RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPIN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000020593

Ensembl transcript IDs: ENSMUST00000067124.6, ENSMUST00000111067.10, ENSMUST00000221146.2, ENSMUST00000221230.2, ENSMUST00000221297.2, ENSMUST00000222989.2, ENSMUST00000238839.2, ENSMUST00000239165.2

Found 672 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCAAGTCCTAACATGGCATCAGGGAGCCACCTGGACAGCGGGCTaGAGAGGGCATTTGAAAAGAGATGCCAGAGCTTCCCCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: AQVLTWHQGATWTAG*RGHLKRDARASPGH
Trigger: ATGCCCAGGGGAAGCTCTGGCATCTCTTTTCAAATGCCCTCTGCAGCCCGCTGTCCAGGTGGCTCCCTGATGCCATGTTAGGACTTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR GCA 90 bp GCGAGGCCCATGTTCCCTTCACTTAGACTCGGGACACAGCCTGTGTaGAGAAGGTGGCATGGATGTCTCTGTCGTGGAAATGTGTCCCTG +
Preference number: 1 (lower is better)
Translates to: ARPMFPSLRLGTQPV*RRWHGCLCRGNVSL
Trigger: CAGGGACACATTTCCACGACAGAGACATCCATGCCACCTTCTGCACACAGGCTGTGTCCCGAGTCTAAGTGAAGGGAACATGGGCCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR GCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTaGAGGCCAGTGAGCTCGTATACAGTCCACAGCAATCAAAATACA +
Preference number: 1 (lower is better)
Translates to: MPELPLGMRETAVNL*RPVSSYTVHSNQNT
Trigger: TGTATTTTGATTGCTGTGGACTGTATACGAGCTCACTGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp CGGGACACAGCCTGTGTGCAGAAGGTGGCATGGATGTCTCTGTCGTaGAAATGTGTCCCTGATGCTACTGATCCCTATGCACATCAGAGT +
Preference number: 1 (lower is better)
Translates to: RDTACVQKVAWMSLS*KCVPDATDPYAHQS
Trigger: ACTCTGATGTGCATAGGGATCAGTAGCATCAGGGACACATTTCCACGACAGAGACATCCATGCCACCTTCTGCACACAGGCTGTGTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp TGCCTGGACAGGGCTCCTGAAGATTTTCACAGAGATCATAGAGTGTaGTTTTGTGGGAGGTGTGCTCTGTTTCAGGGTAGAGTGACAGGG +
Preference number: 1 (lower is better)
Translates to: CLDRAPEDFHRDHRV*FCGRCALFQGRVTG
Trigger: CCCTGTCACTCTACCCTGAAACAGAGCACACCTCCCACAAAACCACACTCTATGATCTCTGTGAAAATCTTCAGGAGCCCTGTCCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp GCTCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTaGTGGCAGAAGGGTTACCATGGCCTCCAAAGGTCACGAGAGAAC +
Preference number: 1 (lower is better)
Translates to: ARIQSTAIKIHTKPP*WQKGYHGLQRSREN
Trigger: GTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCTTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp TTGGATCTCACAGGGAGCCTAACAGTAGACGTCCACATCACTGCCTaGACAGGGCTCCTGAAGATTTTCACAGAGATCATAGAGTGTGGT +
Preference number: 1 (lower is better)
Translates to: LDLTGSLTVDVHITA*TGLLKIFTEIIECG
Trigger: ACCACACTCTATGATCTCTGTGAAAATCTTCAGGAGCCCTGTCCAGGCAGTGATGTGGACGTCTACTGTTAGGCTCCCTGTGAGATCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp AATCAAAATACACACAAAACCACCGTGGTGGCAGAAGGGTTACCATaGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCT +
Preference number: 1 (lower is better)
Translates to: NQNTHKTTVVAEGLP*PPKVTREQARSLMA
Trigger: AGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCTTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp CGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTaGCAGAAGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAG +
Preference number: 1 (lower is better)
Translates to: RIQSTAIKIHTKPPW*QKGYHGLQRSRENK
Trigger: CTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCTTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp AAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTaGGTTCTCCTTCATCATGTGGGATCGCCATTTGAGGACATGTTA +
Preference number: 1 (lower is better)
Translates to: KGKYLTTEACLRCAR*VLLHHVGSPFEDML
Trigger: TAACATGTCCTCAAATGGCGATCCCACATGATGAAGGAGAACCCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp CCGGGCACTGGTATAACAATGCACACTGTCATTAGGCCTCATTCATaGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATGGCAAG +
Preference number: 1 (lower is better)
Translates to: PGTGITMHTVIRPHS*IMGIELGCACLHGK
Trigger: CTTGCCATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAATGACAGTGTGCATTGTTATACCAGTGCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
3UTR GCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTaGTTGCATGGCAAGTACTCTTACTGCCTGAGCCATTTCCCTAGC +
Preference number: 1 (lower is better)
Translates to: IRPHSWIMGIELGCA*LHGKYSYCLSHFPS
Trigger: GCTAGGGAAATGGCTCAGGCAGTAAGAGTACTTGCCATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
3UTR TCA 90 bp ATAGAGTGTGGTTTTGTGGGAGGTGTGCTCTGTTTCAGGGTAGAGTaGCAGGGAAGTTTAAGGTATATCAAAACTAGGTTCCCAAGCCAG +
Preference number: 1 (lower is better)
Translates to: IECGFVGGVLCFRVE*QGSLRYIKTRFPSQ
Trigger: CTGGCTTGGGAACCTAGTTTTGATATACCTTAAACTTCCCTGTCACTCTACCCTGAAACAGAGCACACCTCCCACAAAACCACACTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 90 bp GGACATGTTACTATGGAGCAAGTCGCTCATTTCCATGAGCAACTTTaGAATGTATGGTACCCATATAGTATCCTAACACGTGACCTTGGG +
Preference number: 1 (lower is better)
Translates to: GHVTMEQVAHFHEQL*NVWYPYSILTRDLG
Trigger: CCCAAGGTCACGTGTTAGGATACTATATGGGTACCATACATTTCAAAGTTGCTCATGGAAATGAGCGACTTGCTCCATAGTAACATGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 90 bp GTTCTCCTTCATCATGTGGGATCGCCATTTGAGGACATGTTACTATaGAGCAAGTCGCTCATTTCCATGAGCAACTTTGAAATGTATGGT +
Preference number: 1 (lower is better)
Translates to: VLLHHVGSPFEDMLL*SKSLISMSNFEMYG
Trigger: ACCATACATTTCAAAGTTGCTCATGGAAATGAGCGACTTGCTCCATAGTAACATGTCCTCAAATGGCGATCCCACATGATGAAGGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 90 bp AGTGATTCGGAGATTCTAGAAGATCAGAGTGTGACATCCACAGAATaGGGCTCTTTGGACTGTCTATCACACTTAACTTTTAATGCATTC +
Preference number: 1 (lower is better)
Translates to: SDSEILEDQSVTSTE*GSLDCLSHLTFNAF
Trigger: GAATGCATTAAAAGTTAAGTGTGATAGACAGTCCAAAGAGCCTCATTCTGTGGATGTCACACTCTGATCTTCTAGAATCTCCGAATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 90 bp ACCGGCATTTGCAAACACACAGCCAACGTTGTAAGTAAAATATTCTaGAGTAGTGATCCGAACCTGAAATCCAAAAGGAAAGTATCTGAC +
Preference number: 1 (lower is better)
Translates to: TGICKHTANVVSKIF*SSDPNLKSKRKVSD
Trigger: GTCAGATACTTTCCTTTTGGATTTCAGGTTCGGATCACTACTTCAGAATATTTTACTTACAACGTTGGCTGTGTGTTTGCAAATGCCGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR TCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGGACGCAGAAGGTGCTaGGATGCCGCGGACACACGC +
Preference number: 2 (lower is better)
Translates to: MPELPLGMRETAVNLCRPGRRRC*DAADTR
Trigger: GCGTGTGTCCGCGGCATCTCAGCACCTTCTGCGTCC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR TCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGGCGCCCACAGCAGATaGCAGTGGCTTTCATTACAT +
Preference number: 2 (lower is better)
Translates to: MPELPLGMRETAVNLCRPGAHSR*QWLSLH
Trigger: ATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGAGGAATGGGGAGAGATaGAGCTGCGTCACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRRNGER*SCVTGH
Trigger: GTGGCCTGTGACGCAGCTGCATCTCTCCCCATTCCT...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR TCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGGACGCAGAAGGTGCTaGGATGCCGCGGACACACGC +
Preference number: 2 (lower is better)
Translates to: TMASKGHERTSQELNGFPGRRRC*DAADTR
Trigger: GCGTGTGTCCGCGGCATCTCAGCACCTTCTGCGTCC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR TCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGGGACGCAGAAGGTGCTaGGATGCCGCGGACACACGC +
Preference number: 2 (lower is better)
Translates to: GPLGLSADANKQLERTGVGRRRC*DAADTR
Trigger: GCGTGTGTCCGCGGCATCTCAGCACCTTCTGCGTCC...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATAACAGAGGGCTGCTCTaGACACTCCTAGTGCACCCA +
Preference number: 2 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHNRGLL*TLLVHP
Trigger: TGGGTGCACTAGGAGTGTGCAGAGCAGCCCTCTGTT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTAACAGAGGGCTGCTCTaGACACTCCTAGTGCACCCA +
Preference number: 2 (lower is better)
Translates to: LAASFLVGVSAAESTLVANRGLL*TLLVHP
Trigger: TGGGTGCACTAGGAGTGTGCAGAGCAGCCCTCTGTT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATGACGGGACTGGAGGGTaGAGCATGAGGTGTGCTAAA +
Preference number: 2 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHDGTGG*SMRCAK
Trigger: TTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTC...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGACGGGACTGGAGGGTaGAGCATGAGGTGTGCTAAA +
Preference number: 2 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPDGTGG*SMRCAK
Trigger: TTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTCCTCTTGCAGCCTATaGGATGAGATGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHSSCSL*DEMQPL
Trigger: GAGAGGCTGCATCTCATCCCATAGGCTGCAAGAGGA...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCCTGTGTGCAGAAGGTaGCATGGATGTCTCTGTCGT +
Preference number: 2 (lower is better)
Translates to: LAASFLVGVSAAESTLVAPVCRR*HGCLCR
Trigger: ACGACAGAGACATCCATGCCACCTTCTGCACACAGG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGAGCCGAGGGAGAAATaGTTCTCTCTTAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPEPREK*FSLRQV
Trigger: CACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTGCACCCAATCCTCTTaGAGCCTATGGGATGAGATG +
Preference number: 2 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHCTQSS*SLWDEM
Trigger: CATCTCATCCCATAGGCTGCAAGAGGATTGGGTGCA...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTAACAGAGGGCTGCTCTaGACACTCCTAGTGCACCCA +
Preference number: 2 (lower is better)
Translates to: TMASKGHERTSQELNGFPNRGLL*TLLVHP
Trigger: TGGGTGCACTAGGAGTGTGCAGAGCAGCCCTCTGTT...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGGGACACAGCCTGTGTaGAGAAGGTGGCATGGATGT +
Preference number: 2 (lower is better)
Translates to: TMASKGHERTSQELNGFPGTQPV*RRWHGC
Trigger: ACATCCATGCCACCTTCTGCACACAGGCTGTGTCCC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGAGGAATGGGGAGAGATaGAGCTGCGTCACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: NPKGKYLTTEACLRCARWRNGER*SCVTGH
Trigger: GTGGCCTGTGACGCAGCTGCATCTCTCCCCATTCCT...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATAGGAATGGGGAGAGATaGAGCTGCGTCACAGGCCAC +
Preference number: 2 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYRNGER*SCVTGH
Trigger: GTGGCCTGTGACGCAGCTGCATCTCTCCCCATTCCT...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTGCACCCAATCCTCTTaGAGCCTATGGGATGAGATG +
Preference number: 2 (lower is better)
Translates to: RVTMASKGHERTSQELNGCTQSS*SLWDEM
Trigger: CATCTCATCCCATAGGCTGCAAGAGGATTGGGTGCA...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGGGACACAGCCTGTGTaGAGAAGGTGGCATGGATGT +
Preference number: 2 (lower is better)
Translates to: NPKGKYLTTEACLRCARWGTQPV*RRWHGC
Trigger: ACATCCATGCCACCTTCTGCACACAGGCTGTGTCCC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGGGACACAGCCTGTGTaGAGAAGGTGGCATGGATGT +
Preference number: 2 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPGTQPV*RRWHGC
Trigger: ACATCCATGCCACCTTCTGCACACAGGCTGTGTCCC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGTCCTCTTGCAGCCTATaGGATGAGATGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: GPLGLSADANKQLERTGVSSCSL*DEMQPL
Trigger: GAGAGGCTGCATCTCATCCCATAGGCTGCAAGAGGA...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAAGAAAGATCTGTCTTTaGAGTAAAACACCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: MPELPLGMRETAVNLCRPRKICL*SKTPFK
Trigger: CTTAAAGGGTGTTTTACTCCAAAGACAGATCTTTCT...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CAA 90 bp CAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGCAGCTCTCATTaGGATCTCACAGGGAGCCTAACAGTAGACGTCCACATCACTGCC +
Preference number: 2 (lower is better)
Translates to: QMQISNLREPGCSSH*DLTGSLTVDVHITA
Trigger: GGCAGTGATGTGGACGTCTACTGTTAGGCTCCCTGTGAGATCCAAATGAGAGCTGCACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATGAGCCGAGGGAGAAATaGTTCTCTCTTAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYEPREK*FSLRQV
Trigger: CACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTC...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGAGCCGAGGGAGAAATaGTTCTCTCTTAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: NPKGKYLTTEACLRCARWEPREK*FSLRQV
Trigger: CACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGAGCCGAGGGAGAAATaGTTCTCTCTTAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPEPREK*FSLRQV
Trigger: CACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTCCTCTTGCAGCCTATaGGATGAGATGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSSCSL*DEMQPL
Trigger: GAGAGGCTGCATCTCATCCCATAGGCTGCAAGAGGA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTCCTCTTGCAGCCTATaGGATGAGATGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYSSCSL*DEMQPL
Trigger: GAGAGGCTGCATCTCATCCCATAGGCTGCAAGAGGA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGTCCTCTTGCAGCCTATaGGATGAGATGCAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: NPKGKYLTTEACLRCARWSSCSL*DEMQPL
Trigger: GAGAGGCTGCATCTCATCCCATAGGCTGCAAGAGGA...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGCCTGTGTGCAGAAGGTaGCATGGATGTCTCTGTCGT +
Preference number: 2 (lower is better)
Translates to: NPKGKYLTTEACLRCARWPVCRR*HGCLCR
Trigger: ACGACAGAGACATCCATGCCACCTTCTGCACACAGG...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGTGCACCCAATCCTCTTaGAGCCTATGGGATGAGATG +
Preference number: 2 (lower is better)
Translates to: NPKGKYLTTEACLRCARWCTQSS*SLWDEM
Trigger: CATCTCATCCCATAGGCTGCAAGAGGATTGGGTGCA...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGGTCATCACCCGTATTaGACATTAACTAATTGCTGG +
Preference number: 2 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPGHHPY*TLTNCW
Trigger: CCAGCAATTAGTTAATGTGCAATACGGGTGATGACC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp GGCACTGGTATAACAATGCACACTGTCATTAGGCCTCATTCATGGATAATGGGGGCTCAAGTCCTAACATaGCATCAGGGAGCCACCTGG +
Preference number: 2 (lower is better)
Translates to: GTGITMHTVIRPHSWIMGAQVLT*HQGATW
Trigger: CCAGGTGGCTCCCTGATGCCATGTTAGGACTTGAGC...CCCCATTATCCATGAATGAGGCCTAATGACAGTGTGCATTGTTATACCAGTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
3UTR-3UTR CCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGGCTGTATGTCTAAGATaGTGCATTGTAGACCAGCCT +
Preference number: 2 (lower is better)
Translates to: GPLGLSADANKQLERTGVAVCLR*CIVDQP
Trigger: AGGCTGGTCTACAATGCACCATCTTAGACATACAGC...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGGGTCATCACCCGTATTaGACATTAACTAATTGCTGG +
Preference number: 2 (lower is better)
Translates to: GPLGLSADANKQLERTGVGHHPY*TLTNCW
Trigger: CCAGCAATTAGTTAATGTGCAATACGGGTGATGACC...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR TCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATCCTGGACAGGGCTCCTaGAGATTTTCACAGAGATCA +
Preference number: 2 (lower is better)
Translates to: IRPHSWIMGIELGCACLHPGQGS*RFSQRS
Trigger: TGATCTCTGTGAAAATCTTCAGGAGCCCTGTCCAGG...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
3UTR-3UTR GCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATCATCGCACCGGCATTTaGAAACACACAGCCAACGTT +
Preference number: 2 (lower is better)
Translates to: IRPHSWIMGIELGCACLHHRTGI*KHTANV
Trigger: AACGTTGGCTGTGTGTTTGCAAATGCCGGTGCGATG...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
3UTR-3UTR CCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCAGAAAGATCTGTCTTTaGAGTAAAACACCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: RVTMASKGHERTSQELNGRKICL*SKTPFK
Trigger: CTTAAAGGGTGTTTTACTCCAAAGACAGATCTTTCT...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTGGGACACAGCCTGTGTaGAGAAGGTGGCATGGATGT +
Preference number: 2 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLGTQPV*RRWHGC
Trigger: ACATCCATGCCACCTTCTGCACACAGGCTGTGTCCC...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTGAGCCGAGGGAGAAATaGTTCTCTCTTAGGCAGGTG +
Preference number: 2 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLEPREK*FSLRQV
Trigger: CACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTC...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR GCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAAGGTCATCACCCGTATTaGACATTAACTAATTGCTGG +
Preference number: 2 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEGHHPY*TLTNCW
Trigger: CCAGCAATTAGTTAATGTGCAATACGGGTGATGACC...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGAGAAAGATCTGTCTTTaGAGTAAAACACCCTTTAAG +
Preference number: 2 (lower is better)
Translates to: NPKGKYLTTEACLRCARWRKICL*SKTPFK
Trigger: CTTAAAGGGTGTTTTACTCCAAAGACAGATCTTTCT...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGCAGAAGGGTTACCATaGCCTCCAAAGGTCACGAGA +
Preference number: 2 (lower is better)
Translates to: SSILFITEISSSASSTTQAEGLP*PPKVTR
Trigger: TCTCGTGACCTTTGGAGGCCATGGTAACCCTTCTGC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGAGAGATCATAGAGTGTaGTTTTGTGGGAGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: SSILFITEISSSASSTTQRDHRV*FCGRCA
Trigger: AGCACACCTCCCACAAAACCACACTCTATGATCTCT...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR GCA 72 bp CGAGCGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATaGTTCTCTCTTAGGCAGGTGGCCACATATCAGCCT +
Preference number: 3 (lower is better)
Translates to: RASERASEPREK*FSLRQVATYQP
Trigger: AGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp GCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTaGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTC +
Preference number: 3 (lower is better)
Translates to: ASRGRNASLLGR*PHISLPSSSRV
Trigger: GACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 72 bp TTTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTaGGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGC +
Preference number: 3 (lower is better)
Translates to: FSGILPGGRKCC*VHTSGSSLLGS
Trigger: GCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR GCA 72 bp GGGCACAGTGATACTGAGACAGGCTCTCAGGTGGCCTaGCCGCTGATAAGGGGTCATCACCCGTATTGCACA +
Preference number: 3 (lower is better)
Translates to: GHSDTETGSQVA*PLIRGHHPYCT
Trigger: TGTGCAATACGGGTGATGACCCCTTATCAGCGGGCAGGCCACCTGAGAGCCTGTCTCAGTATCACTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp GGGAGCCACACACTCAGGGCCGAGTTTCTCCATCAGTaGGCGCCCACAGCAGATGACAGTGGCTTTCATTAC +
Preference number: 3 (lower is better)
Translates to: GSHTLRAEFLHQ*APTADDSGFHY
Trigger: GTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCTGAGTGTGTGGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR GCA 72 bp AGTGCACCCAATCCTCTTGCAGCCTATGGGATGAGATaGAGCCTCTCTCCGCCCTCCATGCTTAGAAGTGTC +
Preference number: 3 (lower is better)
Translates to: SAPNPLAAYGMR*SLSPPSMLRSV
Trigger: GACACTTCTAAGCATGGAGGGCGGAGAGAGGCTGCATCTCATCCCATAGGCTGCAAGAGGATTGGGTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp ACACACAAAACCACCGTGGTGGCAGAAGGGTTACCATaGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGC +
Preference number: 3 (lower is better)
Translates to: THKTTVVAEGLP*PPKVTREQARS
Trigger: GCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCTTCTGCCACCACGGTGGTTTTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp AGGGGTCATCACCCGTATTGCACATTAACTAATTGCTaGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTG +
Preference number: 3 (lower is better)
Translates to: RGHHPYCTLTNC*SRRDWRVQHEV
Trigger: CACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp TCACTTAGACTCGGGACACAGCCTGTGTGCAGAAGGTaGCATGGATGTCTCTGTCGTGGAAATGTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: SLRLGTQPVCRR*HGCLCRGNVSL
Trigger: CAGGGACACATTTCCACGACAGAGACATCCATGCCACCTTCTGCACACAGGCTGTGTCCCGAGTCTAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp TATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTaGGTTCTCCTTCATCATGTGGGATCGCCATTTGAG +
Preference number: 3 (lower is better)
Translates to: YLTTEACLRCAR*VLLHHVGSPFE
Trigger: CTCAAATGGCGATCCCACATGATGAAGGAGAACCCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CAA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGGGCTGCAGAGGGCATTaGAAAAGAGATGCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: GPLGLSADANKQLERTGVGCRGH*KRDARA
Trigger: AGCTCTGGCATCTCTTTTCAAATGCCCTCTGCAGCC...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGGCTGCAGAGGGCATTaGAAAAGAGATGCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: NPKGKYLTTEACLRCARWGCRGH*KRDARA
Trigger: AGCTCTGGCATCTCTTTTCAAATGCCCTCTGCAGCC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 72 bp GGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATaGCAGTGGCTTTCATTACATTCCTGTGAACTATGT +
Preference number: 3 (lower is better)
Translates to: GRVSPSVGAHSR*QWLSLHSCELC
Trigger: ACATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR GCA 72 bp ATAAGGGGTCATCACCCGTATTGCACATTAACTAATTaGTGGAGCAGACGGGACTGGAGGGTGCAGCATGAG +
Preference number: 3 (lower is better)
Translates to: IRGHHPYCTLTN*WSRRDWRVQHE
Trigger: CTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATGACCCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CAA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGATAAATAGCCCAGCCTaGAGCTATGAGGAATGGGGA +
Preference number: 3 (lower is better)
Translates to: GPLGLSADANKQLERTGVINSPA*SYEEWG
Trigger: TCCCCATTCCTCATAGCTCAAGGCTGGGCTATTTAT...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR GCA 72 bp GTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTaGAGCTCTCATTTGGATCTCACAGGGAGCCTAACA +
Preference number: 3 (lower is better)
Translates to: VQMQISNLREPG*SSHLDLTGSLT
Trigger: TGTTAGGCTCCCTGTGAGATCCAAATGAGAGCTGCACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp TCCACAGCAATCAAAATACACACAAAACCACCGTGGTaGCAGAAGGGTTACCATGGCCTCCAAAGGTCACGA +
Preference number: 3 (lower is better)
Translates to: STAIKIHTKPPW*QKGYHGLQRSR
Trigger: TCGTGACCTTTGGAGGCCATGGTAACCCTTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp CAGTCCACAGCAATCAAAATACACACAAAACCACCGTaGTGGCAGAAGGGTTACCATGGCCTCCAAAGGTCA +
Preference number: 3 (lower is better)
Translates to: QSTAIKIHTKPP*WQKGYHGLQRS
Trigger: TGACCTTTGGAGGCCATGGTAACCCTTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp ACAGGGAGCCTAACAGTAGACGTCCACATCACTGCCTaGACAGGGCTCCTGAAGATTTTCACAGAGATCATA +
Preference number: 3 (lower is better)
Translates to: TGSLTVDVHITA*TGLLKIFTEII
Trigger: TATGATCTCTGTGAAAATCTTCAGGAGCCCTGTCCAGGCAGTGATGTGGACGTCTACTGTTAGGCTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CAA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATATAAATAGCCCAGCCTaGAGCTATGAGGAATGGGGA +
Preference number: 3 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYINSPA*SYEEWG
Trigger: TCCCCATTCCTCATAGCTCAAGGCTGGGCTATTTAT...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp AGGGCTCCTGAAGATTTTCACAGAGATCATAGAGTGTaGTTTTGTGGGAGGTGTGCTCTGTTTCAGGGTAGA +
Preference number: 3 (lower is better)
Translates to: RAPEDFHRDHRV*FCGRCALFQGR
Trigger: TCTACCCTGAAACAGAGCACACCTCCCACAAAACCACACTCTATGATCTCTGTGAAAATCTTCAGGAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 72 bp GGTTTTGTGGGAGGTGTGCTCTGTTTCAGGGTAGAGTaGCAGGGAAGTTTAAGGTATATCAAAACTAGGTTC +
Preference number: 3 (lower is better)
Translates to: GFVGGVLCFRVE*QGSLRYIKTRF
Trigger: GAACCTAGTTTTGATATACCTTAAACTTCCCTGTCACTCTACCCTGAAACAGAGCACACCTCCCACAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CCA 72 bp GGTATAACAATGCACACTGTCATTAGGCCTCATTCATaGATAATGGGGATAGAACTTGGATGTGCTTGCTTG +
Preference number: 3 (lower is better)
Translates to: GITMHTVIRPHS*IMGIELGCACL
Trigger: CAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAATGACAGTGTGCATTGTTATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
3UTR-3UTR CAA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGATGCAAATAAGCAACTaGAGAGAACCGGGGTGCAGC +
Preference number: 3 (lower is better)
Translates to: SSILFITEISSSASSTTQMQISN*REPGCS
Trigger: GCTGCACCCCGGTTCTCTCAAGTTGCTTATTTGCAT...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR-3UTR CAA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGATAAATAGCCCAGCCTaGAGCTATGAGGAATGGGGA +
Preference number: 3 (lower is better)
Translates to: SSILFITEISSSASSTTQINSPA*SYEEWG
Trigger: TCCCCATTCCTCATAGCTCAAGGCTGGGCTATTTAT...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 72 bp GAGATTCTAGAAGATCAGAGTGTGACATCCACAGAATaGGGCTCTTTGGACTGTCTATCACACTTAACTTTT +
Preference number: 3 (lower is better)
Translates to: EILEDQSVTSTE*GSLDCLSHLTF
Trigger: AAAAGTTAAGTGTGATAGACAGTCCAAAGAGCCTCATTCTGTGGATGTCACACTCTGATCTTCTAGAATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 72 bp ACTATGGAGCAAGTCGCTCATTTCCATGAGCAACTTTaGAATGTATGGTACCCATATAGTATCCTAACACGT +
Preference number: 3 (lower is better)
Translates to: TMEQVAHFHEQL*NVWYPYSILTR
Trigger: ACGTGTTAGGATACTATATGGGTACCATACATTTCAAAGTTGCTCATGGAAATGAGCGACTTGCTCCATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR TCA 72 bp TGCAAACACACAGCCAACGTTGTAAGTAAAATATTCTaGAGTAGTGATCCGAACCTGAAATCCAAAAGGAAA +
Preference number: 3 (lower is better)
Translates to: CKHTANVVSKIF*SSDPNLKSKRK
Trigger: TTTCCTTTTGGATTTCAGGTTCGGATCACTACTTCAGAATATTTTACTTACAACGTTGGCTGTGTGTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCATGGATGGGGTGTCGCTaGGAGGCAGGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPWMGCR*EAGPGQ
Trigger: CTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCA...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCACAGAAGCGGGCCCTGTaGAAGCACCGTGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPQKRAL*KHRAPL
Trigger: GAGAGGGGCACGGTGCTTCCACAGGGCCCGCTTCTG...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGTGGGCCTTACTCTGGTaGATGAGCAGTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWWALLW*MSSPRA
Trigger: GGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCA...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGTCTGGGCCTTACTCTaGTGGATGAGCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPVWALL*WMSSPR
Trigger: CCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGAC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGTGGCCAGGCCAAGCTaGGCAGGCTGCTCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRVARPS*AGCSPV
Trigger: TACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCAC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTCTCGCAGCTCCTTCTaGCAGGATGGGGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRSRSSF*QDGGRG
Trigger: GCCACGTCCCCCATCCTGTCAGAAGGAGCTGCGAGA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGTCTCTCTGTGGTCACTaGGGCCACCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWSLCGH*GHRRGR
Trigger: TCTCCCTCTGCGGTGGCCTCAGTGACCACAGAGAGA...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGTCTTGGCATGCTCCTaGACCAGCTCACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWVLACS*TSSPLG
Trigger: CCCCAAGGGTGAGCTGGTGCAGGAGCATGCCAAGAC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCATTGCCGAAGCGGACGTaGAAAGGGGAGCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPLPKRT*KGEHCR
Trigger: TCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAA...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCTGGATGGGGTGTCGCTaGGAGGCAGGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPWMGCR*EAGPGQ
Trigger: CTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCA...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTGGATGGGGTGTCGCTaGGAGGCAGGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAWMGCR*EAGPGQ
Trigger: CTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAAGCAATGGGAAGACGTaGTCGACCACTTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPSNGKT*STTSQS
Trigger: GCTCTGCGAAGTGGTCGATCACGTCTTCCCATTGCT...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGGAGGACACCCATCTTaGCGAAGCGGACGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWGGHPS*RSGRGK
Trigger: CTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGGCTTGGCGGCTGCGTaGTCTTCATCACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWGLAAA*SSSLED
Trigger: ATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACCGTCACAAACACCTaGCCGGCCAGCTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFTVTNT*PASCPT
Trigger: CGTGGGGCAGCTGGCCGGCCAGGTGTTTGTGACGGT...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCACCGTCACAAACACCTaGCCGGCCAGCTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPTVTNT*PASCPT
Trigger: CGTGGGGCAGCTGGCCGGCCAGGTGTTTGTGACGGT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTACCGTCACAAACACCTaGCCGGCCAGCTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVATVTNT*PASCPT
Trigger: CGTGGGGCAGCTGGCCGGCCAGGTGTTTGTGACGGT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCTCCTTCTGACAGGATaGGGGACGTGGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWLLLTG*GTWPGT
Trigger: TGTACCTGGCCACGTCCCCCATCCTGTCAGAAGGAG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCCAGGCTGCTGGGGCTaGGGGACCATTCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAPGCWG*GTILCP
Trigger: CGGACAGAGAATGGTCCCCCAGCCCCAGCAGCCTGG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTCCAGGCTGCTGGGGCTaGGGGACCATTCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFPGCWG*GTILCP
Trigger: CGGACAGAGAATGGTCCCCCAGCCCCAGCAGCCTGG...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWTDCGD*LADLAP
Trigger: CGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGT...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGGAGATGGCGATGGATaGCAGGTCCCTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRGDGDG*QVPQAV
Trigger: GACAGCCTGAGGGACCTGCCATCCATCGCCATCTCC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCCAGAAGCGGGCCCTGTaGAAGCACCGTGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPQKRAL*KHRAPL
Trigger: GAGAGGGGCACGGTGCTTCCACAGGGCCCGCTTCTG...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTCAGAAGCGGGCCCTGTaGAAGCACCGTGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFQKRAL*KHRAPL
Trigger: GAGAGGGGCACGGTGCTTCCACAGGGCCCGCTTCTG...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTCTCGCAGCTCCTTCTaGCAGGATGGGGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVASRSSF*QDGGRG
Trigger: GCCACGTCCCCCATCCTGTCAGAAGGAGCTGCGAGA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTGGAAAGGGGAGCACTaGAGACTGCCATTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRWKGEH*RLPLGC
Trigger: GCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCACCGTCACAAACACCTaGCCGGCCAGCTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSTVTNT*PASCPT
Trigger: CGTGGGGCAGCTGGCCGGCCAGGTGTTTGTGACGGT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTTGCCGAAGCGGACGTaGAAAGGGGAGCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRLPKRT*KGEHCR
Trigger: TCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTGGATGGGGTGTCGCTaGGAGGCAGGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RVTMASKGHERTSQELNGWMGCR*EAGPGQ
Trigger: CTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCA...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGGACTTTGCAGCCTGTaGCAATTCACCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWGLCSL*QFTPQP
Trigger: TGGCTGTGGGGTGAATTGCCACAGGCTGCAAAGTCC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTGGGCCTTACTCTGGTaGATGAGCAGTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHWALLW*MSSPRA
Trigger: GGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCA...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATCACCGCAGAGGGAGATaGCGATGGATGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHHRRGR*RWMAGP
Trigger: GGGACCTGCCATCCATCGCCATCTCCCTCTGCGGTG...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCACCGCAGAGGGAGATaGCGATGGATGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAHRRGR*RWMAGP
Trigger: GGGACCTGCCATCCATCGCCATCTCCCTCTGCGGTG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGTTGGTGATCTCTCTGTaGTCACTGAGGCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWLVISL*SLRPPQ
Trigger: CTGCGGTGGCCTCAGTGACCACAGAGAGATCACCAA...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGTGGCCAGGCCAAGCTaGGCAGGCTGCTCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPVARPS*AGCSPV
Trigger: TACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCAC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGCAGCGACAGGTGCCCTaGTACTGGGTAGTGACACTG +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRQRQVP*YWVVTL
Trigger: CAGTGTCACTACCCAGTACCAGGGCACCTGTCGCTG...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCAGAAGCGGGCCCTGTaGAAGCACCGTGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSQKRAL*KHRAPL
Trigger: GAGAGGGGCACGGTGCTTCCACAGGGCCCGCTTCTG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACAGAAGCGGGCCCTGTaGAAGCACCGTGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLQKRAL*KHRAPL
Trigger: GAGAGGGGCACGGTGCTTCCACAGGGCCCGCTTCTG...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTCTCGCAGCTCCTTCTaGCAGGATGGGGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSSRSSF*QDGGRG
Trigger: GCCACGTCCCCCATCCTGTCAGAAGGAGCTGCGAGA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTTCTCTCTGTGGTCACTaGGGCCACCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFSLCGH*GHRRGR
Trigger: TCTCCCTCTGCGGTGGCCTCAGTGACCACAGAGAGA...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCACCTTGGGGTTCACAGTaGAGATCCTATTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPPWGSQ*RSYSGT
Trigger: TGTCCCTGAATAGGATCTTCACTGTGAACCCCAAGG...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGAGCAATGGGAAGACGTaGTCGACCACTTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRSNGKT*STTSQS
Trigger: GCTCTGCGAAGTGGTCGATCACGTCTTCCCATTGCT...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGGCAATCTACCAGGCTaGTGGGGCTGGGGGACCATT +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPGNLPG*WGWGTI
Trigger: AATGGTCCCCCAGCCCCAGCAGCCTGGTAGATTGCC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGGGGAAATACAGGGCTaGCACTTCAGGGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRGEIQG*HFRVHV
Trigger: GACATGGACCCTGAAGTGGCAGCCCTGTATTTCCCC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGGTACAGCTTTGCAATaGCCTGGTGAGTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPGTALQ*PGESNP
Trigger: AGGATTGGACTCACCAGGGCATTGCAAAGCTGTACC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGTCTTGGCATGCTCCTaGACCAGCTCACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAVLACS*TSSPLG
Trigger: CCCCAAGGGTGAGCTGGTGCAGGAGCATGCCAAGAC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGTGGATGGGGTGTCGCTaGGAGGCAGGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVWMGCR*EAGPGQ
Trigger: CTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCA...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGGCTCCCTAAGGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWGSLRG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCCTTAGGGAGCC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTGTCTGGGCCTTACTCTaGTGGATGAGCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFVWALL*WMSSPR
Trigger: CCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGAC...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGGAGATGGCGATGGATaGCAGGTCCCTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPGDGDG*QVPQAV
Trigger: GACAGCCTGAGGGACCTGCCATCCATCGCCATCTCC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTTGGTGATCTCTCTGTaGTCACTGAGGCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRLVISL*SLRPPQ
Trigger: CTGCGGTGGCCTCAGTGACCACAGAGAGATCACCAA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCAGGTACATGGGGATaGTTTCCTGATCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWPGTWG*FPDRCQ
Trigger: CTGACAACGATCAGGAAATCATCCCCATGTACCTGG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTTTGCAATGCCCTGGTaGGTCCAATCCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRFAMPW*VQSFPS
Trigger: GCTGGGAAAGGATTGGACTCACCAGGGCATTGCAAA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTGGAAAGGGGAGCACTaGAGACTGCCATTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAWKGEH*RLPLGC
Trigger: GCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCGGCAATCTACCAGGCTaGTGGGGCTGGGGGACCATT +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSGNLPG*WGWGTI
Trigger: AATGGTCCCCCAGCCCCAGCAGCCTGGTAGATTGCC...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGGCAATCTACCAGGCTaGTGGGGCTGGGGGACCATT +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPGNLPG*WGWGTI
Trigger: AATGGTCCCCCAGCCCCAGCAGCCTGGTAGATTGCC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATGGCTTGGCGGCTGCGTaGTCTTCATCACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHGLAAA*SSSLED
Trigger: ATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCC...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGGTACAGCTTTGCAATaGCCTGGTGAGTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWGTALQ*PGESNP
Trigger: AGGATTGGACTCACCAGGGCATTGCAAAGCTGTACC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGTCTTGGCATGCTCCTaGACCAGCTCACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPVLACS*TSSPLG
Trigger: CCCCAAGGGTGAGCTGGTGCAGGAGCATGCCAAGAC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCTTGCCGAAGCGGACGTaGAAAGGGGAGCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPLPKRT*KGEHCR
Trigger: TCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAA...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATCTCCTTCTGACAGGATaGGGGACGTGGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHLLLTG*GTWPGT
Trigger: TGTACCTGGCCACGTCCCCCATCCTGTCAGAAGGAG...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCCTCCTTCTGACAGGATaGGGGACGTGGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPLLLTG*GTWPGT
Trigger: TGTACCTGGCCACGTCCCCCATCCTGTCAGAAGGAG...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCCAGGCTGCTGGGGCTaGGGGACCATTCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVPGCWG*GTILCP
Trigger: CGGACAGAGAATGGTCCCCCAGCCCCAGCAGCCTGG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTCCAGGCTGCTGGGGCTaGGGGACCATTCTCTGTCCG +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPPGCWG*GTILCP
Trigger: CGGACAGAGAATGGTCCCCCAGCCCCAGCAGCCTGG...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATAATCTACCAGGCTGCTaGGGCTGGGGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHNLPGC*GWGTIL
Trigger: GAGAATGGTCCCCCAGCCCCAGCAGCCTGGTAGATT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFTDCGD*LADLAP
Trigger: CGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGT...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPTDCGD*LADLAP
Trigger: CGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGGAGATGGCGATGGATaGCAGGTCCCTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLGDGDG*QVPQAV
Trigger: GACAGCCTGAGGGACCTGCCATCCATCGCCATCTCC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAAGAGGGAGATGGCGATaGATGGCAGGTCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLRGRWR*MAGPSG
Trigger: GCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCT...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCAGAGGGAGATGGCGATaGATGGCAGGTCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPRGRWR*MAGPSG
Trigger: GCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCT...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCAGAGGGAGATGGCGATaGATGGCAGGTCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSRGRWR*MAGPSG
Trigger: GCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCATGCTTTATCCTGGTaGCCAGGCCAAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAHALSW*PGQAGQ
Trigger: CTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTCAGCGACAGGTGCCCTaGTACTGGGTAGTGACACTG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFQRQVP*YWVVTL
Trigger: CAGTGTCACTACCCAGTACCAGGGCACCTGTCGCTG...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTGTCCGCCATCCCAATaGCACGTGCCGAACAATAGA +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRCPPSQ*HVPNNR
Trigger: TCTATTGTTCGGCACGTGCCATTGGGATGGCGGACA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGGGAAGTCACAGGAATaGCTTCTCTTTAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPGKSQE*LLFSNG
Trigger: CCCATTGCTAAAGAGAAGCCATTCCTGTGACTTCCC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGTCTCGCAGCTCCTTCTaGCAGGATGGGGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVSRSSF*QDGGRG
Trigger: GCCACGTCCCCCATCCTGTCAGAAGGAGCTGCGAGA...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGCAATGGGAAGACGTaGTCGACCACTTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFSNGKT*STTSQS
Trigger: GCTCTGCGAAGTGGTCGATCACGTCTTCCCATTGCT...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTAGCAATGGGAAGACGTaGTCGACCACTTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVASNGKT*STTSQS
Trigger: GCTCTGCGAAGTGGTCGATCACGTCTTCCCATTGCT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGGAGGACACCCATCTTaGCGAAGCGGACGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLGGHPS*RSGRGK
Trigger: CTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGGAGGACACCCATCTTaGCGAAGCGGACGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPGGHPS*RSGRGK
Trigger: CTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCCTTGCTCGACGACTGTaGGGTGTTGGGATATGGGGC +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPLARRL*GVGIWG
Trigger: GCCCCATATCCCAACACCGCACAGTCGTCGAGCAAG...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCTTGCTCGACGACTGTaGGGTGTTGGGATATGGGGC +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSLARRL*GVGIWG
Trigger: GCCCCATATCCCAACACCGCACAGTCGTCGAGCAAG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTCAATCACTTCTCTGTaGAAGGCGGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRSITSL*KAEKRL
Trigger: CAGCCTCTTCTCCGCCTTGCACAGAGAAGTGATTGA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCATGTTGGTCTTGGCATaGTCCTGCACCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPMLVLA*SCTSSP
Trigger: GGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACAT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTATGTTGGTCTTGGCATaGTCCTGCACCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAMLVLA*SCTSSP
Trigger: GGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACAT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGACCGTCACAAACACCTaGCCGGCCAGCTGCCCCACG +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWTVTNT*PASCPT
Trigger: CGTGGGGCAGCTGGCCGGCCAGGTGTTTGTGACGGT...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTTGCCGAAGCGGACGTaGAAAGGGGAGCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSLPKRT*KGEHCR
Trigger: TCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCAATCTACCAGGCTGCTaGGGCTGGGGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSNLPGC*GWGTIL
Trigger: GAGAATGGTCCCCCAGCCCCAGCAGCCTGGTAGATT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGGACTTTGCAGCCTGTaGCAATTCACCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPGLCSL*QFTPQP
Trigger: TGGCTGTGGGGTGAATTGCCACAGGCTGCAAAGTCC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGAACTGCATTTCCGTCTaGGCCTTACTCTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRNCISV*ALLWWM
Trigger: CATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTT...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTACTGTGGTGACTGGTTaGCTGACCTGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVATVVTG*LTWLRC
Trigger: ACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCACTGTGGTGACTGGTTaGCTGACCTGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPTVVTG*LTWLRC
Trigger: ACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATACTGTGGTGACTGGTTaGCTGACCTGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHTVVTG*LTWLRC
Trigger: ACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSTDCGD*LADLAP
Trigger: CGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCACCGCAGAGGGAGATaGCGATGGATGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVHRRGR*RWMAGP
Trigger: GGGACCTGCCATCCATCGCCATCTCCCTCTGCGGTG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTTTGGTGATCTCTCTGTaGTCACTGAGGCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFLVISL*SLRPPQ
Trigger: CTGCGGTGGCCTCAGTGACCACAGAGAGATCACCAA...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGTGGCCAGGCCAAGCTaGGCAGGCTGCTCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWVARPS*AGCSPV
Trigger: TACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCAC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGTGGCCAGGCCAAGCTaGGCAGGCTGCTCTCCGGTA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPVARPS*AGCSPV
Trigger: TACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCAC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACATGCTTTATCCTGGTaGCCAGGCCAAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLHALSW*PGQAGQ
Trigger: CTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATG...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCCATGCTTTATCCTGGTaGCCAGGCCAAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPHALSW*PGQAGQ
Trigger: CTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATG...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACAGCGACAGGTGCCCTaGTACTGGGTAGTGACACTG +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLQRQVP*YWVVTL
Trigger: CAGTGTCACTACCCAGTACCAGGGCACCTGTCGCTG...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCAGCGACAGGTGCCCTaGTACTGGGTAGTGACACTG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSQRQVP*YWVVTL
Trigger: CAGTGTCACTACCCAGTACCAGGGCACCTGTCGCTG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGAATCCTTTCCCAGCGTaGGCAAAATGTGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWNPFPA*AKCDQE
Trigger: CTCTTGGTCACATTTTGCCCACGCTGGGAAAGGATT...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTCTCGCAGCTCCTTCTaGCAGGATGGGGGACGTGGC +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYSRSSF*QDGGRG
Trigger: GCCACGTCCCCCATCCTGTCAGAAGGAGCTGCGAGA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGCTTGCTTTCCTCTTTaGTTGTGGCATTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWACFPL*LWHFFL
Trigger: GAGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTTTGCAATGCCCTGGTaGGTCCAATCCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHFAMPW*VQSFPS
Trigger: GCTGGGAAAGGATTGGACTCACCAGGGCATTGCAAA...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCAGCAATGGGAAGACGTaGTCGACCACTTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSSNGKT*STTSQS
Trigger: GCTCTGCGAAGTGGTCGATCACGTCTTCCCATTGCT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCTGAACGTTAATGTTTaGAGGCCACACACTTCGGAT +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWLNVNV*RPHTSD
Trigger: ATCCGAAGTGTGTGGCCTTCAAACATTAACGTTCAG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238839.2
CDS-3UTR GCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTGGAAAGGGGAGCACTaGAGACTGCCATTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVTMASKGHERTSQELNGWKGEH*RLPLGC
Trigger: GCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCA...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTGGCGTCAACCTGTCTaGAGACTTACTGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHWRQPV*RLTDQL
Trigger: GAGCTGGTCAGTAAGTCTGCAGACAGGTTGACGCCA...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTTGGCGTCAACCTGTCTaGAGACTTACTGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFWRQPV*RLTDQL
Trigger: GAGCTGGTCAGTAAGTCTGCAGACAGGTTGACGCCA...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGGGGAAATACAGGGCTaGCACTTCAGGGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPGEIQG*HFRVHV
Trigger: GACATGGACCCTGAAGTGGCAGCCCTGTATTTCCCC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGGGGAAATACAGGGCTaGCACTTCAGGGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLGEIQG*HFRVHV
Trigger: GACATGGACCCTGAAGTGGCAGCCCTGTATTTCCCC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAATGTTGGTCTTGGCATaGTCCTGCACCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLMLVLA*SCTSSP
Trigger: GGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACAT...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGGACTTTGCAGCCTGTaGCAATTCACCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPGLCSL*QFTPQP
Trigger: TGGCTGTGGGGTGAATTGCCACAGGCTGCAAAGTCC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTGGCTCCCTAAGGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFGSLRG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCCTTAGGGAGCC...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGTGGGCCTTACTCTGGTaGATGAGCAGTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWWALLW*MSSPRA
Trigger: GGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCA...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTGGGCCTTACTCTGGTaGATGAGCAGTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPWALLW*MSSPRA
Trigger: GGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGTCTGGGCCTTACTCTaGTGGATGAGCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPVWALL*WMSSPR
Trigger: CCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGAC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGAGAGGGAGATGGCGATaGATGGCAGGTCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVRGRWR*MAGPSG
Trigger: GCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCT...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGAGAGGGAGATGGCGATaGATGGCAGGTCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVRGRWR*MAGPSG
Trigger: GCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCT...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTTTGGCAAAGGTTTCTaGAAAGCCTGCATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRFGKGF*KACIAR
Trigger: TCTGGCGATGCAGGCTTTCCAGAAACCTTTGCCAAA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTGTCCGCCATCCCAATaGCACGTGCCGAACAATAGA +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVACPPSQ*HVPNNR
Trigger: TCTATTGTTCGGCACGTGCCATTGGGATGGCGGACA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGCTGAATGCATGTCCTaGTTTTCAAAAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWAECMS*FSKGGS
Trigger: ACTGCCACCTTTTGAAAACCAGGACATGCATTCAGC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCCCAGGTACATGGGGATaGTTTCCTGATCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPPGTWG*FPDRCQ
Trigger: CTGACAACGATCAGGAAATCATCCCCATGTACCTGG...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGTCACTAAAAGTATCTaGAGACTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRVTKSI*RLAVNG
Trigger: GCCATTCACAGCGAGTCTTCAGATACTTTTAGTGAC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTCTCTCTGTGGTCACTaGGGCCACCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSLCGH*GHRRGR
Trigger: TCTCCCTCTGCGGTGGCCTCAGTGACCACAGAGAGA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTTTGCAATGCCCTGGTaGGTCCAATCCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPFAMPW*VQSFPS
Trigger: GCTGGGAAAGGATTGGACTCACCAGGGCATTGCAAA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCCTTGGGGTTCACAGTaGAGATCCTATTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAPWGSQ*RSYSGT
Trigger: TGTCCCTGAATAGGATCTTCACTGTGAACCCCAAGG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTCCTTGGGGTTCACAGTaGAGATCCTATTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFPWGSQ*RSYSGT
Trigger: TGTCCCTGAATAGGATCTTCACTGTGAACCCCAAGG...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAAGACTGCCATTGGGCTaGCGGATGACAATGATGTCG +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLRLPLG*RMTMMS
Trigger: CGACATCATTGTCATCCGGCAGCCCAATGGCAGTCT...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGTGGAAAGGGGAGCACTaGAGACTGCCATTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVWKGEH*RLPLGC
Trigger: GCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCA...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGGAGGACACCCATCTTaGCGAAGCGGACGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPGGHPS*RSGRGK
Trigger: CTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTCTCCCAACTTCATGTaGAAATCCACGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVASPNFM*KSTDSP
Trigger: TGGGGAGTCCGTGGATTTGCACATGAAGTTGGGAGA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGCTTGCTCGACGACTGTaGGGTGTTGGGATATGGGGC +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVLARRL*GVGIWG
Trigger: GCCCCATATCCCAACACCGCACAGTCGTCGAGCAAG...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTCTTGCTCGACGACTGTaGGGTGTTGGGATATGGGGC +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPLARRL*GVGIWG
Trigger: GCCCCATATCCCAACACCGCACAGTCGTCGAGCAAG...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGGCTTGTTCCAAAAATaGATCTTTGGTGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: MPELPLGMRETAVNLCRPGLFQK*IFGDLS
Trigger: AGAGAGATCACCAAAGATGCATTTTTGGAACAAGCC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGGGCTTGGCGGCTGCGTaGTCTTCATCACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVGLAAA*SSSLED
Trigger: ATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCC...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTCAATCACTTCTCTGTaGAAGGCGGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVASITSL*KAEKRL
Trigger: CAGCCTCTTCTCCGCCTTGCACAGAGAAGTGATTGA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGTCTTGGCATGCTCCTaGACCAGCTCACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWVLACS*TSSPLG
Trigger: CCCCAAGGGTGAGCTGGTGCAGGAGCATGCCAAGAC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGCTCCTTCTGACAGGATaGGGGACGTGGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVLLLTG*GTWPGT
Trigger: TGTACCTGGCCACGTCCCCCATCCTGTCAGAAGGAG...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCTCCTTCTGACAGGATaGGGGACGTGGCCAGGTACA +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVLLLTG*GTWPGT
Trigger: TGTACCTGGCCACGTCCCCCATCCTGTCAGAAGGAG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGAATCTACCAGGCTGCTaGGGCTGGGGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVNLPGC*GWGTIL
Trigger: GAGAATGGTCCCCCAGCCCCAGCAGCCTGGTAGATT...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTCCGAAGCATGGAAGTaGCAAGACTGCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVASEAWK*QDCRGQ
Trigger: TTGTCCTCTGCAGTCTTGCCACTTCCATGCTTCGGA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTTCCAGGTTATTCTTTaGCGTCAACCTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRFQVIL*RQPVCR
Trigger: TCTGCAGACAGGTTGACGCCAAAGAATAACCTGGAA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCGGCTCCCTAAGGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSGSLRG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCCTTAGGGAGCC...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGTCTGGGCCTTACTCTaGTGGATGAGCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPVWALL*WMSSPR
Trigger: CCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGAC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTAACTGCATTTCCGTCTaGGCCTTACTCTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVANCISV*ALLWWM
Trigger: CATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCAACTGCATTTCCGTCTaGGCCTTACTCTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPNCISV*ALLWWM
Trigger: CATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACAGGATCCCCATTCTTaGGGAAATACAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLQDPHS*GNTGLP
Trigger: TGGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTG...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCAGGATCCCCATTCTTaGGGAAATACAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSQDPHS*GNTGLP
Trigger: TGGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPTDCGD*LADLAP
Trigger: CGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGT...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGGAGATGGCGATGGATaGCAGGTCCCTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWGDGDG*QVPQAV
Trigger: GACAGCCTGAGGGACCTGCCATCCATCGCCATCTCC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGGAGATGGCGATGGATaGCAGGTCCCTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPGDGDG*QVPQAV
Trigger: GACAGCCTGAGGGACCTGCCATCCATCGCCATCTCC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGCGTGCTCTTCATCACTaGAGGATGACTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRRALHH*RMTHAL
Trigger: TAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACG...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTGTCCGCCATCCCAATaGCACGTGCCGAACAATAGA +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPCPPSQ*HVPNNR
Trigger: TCTATTGTTCGGCACGTGCCATTGGGATGGCGGACA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTGTCCGCCATCCCAATaGCACGTGCCGAACAATAGA +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSCPPSQ*HVPNNR
Trigger: TCTATTGTTCGGCACGTGCCATTGGGATGGCGGACA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGCTGAATGCATGTCCTaGTTTTCAAAAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRAECMS*FSKGGS
Trigger: ACTGCCACCTTTTGAAAACCAGGACATGCATTCAGC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGAGACACGAAGACTTTaGCAAAGGTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRETRRL*QRFLES
Trigger: GCTTTCCAGAAACCTTTGCCAAAGTCTTCGTGTCTC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCCAGGTACATGGGGATaGTTTCCTGATCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSPGTWG*FPDRCQ
Trigger: CTGACAACGATCAGGAAATCATCCCCATGTACCTGG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGCATCTTATCTCTCATaGTGGATTCCACAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAASYLS*WIPQWP
Trigger: AGGCCACTGTGGAATCCATCATGAGAGATAAGATGC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR TCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACCTTGGGGTTCACAGTaGAGATCCTATTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLPWGSQ*RSYSGT
Trigger: TGTCCCTGAATAGGATCTTCACTGTGAACCCCAAGG...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGCATCTTATCTCTCATaGTGGATTCCACAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAASYLS*WIPQWL
Trigger: CAGCCACTGTGGAATCCATCATGAGAGATAAGATGC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTGGAAAGGGGAGCACTaGAGACTGCCATTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYWKGEH*RLPLGC
Trigger: GCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGGAGGACACCCATCTTaGCGAAGCGGACGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWGGHPS*RSGRGK
Trigger: CTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATCTCCCAACTTCATGTaGAAATCCACGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLSPNFM*KSTDSP
Trigger: TGGGGAGTCCGTGGATTTGCACATGAAGTTGGGAGA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTGGAAGTGGCAAGACTaGAGAGGACAAGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSWKWQD*RGQELE
Trigger: CTCTAGCTCTTGTCCTCTGCAGTCTTGCCACTTCCA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATGGAAGTGGCAAGACTaGAGAGGACAAGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLWKWQD*RGQELE
Trigger: CTCTAGCTCTTGTCCTCTGCAGTCTTGCCACTTCCA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCCTTGCTCGACGACTGTaGGGTGTTGGGATATGGGGC +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPLARRL*GVGIWG
Trigger: GCCCCATATCCCAACACCGCACAGTCGTCGAGCAAG...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATCTTGCTCGACGACTGTaGGGTGTTGGGATATGGGGC +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYLARRL*GVGIWG
Trigger: GCCCCATATCCCAACACCGCACAGTCGTCGAGCAAG...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGGGGAAATACAGGGCTaGCACTTCAGGGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPGEIQG*HFRVHV
Trigger: GACATGGACCCTGAAGTGGCAGCCCTGTATTTCCCC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGGCTTGGCGGCTGCGTaGTCTTCATCACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWGLAAA*SSSLED
Trigger: ATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGGCTTGGCGGCTGCGTaGTCTTCATCACTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPGLAAA*SSSLED
Trigger: ATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGGTACAGCTTTGCAATaGCCTGGTGAGTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPGTALQ*PGESNP
Trigger: AGGATTGGACTCACCAGGGCATTGCAAAGCTGTACC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTCAATCACTTCTCTGTaGAAGGCGGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSSITSL*KAEKRL
Trigger: CAGCCTCTTCTCCGCCTTGCACAGAGAAGTGATTGA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGATGTTGGTCTTGGCATaGTCCTGCACCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVMLVLA*SCTSSP
Trigger: GGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACAT...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTTGCCGAAGCGGACGTaGAAAGGGGAGCACTGCAGA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPLPKRT*KGEHCR
Trigger: TCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGTTTATCTTTCTTCCTaGAAGGGGAATCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRVYLSS*KGNLSC
Trigger: GCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAAC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCCAGGATCCCCATTCTTaGGGAAATACAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RVTMASKGHERTSQELNGQDPHS*GNTGLP
Trigger: TGGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTG...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGTTGGTGATCTCTCTGTaGTCACTGAGGCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVLVISL*SLRPPQ
Trigger: CTGCGGTGGCCTCAGTGACCACAGAGAGATCACCAA...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFFHSGL*QRFLES
Trigger: GCTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCCAGCGACAGGTGCCCTaGTACTGGGTAGTGACACTG +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPQRQVP*YWVVTL
Trigger: CAGTGTCACTACCCAGTACCAGGGCACCTGTCGCTG...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATAATCCTTTCCCAGCGTaGGCAAAATGTGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHNPFPA*AKCDQE
Trigger: CTCTTGGTCACATTTTGCCCACGCTGGGAAAGGATT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTGGGAAGTCACAGGAATaGCTTCTCTTTAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFGKSQE*LLFSNG
Trigger: CCCATTGCTAAAGAGAAGCCATTCCTGTGACTTCCC...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCCCAGGTACATGGGGATaGTTTCCTGATCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: RVTMASKGHERTSQELNGPGTWG*FPDRCQ
Trigger: CTGACAACGATCAGGAAATCATCCCCATGTACCTGG...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTCATTGTCATCTCTTTTaGGATTGTCCAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFHCHLF*DCPTGP
Trigger: AGGCCCAGTTGGACAATCTCAAAAGAGATGACAATG...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCATTGTCATCTCTTTTaGGATTGTCCAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAHCHLF*DCPTGP
Trigger: AGGCCCAGTTGGACAATCTCAAAAGAGATGACAATG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGTCACTAAAAGTATCTaGAGACTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAVTKSI*RLAVNG
Trigger: GCCATTCACAGCGAGTCTTCAGATACTTTTAGTGAC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGCTTGCTTTCCTCTTTaGTTGTGGCATTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVAACFPL*LWHFFL
Trigger: GAGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCTTCATCACTGGAGGATaGCTCATGCTTTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPFITGG*LMLYPG
Trigger: ACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAA...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTTCATCACTGGAGGATaGCTCATGCTTTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHFITGG*LMLYPG
Trigger: ACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAA...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGCGTGGGCAAAATGTaGCCAAGAGTATCAGATCTT +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFSVGKM*PRVSDL
Trigger: AAGATCTGATACTCTTGGTCACATTTTGCCCACGCT...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGTTTGCAATGCCCTGGTaGGTCCAATCCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVFAMPW*VQSFPS
Trigger: GCTGGGAAAGGATTGGACTCACCAGGGCATTGCAAA...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTAGACTGCCATTGGGCTaGCGGATGACAATGATGTCG +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPRLPLG*RMTMMS
Trigger: CGACATCATTGTCATCCGGCAGCCCAATGGCAGTCT...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGAGACTGCCATTGGGCTaGCGGATGACAATGATGTCG +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVRLPLG*RMTMMS
Trigger: CGACATCATTGTCATCCGGCAGCCCAATGGCAGTCT...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGGGGAAATACAGGGCTaGCACTTCAGGGTCCATGTC +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWGEIQG*HFRVHV
Trigger: GACATGGACCCTGAAGTGGCAGCCCTGTATTTCCCC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCGGTACAGCTTTGCAATaGCCTGGTGAGTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: RVTMASKGHERTSQELNGGTALQ*PGESNP
Trigger: AGGATTGGACTCACCAGGGCATTGCAAAGCTGTACC...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTTTCCAGGTTATTCTTTaGCGTCAACCTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFFQVIL*RQPVCR
Trigger: TCTGCAGACAGGTTGACGCCAAAGAATAACCTGGAA...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGGGCTCCCTAAGGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVGSLRG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCCTTAGGGAGCC...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGGATCCCCATTCTTaGGGAAATACAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVQDPHS*GNTGLP
Trigger: TGGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCACTGTGGTGACTGGTTaGCTGACCTGGCTCCGTTGT +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPTVVTG*LTWLRC
Trigger: ACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGT...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAACACCGCAGAGGGAGATaGCGATGGATGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEHRRGR*RWMAGP
Trigger: GGGACCTGCCATCCATCGCCATCTCCCTCTGCGGTG...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTTTGGCAAAGGTTTCTaGAAAGCCTGCATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSFGKGF*KACIAR
Trigger: TCTGGCGATGCAGGCTTTCCAGAAACCTTTGCCAAA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLFHSGL*QRFLES
Trigger: GCTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTCGTGCTCTTCATCACTaGAGGATGACTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFRALHH*RMTHAL
Trigger: TAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACG...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCAATCCTTTCCCAGCGTaGGCAAAATGTGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPNPFPA*AKCDQE
Trigger: CTCTTGGTCACATTTTGCCCACGCTGGGAAAGGATT...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAAATCCTTTCCCAGCGTaGGCAAAATGTGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLNPFPA*AKCDQE
Trigger: CTCTTGGTCACATTTTGCCCACGCTGGGAAAGGATT...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGTGTCCGCCATCCCAATaGCACGTGCCGAACAATAGA +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVCPPSQ*HVPNNR
Trigger: TCTATTGTTCGGCACGTGCCATTGGGATGGCGGACA...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGATGTCTGTCAAACACTaGACTTTGAACTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRMSVKH*TLNFSG
Trigger: GCCAGAAAAGTTCAAAGTCCAGTGTTTGACAGACAT...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCGGGAAGTCACAGGAATaGCTTCTCTTTAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSGKSQE*LLFSNG
Trigger: CCCATTGCTAAAGAGAAGCCATTCCTGTGACTTCCC...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFLVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVALVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPLVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGCTGAATGCATGTCCTaGTTTTCAAAAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPAECMS*FSKGGS
Trigger: ACTGCCACCTTTTGAAAACCAGGACATGCATTCAGC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTGCTGAATGCATGTCCTaGTTTTCAAAAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFAECMS*FSKGGS
Trigger: ACTGCCACCTTTTGAAAACCAGGACATGCATTCAGC...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCCAGGTACATGGGGATaGTTTCCTGATCGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVPGTWG*FPDRCQ
Trigger: CTGACAACGATCAGGAAATCATCCCCATGTACCTGG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCATTGTCATCTCTTTTaGGATTGTCCAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSHCHLF*DCPTGP
Trigger: AGGCCCAGTTGGACAATCTCAAAAGAGATGACAATG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATCTCTCTGTGGTCACTaGGGCCACCGCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAESLCGH*GHRRGR
Trigger: TCTCCCTCTGCGGTGGCCTCAGTGACCACAGAGAGA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCGCATCTTATCTCTCATaGTGGATTCCACAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RVTMASKGHERTSQELNGASYLS*WIPQWP
Trigger: AGGCCACTGTGGAATCCATCATGAGAGATAAGATGC...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
CDS-3UTR TCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATTCATCACTGGAGGATaGCTCATGCTTTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLFITGG*LMLYPG
Trigger: ACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTTCATCACTGGAGGATaGCTCATGCTTTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPFITGG*LMLYPG
Trigger: ACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTGGAAAAACAGGTTCTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFGKTGS*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAGAACCTGTTTTTCC...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATGGAAAAACAGGTTCTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHGKTGS*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAGAACCTGTTTTTCC...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTCCCGTGGAGGTAACTaGGACACGAAGACTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSRGGN*DTKTLA
Trigger: TGCCAAAGTCTTCGTGTCTCAGTTACCTCCACGGGA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGACTGCCATTGGGCTaGCGGATGACAATGATGTCG +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPRLPLG*RMTMMS
Trigger: CGACATCATTGTCATCCGGCAGCCCAATGGCAGTCT...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGTGGAAGTGGCAAGACTaGAGAGGACAAGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVWKWQD*RGQELE
Trigger: CTCTAGCTCTTGTCCTCTGCAGTCTTGCCACTTCCA...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTTGGAAGTGGCAAGACTaGAGAGGACAAGAGCTAGAG +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPWKWQD*RGQELE
Trigger: CTCTAGCTCTTGTCCTCTGCAGTCTTGCCACTTCCA...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTGGCGTCAACCTGTCTaGAGACTTACTGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPWRQPV*RLTDQL
Trigger: GAGCTGGTCAGTAAGTCTGCAGACAGGTTGACGCCA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTTCAATCACTTCTCTGTaGAAGGCGGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPSITSL*KAEKRL
Trigger: CAGCCTCTTCTCCGCCTTGCACAGAGAAGTGATTGA...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGAATATCATCTTGGAATaGTGGTACATCATTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWNIILE*WYIIRK
Trigger: CTTCCTAATGATGTACCACCATTCCAAGATGATATT...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATTCCAGGTTATTCTTTaGCGTCAACCTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLFQVIL*RQPVCR
Trigger: TCTGCAGACAGGTTGACGCCAAAGAATAACCTGGAA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTTCCAGGTTATTCTTTaGCGTCAACCTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPFQVIL*RQPVCR
Trigger: TCTGCAGACAGGTTGACGCCAAAGAATAACCTGGAA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGAAGACTCGCTGTGAATaGCCTGAAAATTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWKTRCE*PENSFY
Trigger: ATAAAATGAATTTTCAGGCCATTCACAGCGAGTCTT...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAAGTCTGGGCCTTACTCTaGTGGATGAGCAGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEVWALL*WMSSPR
Trigger: CCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGAC...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGCACTGGTATAACAATGCACACTGTCATTAGGCCTCATTCATGGATAATGGGGCATGCTTTATCCTGGTaGCCAGGCCAAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: GTGITMHTVIRPHSWIMGHALSW*PGQAGQ
Trigger: CTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATG...CCCCATTATCCATGAATGAGGCCTAATGACAGTGTGCATTGTTATACCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCGTGCTCTTCATCACTaGAGGATGACTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSRALHH*RMTHAL
Trigger: TAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGACTTTGAACTTTTCTaGCTTCTTTTCAATCACTTC +
Preference number: 4 (lower is better)
Translates to: RASERASRGRNASLLGRWDFELF*LLFNHF
Trigger: GAAGTGATTGAAAAGAAGCCAGAAAAGTTCAAAGTC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLLVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CAA 72 bp ATAAGCAACTTGAGAGAACCGGGGTGCAGCTCTCATTaGGATCTCACAGGGAGCCTAACAGTAGACGTCCAC +
Preference number: 4 (lower is better)
Translates to: ISNLREPGCSSH*DLTGSLTVDVH
Trigger: GTGGACGTCTACTGTTAGGCTCCCTGTGAGATCCAAATGAGAGCTGCACCCCGGTTCTCTCAAGTTGCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCGTCACTAAAAGTATCTaGAGACTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: RVTMASKGHERTSQELNGVTKSI*RLAVNG
Trigger: GCCATTCACAGCGAGTCTTCAGATACTTTTAGTGAC...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGGCATCTTATCTCTCATaGTGGATTCCACAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVASYLS*WIPQWP
Trigger: AGGCCACTGTGGAATCCATCATGAGAGATAAGATGC...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR TCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGGAAAAACAGGTTCTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLGKTGS*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAGAACCTGTTTTTCC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTCTCCCAACTTCATGTaGAAATCCACGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSPNFM*KSTDSP
Trigger: TGGGGAGTCCGTGGATTTGCACATGAAGTTGGGAGA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGGCTTGTTCCAAAAATaGATCTTTGGTGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPGLFQK*IFGDLS
Trigger: AGAGAGATCACCAAAGATGCATTTTTGGAACAAGCC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGGTACAGCTTTGCAATaGCCTGGTGAGTCCAATCCT +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPGTALQ*PGESNP
Trigger: AGGATTGGACTCACCAGGGCATTGCAAAGCTGTACC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTCAATCACTTCTCTGTaGAAGGCGGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSITSL*KAEKRL
Trigger: CAGCCTCTTCTCCGCCTTGCACAGAGAAGTGATTGA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTGGATGGGGTGTCGCTaGGAGGCAGGCCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLWMGCR*EAGPGQ
Trigger: CTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTCCGAAGCATGGAAGTaGCAAGACTGCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYSEAWK*QDCRGQ
Trigger: TTGTCCTCTGCAGTCTTGCCACTTCCATGCTTCGGA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTCCGAAGCATGGAAGTaGCAAGACTGCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSEAWK*QDCRGQ
Trigger: TTGTCCTCTGCAGTCTTGCCACTTCCATGCTTCGGA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGAAGACTCGCTGTGAATaGCCTGAAAATTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRKTRCE*PENSFY
Trigger: ATAAAATGAATTTTCAGGCCATTCACAGCGAGTCTT...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGTTTATCTTTCTTCCTaGAAGGGGAATCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLVYLSS*KGNLSC
Trigger: GCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAAC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATGTCTGTCAAACACTaGACTTTGAACTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFMSVKH*TLNFSG
Trigger: GCCAGAAAAGTTCAAAGTCCAGTGTTTGACAGACAT...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCATGTCTGTCAAACACTaGACTTTGAACTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPMSVKH*TLNFSG
Trigger: GCCAGAAAAGTTCAAAGTCCAGTGTTTGACAGACAT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCACAGTGGCTGTGGGTaGACTGAAAATTTTAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSHSGCG*TENFRK
Trigger: CTTTCTAAAATTTTCAGTCCACCCACAGCCACTGTG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATGCATCTTATCTCTCATaGTGGATTCCACAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYASYLS*WIPQWP
Trigger: AGGCCACTGTGGAATCCATCATGAGAGATAAGATGC...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
CDS-3UTR TCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTTTCATCACTGGAGGATaGCTCATGCTTTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPFITGG*LMLYPG
Trigger: ACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAA...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTAGCGTGGGCAAAATGTaGCCAAGAGTATCAGATCTT +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPSVGKM*PRVSDL
Trigger: AAGATCTGATACTCTTGGTCACATTTTGCCCACGCT...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGAGCGTGGGCAAAATGTaGCCAAGAGTATCAGATCTT +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVSVGKM*PRVSDL
Trigger: AAGATCTGATACTCTTGGTCACATTTTGCCCACGCT...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTCAAACACTGGACTTTaGACTTTTCTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVASNTGL*TFLASF
Trigger: AAAAGAAGCCAGAAAAGTTCAAAGTCCAGTGTTTGA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCTCAAACACTGGACTTTaGACTTTTCTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPSNTGL*TFLASF
Trigger: AAAAGAAGCCAGAAAAGTTCAAAGTCCAGTGTTTGA...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCGGCTTGTTCCAAAAATaGATCTTTGGTGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSGLFQK*IFGDLS
Trigger: AGAGAGATCACCAAAGATGCATTTTTGGAACAAGCC...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGGCTTGTTCCAAAAATaGATCTTTGGTGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLGLFQK*IFGDLS
Trigger: AGAGAGATCACCAAAGATGCATTTTTGGAACAAGCC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATATCATCTTGGAATGGTaGTACATCATTAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHIILEW*YIIRKS
Trigger: ACTCTTCCTAATGATGTACCACCATTCCAAGATGAT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGTTCCAGGTTATTCTTTaGCGTCAACCTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVFQVIL*RQPVCR
Trigger: TCTGCAGACAGGTTGACGCCAAAGAATAACCTGGAA...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGCACTGGTATAACAATGCACACTGTCATTAGGCCTCATTCATGGATAATGGGGCAGGATCCCCATTCTTaGGGAAATACAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GTGITMHTVIRPHSWIMGQDPHS*GNTGLP
Trigger: TGGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTG...CCCCATTATCCATGAATGAGGCCTAATGACAGTGTGCATTGTTATACCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR CCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTTTGGCAAAGGTTTCTaGAAAGCCTGCATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYFGKGF*KACIAR
Trigger: TCTGGCGATGCAGGCTTTCCAGAAACCTTTGCCAAA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTTTGGCAAAGGTTTCTaGAAAGCCTGCATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPFGKGF*KACIAR
Trigger: TCTGGCGATGCAGGCTTTCCAGAAACCTTTGCCAAA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCGTGCTCTTCATCACTaGAGGATGACTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVRALHH*RMTHAL
Trigger: TAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAATGTCTGTCAAACACTaGACTTTGAACTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLMSVKH*TLNFSG
Trigger: GCCAGAAAAGTTCAAAGTCCAGTGTTTGACAGACAT...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCATGTCTGTCAAACACTaGACTTTGAACTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSMSVKH*TLNFSG
Trigger: GCCAGAAAAGTTCAAAGTCCAGTGTTTGACAGACAT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGGGAAGTCACAGGAATaGCTTCTCTTTAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPGKSQE*LLFSNG
Trigger: CCCATTGCTAAAGAGAAGCCATTCCTGTGACTTCCC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCCATTGTCATCTCTTTTaGGATTGTCCAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPHCHLF*DCPTGP
Trigger: AGGCCCAGTTGGACAATCTCAAAAGAGATGACAATG...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATCATTGTCATCTCTTTTaGGATTGTCCAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYHCHLF*DCPTGP
Trigger: AGGCCCAGTTGGACAATCTCAAAAGAGATGACAATG...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGTCACTAAAAGTATCTaGAGACTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWVTKSI*RLAVNG
Trigger: GCCATTCACAGCGAGTCTTCAGATACTTTTAGTGAC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGTCACTAAAAGTATCTaGAGACTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPVTKSI*RLAVNG
Trigger: GCCATTCACAGCGAGTCTTCAGATACTTTTAGTGAC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGCTTGCTTTCCTCTTTaGTTGTGGCATTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPACFPL*LWHFFL
Trigger: GAGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGCTTGCTTTCCTCTTTaGTTGTGGCATTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWACFPL*LWHFFL
Trigger: GAGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGTGGGCAAAATGTaGCCAAGAGTATCAGATCTT +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSVGKM*PRVSDL
Trigger: AAGATCTGATACTCTTGGTCACATTTTGCCCACGCT...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATAGCGTGGGCAAAATGTaGCCAAGAGTATCAGATCTT +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYSVGKM*PRVSDL
Trigger: AAGATCTGATACTCTTGGTCACATTTTGCCCACGCT...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCTCAAACACTGGACTTTaGACTTTTCTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSSNTGL*TFLASF
Trigger: AAAAGAAGCCAGAAAAGTTCAAAGTCCAGTGTTTGA...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATAGCAATGGGAAGACGTaGTCGACCACTTCGCAGAGC +
Preference number: 4 (lower is better)
Translates to: IRPHSWIMGIELGCACLHSNGKT*STTSQS
Trigger: GCTCTGCGAAGTGGTCGATCACGTCTTCCCATTGCT...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR GCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATGGCGTCAACCTGTCTaGAGACTTACTGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEWRQPV*RLTDQL
Trigger: GAGCTGGTCAGTAAGTCTGCAGACAGGTTGACGCCA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAATCATCTTGGAATGGTaGTACATCATTAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLIILEW*YIIRKS
Trigger: ACTCTTCCTAATGATGTACCACCATTCCAAGATGAT...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATAATATCATCTTGGAATaGTGGTACATCATTAGGAAG +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHNIILE*WYIIRK
Trigger: CTTCCTAATGATGTACCACCATTCCAAGATGATATT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCAATATCATCTTGGAATaGTGGTACATCATTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPNIILE*WYIIRK
Trigger: CTTCCTAATGATGTACCACCATTCCAAGATGATATT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAAGACTCGCTGTGAATaGCCTGAAAATTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFKTRCE*PENSFY
Trigger: ATAAAATGAATTTTCAGGCCATTCACAGCGAGTCTT...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGTGGGCCTTACTCTGGTaGATGAGCAGTCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQWALLW*MSSPRA
Trigger: GGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCA...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAACAGGATCCCCATTCTTaGGGAAATACAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEQDPHS*GNTGLP
Trigger: TGGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTG...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTCACCGCAGAGGGAGATaGCGATGGATGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLHRRGR*RWMAGP
Trigger: GGGACCTGCCATCCATCGCCATCTCCCTCTGCGGTG...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATGACTTTGAACTTTTCTaGCTTCTTTTCAATCACTTC +
Preference number: 4 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHDFELF*LLFNHF
Trigger: GAAGTGATTGAAAAGAAGCCAGAAAAGTTCAAAGTC...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGACTTTGAACTTTTCTaGCTTCTTTTCAATCACTTC +
Preference number: 4 (lower is better)
Translates to: LAASFLVGVSAAESTLVADFELF*LLFNHF
Trigger: GAAGTGATTGAAAAGAAGCCAGAAAAGTTCAAAGTC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATCTGGTTTTCAAAAGGTaGCAGTGGCTCTCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYLVFKR*QWLSPK
Trigger: TTTTGGAGAGAGCCACTGCCACCTTTTGAAAACCAG...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGCTGAATGCATGTCCTaGTTTTCAAAAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPAECMS*FSKGGS
Trigger: ACTGCCACCTTTTGAAAACCAGGACATGCATTCAGC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGGAAAAACAGGTTCTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPGKTGS*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAGAACCTGTTTTTCC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAACCTTGGGGTTCACAGTaGAGATCCTATTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEPWGSQ*RSYSGT
Trigger: TGTCCCTGAATAGGATCTTCACTGTGAACCCCAAGG...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATCTCCCAACTTCATGTaGAAATCCACGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAESPNFM*KSTDSP
Trigger: TGGGGAGTCCGTGGATTTGCACATGAAGTTGGGAGA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGGGCTTGTTCCAAAAATaGATCTTTGGTGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVGLFQK*IFGDLS
Trigger: AGAGAGATCACCAAAGATGCATTTTTGGAACAAGCC...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGGGCTTGTTCCAAAAATaGATCTTTGGTGATCTCTCT +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVGLFQK*IFGDLS
Trigger: AGAGAGATCACCAAAGATGCATTTTTGGAACAAGCC...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGTCTTGGCATGCTCCTaGACCAGCTCACCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQVLACS*TSSPLG
Trigger: CCCCAAGGGTGAGCTGGTGCAGGAGCATGCCAAGAC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCAATATCATCTTGGAATaGTGGTACATCATTAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRNASLLGRWPHISLPSSNIILE*WYIIRK
Trigger: CTTCCTAATGATGTACCACCATTCCAAGATGATATT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCAATATCATCTTGGAATaGTGGTACATCATTAGGAAG +
Preference number: 4 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPNIILE*WYIIRK
Trigger: CTTCCTAATGATGTACCACCATTCCAAGATGATATT...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGTTTATCTTTCTTCCTaGAAGGGGAATCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPVYLSS*KGNLSC
Trigger: GCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAAC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTGGAGATGGCGATGGATaGCAGGTCCCTCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLGDGDG*QVPQAV
Trigger: GACAGCCTGAGGGACCTGCCATCCATCGCCATCTCC...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGAGAGGGAGATGGCGATaGATGGCAGGTCCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQRGRWR*MAGPSG
Trigger: GCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCT...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGATGTCTGTCAAACACTaGACTTTGAACTTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVMSVKH*TLNFSG
Trigger: GCCAGAAAAGTTCAAAGTCCAGTGTTTGACAGACAT...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGTCAAACACTGGACTTTaGACTTTTCTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GPLGLSADANKQLERTGVSNTGL*TFLASF
Trigger: AAAAGAAGCCAGAAAAGTTCAAAGTCCAGTGTTTGA...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATTCTCCCAACTTCATGTaGAAATCCACGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: IRPHSWIMGIELGCACLHSPNFM*KSTDSP
Trigger: TGGGGAGTCCGTGGATTTGCACATGAAGTTGGGAGA...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGATCATCTTGGAATGGTaGTACATCATTAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVIILEW*YIIRKS
Trigger: ACTCTTCCTAATGATGTACCACCATTCCAAGATGAT...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGAATCTACCAGGCTGCTaGGGCTGGGGGACCATTCTC +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQNLPGC*GWGTIL
Trigger: GAGAATGGTCCCCCAGCCCCAGCAGCCTGGTAGATT...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLTDCGD*LADLAP
Trigger: CGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEFHSGL*QRFLES
Trigger: GCTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTCATGCTTTATCCTGGTaGCCAGGCCAAGCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLHALSW*PGQAGQ
Trigger: CTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATG...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGCAGCGACAGGTGCCCTaGTACTGGGTAGTGACACTG +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQQRQVP*YWVVTL
Trigger: CAGTGTCACTACCCAGTACCAGGGCACCTGTCGCTG...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
3UTR CAA 72 bp TCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTaGCATGGCAAGTACTCTTACTGCCTGAGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SWIMGIELGCAC*HGKYSYCLSHF
Trigger: GAAATGGCTCAGGCAGTAAGAGTACTTGCCATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
3UTR CAA 72 bp TCATTCATGGATAATGGGGATAGAACTTGGATGTGCTaGCTTGCATGGCAAGTACTCTTACTGCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: SFMDNGDRTWMC*LAWQVLLLPEP
Trigger: TGGCTCAGGCAGTAAGAGTACTTGCCATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR TCA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTCAAACACTGGACTTTaGACTTTTCTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYSNTGL*TFLASF
Trigger: AAAAGAAGCCAGAAAAGTTCAAAGTCCAGTGTTTGA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTATGTTGGTCTTGGCATaGTCCTGCACCAGCTCACCC +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLMLVLA*SCTSSP
Trigger: GGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACAT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGATCATCTTGGAATGGTaGTACATCATTAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWIILEW*YIIRKS
Trigger: ACTCTTCCTAATGATGTACCACCATTCCAAGATGAT...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATTCCAGGTTATTCTTTaGCGTCAACCTGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEFQVIL*RQPVCR
Trigger: TCTGCAGACAGGTTGACGCCAAAGAATAACCTGGAA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTGGACTTTGCAGCCTGTaGCAATTCACCCCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLGLCSL*QFTPQP
Trigger: TGGCTGTGGGGTGAATTGCCACAGGCTGCAAAGTCC...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGAAGACTCGCTGTGAATaGCCTGAAAATTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVKTRCE*PENSFY
Trigger: ATAAAATGAATTTTCAGGCCATTCACAGCGAGTCTT...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTTGGTGATCTCTCTGTaGTCACTGAGGCCACCGCAG +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLLVISL*SLRPPQ
Trigger: CTGCGGTGGCCTCAGTGACCACAGAGAGATCACCAA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAACGTGCTCTTCATCACTaGAGGATGACTCATGCTTTA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAERALHH*RMTHAL
Trigger: TAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACG...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGACTTTGAACTTTTCTaGCTTCTTTTCAATCACTTC +
Preference number: 4 (lower is better)
Translates to: TMASKGHERTSQELNGFPDFELF*LLFNHF
Trigger: GAAGTGATTGAAAAGAAGCCAGAAAAGTTCAAAGTC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGGACTTTGAACTTTTCTaGCTTCTTTTCAATCACTTC +
Preference number: 4 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVDFELF*LLFNHF
Trigger: GAAGTGATTGAAAAGAAGCCAGAAAAGTTCAAAGTC...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATTCAAAAGGTGGCAGTaGCTCTCTCCAAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEFKRWQ*LSPKGE
Trigger: TTCACCTTTTGGAGAGAGCCACTGCCACCTTTTGAA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATGCTTGCTTTCCTCTTTaGTTGTGGCATTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IRPHSWIMGIELGCACLHACFPL*LWHFFL
Trigger: GAGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGC...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR TCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGTTTGCAATGCCCTGGTaGGTCCAATCCTTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQFAMPW*VQSFPS
Trigger: GCTGGGAAAGGATTGGACTCACCAGGGCATTGCAAA...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAAGGAAAAACAGGTTCTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEGKTGS*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAGAACCTGTTTTTCC...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGAGACTGCCATTGGGCTaGCGGATGACAATGATGTCG +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQRLPLG*RMTMMS
Trigger: CGACATCATTGTCATCCGGCAGCCCAATGGCAGTCT...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTGGCGTCAACCTGTCTaGAGACTTACTGACCAGCTC +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLWRQPV*RLTDQL
Trigger: GAGCTGGTCAGTAAGTCTGCAGACAGGTTGACGCCA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGGCTCCCTAAGGGGCTaGACTCTTTCATCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQGSLRG*TLSSCV
Trigger: CACACAAGATGAAAGAGTCCAGCCCCTTAGGGAGCC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGAAGACTCGCTGTGAATaGCCTGAAAATTCATTTTAT +
Preference number: 4 (lower is better)
Translates to: NPKGKYLTTEACLRCARWKTRCE*PENSFY
Trigger: ATAAAATGAATTTTCAGGCCATTCACAGCGAGTCTT...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTCCTTGGGGTTCACAGTaGAGATCCTATTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLPWGSQ*RSYSGT
Trigger: TGTCCCTGAATAGGATCTTCACTGTGAACCCCAAGG...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTCTCCCAACTTCATGTaGAAATCCACGGACTCCCCA +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLSPNFM*KSTDSP
Trigger: TGGGGAGTCCGTGGATTTGCACATGAAGTTGGGAGA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR GCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGTCAATCACTTCTCTGTaGAAGGCGGAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQSITSL*KAEKRL
Trigger: CAGCCTCTTCTCCGCCTTGCACAGAGAAGTGATTGA...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTCCGAAGCATGGAAGTaGCAAGACTGCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLSEAWK*QDCRGQ
Trigger: TTGTCCTCTGCAGTCTTGCCACTTCCATGCTTCGGA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTAACTGCATTTCCGTCTaGGCCTTACTCTGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLNCISV*ALLWWM
Trigger: CATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATGTTTATCTTTCTTCCTaGAAGGGGAATCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: IRPHSWIMGIELGCACLHVYLSS*KGNLSC
Trigger: GCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAAC...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGTTTGGCAAAGGTTTCTaGAAAGCCTGCATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQFGKGF*KACIAR
Trigger: TCTGGCGATGCAGGCTTTCCAGAAACCTTTGCCAAA...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTTTGGCAAAGGTTTCTaGAAAGCCTGCATCGCCAGA +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLFGKGF*KACIAR
Trigger: TCTGGCGATGCAGGCTTTCCAGAAACCTTTGCCAAA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTTCCACAGTGGCCTTTaGCAAAGGTTTCTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLFHSGL*QRFLES
Trigger: GCTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTAATCCTTTCCCAGCGTaGGCAAAATGTGACCAAGAG +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLNPFPA*AKCDQE
Trigger: CTCTTGGTCACATTTTGCCCACGCTGGGAAAGGATT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGGGAAGTCACAGGAATaGCTTCTCTTTAGCAATGGG +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQGKSQE*LLFSNG
Trigger: CCCATTGCTAAAGAGAAGCCATTCCTGTGACTTCCC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGCATTGTCATCTCTTTTaGGATTGTCCAACTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQHCHLF*DCPTGP
Trigger: AGGCCCAGTTGGACAATCTCAAAAGAGATGACAATG...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGTCACTAAAAGTATCTaGAGACTCGCTGTGAATGGC +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQVTKSI*RLAVNG
Trigger: GCCATTCACAGCGAGTCTTCAGATACTTTTAGTGAC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTGCTTGCTTTCCTCTTTaGTTGTGGCATTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLACFPL*LWHFFL
Trigger: GAGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGC...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTTCATCACTGGAGGATaGCTCATGCTTTATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLFITGG*LMLYPG
Trigger: ACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTAGCGTGGGCAAAATGTaGCCAAGAGTATCAGATCTT +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLSVGKM*PRVSDL
Trigger: AAGATCTGATACTCTTGGTCACATTTTGCCCACGCT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATATCATCTTGGAATGGTaGTACATCATTAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: IRPHSWIMGIELGCACLHIILEW*YIIRKS
Trigger: ACTCTTCCTAATGATGTACCACCATTCCAAGATGAT...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR CCA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAAGACTTTGAACTTTTCTaGCTTCTTTTCAATCACTTC +
Preference number: 4 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEDFELF*LLFNHF
Trigger: GAAGTGATTGAAAAGAAGCCAGAAAAGTTCAAAGTC...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR TCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGGAAAAACAGGTTCTTaGTGTCTGTCAAACACTGGA +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQGKTGS*CLSNTG
Trigger: TCCAGTGTTTGACAGACATCAAGAACCTGTTTTTCC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGTTTATCTTTCTTCCTaGAAGGGGAATCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SSILFITEISSSASSTTQVYLSS*KGNLSC
Trigger: GCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAAC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CCA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTAATATCATCTTGGAATaGTGGTACATCATTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLNIILE*WYIIRK
Trigger: CTTCCTAATGATGTACCACCATTCCAAGATGATATT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 90 bp GCAGGTCCCTCAGGCTGTCGGAGGTGCTCTCCACACCACTGTCGATaGCCGAGCCTCCCACAGACTGTGGTGACTGGTTGGCTGACCTGG +
Preference number: 5 (lower is better)
Translates to: AGPSGCRRCSPHHCR*PSLPQTVVTGWLTW
Trigger: CCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCTCGGGCATCGACAGTGGTGTGGAGAGCACCTCCGACAGCCTGAGGGACCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 90 bp CCGAAGCGGACGTGGAAAGGGGAGCACTGCAGACTGCCATTGGGCTaGCGGATGACAATGATGTCGATGCATCCCGACAGCGTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: PKRTWKGEHCRLPLG*RMTMMSMHPDSVAG
Trigger: CCCCGCCACGCTGTCGGGATGCATCGACATCATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 90 bp AGAGGGAGATGGCGATGGATGGCAGGTCCCTCAGGCTGTCGGAGGTaGTCTCCACACCACTGTCGATGCCCGAGCCTCCCACAGACTGTG +
Preference number: 5 (lower is better)
Translates to: RGRWRWMAGPSGCRR*SPHHCRCPSLPQTV
Trigger: CACAGTCTGTGGGAGGCTCGGGCATCGACAGTGGTGTGGAGAGCACCTCCGACAGCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp CCTCGGCCAGGTGAGGGGGAGTCCTCTGGCAATCTACCAGGCTGCTaGGGCTGGGGGACCATTCTCTGTCCGAACTGGGATACGATGCTG +
Preference number: 5 (lower is better)
Translates to: PRPGEGESSGNLPGC*GWGTILCPNWDTML
Trigger: CAGCATCGTATCCCAGTTCGGACAGAGAATGGTCCCCCAGCCCCAGCAGCCTGGTAGATTGCCAGAGGACTCCCCCTCACCTGGCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221297.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp CGATGCCCGAGCCTCCCACAGACTGTGGTGACTGGTTGGCTGACCTaGCTCCGTTGTCACTGGCTTGTTTGGGGAGCCCACCAGGATCCC +
Preference number: 5 (lower is better)
Translates to: RCPSLPQTVVTGWLT*LRCHWLVWGAHQDP
Trigger: GGGATCCTGGTGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCTCGGGCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp CTCTCTGTGGTCACTGAGGCCACCGCAGAGGGAGATGGCGATGGATaGCAGGTCCCTCAGGCTGTCGGAGGTGCTCTCCACACCACTGTC +
Preference number: 5 (lower is better)
Translates to: LSVVTEATAEGDGDG*QVPQAVGGALHTTV
Trigger: GACAGTGGTGTGGAGAGCACCTCCGACAGCCTGAGGGACCTGCCATCCATCGCCATCTCCCTCTGCGGTGGCCTCAGTGACCACAGAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: MPELPLGMRETAVNLCRPADLAP*SLACLG
Trigger: CCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCGGAGGACACCCATCTaGCCGAAGCGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWRRTPI*PKRTWK
Trigger: TTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGACGACTGTGCGGTGTaGGGATATGGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWDDCAV*GYGALS
Trigger: GCTCAAGGCCCCATATCCCAACACCGCACAGTCGTC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 90 bp GATGGCTTGGCGGCTGCGTGCTCTTCATCACTGGAGGATGACTCATaGTTTATCCTGGTGGCCAGGCCAAGCTGGGCAGGCTGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: DGLAAACSSSLEDDS*FILVARPSWAGCSP
Trigger: CGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp ACTTTCTCTCGGGAGCGGAGGACACCCATCTTGCCGAAGCGGACGTaGAAAGGGGAGCACTGCAGACTGCCATTGGGCTGCCGGATGACA +
Preference number: 5 (lower is better)
Translates to: TFSRERRTPILPKRT*KGEHCRLPLGCRMT
Trigger: TGTCATCCGGCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCGCTCCCGAGAGAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp TTCCCCAGAGAACCAGTGGATGGGGTGTCGCTGGGAGGCAGGCCCTaGGCAGCTGTAGTGGGATCCAGGCACCTGATTCTGTCTACAGAG +
Preference number: 5 (lower is better)
Translates to: FPREPVDGVSLGGRP*AAVVGSRHLILSTE
Trigger: CTCTGTAGACAGAATCAGGTGCCTGGATCCCACTACAGCTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCACTGGTTCTCTGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp TCCACACCACTGTCGATGCCCGAGCCTCCCACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCGTTGTCACTGGCTTGTTTGGGGAGC +
Preference number: 5 (lower is better)
Translates to: STPLSMPEPPTDCGD*LADLAPLSLACLGS
Trigger: GCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCTCGGGCATCGACAGTGGTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCACTGCAGACTGCCATaGGGCTGCCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWHCRLP*GCRMTM
Trigger: CATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCAGGATCCCCATTCTaGGGGAAATACAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWPGSPF*GKYRAA
Trigger: GGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTGG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGAGCTGATGTTGGTCTaGGCATGCTCCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWELMLV*ACSCTS
Trigger: GCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp GGTGGCTCGAACCTGATGGCTTGGCGGCTGCGTGCTCTTCATCACTaGAGGATGACTCATGCTTTATCCTGGTGGCCAGGCCAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: GGSNLMAWRLRALHH*RMTHALSWWPGQAG
Trigger: CCCAGCTTGGCCTGGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATCAGGTTCGAGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGCACTGCAGACTGCCATaGGGCTGCCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRHCRLP*GCRMTM
Trigger: CATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTG...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGCTCAGAGTCACTTTTaGGTGTTGAGGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRAQSHF*VLRAGS
Trigger: GCTCCCGGCCCTCAACACCAAAAAGTGACTCTGAGC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAGTGGAGAAGAGGACTTaGCAGCCTGTGGCAATTCAC +
Preference number: 5 (lower is better)
Translates to: MPELPLGMRETAVNLCRPVEKRT*QPVAIH
Trigger: GTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCAC...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAACCTTGACCACGAGGTaGGGGTCATCGATGATAGCA +
Preference number: 5 (lower is better)
Translates to: MPELPLGMRETAVNLCRPTLTTR*GSSMIA
Trigger: TGCTATCATCGATGACCCCAACCTCGTGGTCAAGGT...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCACTTTGTGGTACAGCTTaGCAATGCCCTGGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: MPELPLGMRETAVNLCRPLCGTA*QCPGES
Trigger: GGACTCACCAGGGCATTGCAAAGCTGTACCACAAAG...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 90 bp CGGAGGACACCCATCTTGCCGAAGCGGACGTGGAAAGGGGAGCACTaGAGACTGCCATTGGGCTGCCGGATGACAATGATGTCGATGCAT +
Preference number: 5 (lower is better)
Translates to: RRTPILPKRTWKGEH*RLPLGCRMTMMSMH
Trigger: ATGCATCGACATCATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp GTGGTGACTGGTTGGCTGACCTGGCTCCGTTGTCACTGGCTTGTTTaGGGAGCCCACCAGGATCCCCATTCTTGGGGAAATACAGGGCTG +
Preference number: 5 (lower is better)
Translates to: VVTGWLTWLRCHWLV*GAHQDPHSWGNTGL
Trigger: CAGCCCTGTATTTCCCCAAGAATGGGGATCCTGGTGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp ATCCTGGTGGCCAGGCCAAGCTGGGCAGGCTGCTCTCCGGTATTGTaGCCTTTCCCAGTCAGGCACTGTTCAGGCTTGCTTTCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: ILVARPSWAGCSPVL*PFPVRHCSGLLSSL
Trigger: CAAAGAGGAAAGCAAGCCTGAACAGTGCCTGACTGGGAAAGGCCACAATACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCACCAGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCGGAGGACACCCATCTaGCCGAAGCGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVARRTPI*PKRTWK
Trigger: TTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCATCCACGGACTCCCCATaGATTTCTATGTCCACCACT +
Preference number: 5 (lower is better)
Translates to: MPELPLGMRETAVNLCRPSTDSP*ISMSTT
Trigger: AGTGGTGGACATAGAAATCAATGGGGAGTCCGTGGA...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGACGACTGTGCGGTGTaGGGATATGGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPDDCAV*GYGALS
Trigger: GCTCAAGGCCCCATATCCCAACACCGCACAGTCGTC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPADLAP*SLACLG
Trigger: CCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGACCTTGACCACGAGGTaGGGGTCATCGATGATAGCA +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWTLTTR*GSSMIA
Trigger: TGCTATCATCGATGACCCCAACCTCGTGGTCAAGGT...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCTTTGTGGTACAGCTTaGCAATGCCCTGGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWLCGTA*QCPGES
Trigger: GGACTCACCAGGGCATTGCAAAGCTGTACCACAAAG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp CCCAAGGACTCGAGATCCTCCTCGTTCACAAACTGCATTTCCGTCTaGGCCTTACTCTGGTGGATGAGCAGTCCCCGGGCCATTGTTGGC +
Preference number: 5 (lower is better)
Translates to: PKDSRSSSFTNCISV*ALLWWMSSPRAIVG
Trigger: GCCAACAATGGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTTTGTGAACGAGGAGGATCTCGAGTCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp CTGCGTGCTCTTCATCACTGGAGGATGACTCATGCTTTATCCTGGTaGCCAGGCCAAGCTGGGCAGGCTGCTCTCCGGTATTGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: LRALHHWRMTHALSW*PGQAGQAALRYCGL
Trigger: AAGGCCACAATACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCGGAGGACACCCATCTaGCCGAAGCGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: GRNASLLGRWPHISLPSSRRTPI*PKRTWK
Trigger: TTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTACGGAGGACACCCATCTaGCCGAAGCGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLRRTPI*PKRTWK
Trigger: TTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCG...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCCGGAGGACACCCATCTaGCCGAAGCGGACGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPRRTPI*PKRTWK
Trigger: TTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCG...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGCTCAGAGTCACTTTTaGGTGTTGAGGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVAAQSHF*VLRAGS
Trigger: GCTCCCGGCCCTCAACACCAAAAAGTGACTCTGAGC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCATTTCCAGGTTATTCTTaGGCGTCAACCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: MPELPLGMRETAVNLCRPFPGYS*ASTCLQ
Trigger: CTGCAGACAGGTTGACGCCAAAGAATAACCTGGAAA...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCGACGACTGTGCGGTGTaGGGATATGGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GRNASLLGRWPHISLPSSDDCAV*GYGALS
Trigger: GCTCAAGGCCCCATATCCCAACACCGCACAGTCGTC...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLADLAP*SLACLG
Trigger: CCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATGCCAGAGCTTCCCCTGGGCATGAGGGAGACGGCCGTGAACCTCTGCAGGCCAAGGCACTGTTCAGGCTaGCTTTCCTCTTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: MPELPLGMRETAVNLCRPRHCSG*LSSLIV
Trigger: CACAATCAAAGAGGAAAGCAAGCCTGAACAGTGCCT...TGGCCTGCAGAGGTTCACGGCCGTCTCCCTCATGCCCAGGGGAAGCTCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCTGAACACCACATCATaGGGGCCGTTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWLNTTS*GPFFNF
Trigger: GAAGTTGAAGAACGGCCCCAATGATGTGGTGTTCAG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTGAGCTGATGTTGGTCTaGGCATGCTCCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVAELMLV*ACSCTS
Trigger: GCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTC...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 90 bp GACAAGAGAGAGAGGTGGCTCGAACCTGATGGCTTGGCGGCTGCGTaGTCTTCATCACTGGAGGATGACTCATGCTTTATCCTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: DKRERWLEPDGLAAA*SSSLEDDSCFILVA
Trigger: GGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATCAGGTTCGAGCCACCTCTCTCTCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGTTTCCAGGTTATTCTTaGGCGTCAACCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWFPGYS*ASTCLQ
Trigger: CTGCAGACAGGTTGACGCCAAAGAATAACCTGGAAA...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCCCAGGATCCCCATTCTaGGGGAAATACAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPPGSPF*GKYRAA
Trigger: GGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTGG...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGCTGAACACCACATCATaGGGGCCGTTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRLNTTS*GPFFNF
Trigger: GAAGTTGAAGAACGGCCCCAATGATGTGGTGTTCAG...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCGAGCTGATGTTGGTCTaGGCATGCTCCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPELMLV*ACSCTS
Trigger: GCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTC...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 90 bp CATTCTTGGGGAAATACAGGGCTGCCACTTCAGGGTCCATGTCCGTaGGGTCGTCCAGATAAACACCATCAGCTCCAAGGTGTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: HSWGNTGLPLQGPCP*GRPDKHHQLQGVGS
Trigger: GGAGCCGACACCTTGGAGCTGATGGTGTTTATCTGGACGACCTCACGGACATGGACCCTGAAGTGGCAGCCCTGTATTTCCCCAAGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp GTGGGATCCAGGCACCTGATTCTGTCTACAGAGTTCCTCTTCAGCTaGCTTTCCATTCTCGCAGCTCCTTCTGACAGGATGGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: VGSRHLILSTEFLFS*LSILAAPSDRMGDV
Trigger: CACGTCCCCCATCCTGTCAGAAGGAGCTGCGAGAATGGAAAGCCAGCTGAAGAGGAACTCTGTAGACAGAATCAGGTGCCTGGATCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp AGATCCTCCTCGTTCACAAACTGCATTTCCGTCTGGGCCTTACTCTaGTGGATGAGCAGTCCCCGGGCCATTGTTGGCGACTGGTCACTA +
Preference number: 5 (lower is better)
Translates to: RSSSFTNCISVWALL*WMSSPRAIVGDWSL
Trigger: TAGTGACCAGTCGCCAACAATGGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTTTGTGAACGAGGAGGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGTTTCCAGGTTATTCTTaGGCGTCAACCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRFPGYS*ASTCLQ
Trigger: CTGCAGACAGGTTGACGCCAAAGAATAACCTGGAAA...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGCTGGACTCTTTCATCTaGTGTGGAGAAGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWLDSFI*CGEEDF
Trigger: AAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAG...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGGACGACTGTGCGGTGTaGGGATATGGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVDDCAV*GYGALS
Trigger: GCTCAAGGCCCCATATCCCAACACCGCACAGTCGTC...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCCCAGGATCCCCATTCTaGGGGAAATACAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RVTMASKGHERTSQELNGPGSPF*GKYRAA
Trigger: GGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTGG...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATACCTTGACCACGAGGTaGGGGTCATCGATGATAGCA +
Preference number: 5 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHTLTTR*GSSMIA
Trigger: TGCTATCATCGATGACCCCAACCTCGTGGTCAAGGT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRIPQWP*AKVSGK
Trigger: CTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGGGCTTGCTTTCCTCTTaGATTGTGGCATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWGLLSS*IVAFLP
Trigger: AGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGCC...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCTTTGTGGTACAGCTTaGCAATGCCCTGGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVALCGTA*QCPGES
Trigger: GGACTCACCAGGGCATTGCAAAGCTGTACCACAAAG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCGAGCTGATGTTGGTCTaGGCATGCTCCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: RVTMASKGHERTSQELNGELMLV*ACSCTS
Trigger: GCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTC...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 90 bp TACAGAGTTCCTCTTCAGCTGGCTTTCCATTCTCGCAGCTCCTTCTaGCAGGATGGGGGACGTGGCCAGGTACATGGGGATGATTTCCTG +
Preference number: 5 (lower is better)
Translates to: YRVPLQLAFHSRSSF*QDGGRGQVHGDDFL
Trigger: CAGGAAATCATCCCCATGTACCTGGCCACGTCCCCCATCCTGTCAGAAGGAGCTGCGAGAATGGAAAGCCAGCTGAAGAGGAACTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp CTTTTTGGTGTTGAGGGCCGGGAGCCTGAAGGACTTTCCGAAGCATaGAAGTGGCAAGACTGCAGAGGACAAGAGCTAGAGAGAACTCCC +
Preference number: 5 (lower is better)
Translates to: LFGVEGREPEGLSEA*KWQDCRGQELERTP
Trigger: GGGAGTTCTCTCTAGCTCTTGTCCTCTGCAGTCTTGCCACTTCCATGCTTCGGAAAGTCCTTCAGGCTCCCGGCCCTCAACACCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221297.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp TCCTCCTCGTTCACAAACTGCATTTCCGTCTGGGCCTTACTCTGGTaGATGAGCAGTCCCCGGGCCATTGTTGGCGACTGGTCACTAAAA +
Preference number: 5 (lower is better)
Translates to: SSSFTNCISVWALLW*MSSPRAIVGDWSLK
Trigger: TTTTAGTGACCAGTCGCCAACAATGGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTTTGTGAACGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTCACTGCAGACTGCCATaGGGCTGCCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPHCRLP*GCRMTM
Trigger: CATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTG...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTCCACGGACTCCCCATaGATTTCTATGTCCACCACT +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVASTDSP*ISMSTT
Trigger: AGTGGTGGACATAGAAATCAATGGGGAGTCCGTGGA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGCCTCTGGGTTTAAGTGCAGATGCAAATAAGCAACTTGAGAGAACCGGGGTGGCTCAGAGTCACTTTTaGGTGTTGAGGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: GPLGLSADANKQLERTGVAQSHF*VLRAGS
Trigger: GCTCCCGGCCCTCAACACCAAAAAGTGACTCTGAGC...CACCCCGGTTCTCTCAAGTTGCTTATTTGCATCTGCACTTAAACCCAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGCTCAGAGTCACTTTTaGGTGTTGAGGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPAQSHF*VLRAGS
Trigger: GCTCCCGGCCCTCAACACCAAAAAGTGACTCTGAGC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCGTGGAGAAGAGGACTTaGCAGCCTGTGGCAATTCAC +
Preference number: 5 (lower is better)
Translates to: GRNASLLGRWPHISLPSSVEKRT*QPVAIH
Trigger: GTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCAC...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGTGGAGAAGAGGACTTaGCAGCCTGTGGCAATTCAC +
Preference number: 5 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLVEKRT*QPVAIH
Trigger: GTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCAC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGACGACTGTGCGGTGTaGGGATATGGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: NPKGKYLTTEACLRCARWDDCAV*GYGALS
Trigger: GCTCAAGGCCCCATATCCCAACACCGCACAGTCGTC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCCAGGATCCCCATTCTaGGGGAAATACAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVPGSPF*GKYRAA
Trigger: GGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTGG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPADLAP*SLACLG
Trigger: CCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYADLAP*SLACLG
Trigger: CCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGC...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCACCTTGACCACGAGGTaGGGGTCATCGATGATAGCA +
Preference number: 5 (lower is better)
Translates to: GRNASLLGRWPHISLPSSTLTTR*GSSMIA
Trigger: TGCTATCATCGATGACCCCAACCTCGTGGTCAAGGT...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGGCTTGCTTTCCTCTTaGATTGTGGCATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRGLLSS*IVAFLP
Trigger: AGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGCC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCTGAACACCACATCATaGGGGCCGTTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVALNTTS*GPFFNF
Trigger: GAAGTTGAAGAACGGCCCCAATGATGTGGTGTTCAG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCTTTGTGGTACAGCTTaGCAATGCCCTGGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: GRNASLLGRWPHISLPSSLCGTA*QCPGES
Trigger: GGACTCACCAGGGCATTGCAAAGCTGTACCACAAAG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGGGGAAAAACAGGTTCTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAGAACCTGTTTTTCCC...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCAGGGACACTCCCACTaGCTTGTAGGAATACACATC +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVAQGHSH*LVGIHI
Trigger: GATGTGTATTCCTACAAGCAAGTGGGAGTGTCCCTG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGGAGCTGATGTTGGTCTaGGCATGCTCCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVELMLV*ACSCTS
Trigger: GCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTC...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGCACTGCAGACTGCCATaGGGCTGCCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: NPKGKYLTTEACLRCARWHCRLP*GCRMTM
Trigger: CATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTG...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTCCACGGACTCCCCATaGATTTCTATGTCCACCACT +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPSTDSP*ISMSTT
Trigger: AGTGGTGGACATAGAAATCAATGGGGAGTCCGTGGA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGCTCAGAGTCACTTTTaGGTGTTGAGGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPAQSHF*VLRAGS
Trigger: GCTCCCGGCCCTCAACACCAAAAAGTGACTCTGAGC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCACCTTGACCACGAGGTaGGGGTCATCGATGATAGCA +
Preference number: 5 (lower is better)
Translates to: RVTMASKGHERTSQELNGTLTTR*GSSMIA
Trigger: TGCTATCATCGATGACCCCAACCTCGTGGTCAAGGT...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPIPQWP*AKVSGK
Trigger: CTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVAIPQWP*AKVSGK
Trigger: CTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS-3UTR CAA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCAGGCACTGTTCAGGCTaGCTTTCCTCTTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPRHCSG*LSSLIV
Trigger: CACAATCAAAGAGGAAAGCAAGCCTGAACAGTGCCT...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATAGGCACTGTTCAGGCTaGCTTTCCTCTTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHRHCSG*LSSLIV
Trigger: CACAATCAAAGAGGAAAGCAAGCCTGAACAGTGCCT...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTTCTGAGATGATGACTTaGTCGTCCCAATTCCACAGG +
Preference number: 5 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFSEMMT*SSQFHR
Trigger: CCTGTGGAATTGGGACGACAAAGTCATCATCTCAGA...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCCTTTGTGGTACAGCTTaGCAATGCCCTGGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: RVTMASKGHERTSQELNGLCGTA*QCPGES
Trigger: GGACTCACCAGGGCATTGCAAAGCTGTACCACAAAG...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCCAGGGACACTCCCACTaGCTTGTAGGAATACACATC +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPQGHSH*LVGIHI
Trigger: GATGTGTATTCCTACAAGCAAGTGGGAGTGTCCCTG...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGGAGCTGATGTTGGTCTaGGCATGCTCCTGCACCAGC +
Preference number: 5 (lower is better)
Translates to: NPKGKYLTTEACLRCARWELMLV*ACSCTS
Trigger: GCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTC...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCCGTGATGCCTCCCACTaGGAGCTACAGACACCATCC +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPRDASH*ELQTPS
Trigger: GGATGGTGTCTGTAGCTCCAAGTGGGAGGCATCACG...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000238839.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTACATTGTCATCTCTTTaGAGATTGTCCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVATLSSL*RLSNWA
Trigger: GGCCCAGTTGGACAATCTCAAAAGAGATGACAATGT...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CGAGCGAGCGAGCGAGCGAGCCGAGGGAGAAATGCTTCTCTCTTAGGCAGGTGGTCAGATGTGTTGACATaGTCATCTCTTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: RASERASRGRNASLLGRWSDVLT*SSLLRL
Trigger: CAATCTCAAAAGAGATGACAATGTCAACACATCTGA...CCACCTGCCTAAGAGAGAAGCATTTCTCCCTCGGCTCGCTCGCTCGCTCGCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTTTCCAGGTTATTCTTaGGCGTCAACCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPFPGYS*ASTCLQ
Trigger: CTGCAGACAGGTTGACGCCAAAGAATAACCTGGAAA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTGTGGAGAAGAGGACTTaGCAGCCTGTGGCAATTCAC +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPVEKRT*QPVAIH
Trigger: GTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCAC...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTGGCTTGCTTTCCTCTTaGATTGTGGCATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFGLLSS*IVAFLP
Trigger: AGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGCC...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCAGGCACTGTTCAGGCTaGCTTTCCTCTTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPRHCSG*LSSLIV
Trigger: CACAATCAAAGAGGAAAGCAAGCCTGAACAGTGCCT...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCTCTGAGATGATGACTTaGTCGTCCCAATTCCACAGG +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPSEMMT*SSQFHR
Trigger: CCTGTGGAATTGGGACGACAAAGTCATCATCTCAGA...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGCATGAGGTGTGCTAAACCCGGGAAAAACAGGTTCTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: LIAGADGTGGCSMRCAKPGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAGAACCTGTTTTTCCC...GGGTTTAGCACACCTCATGCTGCACCCTCCAGTCCCGTCTGCTCCAGCAATTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTGGGAAAAACAGGTTCTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAGAACCTGTTTTTCCC...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTTCCACGGACTCCCCATaGATTTCTATGTCCACCACT +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPSTDSP*ISMSTT
Trigger: AGTGGTGGACATAGAAATCAATGGGGAGTCCGTGGA...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCACATTGTCATCTCTTTaGAGATTGTCCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPTLSSL*RLSNWA
Trigger: GGCCCAGTTGGACAATCTCAAAAGAGATGACAATGT...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GCTGCTGAGTCCACACTAGTGGCTCCTCCTTGCTGGGTAGCAGGACGCAGAAGGCTTAGGAATATCATCTaGGAATGGTGGTACATCATT +
Preference number: 5 (lower is better)
Translates to: AAESTLVAPPCWVAGRRRLRNII*EWWYII
Trigger: AATGATGTACCACCATTCCAAGATGATATTCCTAAG...CCTTCTGCGTCCTGCTACCCAGCAAGGAGGAGCCACTAGTGTGGACTCAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGTGGAGAAGAGGACTTaGCAGCCTGTGGCAATTCAC +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPVEKRT*QPVAIH
Trigger: GTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCAC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAAGACGACTGTGCGGTGTaGGGATATGGGGCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEDDCAV*GYGALS
Trigger: GCTCAAGGCCCCATATCCCAACACCGCACAGTCGTC...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAAGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEADLAP*SLACLG
Trigger: CCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGC...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GTGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTTCCAAAAATGCATCTTaGGTGATCTCTCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: VATYQPSQQLQGPHNLSFSKNAS*VISLWS
Trigger: TGACCACAGAGAGATCACCAAAGATGCATTTTTGGA...AAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGCCGAGTTTCTCCATCAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTCCAAAAATGCATCTTaGGTGATCTCTCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: RAEFLHQWAPTADDSGFHSKNAS*VISLWS
Trigger: TGACCACAGAGAGATCACCAAAGATGCATTTTTGGA...ATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTGATGGAGAAACTCGGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGACCTTGACCACGAGGTaGGGGTCATCGATGATAGCA +
Preference number: 5 (lower is better)
Translates to: NPKGKYLTTEACLRCARWTLTTR*GSSMIA
Trigger: TGCTATCATCGATGACCCCAACCTCGTGGTCAAGGT...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTAGGCTTGCTTTCCTCTTaGATTGTGGCATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLGLLSS*IVAFLP
Trigger: AGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGCC...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTCTGAGATGATGACTTaGTCGTCCCAATTCCACAGG +
Preference number: 5 (lower is better)
Translates to: RVTMASKGHERTSQELNGSEMMT*SSQFHR
Trigger: CCTGTGGAATTGGGACGACAAAGTCATCATCTCAGA...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCCTTTGTGGTACAGCTTaGCAATGCCCTGGTGAGTCC +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPLCGTA*QCPGES
Trigger: GGACTCACCAGGGCATTGCAAAGCTGTACCACAAAG...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCGGGAAAAACAGGTTCTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: GRNASLLGRWPHISLPSSGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAGAACCTGTTTTTCCC...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCAGGGACACTCCCACTaGCTTGTAGGAATACACATC +
Preference number: 5 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVQGHSH*LVGIHI
Trigger: GATGTGTATTCCTACAAGCAAGTGGGAGTGTCCCTG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTCAGGGACACTCCCACTaGCTTGTAGGAATACACATC +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPQGHSH*LVGIHI
Trigger: GATGTGTATTCCTACAAGCAAGTGGGAGTGTCCCTG...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATTCCACGGACTCCCCATaGATTTCTATGTCCACCACT +
Preference number: 5 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYSTDSP*ISMSTT
Trigger: AGTGGTGGACATAGAAATCAATGGGGAGTCCGTGGA...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTTTTCCAGGTTATTCTTaGGCGTCAACCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPFPGYS*ASTCLQ
Trigger: CTGCAGACAGGTTGACGCCAAAGAATAACCTGGAAA...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATCCAAAAATGCATCTTaGGTGATCTCTCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLSKNAS*VISLWS
Trigger: TGACCACAGAGAGATCACCAAAGATGCATTTTTGGA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTATTCCACAGTGGCCTTaGGCAAAGGTTTCTGGAAAG +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPIPQWP*AKVSGK
Trigger: CTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAAT...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
CDS-3UTR CAA 90 bp AGGGTTACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCGGCTTGCTTTCCTCTTaGATTGTGGCATTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: RVTMASKGHERTSQELNGGLLSS*IVAFLP
Trigger: AGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGCC...GCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGTAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCCTGAACACCACATCATaGGGGCCGTTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPLNTTS*GPFFNF
Trigger: GAAGTTGAAGAACGGCCCCAATGATGTGGTGTTCAG...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGCTGAACACCACATCATaGGGGCCGTTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: NPKGKYLTTEACLRCARWLNTTS*GPFFNF
Trigger: GAAGTTGAAGAACGGCCCCAATGATGTGGTGTTCAG...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGCAGGGACACTCCCACTaGCTTGTAGGAATACACATC +
Preference number: 5 (lower is better)
Translates to: NPKGKYLTTEACLRCARWQGHSH*LVGIHI
Trigger: GATGTGTATTCCTACAAGCAAGTGGGAGTGTCCCTG...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 90 bp GAAACTTGTAGCCATTCTGGCTTACTTTGTGGTACAGCTTTGCAATaGCCTGGTGAGTCCAATCCTTTCCCAGCGTGGGCAAAATGTGAC +
Preference number: 5 (lower is better)
Translates to: ETCSHSGLLCGTALQ*PGESNPFPAWAKCD
Trigger: GTCACATTTTGCCCACGCTGGGAAAGGATTGGACTCACCAGGGCATTGCAAAGCTGTACCACAAAGTAAGCCAGAATGGCTACAAGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGACATTGTCATCTCTTTaGAGATTGTCCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVTLSSL*RLSNWA
Trigger: GGCCCAGTTGGACAATCTCAAAAGAGATGACAATGT...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTTCAGATGTGTTGACATaGTCATCTCTTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVASDVLT*SSLLRL
Trigger: CAATCTCAAAAGAGATGACAATGTCAACACATCTGA...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TTAGCGGCATCCTTCCTGGTGGGCGTAAGTGCTGCTGAGTCCACACTAGTGGCTCTTAGGAATATCATCTaGGAATGGTGGTACATCATT +
Preference number: 5 (lower is better)
Translates to: LAASFLVGVSAAESTLVALRNII*EWWYII
Trigger: AATGATGTACCACCATTCCAAGATGATATTCCTAAG...AGCCACTAGTGTGGACTCAGCAGCACTTACGCCCACCAGGAAGGATGCCGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGCTGGACTCTTTCATCTaGTGTGGAGAAGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVLDSFI*CGEEDF
Trigger: AAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAG...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ACCATGGCCTCCAAAGGTCACGAGAGAACAAGCCAGGAGCTTAATGGCTTTCCTCTGGACTCTTTCATCTaGTGTGGAGAAGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: TMASKGHERTSQELNGFPLDSFI*CGEEDF
Trigger: AAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAG...AGGAAAGCCATTAAGCTCCTGGCTTGTTCTCTCGTGACCTTTGGAGGCCATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATAGGCACTGTTCAGGCTaGCTTTCCTCTTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYRHCSG*LSSLIV
Trigger: CACAATCAAAGAGGAAAGCAAGCCTGAACAGTGCCT...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCACATTGTCATCTCTTTaGAGATTGTCCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPTLSSL*RLSNWA
Trigger: GGCCCAGTTGGACAATCTCAAAAGAGATGACAATGT...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp AATCCAAAAGGAAAGTATCTGACGACAGAAGCCTGTCTCAGATGCGCCAGGTGGACATTGTCATCTCTTTaGAGATTGTCCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: NPKGKYLTTEACLRCARWTLSSL*RLSNWA
Trigger: GGCCCAGTTGGACAATCTCAAAAGAGATGACAATGT...CCACCTGGCGCATCTGAGACAGGCTTCTGTCGTCAGATACTTTCCTTTTGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TGGCCACATATCAGCCTTCCCAGCAGCTCCAGGGTCCCCACAACCTATCCTTTATCAGATGTGTTGACATaGTCATCTCTTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: WPHISLPSSSRVPTTYPLSDVLT*SSLLRL
Trigger: CAATCTCAAAAGAGATGACAATGTCAACACATCTGA...TAAAGGATAGGTTGTGGGGACCCTGGAGCTGCTGGGAAGGCTGATATGTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGGAGAAATGCTTCTCTCTTAGGCAGGTGGCCACATATCAGCCTTCCCAGCAGCCTTAGGAATATCATCTaGGAATGGTGGTACATCATT +
Preference number: 5 (lower is better)
Translates to: GRNASLLGRWPHISLPSSLRNII*EWWYII
Trigger: AATGATGTACCACCATTCCAAGATGATATTCCTAAG...GCTGCTGGGAAGGCTGATATGTGGCCACCTGCCTAAGAGAGAAGCATTTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCAGCGAGGCCCATGTTCCCCTTAGGAATATCATCTaGGAATGGTGGTACATCATT +
Preference number: 5 (lower is better)
Translates to: SKKSKPRLGLRPSEAHVPLRNII*EWWYII
Trigger: AATGATGTACCACCATTCCAAGATGATATTCCTAAG...GGGAACATGGGCCTCGCTGGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAGTGGGCGCCCACAGCAGATGACAGTGGCTTTCATTACATTCCTGTGAACTATCTGGACTCTTTCATCTaGTGTGGAGAAGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: QWAPTADDSGFHYIPVNYLDSFI*CGEEDF
Trigger: AAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAG...ATAGTTCACAGGAATGTAATGAAAGCCACTGTCATCTGCTGTGGGCGCCCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CATCACCCGTATTGCACATTAACTAATTGCTGGAGCAGACGGGACTGGAGGGTGTCCAAAAATGCATCTTaGGTGATCTCTCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: HHPYCTLTNCWSRRDWRVSKNAS*VISLWS
Trigger: TGACCACAGAGAGATCACCAAAGATGCATTTTTGGA...CACCCTCCAGTCCCGTCTGCTCCAGCAATTAGTTAATGTGCAATACGGGTGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCGGGAAAAACAGGTTCTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAGAACCTGTTTTTCCC...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 90 bp GTTGGGGTCATCGATGATAGCAGGGTTGTCGGCAAATTGCTGATATaGCACGGCTTGTTCCAAAAATGCATCTTTGGTGATCTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VGVIDDSRVVGKLLI*HGLFQKCIFGDLSV
Trigger: CACAGAGAGATCACCAAAGATGCATTTTTGGAACAAGCCGTGTCATATCAGCAATTTGCCGACAACCCTGCTATCATCGATGACCCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 90 bp ACGAGGTTGGGGTCATCGATGATAGCAGGGTTGTCGGCAAATTGCTaGTATGACACGGCTTGTTCCAAAAATGCATCTTTGGTGATCTCT +
Preference number: 5 (lower is better)
Translates to: TRLGSSMIAGLSANC*YDTACSKNASLVIS
Trigger: AGAGATCACCAAAGATGCATTTTTGGAACAAGCCGTGTCATATCAGCAATTTGCCGACAACCCTGCTATCATCGATGACCCCAACCTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp GGCACTGGTATAACAATGCACACTGTCATTAGGCCTCATTCATGGATAATGGGGTCTGAGATGATGACTTaGTCGTCCCAATTCCACAGG +
Preference number: 5 (lower is better)
Translates to: GTGITMHTVIRPHSWIMGSEMMT*SSQFHR
Trigger: CCTGTGGAATTGGGACGACAAAGTCATCATCTCAGA...CCCCATTATCCATGAATGAGGCCTAATGACAGTGTGCATTGTTATACCAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR CAA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAACAGGGACACTCCCACTaGCTTGTAGGAATACACATC +
Preference number: 5 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAEQGHSH*LVGIHI
Trigger: GATGTGTATTCCTACAAGCAAGTGGGAGTGTCCCTG...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTCACTGCAGACTGCCATaGGGCTGCCGGATGACAATG +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLHCRLP*GCRMTM
Trigger: CATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTG...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGGCTCAGAGTCACTTTTaGGTGTTGAGGGCCGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSILFITEISSSASSTTQAQSHF*VLRAGS
Trigger: GCTCCCGGCCCTCAACACCAAAAAGTGACTCTGAGC...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGCCAGGATCCCCATTCTaGGGGAAATACAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SSILFITEISSSASSTTQPGSPF*GKYRAA
Trigger: GGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTGG...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CAATACTGCAAGGGAACGTCTAAAAAGTCAAAGCCAAGGCTAGGGCTGAGACCCTCAGATGTGTTGACATaGTCATCTCTTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: QYCKGTSKKSKPRLGLRPSDVLT*SSLLRL
Trigger: CAATCTCAAAAGAGATGACAATGTCAACACATCTGA...GGGTCTCAGCCCTAGCCTTGGCTTTGACTTTTTAGACGTTCCCTTGCAGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp ATTAGGCCTCATTCATGGATAATGGGGATAGAACTTGGATGTGCTTGCTTGCATTTTCCAGGTTATTCTTaGGCGTCAACCTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: IRPHSWIMGIELGCACLHFPGYS*ASTCLQ
Trigger: CTGCAGACAGGTTGACGCCAAAGAATAACCTGGAAA...ATGCAAGCAAGCACATCCAAGTTCTATCCCCATTATCCATGAATGAGGCCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000067124.6
CDS-3UTR CAA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAACTGGACTCTTTCATCTaGTGTGGAGAAGAGGACTTT +
Preference number: 5 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAELDSFI*CGEEDF
Trigger: AAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAG...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 90 bp GGGTACGTTGAAATCGAGGGGAAGTTTTCCTTAGGAATATCATCTTaGAATGGTGGTACATCATTAGGAAGAGTTCTGCTTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: GYVEIEGKFSLGISS*NGGTSLGRVLLPSI
Trigger: GATGGATGGAAGCAGAACTCTTCCTAATGATGTACCACCATTCCAAGATGATATTCCTAAGGAAAACTTCCCCTCGATTTCAACGTACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTGTGGAGAAGAGGACTTaGCAGCCTGTGGCAATTCAC +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLVEKRT*QPVAIH
Trigger: GTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCAC...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATCCAAAAATGCATCTTaGGTGATCTCTCTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAESKNAS*VISLWS
Trigger: TGACCACAGAGAGATCACCAAAGATGCATTTTTGGA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTCCACGGACTCCCCATaGATTTCTATGTCCACCACT +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLSTDSP*ISMSTT
Trigger: AGTGGTGGACATAGAAATCAATGGGGAGTCCGTGGA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTCTGAACACCACATCATaGGGGCCGTTCTTCAACTTC +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLLNTTS*GPFFNF
Trigger: GAAGTTGAAGAACGGCCCCAATGATGTGGTGTTCAG...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAATCAGATGTGTTGACATaGTCATCTCTTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAESDVLT*SSLLRL
Trigger: CAATCTCAAAAGAGATGACAATGTCAACACATCTGA...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCGTATACAGTCCACAGCAATCAAAATACACACAAAACCACCGTGGTGGCAGAACTTAGGAATATCATCTaGGAATGGTGGTACATCATT +
Preference number: 5 (lower is better)
Translates to: SYTVHSNQNTHKTTVVAELRNII*EWWYII
Trigger: AATGATGTACCACCATTCCAAGATGATATTCCTAAG...TTCTGCCACCACGGTGGTTTTGTGTGTATTTTGATTGCTGTGGACTGTATACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTAGGCACTGTTCAGGCTaGCTTTCCTCTTTGATTGTG +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLRHCSG*LSSLIV
Trigger: CACAATCAAAGAGGAAAGCAAGCCTGAACAGTGCCT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTTCTGAGATGATGACTTaGTCGTCCCAATTCCACAGG +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLSEMMT*SSQFHR
Trigger: CCTGTGGAATTGGGACGACAAAGTCATCATCTCAGA...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTACATTGTCATCTCTTTaGAGATTGTCCAACTGGGCC +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLTLSSL*RLSNWA
Trigger: GGCCCAGTTGGACAATCTCAAAAGAGATGACAATGT...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp CTTTTCATTTTTCACATTGTTCTGAGACAGTTCACAGCAACCTTCTATCAGCTTGGGAAAAACAGGTTCTaGATGTCTGTCAAACACTGG +
Preference number: 5 (lower is better)
Translates to: LFIFHIVLRQFTATFYQLGKNRF*MSVKHW
Trigger: CCAGTGTTTGACAGACATCAAGAACCTGTTTTTCCC...AAGCTGATAGAAGGTTGCTGTGAACTGTCTCAGAACAATGTGAAAAATGAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGTCAGATGTGTTGACATaGTCATCTCTTTTGAGATTG +
Preference number: 5 (lower is better)
Translates to: SSILFITEISSSASSTTQSDVLT*SSLLRL
Trigger: CAATCTCAAAAGAGATGACAATGTCAACACATCTGA...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS-3UTR CAA 90 bp TCATCCATCTTGTTTATTACAGAAATTTCTAGCTCTGCATCAAGCACAACACAGCTTAGGAATATCATCTaGGAATGGTGGTACATCATT +
Preference number: 5 (lower is better)
Translates to: SSILFITEISSSASSTTQLRNII*EWWYII
Trigger: AATGATGTACCACCATTCCAAGATGATATTCCTAAG...CTGTGTTGTGCTTGATGCAGAGCTAGAAATTTCTGTAATAAACAAGATGGATGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp TGCTCGACGACTGTGCGGTGTTGGGATATGGGGCCTTaGGCTCTTCGGCCACGGGTGAAGGTGGGGCTGCCG +
Preference number: 6 (lower is better)
Translates to: CSTTVRCWDMGP*ALRPRVKVGLP
Trigger: CGGCAGCCCCACCTTCACCCGTGGCCGAAGAGCTCAAGGCCCCATATCCCAACACCGCACAGTCGTCGAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp TGGCGATGGATGGCAGGTCCCTCAGGCTGTCGGAGGTaGTCTCCACACCACTGTCGATGCCCGAGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: WRWMAGPSGCRR*SPHHCRCPSLP
Trigger: TGGGAGGCTCGGGCATCGACAGTGGTGTGGAGAGCACCTCCGACAGCCTGAGGGACCTGCCATCCATCGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp CGGGAGCGGAGGACACCCATCTTGCCGAAGCGGACGTaGAAAGGGGAGCACTGCAGACTGCCATTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: RERRTPILPKRT*KGEHCRLPLGC
Trigger: GCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAAGATGGGTGTCCTCCGCTCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp GAACCAGTGGATGGGGTGTCGCTGGGAGGCAGGCCCTaGGCAGCTGTAGTGGGATCCAGGCACCTGATTCTG +
Preference number: 6 (lower is better)
Translates to: EPVDGVSLGGRP*AAVVGSRHLIL
Trigger: CAGAATCAGGTGCCTGGATCCCACTACAGCTGCCCAGGGCCTGCCTCCCAGCGACACCCCATCCACTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp GGTGAGGGGGAGTCCTCTGGCAATCTACCAGGCTGCTaGGGCTGGGGGACCATTCTCTGTCCGAACTGGGAT +
Preference number: 6 (lower is better)
Translates to: GEGESSGNLPGC*GWGTILCPNWD
Trigger: ATCCCAGTTCGGACAGAGAATGGTCCCCCAGCCCCAGCAGCCTGGTAGATTGCCAGAGGACTCCCCCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221297.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 90 bp ACACCACTGTCGATGCCCGAGCCTCCCACAGACTGTGGTGACTGGTaGGCTGACCTGGCTCCGTTGTCACTGGCTTGTTTGGGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: TPLSMPEPPTDCGDW*ADLAPLSLACLGSP
Trigger: TGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCTCGGGCATCGACAGTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp GCGGCTGCGTGCTCTTCATCACTGGAGGATGACTCATaGTTTATCCTGGTGGCCAGGCCAAGCTGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: AAACSSSLEDDS*FILVARPSWAG
Trigger: GCCTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp AGCCTCCCACAGACTGTGGTGACTGGTTGGCTGACCTaGCTCCGTTGTCACTGGCTTGTTTGGGGAGCCCAC +
Preference number: 6 (lower is better)
Translates to: SLPQTVVTGWLT*LRCHWLVWGAH
Trigger: GTGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp CTGTCGATGCCCGAGCCTCCCACAGACTGTGGTGACTaGTTGGCTGACCTGGCTCCGTTGTCACTGGCTTGT +
Preference number: 6 (lower is better)
Translates to: LSMPEPPTDCGD*LADLAPLSLAC
Trigger: ACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCTCGGGCATCGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp TTGGTGTTGAGGGCCGGGAGCCTGAAGGACTGGGGCTaGGGGACCATTCTCTGTCCGAACTGGGATACGATG +
Preference number: 6 (lower is better)
Translates to: LVLRAGSLKDWG*GTILCPNWDTM
Trigger: CATCGTATCCCAGTTCGGACAGAGAATGGTCCCCCAGCCCCAGTCCTTCAGGCTCCCGGCCCTCAACACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000221230.2
ENSMUST00000222989.2
CDS CAA 90 bp GAGCCTCCCACAGACTGTGGTGACTGGTTGGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGGAGCCCACCAGGATCCCCATTCTTG +
Preference number: 6 (lower is better)
Translates to: EPPTDCGDWLADLAP*SLACLGSPPGSPFL
Trigger: CAAGAATGGGGATCCTGGTGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp CCCACCAGGATCCCCATTCTTGGGGAAATACAGGGCTaGCACTTCAGGGTCCATGTCCGTGAGGTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: PTRIPILGEIQG*HFRVHVREVVQ
Trigger: CTGGACGACCTCACGGACATGGACCCTGAAGTGGCAGCCCTGTATTTCCCCAAGAATGGGGATCCTGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp CAGAGCCGCACGTACGAGCTGATGTTGGTCTTGGCATaGTCCTGCACCAGCTCACCCTTGGGGTTCACAGTG +
Preference number: 6 (lower is better)
Translates to: QSRTYELMLVLA*SCTSSPLGFTV
Trigger: CACTGTGAACCCCAAGGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTCGTACGTGCGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp GTGGTGACTGGTTGGCTGACCTGGCTCCGTTGTCACTaGCTTGTTTGGGGAGCCCACCAGGATCCCCATTCT +
Preference number: 6 (lower is better)
Translates to: VVTGWLTWLRCH*LVWGAHQDPHS
Trigger: AGAATGGGGATCCTGGTGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp CACTTTTTGGTGTTGAGGGCCGGGAGCCTGAAGGACTaGGGCTGGGGGACCATTCTCTGTCCGAACTGGGAT +
Preference number: 6 (lower is better)
Translates to: HFLVLRAGSLKD*GWGTILCPNWD
Trigger: ATCCCAGTTCGGACAGAGAATGGTCCCCCAGCCCCAGTCCTTCAGGCTCCCGGCCCTCAACACCAAAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000221230.2
ENSMUST00000222989.2
CDS CAA 72 bp GAAGGGGAATCTGTCTTGCTCGACGACTGTGCGGTGTaGGGATATGGGGCCTTGAGCTCTTCGGCCACGGGT +
Preference number: 6 (lower is better)
Translates to: EGESVLLDDCAV*GYGALSSSATG
Trigger: ACCCGTGGCCGAAGAGCTCAAGGCCCCATATCCCAACACCGCACAGTCGTCGAGCAAGACAGATTCCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp ACAGACTGTGGTGACTGGTTGGCTGACCTGGCTCCGTaGTCACTGGCTTGTTTGGGGAGCCCACCAGGATCC +
Preference number: 6 (lower is better)
Translates to: TDCGDWLADLAP*SLACLGSPPGS
Trigger: GGATCCTGGTGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp TCGATGCCCGAGCCTCCCACAGACTGTGGTGACTGGTaGGCTGACCTGGCTCCGTTGTCACTGGCTTGTTTG +
Preference number: 6 (lower is better)
Translates to: SMPEPPTDCGDW*ADLAPLSLACL
Trigger: CAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACCAGTCACCACAGTCTGTGGGAGGCTCGGGCATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp ACTTCGCAGAGCCGCACGTACGAGCTGATGTTGGTCTaGGCATGCTCCTGCACCAGCTCACCCTTGGGGTTC +
Preference number: 6 (lower is better)
Translates to: TSQSRTYELMLV*ACSCTSSPLGF
Trigger: GAACCCCAAGGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTCGTACGTGCGGCTCTGCGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp TCGACCACTTCGCAGAGCCGCACGTACGAGCTGATGTaGGTCTTGGCATGCTCCTGCACCAGCTCACCCTTG +
Preference number: 6 (lower is better)
Translates to: STTSQSRTYELM*VLACSCTSSPL
Trigger: CAAGGGTGAGCTGGTGCAGGAGCATGCCAAGACCAACATCAGCTCGTACGTGCGGCTCTGCGAAGTGGTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 90 bp ATCTTGCCGAAGCGGACGTGGAAAGGGGAGCACTGCAGACTGCCATaGGGCTGCCGGATGACAATGATGTCGATGCATCCCGACAGCGTG +
Preference number: 6 (lower is better)
Translates to: ILPKRTWKGEHCRLP*GCRMTMMSMHPDSV
Trigger: CACGCTGTCGGGATGCATCGACATCATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCACGTCCGCTTCGGCAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp CAAACTGCATTTCCGTCTGGGCCTTACTCTGGTGGATaGGCAGTCCCCGGGCCATTGTTGGCGACTGGTCAC +
Preference number: 6 (lower is better)
Translates to: QTAFPSGPYSGG*AVPGPLLATGH
Trigger: GTGACCAGTCGCCAACAATGGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp TGGCTTGGCGGCTGCGTGCTCTTCATCACTGGAGGATaGCTCATGCTTTATCCTGGTGGCCAGGCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: WLGGCVLFITGG*LMLYPGGQAKL
Trigger: CAGCTTGGCCTGGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp GCTGACGTTGGACAAGAGAGAGAGGTGGCTCGAACCTaGTGGCTTGGCGGCTGCGTGCTCTTCATCACTGGA +
Preference number: 6 (lower is better)
Translates to: ADVGQEREVART*WLGGCVLFITG
Trigger: TCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATCAGGTTCGAGCCACCTCTCTCTCTTGTCCAACGTCAGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp ACGTGGAAAGGGGAGCACTGCAGACTGCCATTGGGCTaGCGGATGACAATGATGTCGATGCATCCCGACAGC +
Preference number: 6 (lower is better)
Translates to: TWKGEHCRLPLG*RMTMMSMHPDS
Trigger: GCTGTCGGGATGCATCGACATCATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp TCGAGATCCTCCTCGTTCACAAACTGCATTTCCGTCTaGGCCTTACTCTGGTGGATGAGCAGTCCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: SRSSSFTNCISV*ALLWWMSSPRA
Trigger: GGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTTTGTGAACGAGGAGGATCTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp GGTTGGCTGACCTGGCTCCGTTGTCACTGGCTTGTTTaGGGAGCCCACCAGGATCCCCATTCTTGGGGAAAT +
Preference number: 6 (lower is better)
Translates to: GWLTWLRCHWLV*GAHQDPHSWGN
Trigger: ATTTCCCCAAGAATGGGGATCCTGGTGGGCTCCCCAAACAAGCCAGTGACAACGGAGCCAGGTCAGCCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp GATGACTCATGCTTTATCCTGGTGGCCAGGCCAAGCTaGGCAGGCTGCTCTCCGGTATTGTGGCCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: DDSCFILVARPS*AGCSPVLWPFP
Trigger: TGGGAAAGGCCACAATACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATGAGTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp AAGCGGACGTGGAAAGGGGAGCACTGCAGACTGCCATaGGGCTGCCGGATGACAATGATGTCGATGCATCCC +
Preference number: 6 (lower is better)
Translates to: KRTWKGEHCRLP*GCRMTMMSMHP
Trigger: GGGATGCATCGACATCATTGTCATCCGGCAGCCCAATGGCAGTCTGCAGTGCTCCCCTTTCCACGTCCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 90 bp TGTTTGAAGGCCACACACTTCGGATCCACCCGGGGTCTCGCATCATaGGAATCCATGACCATGCCGAGTCGAGGGAGCTCTTGTCTCGTG +
Preference number: 6 (lower is better)
Translates to: CLKATHFGSTRGLAS*ESMTMPSRGSSCLV
Trigger: CACGAGACAAGAGCTCCCTCGACTCGGCATGGTCATGGATTCCAATGATGCGAGACCCCGGGTGGATCCGAAGTGTGTGGCCTTCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000238839.2
CDS CCA 72 bp GTTGAGGGCCGGGAGCCTGAAGGACTTTCCGAAGCATaGAAGTGGCAAGACTGCAGAGGACAAGAGCTAGAG +
Preference number: 6 (lower is better)
Translates to: VEGREPEGLSEA*KWQDCRGQELE
Trigger: CTCTAGCTCTTGTCCTCTGCAGTCTTGCCACTTCCATGCTTCGGAAAGTCCTTCAGGCTCCCGGCCCTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221297.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp TCGTTCACAAACTGCATTTCCGTCTGGGCCTTACTCTaGTGGATGAGCAGTCCCCGGGCCATTGTTGGCGAC +
Preference number: 6 (lower is better)
Translates to: SFTNCISVWALL*WMSSPRAIVGD
Trigger: GTCGCCAACAATGGCCCGGGGACTGCTCATCCACCAGAGTAAGGCCCAGACGGAAATGCAGTTTGTGAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp CTTCATCACTGGAGGATGACTCATGCTTTATCCTGGTaGCCAGGCCAAGCTGGGCAGGCTGCTCTCCGGTAT +
Preference number: 6 (lower is better)
Translates to: LHHWRMTHALSW*PGQAGQAALRY
Trigger: ATACCGGAGAGCAGCCTGCCCAGCTTGGCCTGGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp AACCTGATGGCTTGGCGGCTGCGTGCTCTTCATCACTaGAGGATGACTCATGCTTTATCCTGGTGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: NLMAWRLRALHH*RMTHALSWWPG
Trigger: GCCTGGCCACCAGGATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp TGGACAAGAGAGAGAGGTGGCTCGAACCTGATGGCTTaGCGGCTGCGTGCTCTTCATCACTGGAGGATGACT +
Preference number: 6 (lower is better)
Translates to: WTRERGGSNLMA*RLRALHHWRMT
Trigger: AGTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATCAGGTTCGAGCCACCTCTCTCTCTTGTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp TTGGACAAGAGAGAGAGGTGGCTCGAACCTGATGGCTaGGCGGCTGCGTGCTCTTCATCACTGGAGGATGAC +
Preference number: 6 (lower is better)
Translates to: LDKRERWLEPDG*AAACSSSLEDD
Trigger: GTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATCAGGTTCGAGCCACCTCTCTCTCTTGTCCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp GAGAGGTGGCTCGAACCTGATGGCTTGGCGGCTGCGTaGTCTTCATCACTGGAGGATGACTCATGCTTTATC +
Preference number: 6 (lower is better)
Translates to: ERWLEPDGLAAA*SSSLEDDSCFI
Trigger: GATAAAGCATGAGTCATCCTCCAGTGATGAAGAGCACGCAGCCGCCAAGCCATCAGGTTCGAGCCACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 90 bp AGGTGTCGGCTCCGTTTATCTTTCTTCCTGGAAGGGGAATCTGTCTaGCTCGACGACTGTGCGGTGTTGGGATATGGGGCCTTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: RCRLRLSFFLEGESV*LDDCAVLGYGALSS
Trigger: AGAGCTCAAGGCCCCATATCCCAACACCGCACAGTCGTCGAGCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAACGGAGCCGACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp GGAAATACAGGGCTGCCACTTCAGGGTCCATGTCCGTaGGGTCGTCCAGATAAACACCATCAGCTCCAAGGT +
Preference number: 6 (lower is better)
Translates to: GNTGLPLQGPCP*GRPDKHHQLQG
Trigger: ACCTTGGAGCTGATGGTGTTTATCTGGACGACCTCACGGACATGGACCCTGAAGTGGCAGCCCTGTATTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp CATGCTCCTGCACCAGCTCACCCTTGGGGTTCACAGTaGAGATCCTATTCAGGGACACTCCCACTTGCTTGT +
Preference number: 6 (lower is better)
Translates to: HAPAPAHPWGSQ*RSYSGTLPLAC
Trigger: ACAAGCAAGTGGGAGTGTCCCTGAATAGGATCTTCACTGTGAACCCCAAGGGTGAGCTGGTGCAGGAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp TCACAGGAATGGCTTCTCTTTAGCAATGGGAAGACGTaGTCGACCACTTCGCAGAGCCGCACGTACGAGCTG +
Preference number: 6 (lower is better)
Translates to: SQEWLLFSNGKT*STTSQSRTYEL
Trigger: CAGCTCGTACGTGCGGCTCTGCGAAGTGGTCGATCACGTCTTCCCATTGCTAAAGAGAAGCCATTCCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp GGCTGGACTCTTTCATCTTGTGTGGAGAAGAGGACTTaGCAGCCTGTGGCAATTCACCCCACAGCCAGAGCA +
Preference number: 6 (lower is better)
Translates to: GWTLSSCVEKRT*QPVAIHPTARA
Trigger: TGCTCTGGCTGTGGGGTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp CTCCGTTTATCTTTCTTCCTGGAAGGGGAATCTGTCTaGCTCGACGACTGTGCGGTGTTGGGATATGGGGCC +
Preference number: 6 (lower is better)
Translates to: LRLSFFLEGESV*LDDCAVLGYGA
Trigger: GGCCCCATATCCCAACACCGCACAGTCGTCGAGCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAACGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp ATTGGAATCCATGACCATGCCGAGTCGAGGGAGCTCTaGTCTCGTGATGCCTCCCACTTGGAGCTACAGACA +
Preference number: 6 (lower is better)
Translates to: IGIHDHAESREL*SRDASHLELQT
Trigger: TGTCTGTAGCTCCAAGTGGGAGGCATCACGAGACAAGAGCTCCCTCGACTCGGCATGGTCATGGATTCCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000238839.2
CDS GCA 72 bp GCTGGACTCTTTCATCTTGTGTGGAGAAGAGGACTTTaGAGCCTGTGGCAATTCACCCCACAGCCAGAGCAT +
Preference number: 6 (lower is better)
Translates to: AGLFHLVWRRGL*SLWQFTPQPEH
Trigger: ATGCTCTGGCTGTGGGGTGAATTGCCACAGGCTGCAAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp TCCGTTTATCTTTCTTCCTGGAAGGGGAATCTGTCTTaGTCGACGACTGTGCGGTGTTGGGATATGGGGCCT +
Preference number: 6 (lower is better)
Translates to: SVYLSSWKGNLS*STTVRCWDMGP
Trigger: AGGCCCCATATCCCAACACCGCACAGTCGTCGAGCAAGACAGATTCCCCTTCCAGGAAGAAAGATAAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp AGCCATTCTGGCTTACTTTGTGGTACAGCTTTGCAATaGCCTGGTGAGTCCAATCCTTTCCCAGCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: SHSGLLCGTALQ*PGESNPFPAWA
Trigger: TGCCCACGCTGGGAAAGGATTGGACTCACCAGGGCATTGCAAAGCTGTACCACAAAGTAAGCCAGAATGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp AGGCACCTGATTCTGTCTACAGAGTTCCTCTTCAGCTaGCTTTCCATTCTCGCAGCTCCTTCTGACAGGATG +
Preference number: 6 (lower is better)
Translates to: RHLILSTEFLFS*LSILAAPSDRM
Trigger: CATCCTGTCAGAAGGAGCTGCGAGAATGGAAAGCCAGCTGAAGAGGAACTCTGTAGACAGAATCAGGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221146.2
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp TTCACCCCACAGCCAGAGCATTTCCAGGTTATTCTTTaGCGTCAACCTGTCTGCAGACTTACTGACCAGCTC +
Preference number: 6 (lower is better)
Translates to: FTPQPEHFQVIL*RQPVCRLTDQL
Trigger: GAGCTGGTCAGTAAGTCTGCAGACAGGTTGACGCCAAAGAATAACCTGGAAATGCTCTGGCTGTGGGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp ATGATGGATTCCACAGTGGCCTTTGGCAAAGGTTTCTaGAAAGCCTGCATCGCCAGAAGTAGAGGAGCTGCT +
Preference number: 6 (lower is better)
Translates to: MMDSTVAFGKGF*KACIARSRGAA
Trigger: AGCAGCTCCTCTACTTCTGGCGATGCAGGCTTTCCAGAAACCTTTGCCAAAGGCCACTGTGGAATCCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
CDS CAA 72 bp GTTCACAGTGAAGATCCTATTCAGGGACACTCCCACTaGCTTGTAGGAATACACATCAGCAGGCCGGTTCCC +
Preference number: 6 (lower is better)
Translates to: VHSEDPIQGHSH*LVGIHISRPVP
Trigger: GGGAACCGGCCTGCTGATGTGTATTCCTACAAGCAAGTGGGAGTGTCCCTGAATAGGATCTTCACTGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp GGTTATTCTTTGGCGTCAACCTGTCTGCAGACTTACTaGCCAGCTCAGAGTCACTTTTTGGTGTTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: GYSLASTCLQTY*PAQSHFLVLRA
Trigger: GGCCCTCAACACCAAAAAGTGACTCTGAGCTGGTCAGTAAGTCTGCAGACAGGTTGACGCCAAAGAATAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp TCCCAGTCAGGCACTGTTCAGGCTTGCTTTCCTCTTTaGTTGTGGCATTTCTTCCTCTCCAGGAAAACCACC +
Preference number: 6 (lower is better)
Translates to: SQSGTVQACFPL*LWHFFLSRKTT
Trigger: GGTGGTTTTCCTGGAGAGGAAGAAATGCCACAATCAAAGAGGAAAGCAAGCCTGAACAGTGCCTGACTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp TCATTTTATCAGGAGTCTTCCGGCTCCCTAAGGGGCTaGACTCTTTCATCTTGTGTGGAGAAGAGGACTTTG +
Preference number: 6 (lower is better)
Translates to: SFYQESSGSLRG*TLSSCVEKRTL
Trigger: CAAAGTCCTCTTCTCCACACAAGATGAAAGAGTCCAGCCCCTTAGGGAGCCGGAAGACTCCTGATAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS GCA 72 bp TACATCATTAGGAAGAGTTCTGCTTCCATCCATCGGTaGTGTGTCCTCATCCGAGCTCATCTCTATGGGAAA +
Preference number: 6 (lower is better)
Translates to: YIIRKSSASIHR*CVLIRAHLYGK
Trigger: TTTCCCATAGAGATGAGCTCGGATGAGGACACAGCACCGATGGATGGAAGCAGAACTCTTCCTAATGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp CCGGGCCATTGTTGGCGACTGGTCACTAAAAGTATCTaGAGACTCGCTGTGAATGGCCTGAAAATTCATTTT +
Preference number: 6 (lower is better)
Translates to: PGHCWRLVTKSI*RLAVNGLKIHF
Trigger: AAAATGAATTTTCAGGCCATTCACAGCGAGTCTTCAGATACTTTTAGTGACCAGTCGCCAACAATGGCCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp GGGTCATCGATGATAGCAGGGTTGTCGGCAAATTGCTaGTATGACACGGCTTGTTCCAAAAATGCATCTTTG +
Preference number: 6 (lower is better)
Translates to: GSSMIAGLSANC*YDTACSKNASL
Trigger: CAAAGATGCATTTTTGGAACAAGCCGTGTCATATCAGCAATTTGCCGACAACCCTGCTATCATCGATGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS TCA 72 bp ATCGATGATAGCAGGGTTGTCGGCAAATTGCTGATATaGCACGGCTTGTTCCAAAAATGCATCTTTGGTGAT +
Preference number: 6 (lower is better)
Translates to: IDDSRVVGKLLI*HGLFQKCIFGD
Trigger: ATCACCAAAGATGCATTTTTGGAACAAGCCGTGTCATATCAGCAATTTGCCGACAACCCTGCTATCATCGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp CGAGGGGAAGTTTTCCTTAGGAATATCATCTTGGAATaGTGGTACATCATTAGGAAGAGTTCTGCTTCCATC +
Preference number: 6 (lower is better)
Translates to: RGEVFLRNIILE*WYIIRKSSASI
Trigger: GATGGAAGCAGAACTCTTCCTAATGATGTACCACCATTCCAAGATGATATTCCTAAGGAAAACTTCCCCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CAA 72 bp ATCTCTATGGGAAACATGTCCTCATCCTCAGATGTGTaGACATTGTCATCTCTTTTGAGATTGTCCAACTGG +
Preference number: 6 (lower is better)
Translates to: ISMGNMSSSSDV*TLSSLLRLSNW
Trigger: CCAGTTGGACAATCTCAAAAGAGATGACAATGTCAACACATCTGAGGATGAGGACATGTTTCCCATAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2
CDS CCA 72 bp GAAATCGAGGGGAAGTTTTCCTTAGGAATATCATCTTaGAATGGTGGTACATCATTAGGAAGAGTTCTGCTT +
Preference number: 6 (lower is better)
Translates to: EIEGKFSLGISS*NGGTSLGRVLL
Trigger: AAGCAGAACTCTTCCTAATGATGTACCACCATTCCAAGATGATATTCCTAAGGAAAACTTCCCCTCGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000067124.6
ENSMUST00000111067.10
ENSMUST00000221230.2
ENSMUST00000221297.2
ENSMUST00000222989.2
ENSMUST00000238839.2
ENSMUST00000239165.2