLFPRLLRP Trigger: TGGCCGCAGCAGACGCGGGAAGAGATTTCTCAGACATCGAAAGCAAATTTGCCCTAAGGACCCCTGAAGACACAGCTGAGGACACTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGATGGCTTCTCCAATGTaGCATCCTGGCTGGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VNQAGLELRNPPASACQVMASPM*HPGWKV Trigger: CACTTTCCAGCCAGGATGCAACATTGGAGAAGCCAT...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS TCA 90 bp | ACCTGTATGCCTTGCTGGGGTTTTCTTCATTCAGCAGGGAGTCAATaGAGAGATGAATGGAGCGCTCGTGCGAGCACTTCACCAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TCMPCWGFLHSAGSQ*RDEWSARASTSPAG Trigger: ACCAGCTGGTGAAGTGCTCGCACGAGCGCTCCATTCATCTCTTCATTGACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGCATACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CCA 90 bp | CCCGTTACCGTCCATCCATGGATCACCACGAAGGTCTTGCTGCTGTaGTTGAAGTGGCAGTTAGACACAGAGTCTGCTAATCCAGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PVTVHPWITTKVLLL*LKWQLDTESANPGM Trigger: CATTCCTGGATTAGCAGACTCTGTGTCTAACTGCCACTTCAACCACAGCAGCAAGACCTTCGTGGTGATCCATGGATGGACGGTAACGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGTTGCACCTGTATGCCTaGCTGGGGTTTTCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VNQAGLELRNPPASACQVLHLYA*LGFSSF Trigger: GAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAA...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS TCA 90 bp | GATGAATCTGGCCACATCATTTCCCACCAGCTTGGTGTAGCCAGCTaGCACTGGATAATGTTGCTGGGCCCGATACAACCAGTCTACTAC | + |
|
Preference number: 5 (lower is better) Translates to: DESGHIISHQLGVAS*HWIMLLGPIQPVYY Trigger: GTAGTAGACTGGTTGTATCGGGCCCAGCAACATTATCCAGTGTCAGCTGGCTACACCAAGCTGGTGGGAAATGATGTGGCCAGATTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 90 bp | CAGGCAGAGCCCTTTCTCAAAGGCTTCCTTGGAGTTGCACCTGTATaGCTTGCTGGGGTTTTCTTCATTCAGCAGGGAGTCAATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAEPFLKGFLGVAPV*LAGVFFIQQGVNEE Trigger: CTCTTCATTGACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAAAGGGCTCTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 90 bp | CTCCGAGTCCTCTCTCTGCAATCACACGGATGGCTTCTCCAATGTTaGATCCTGGCTGGAAAGTGCCTCCATTGGGATAAATGTCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LRVLSLQSHGWLLQC*ILAGKCLHWDKCQH Trigger: ATGTTGACATTTATCCCAATGGAGGCACTTTCCAGCCAGGATGCAACATTGGAGAAGCCATCCGTGTGATTGCAGAGAGAGGACTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 90 bp | TTCTACAACTCAGGCAGAGCCCTTTCTCAAAGGCTTCCTTGGAGTTaGACCTGTATGCCTTGCTGGGGTTTTCTTCATTCAGCAGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FYNSGRALSQRLPWS*TCMPCWGFLHSAGS Trigger: ACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAAAGGGCTCTGCCTGAGTTGTAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CCA 90 bp | TCCTCTCTCTGCAATCACACGGATGGCTTCTCCAATGTTGCATCCTaGCTGGAAAGTGCCTCCATTGGGATAAATGTCAACATGCCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: SSLCNHTDGFSNVAS*LESASIGINVNMPY Trigger: GTAGGGCATGTTGACATTTATCCCAATGGAGGCACTTTCCAGCCAGGATGCAACATTGGAGAAGCCATCCGTGTGATTGCAGAGAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | GTAAACCAGGCTGGCCTTGAACTCAGAAATCCTCCTGCCTCTGCCTGCCAAGTGGTCCTTAGGGCAAATTaGCTTTCGATGTCTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VNQAGLELRNPPASACQVVLRAN*LSMSEK Trigger: TTTCTCAGACATCGAAAGCAAATTTGCCCTAAGGAC...CACTTGGCAGGCAGAGGCAGGAGGATTTCTGAGTTCAAGGCCAGCCTGGTTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | TCATTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTCCTCCTCCATCCAGTaGATGAATCTGGCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLEQLWKLISALVLVPLFSSSIQ*MNLATS Trigger: TGATGTGGCCAGATTCATCAACTGGATGGAGGAGGA...GAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | TCATTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCATGGCTTCTCCAATGTaGCATCCTGGCTGGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLEQLWKLISALVLVPLFMASPM*HPGWKV Trigger: CACTTTCCAGCCAGGATGCAACATTGGAGAAGCCAT...GAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CAA 90 bp | GTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATAAAGGCTTCCTTGGAGTaGCACCTGTATGCCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VETDFCSGPGPVVLCMCIKASLE*HLYALL Trigger: CAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTT...TATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTTTCTCAAAGGCTTCCTaGGAGTTGCACCTGTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LEQLWKLISALVLVPLFCFSKAS*ELHLYA Trigger: GGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAA...ACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTCTTCAGGTACATCTaGCTGCTTCTCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEQLWKLISALVLVPLFCVFRYI*LLLLAL Trigger: CAGAGCCAAGAGAAGCAGCAAGATGTACCTGAAGAC...ACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS TCA 90 bp | ACACTGGATAATGTTGCTGGGCCCGATACAACCAGTCTACTACAATaGCATTGGAGTCAGGTTCTCTCTTGTACAGGGCGGCCACAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLDNVAGPDTTSLLQ*HWSQVLSCTGRPQV Trigger: AACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACTCCAATGTCATTGTAGTAGACTGGTTGTATCGGGCCCAGCAACATTATCCAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
||
| CDS-3UTR CAA 90 bp | TATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAACTGGTCTTGCTGCTGTGGTaGAAGTGGCAGTTAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: YSGIDTKGQQSLEQLWKLVLLLW*KWQLDT Trigger: TGTGTCTAACTGCCACTTCAACCACAGCAGCAAGAC...CAGTTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CAA 90 bp | AAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATGTGCATATATGGAGTCAGGTTCTCTCTaGTACAGGGCGGCCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLISALVLVPLFCVCAYMESGSL*YRAATS Trigger: ACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACTC...CATATATGCACATACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTCTATTGACCTTCTTATaGGTCAGACTTCCTGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: GATVETDFCSGPGPVVLCLLTFL*VRLPAT Trigger: CGTAGCAGGAAGTCTGACCAATAAGAAGGTCAATAG...ACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGTACTTTGTTGTGGTGGGACCAAGGGTCAGGACTTCATGAGCCATGTCTTGTCTTCAGGTACATCTaGCTGCTTCTCTTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TCTLLWWDQGSGLHEPCLVFRYI*LLLLAL Trigger: CAGAGCCAAGAGAAGCAGCAAGATGTACCTGAAGAC...AAGACATGGCTCATGAAGTCCTGACCCTTGGTCCCACCACAACAAAGTACAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
||
| CDS GCA 90 bp | ATCTACAAAATCAGCGTCATCAGGAGAAAGGCGACTGGGGGCTTCTaGATACTCAAAGTTAGGCCCAGCTGGATCCAAACCAGTAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: IYKISVIRRKATGGF*ILKVRPSWIQTSNS Trigger: AGAATTACTGGTTTGGATCCAGCTGGGCCTAACTTTGAGTATGCAGAAGCCCCCAGTCGCCTTTCTCCTGATGACGCTGATTTTGTAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
||
| CDS CCA 90 bp | GATTCTTTCTACAACTCAGGCAGAGCCCTTTCTCAAAGGCTTCCTTaGAGTTGCACCTGTATGCCTTGCTGGGGTTTTCTTCATTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DSFYNSGRALSQRLP*SCTCMPCWGFLHSA Trigger: TGCTGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAAAGGGCTCTGCCTGAGTTGTAGAAAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | ACCTTTGTCCTATATTACATAGGCACAACCAGCTTTCTCCTAGCAAGGGCTAACAAGGCTTCCTTGGAGTaGCACCTGTATGCCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TFVLYYIGTTSFLLARANKASLE*HLYALL Trigger: CAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTT...GTTAGCCCTTGCTAGGAGAAAGCTGGTTGTGCCTATGTAATATAGGACAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | TCATTGGAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCGTCCTTAGGGCAAATTaGCTTTCGATGTCTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLEQLWKLISALVLVPLFVLRAN*LSMSEK Trigger: TTTCTCAGACATCGAAAGCAAATTTGCCCTAAGGAC...GAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTCCAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | GAGCAACTGTGGAAACTGATTTCTGCTCTGGTCCTGGTCCCGTTGTTCTGTGTATCTACTACAATGACATaGGAGTCAGGTTCTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EQLWKLISALVLVPLFCVSTTMT*ESGSLL Trigger: CAAGAGAGAACCTGACTCCAATGTCATTGTAGTAGA...TACACAGAACAACGGGACCAGGACCAGAGCAGAAATCAGTTTCCACAGTTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | ACATATTCGGGTATTGACACCAAGGGTCAGCAGTCATTGGAGCAACTGTGGAAATTGCACCTGTATGCCTaGCTGGGGTTTTCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: TYSGIDTKGQQSLEQLWKLHLYA*LGFSSF Trigger: GAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAA...TTTCCACAGTTGCTCCAATGACTGCTGACCCTTGGTGTCAATACCCGAATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTAAGGGCGGCCACAAGTTaGGGCACCCAACTCTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLRAATS*GTQLSY Trigger: GTATGAGAGTTGGGTGCCCAAACTTGTGGCCGCCCT...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACATTCTCAAAGGCTTCCTaGGAGTTGCACCTGTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWMCIYCNELAIMGMPVTFSKAS*ELHLYA Trigger: GGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAA...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | GCATGGATGTGTATATACTGTAATGAATTAGCAATAATGGGGATGCCGGTGACAAGGAGTAGGTTTTATTaGTGGAAACCTCGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AWMCIYCNELAIMGMPVTRSRFY*WKPRAG Trigger: CCCTGCCCGAGGTTTCCACAAATAAAACCTACTCCT...TGTCACCGGCATCCCCATTATTGCTAATTCATTACAGTATATACACATCCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTAGAGTCAGGTTCTCTCTaGTACAGGGCGGCCACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLESGSL*YRAATS Trigger: ACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACTC...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTAGTCTTGCTGCTGTGGTaGAAGTGGCAGTTAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLVLLLW*KWQLDT Trigger: TGTGTCTAACTGCCACTTCAACCACAGCAGCAAGAC...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | CACCACAAATCTATACTGCAGATAACCACAACAGACTTTCCAGTGTTTACAAGCTCTACTACAATGACATaGGAGTCAGGTTCTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HHKSILQITTTDFPVFTSSTTMT*ESGSLL Trigger: CAAGAGAGAACCTGACTCCAATGTCATTGTAGTAGA...GCTTGTAAACACTGGAAAGTCTGTTGTGGTTATCTGCAGTATAGATTTGTGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTATCCTCCTCCATCCAGTaGATGAATCTGGCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLSSSIQ*MNLATS Trigger: TGATGTGGCCAGATTCATCAACTGGATGGAGGAGGA...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS-3UTR CAA 90 bp | CCTGAGTTTTTAGAACAATATGCTATAACTTATTCAGCATGCTCTTGGTCACATAGGAGTAGGTTTTATTaGTGGAAACCTCGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PEFLEQYAITYSACSWSHRSRFY*WKPRAG Trigger: CCCTGCCCGAGGTTTCCACAAATAAAACCTACTCCT...ATGTGACCAAGAGCATGCTGAATAAGTTATAGCATATTGTTCTAAAAACTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168401.2 |
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| CDS-3UTR CAA 90 bp | AGACTTTCCAGTGTTTACAAGCATTCTTACATACCCACACATTATTTACAGCTACTATTGACCTTCTTATaGGTCAGACTTCCTGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: RLSSVYKHSYIPTHYLQLLLTFL*VRLPAT Trigger: CGTAGCAGGAAGTCTGACCAATAAGAAGGTCAATAG...TAGCTGTAAATAATGTGTGGGTATGTAAGAATGCTTGTAAACACTGGAAAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015712.15 |
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| CDS CCA 72 bp | GCTGCGGCCACCCCTCCTCGGAAGGCGGTCAAACTCTaGAGCCAAACTCCCAGGACCACCAGGAGCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAATPPRKAVKL*SQTPRTTRSRA Trigger: AGCCCTGCTCCTGGTGGTCCTGGGAGTTTGGCTCCAGAGTTTGACCGCCTTCCGAGGAGGGGTGGCCGCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS TCA 72 bp | TCTGAGTCTCTCCGGCTTTCACTCGGATCCTCTCGATaGCGAAGCTGGGGCTGCTCCACCAGTCAGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SESLRLSLGSSR*RSWGCSTSQAS Trigger: GCTGGCCTGACTGGTGGAGCAGCCCCAGCTTCGTCATCGAGAGGATCCGAGTGAAAGCCGGAGAGACTCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 72 bp | CTTCACCAGCTGGTCCACGTCTCCGAGTCCTCTCTCTaGAATCACACGGATGGCTTCTCCAATGTTGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: LHQLVHVSESSL*NHTDGFSNVAS Trigger: GGATGCAACATTGGAGAAGCCATCCGTGTGATTGCAGAGAGAGGACTCGGAGACGTGGACCAGCTGGTGAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS TCA 72 bp | GGCCACATCATTTCCCACCAGCTTGGTGTAGCCAGCTaGCACTGGATAATGTTGCTGGGCCCGATACAACCA | + |
|
Preference number: 6 (lower is better) Translates to: GHIISHQLGVAS*HWIMLLGPIQP Trigger: TGGTTGTATCGGGCCCAGCAACATTATCCAGTGTCAGCTGGCTACACCAAGCTGGTGGGAAATGATGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 72 bp | ATCAGCGTCATCAGGAGAAAGGCGACTGGGGGCTTCTaGATACTCAAAGTTAGGCCCAGCTGGATCCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: ISVIRRKATGGF*ILKVRPSWIQT Trigger: GGTTTGGATCCAGCTGGGCCTAACTTTGAGTATGCAGAAGCCCCCAGTCGCCTTTCTCCTGATGACGCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CCA 72 bp | AGTCAGGTTCTCTCTTGTACAGGGCGGCCACAAGTTTaGGCACCCAACTCTCATACATTCCCGTTACCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SQVLSCTGRPQV*APNSHTFPLPS Trigger: GGACGGTAACGGGAATGTATGAGAGTTGGGTGCCCAAACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CCA 72 bp | TCGGCCACTGTGCCGTACAGAGAAATCTCGAAGGCCTaGTTGTGTTGCTTGCCATCCTCAGTCCCAGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SATVPYREISKA*LCCLPSSVPEK Trigger: CTTTTCTGGGACTGAGGATGGCAAGCAACACAACCAGGCCTTCGAGATTTCTCTGTACGGCACAGTGGCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | CCCGTTACCGTCCATCCATGGATCACCACGAAGGTCTaGCTGCTGTGGTTGAAGTGGCAGTTAGACACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PVTVHPWITTKV*LLWLKWQLDTE Trigger: CTCTGTGTCTAACTGCCACTTCAACCACAGCAGCAAGACCTTCGTGGTGATCCATGGATGGACGGTAACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | GAGTCAGGTTCTCTCTTGTACAGGGCGGCCACAAGTTaGGGCACCCAACTCTCATACATTCCCGTTACCGTC | + |
|
Preference number: 6 (lower is better) Translates to: ESGSLLYRAATS*GTQLSYIPVTV Trigger: GACGGTAACGGGAATGTATGAGAGTTGGGTGCCCAAACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS TCA 72 bp | GGGTTTTCTTCATTCAGCAGGGAGTCAATGAAGAGATaGATGGAGCGCTCGTGCGAGCACTTCACCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GFSSFSRESMKR*MERSCEHFTSW Trigger: CCAGCTGGTGAAGTGCTCGCACGAGCGCTCCATTCATCTCTTCATTGACTCCCTGCTGAATGAAGAAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | TGCTGGGCCCGATACAACCAGTCTACTACAATGACATaGGAGTCAGGTTCTCTCTTGTACAGGGCGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: CWARYNQSTTMT*ESGSLLYRAAT Trigger: TGTGGCCGCCCTGTACAAGAGAGAACCTGACTCCAATGTCATTGTAGTAGACTGGTTGTATCGGGCCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 90 bp | ATGACATTGGAGTCAGGTTCTCTCTTGTACAGGGCGGCCACAAGTTaGGGCACCCAACTCTCATACATTCCCGTTACCGTCCATCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: MTLESGSLLYRAATS*GTQLSYIPVTVHPW Trigger: CCATGGATGGACGGTAACGGGAATGTATGAGAGTTGGGTGCCCAAACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACTCCAATGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 90 bp | TTAGGCCCAGCTGGATCCAAACCAGTAATTCTATTGACCTTCTTATaGGTCAGACTTCCTGCTACGCCAGCAGCATGGGCTCCAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGPAGSKPVILLTFL*VRLPATPAAWAPRL Trigger: CAGCCTTGGAGCCCATGCTGCTGGCGTAGCAGGAAGTCTGACCAATAAGAAGGTCAATAGAATTACTGGTTTGGATCCAGCTGGGCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 90 bp | CTCGGCCACTGTGCCGTACAGAGAAATCTCGAAGGCCTGGTTGTGTaGCTTGCCATCCTCAGTCCCAGAAAAGTGAATCTTGACTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGHCAVQRNLEGLVV*LAILSPRKVNLDLV Trigger: TACCAAGTCAAGATTCACTTTTCTGGGACTGAGGATGGCAAGCAACACAACCAGGCCTTCGAGATTTCTCTGTACGGCACAGTGGCCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS TCA 72 bp | CCTTGCTGGGGTTTTCTTCATTCAGCAGGGAGTCAATaGAGAGATGAATGGAGCGCTCGTGCGAGCACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCWGFLHSAGSQ*RDEWSARASTS Trigger: TGAAGTGCTCGCACGAGCGCTCCATTCATCTCTTCATTGACTCCCTGCTGAATGAAGAAAACCCCAGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 72 bp | CCTCAGCTGTGTCTTCAGGGGTCCTTAGGGCAAATTTaGTTTCGATGTCTGAGAAATCTCTTCCCGCGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PQLCLQGSLGQI*FRCLRNLFPRL Trigger: CAGACGCGGGAAGAGATTTCTCAGACATCGAAAGCAAATTTGCCCTAAGGACCCCTGAAGACACAGCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 72 bp | CCCTTTCTCAAAGGCTTCCTTGGAGTTGCACCTGTATaGCTTGCTGGGGTTTTCTTCATTCAGCAGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PFLKGFLGVAPV*LAGVFFIQQGV Trigger: GACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | CAGTCTACTACAATGACATTGGAGTCAGGTTCTCTCTaGTACAGGGCGGCCACAAGTTTGGGCACCCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: QSTTMTLESGSL*YRAATSLGTQL Trigger: GAGTTGGGTGCCCAAACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACTCCAATGTCATTGTAGTAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 90 bp | GTTACCGTCCATCCATGGATCACCACGAAGGTCTTGCTGCTGTGGTaGAAGTGGCAGTTAGACACAGAGTCTGCTAATCCAGGAATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VTVHPWITTKVLLLW*KWQLDTESANPGMR Trigger: TCTCATTCCTGGATTAGCAGACTCTGTGTCTAACTGCCACTTCAACCACAGCAGCAAGACCTTCGTGGTGATCCATGGATGGACGGTAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS TCA 72 bp | AATGTTGCTGGGCCCGATACAACCAGTCTACTACAATaGCATTGGAGTCAGGTTCTCTCTTGTACAGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: NVAGPDTTSLLQ*HWSQVLSCTGR Trigger: CCGCCCTGTACAAGAGAGAACCTGACTCCAATGTCATTGTAGTAGACTGGTTGTATCGGGCCCAGCAACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 72 bp | AGTAATTCTATTGACCTTCTTATTGGTCAGACTTCCTaGTACGCCAGCAGCATGGGCTCCAAGGCTGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: SNSIDLLIGQTS*YASSMGSKAVP Trigger: GGGTACAGCCTTGGAGCCCATGCTGCTGGCGTAGCAGGAAGTCTGACCAATAAGAAGGTCAATAGAATTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS GCA 72 bp | TCAGGCAGAGCCCTTTCTCAAAGGCTTCCTTGGAGTTaGACCTGTATGCCTTGCTGGGGTTTTCTTCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGRALSQRLPWS*TCMPCWGFLHS Trigger: TGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAAAGGGCTCTGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CCA 72 bp | GTCCATCCATGGATCACCACGAAGGTCTTGCTGCTGTaGTTGAAGTGGCAGTTAGACACAGAGTCTGCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: VHPWITTKVLLL*LKWQLDTESAN Trigger: ATTAGCAGACTCTGTGTCTAACTGCCACTTCAACCACAGCAGCAAGACCTTCGTGGTGATCCATGGATGGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | TCCTCAGCTGTGTCTTCAGGGGTCCTTAGGGCAAATTaGCTTTCGATGTCTGAGAAATCTCTTCCCGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSAVSSGVLRAN*LSMSEKSLPAS Trigger: AGACGCGGGAAGAGATTTCTCAGACATCGAAAGCAAATTTGCCCTAAGGACCCCTGAAGACACAGCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | CATCCATGGATCACCACGAAGGTCTTGCTGCTGTGGTaGAAGTGGCAGTTAGACACAGAGTCTGCTAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: HPWITTKVLLLW*KWQLDTESANP Trigger: TGGATTAGCAGACTCTGTGTCTAACTGCCACTTCAACCACAGCAGCAAGACCTTCGTGGTGATCCATGGATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 90 bp | TCATACATTCCCGTTACCGTCCATCCATGGATCACCACGAAGGTCTaGCTGCTGTGGTTGAAGTGGCAGTTAGACACAGAGTCTGCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SYIPVTVHPWITTKV*LLWLKWQLDTESAN Trigger: ATTAGCAGACTCTGTGTCTAACTGCCACTTCAACCACAGCAGCAAGACCTTCGTGGTGATCCATGGATGGACGGTAACGGGAATGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 90 bp | CGATTCTTTCTACAACTCAGGCAGAGCCCTTTCTCAAAGGCTTCCTaGGAGTTGCACCTGTATGCCTTGCTGGGGTTTTCTTCATTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFFLQLRQSPFSKAS*ELHLYALLGFSSFS Trigger: GCTGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAAAGGGCTCTGCCTGAGTTGTAGAAAGAATCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS TCA 72 bp | GAAACTTTCTCCCTAGCACAGAAGATGACCTTTTTCTaGGTCTCTCCGGCTTTCACTCGGATCCTCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: ETFSLAQKMTFF*VSPAFTRILSM Trigger: CATCGAGAGGATCCGAGTGAAAGCCGGAGAGACTCAGAAAAAGGTCATCTTCTGTGCTAGGGAGAAAGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CCA 72 bp | TGCAATCACACGGATGGCTTCTCCAATGTTGCATCCTaGCTGGAAAGTGCCTCCATTGGGATAAATGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CNHTDGFSNVAS*LESASIGINVN Trigger: GTTGACATTTATCCCAATGGAGGCACTTTCCAGCCAGGATGCAACATTGGAGAAGCCATCCGTGTGATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | TTCTCAAAGGCTTCCTTGGAGTTGCACCTGTATGCCTaGCTGGGGTTTTCTTCATTCAGCAGGGAGTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: FSKASLELHLYA*LGFSSFSRESM Trigger: CATTGACTCCCTGCTGAATGAAGAAAACCCCAGCAAGGCATACAGGTGCAACTCCAAGGAAGCCTTTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 72 bp | TGTGCCGTACAGAGAAATCTCGAAGGCCTGGTTGTGTaGCTTGCCATCCTCAGTCCCAGAAAAGTGAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: CAVQRNLEGLVV*LAILSPRKVNL Trigger: AAGATTCACTTTTCTGGGACTGAGGATGGCAAGCAACACAACCAGGCCTTCGAGATTTCTCTGTACGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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| CDS CAA 90 bp | CGATACAACCAGTCTACTACAATGACATTGGAGTCAGGTTCTCTCTaGTACAGGGCGGCCACAAGTTTGGGCACCCAACTCTCATACATT | + |
|
Preference number: 6 (lower is better) Translates to: RYNQSTTMTLESGSL*YRAATSLGTQLSYI Trigger: AATGTATGAGAGTTGGGTGCCCAAACTTGTGGCCGCCCTGTACAAGAGAGAACCTGACTCCAATGTCATTGTAGTAGACTGGTTGTATCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015712.15 ENSMUST00000168401.2 |
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