Pregenerated sensors for LPGAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026623Ensembl transcript IDs: ENSMUST00000110855.8, ENSMUST00000110856.8
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTaGAGTGAGGTGAGCTGTCGCTTGGTCCCACCTGTCGCCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: PPLLTGFSVIAHSPF*SEVSCRLVPPVAQP Trigger: AGGCTGGGCGACAGGTGGGACCAAGCGACAGCTCACCTCACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | GAGGGAGGGGATCCAGCTACCAGAACGGGAGTGGGTTCAGGGAGGTaGCCGATGGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACA | + |
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Preference number: 1 (lower is better) Translates to: EGGDPATRTGVGSGR*PMEVVLEHHGQAQT Trigger: TGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGCCACCTCCCTGAACCCACTCCCGTTCTGGTAGCTGGATCCCCTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR TCA 90 bp | CACAGAGAATGCCAACGCTGCACCTTAGCCAGGGTTGCTAGATGGTaGGGCCACTCCTCAGGATGTGCCCACCAGCTCTCCAGGCTACCA | + |
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Preference number: 1 (lower is better) Translates to: HRECQRCTLARVARW*GHSSGCAHQLSRLP Trigger: TGGTAGCCTGGAGAGCTGGTGGGCACATCCTGAGGAGTGGCCTCACCATCTAGCAACCCTGGCTAAGGTGCAGCGTTGGCATTCTCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR TCA 90 bp | TCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTGAAGTaGGGTGAGCTGTCGCTTGGTCCCACCTGTCGCCCAGCCTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SAHRLLCHRTQPFLK*GELSLGPTCRPACV Trigger: CACACAGGCTGGGCGACAGGTGGGACCAAGCGACAGCTCACCTCACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR TCA 90 bp | GAGCTGCTGTCTCCAGGTCCTGCCACCCTGAGAGAGGCAGCTGCTTaGCATAATGACAGAACATACAGACCCCAGGGCCCACAAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: ELLSPGPATLREAAA*HNDRTYRPQGPQEA Trigger: GGCTTCTTGTGGGCCCTGGGGTCTGTATGTTCTGTCATTATGTCAAGCAGCTGCCTCTCTCAGGGTGGCAGGACCTGGAGACAGCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR GCA 90 bp | CCTGCTTCCTCTGCTCACAGGCGTTCTTGCTGTTCCTGCCTCCTCTaGTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: PASSAHRRSCCSCLL*SQASLSSHTALSEV Trigger: CACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR GCA 90 bp | CTTGCTGTTCCTGCTTCCTCTGCTCACAGGCGTTCTTGCTGTTCCTaGCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LAVPASSAHRRSCCS*LLCSQASLSSHTAL Trigger: AAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGGAACAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | GACTGGAGGAAGGAGCAAGCCTTTGTAAGCAAAGAAGGAACCGGGTaGTTTTCCTCACCGGTCATGAATGCCGAGCTCTGGGCACGTGCC | + |
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Preference number: 1 (lower is better) Translates to: DWRKEQAFVSKEGTG*FSSPVMNAELWARA Trigger: GGCACGTGCCCAGAGCTCGGCATTCATGACCGGTGAGGAAAACCACCCGGTTCCTTCTTTGCTTACAAAGGCTTGCTCCTTCCTCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR GCA 90 bp | CATTCCGTTCTTGCTGTTCCTGCTTCCTCTGCTCACAGGCGTTCTTaGTGTTCCTGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCAC | + |
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Preference number: 1 (lower is better) Translates to: HSVLAVPASSAHRRS*CSCLLCSQASLSSH Trigger: GTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGGAACAGCAAGAACGGAATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR TCA 90 bp | GTAGTCTCAGAGCCCACTTTGAGATTACTGAGAGCTGGTGCAACATaGCATCAACCAGCACCAGCCAGTGGCTGCTTCAGAGCACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VVSEPTLRLLRAGAT*HQPAPASGCFRAPQ Trigger: CTGGGGTGCTCTGAAGCAGCCACTGGCTGGTGCTGGTTGATGTCATGTTGCACCAGCTCTCAGTAATCTCAAAGTGGGCTCTGAGACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR TCA 90 bp | CTCAGGATGTGCCCACCAGCTCTCCAGGCTACCAGTACCTCAGCATaGAGGGTAGACACATTAATGTTGTGGCGCTCTGTCCTAGGAAAG | + |
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Preference number: 1 (lower is better) Translates to: LRMCPPALQATSTSA*RVDTLMLWRSVLGK Trigger: CTTTCCTAGGACAGAGCGCCACAACATTAATGTGTCTACCCTTCATGCTGAGGTACTGGTAGCCTGGAGAGCTGGTGGGCACATCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR GCA 90 bp | CCGGGAACTAGCACACCTGCTACACAGTCTCATCTGCCTCTCTCTTaGCTGCTGATAGCTATAAGGCCCAGAGCACTTGGAGGGCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: PGTSTPATQSHLPLS*LLIAIRPRALGGQN Trigger: ATTTTGCCCTCCAAGTGCTCTGGGCCTTATAGCTATCAGCAGGCAAGAGAGAGGCAGATGAGACTGTGTAGCAGGTGTGCTAGTTCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR GCA 90 bp | TTATCTGTTCAAGTTTCATTCCGTTCTTGCTGTTCCTGCTTCCTCTaGTCACAGGCGTTCTTGCTGTTCCTGCCTCCTCTGCTCACAGGC | + |
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Preference number: 1 (lower is better) Translates to: LSVQVSFRSCCSCFL*SQAFLLFLPPLLTG Trigger: GCCTGTGAGCAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGGAACAGCAAGAACGGAATGAAACTTGAACAGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | TCAACAGAGGCACTGCGTAGCTTCTCTCTGGCTTCCCCTCGTTTCTaGATTGAGACTGCTTTCCCTTATTCACTGTCCCTGCTAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: STEALRSFSLASPRF*IETAFPYSLSLLTR Trigger: TCTGGTTAGCAGGGACAGTGAATAAGGGAAAGCAGTCTCAATCCAGAAACGAGGGGAAGCCAGAGAGAAGCTACGCAGTGCCTCTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | ATTACTGAGAGCTGGTGCAACATGACATCAACCAGCACCAGCCAGTaGCTGCTTCAGAGCACCCCAGGCTCTTATGTGATCCAGAAATTC | + |
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Preference number: 1 (lower is better) Translates to: ITESWCNMTSTSTSQ*LLQSTPGSYVIQKF Trigger: GAATTTCTGGATCACATAAGAGCCTGGGGTGCTCTGAAGCAGCCACTGGCTGGTGCTGGTTGATGTCATGTTGCACCAGCTCTCAGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | AACTTGCAGAGTAGTCTCAGAGCCCACTTTGAGATTACTGAGAGCTaGTGCAACATGACATCAACCAGCACCAGCCAGTGGCTGCTTCAG | + |
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Preference number: 1 (lower is better) Translates to: NLQSSLRAHFEITES*CNMTSTSTSQWLLQ Trigger: CTGAAGCAGCCACTGGCTGGTGCTGGTTGATGTCATGTTGCACCAGCTCTCAGTAATCTCAAAGTGGGCTCTGAGACTACTCTGCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR GCA 90 bp | ACAGGAAAGCCTCCTGGGAGCCTGCTCACGGATGAGGCTTCCCTTTaGTTCAGGCTAGGTTACTATCCTTTGCTATATTTGCATCTGATA | + |
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Preference number: 1 (lower is better) Translates to: TGKPPGSLLTDEASL*FRLGYYPLLYLHLI Trigger: TATCAGATGCAAATATAGCAAAGGATAGTAACCTAGCCTGAAGCAAAGGGAAGCCTCATCCGTGAGCAGGCTCCCAGGAGGCTTTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR GCA 90 bp | GACTCTACCTCTGGGACAATTACAGCTGCACCAACTTTTGTCTTTTaGAGTCCTCAGGTTAAGCCCGCTGGCTTTGGTGTTTCTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: DSTSGTITAAPTFVF*SPQVKPAGFGVSPL Trigger: AAGAGGAGAAACACCAAAGCCAGCGGGCTTAACCTGAGGACTGCAAAAGACAAAAGTTGGTGCAGCTGTAATTGTCCCAGAGGTAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | ACGATGAACAGAAACTTGCTTGGCTTTGCCCTCTTAGAAGACGACTaGAAGAGACTGGGAAGTGTTTTTGAGCTGCTGTCTCCAGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: TMNRNLLGFALLEDD*KRLGSVFELLSPGP Trigger: AGGACCTGGAGACAGCAGCTCAAAAACACTTCCCAGTCTCTTCCAGTCGTCTTCTAAGAGGGCAAAGCCAAGCAAGTTTCTGTTCATCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CCA 90 bp | TCTGCCTCTCTCTTGCCTGCTGATAGCTATAAGGCCCAGAGCACTTaGAGGGCAAAATTCCCATCAAAGGCCATTACCATTCATCCTTTT | + |
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Preference number: 1 (lower is better) Translates to: SASLLPADSYKAQST*RAKFPSKAITIHPF Trigger: AAAAGGATGAATGGTAATGGCCTTTGATGGGAATTTTGCCCTCCAAGTGCTCTGGGCCTTATAGCTATCAGCAGGCAAGAGAGAGGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | CTCTCTTCTGTACGTGCTTGGGGTTTGCTAAAGATGAAGCTACTATaGGCTTTTATTTGGTGTTGGTCAACTGTTCCTGTACAACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LSSVRAWGLLKMKLL*AFIWCWSTVPVQLG Trigger: CCCCAGTTGTACAGGAACAGTTGACCAACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTACAGAAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR GCA 90 bp | TTCCCTAGTATAAGCAGGTGGACTCCAGCTATGACAAGGAAGCACTaGCAATACTCTCAACAAACATGTCTGATTGTTTGTACACAGAAG | + |
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Preference number: 1 (lower is better) Translates to: FPSISRWTPAMTRKH*QYSQQTCLIVCTQK Trigger: CTTCTGTGTACAAACAATCAGACATGTTTGTTGAGAGTATTGGCAGTGCTTCCTTGTCATAGCTGGAGTCCACCTGCTTATACTAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | AGGACAAATCTTTCAAAAGGTTTCTACGATGAACAGAAACTTGCTTaGCTTTGCCCTCTTAGAAGACGACTGGAAGAGACTGGGAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: RTNLSKGFYDEQKLA*LCPLRRRLEETGKC Trigger: ACACTTCCCAGTCTCTTCCAGTCGTCTTCTAAGAGGGCAAAGCCAAGCAAGTTTCTGTTCATCGTAGAAACCTTTTGAAAGATTTGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CCA 90 bp | ACCAGTGAGGTATTTCAGGTAACGTCTCTCTCTTCTGTACGTGCTTaGGGTTTGCTAAAGATGAAGCTACTATGGGCTTTTATTTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: TSEVFQVTSLSSVRA*GLLKMKLLWAFIWC Trigger: ACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTACAGAAGAGAGAGACGTTACCTGAAATACCTCACTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | AGAACACCTATTTATTCTCTCTTCCAGTTCCCTAGTATAAGCAGGTaGACTCCAGCTATGACAAGGAAGCACTGCCAATACTCTCAACAA | + |
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Preference number: 1 (lower is better) Translates to: RTPIYSLFQFPSISR*TPAMTRKHCQYSQQ Trigger: TTGTTGAGAGTATTGGCAGTGCTTCCTTGTCATAGCTGGAGTCCACCTGCTTATACTAGGGAACTGGAAGAGAGAATAAATAGGTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CCA 90 bp | CAATCAATAACTTCCTTGCATCCCACTTTCCACACTAAATACAAATaGGGAGTTCTATCCAGCTCTCTACAATGGCATTGTGTGGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: QSITSLHPTFHTKYK*GVLSSSLQWHCVAS Trigger: GGAAGCCACACAATGCCATTGTAGAGAGCTGGATAGAACTCCCCATTTGTATTTAGTGTGGAAAGTGGGATGCAAGGAAGTTATTGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR TCA 90 bp | CTTTCCGAGTCTTCTAGGATTTTATCATTTCCTCTTCTCCCAGTGTaGTGCTTGCGTAAATGTATGGTAGAGTGTATCTCTTTAAAACAC | + |
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Preference number: 1 (lower is better) Translates to: LSESSRILSFPLLPV*CLRKCMVECISLKH Trigger: GTGTTTTAAAGAGATACACTCTACCATACATTTACGCAAGCATCACACTGGGAGAAGAGGAAATGATAAAATCCTAGAAGACTCGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CCA 90 bp | TATCAGGGCATAATGCTAGCAATCATGGTTGATATTGTCACAGGTTaGCTCCGAGGGTTCAGCAATGATAATTATATTGTAAGGATCAAT | + |
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Preference number: 1 (lower is better) Translates to: YQGIMLAIMVDIVTG*LRGFSNDNYIVRIN Trigger: ATTGATCCTTACAATATAATTATCATTGCTGAACCCTCGGAGCCAACCTGTGACAATATCAACCATGATTGCTAGCATTATGCCCTGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCTGGGAGCCACTCCTCAGGATGTaGCCACCAGCTCTCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: GGGTRASWASTDRKASWEPLLRM*PPALQA Trigger: AGCCTGGAGAGCTGGTGGGCACATCCTGAGGAGTGG...CTCCCAGGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR-3UTR GCA 90 bp | TCGGGGAAGAGGGCTGGTCAGCAACAGATCTCAAAACGCTTCAAGTCTGCTTCCGCTGTCTCCAGGTCCTaGCACCCTGAGAGAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SGKRAGQQQISKRFKSASAVSRS*HPERGS Trigger: GCTGCCTCTCTCAGGGTGGCAGGACCTGGAGACAGC...GGAAGCAGACTTGAAGCGTTTTGAGATCTGTTGCTGACCAGCCCTCTTCCCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR GCA 90 bp | ATGATATCAAAATCAGAGGGAGGGGATCCAGCTACCAGAACGGGAGTGGGTTCAAGCCTCCTGGGAGCCTaGTCACGGATGAGGCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: MISKSEGGDPATRTGVGSSLLGA*SRMRLP Trigger: GGGAAGCCTCATCCGTGAGCAGGCTCCCAGGAGGCT...TGAACCCACTCCCGTTCTGGTAGCTGGATCCCCTCCCTCTGATTTTGATATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTGAAGTGGAGGGCAAAAAGAGCTaGAGTCCTAAAGGACGCCGG | + |
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Preference number: 2 (lower is better) Translates to: CLLCSQASLSSHTALSEVEGKKS*SPKGRR Trigger: CCGGCGTCCTTTAGGACTGCAGCTCTTTTTGCCCTC...CACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR CCA 90 bp | TCGGGGAAGAGGGCTGGTCAGCAACAGATCTCAAAACGCTTCAAGTCTGCTTCCATGAATGCCGAGCTCTaGGCACGTGCCACAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SGKRAGQQQISKRFKSASMNAEL*ARATAV Trigger: CACTGCTGTGGCACGTGCCCAGAGCTCGGCATTCAT...GGAAGCAGACTTGAAGCGTTTTGAGATCTGTTGCTGACCAGCCCTCTTCCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CAA 90 bp | TCATTCCGTTCTTGCTGTTCCTGCTTCCTCTGCTCACAGGCGTTCTaGCTGTTCCTGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCA | + |
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Preference number: 2 (lower is better) Translates to: SFRSCCSCFLCSQAF*LFLPPLLTGFSVIA Trigger: TGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGGAACAGCAAGAACGGAATGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR TCA 90 bp | TACTTAACTGTCATGTTCCTCTGGAGCACAGCAGTGGTAAAAGTGGGCCAGTCACAGGTCCTGCCACCCTaGGAGAGGCAGCTGCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: YLTVMFLWSTAVVKVGQSQVLPP*ERQLLD Trigger: GTCAAGCAGCTGCCTCTCTCAGGGTGGCAGGACCTG...TGACTGGCCCACTTTTACCACTGCTGTGCTCCAGAGGAACATGACAGTTAAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR TCA 90 bp | CACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCAGCTTTCCTCACCGGTCATaGATGCCGAGCTCTGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: HIKYCRGEIKPQPHPTSSFPHRS*MPSSGH Trigger: GTGCCCAGAGCTCGGCATTCATGACCGGTGAGGAAA...GCTGCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTGAAGTGGCCTGTGGCTTGCTTTaGAATGAGGAAATGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: CLLCSQASLSSHTALSEVACGLL*NEEMGL Trigger: CAGACCCATTTCCTCATTGCAAAGCAAGCCACAGGC...CACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR CCA 90 bp | TCGGGGAAGAGGGCTGGTCAGCAACAGATCTCAAAACGCTTCAAGTCTGCTTCCCACAGTGATGTCATGTaGACAGTGGACACTGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SGKRAGQQQISKRFKSASHSDVM*TVDTAP Trigger: GGGAGCAGTGTCCACTGTCCACATGACATCACTGTG...GGAAGCAGACTTGAAGCGTTTTGAGATCTGTTGCTGACCAGCCCTCTTCCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAAAGCCTCCTGGGAGCCTGCTCACGGATGAGGCTTCCCTTTGCTTCAGGATACAAAAGAGAAAGTaGGTGCTCTCCTCTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TGKPPGSLLTDEASLCFRIQKRK*VLSSAE Trigger: CTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTAT...CCTGAAGCAAAGGGAAGCCTCATCCGTGAGCAGGCTCCCAGGAGGCTTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTAGTCTCTACCCTCATGCCGGGAACTAGCACACCTGCTACACAGTCTCATTCCACAAGGCGTGAGTaGGAGAGCATCCTCAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: TLVSTLMPGTSTPATQSHSTRRE*ESILSN Trigger: GTTGCTGAGGATGCTCTCTCACTCACGCCTTGTGGA...ATGAGACTGTGTAGCAGGTGTGCTAGTTCCCGGCATGAGGGTAGAGACTAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR GCA 90 bp | ATGATATCAAAATCAGAGGGAGGGGATCCAGCTACCAGAACGGGAGTGGGTTCAGTGGACAGTGGACACTaGTCCCCACAGAGAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: MISKSEGGDPATRTGVGSVDSGH*SPQRMP Trigger: TGGCATTCTCTGTGGGGAGCAGTGTCCACTGTCCAC...TGAACCCACTCCCGTTCTGGTAGCTGGATCCCCTCCCTCTGATTTTGATATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCCGGTGTAAACTGGCATaGCTTTGCTTACCTCCCCCT | + |
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Preference number: 2 (lower is better) Translates to: SHIKYCRGEIKPQPHPTSRCKLA*LCLPPP Trigger: AGGGGGAGGTAAGCAAAGCCATGCCAGTTTACACCG...GCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR GCA 90 bp | CACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCAGCGAAGTGTTTTTGAGCTaGTGTCTCCAGGTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HIKYCRGEIKPQPHPTSSEVFLS*CLQVLP Trigger: TGGCAGGACCTGGAGACAGCAGCTCAAAAACACTTC...GCTGCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR CCA 90 bp | ATGATATCAAAATCAGAGGGAGGGGATCCAGCTACCAGAACGGGAGTGGGTTCACACAGTGATGTCATGTaGACAGTGGACACTGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: MISKSEGGDPATRTGVGSHSDVM*TVDTAP Trigger: GGGAGCAGTGTCCACTGTCCACATGACATCACTGTG...TGAACCCACTCCCGTTCTGGTAGCTGGATCCCCTCCCTCTGATTTTGATATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR-3UTR TCA 90 bp | CACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCAGCTTTCAAGGGACACAGTaGTGTCATGTGGACAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: HIKYCRGEIKPQPHPTSSFQGTQ*CHVDSG Trigger: TCCACTGTCCACATGACATCACTGTGTCCCTTGAAA...GCTGCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCTTAGGACTCTACCTCTaGGACAATTACAGCTGCACC | + |
|
Preference number: 2 (lower is better) Translates to: SHIKYCRGEIKPQPHPTSLGLYL*DNYSCT Trigger: GGTGCAGCTGTAATTGTCCCAGAGGTAGAGTCCTAA...GCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTTGGAGGGCAAAATTCCCATCAAAGGCCATTACCATTCATCCTTTTGAACCAGAGCCTGCTCACGGATaGGGCTTCCCTTTGCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TWRAKFPSKAITIHPFEPEPAHG*GFPLLQ Trigger: CTGAAGCAAAGGGAAGCCTCATCCGTGAGCAGGCTC...TGGTTCAAAAGGATGAATGGTAATGGCCTTTGATGGGAATTTTGCCCTCCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR TCA 90 bp | CACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCAGCGCTAGCAATCATGGTTaGTATTGTCACAGGTTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HIKYCRGEIKPQPHPTSSASNHG*YCHRLA Trigger: AGCCAACCTGTGACAATATCAACCATGATTGCTAGC...GCTGCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTTCTATACAAAAGAGAAAGTGGGTGCTCTCCTCTGCTGAGGGAAAGCACTAGAGAATGCCAACGCTaGACCTTAGCCAGGGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CFLYKRESGCSPLLRESTRECQR*TLARVA Trigger: AGCAACCCTGGCTAAGGTGCAGCGTTGGCATTCTCT...AGTGCTTTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTATAGAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACAATGGCTTTCCCCAGACTCTCGGGGAAGAGGGCTGGTCAGCAACAGATCTCTCAGATGGAATTTCTaGAGAAAACTCCACAGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KQWLSPDSRGRGLVSNRSLRWNF*RKLHSA Trigger: TGCACTGTGGAGTTTTCTGCAGAAATTCCATCTGAG...AGATCTGTTGCTGACCAGCCCTCTTCCCCGAGAGTCTGGGGAAAGCCATTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTGTTCCTGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTAAGATGAAGCTACTATaGGCTTTTATTTGGTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLFLPPLLTGFSVIAHSPKMKLL*AFIWCW Trigger: CCAACACCAAATAAAAGCCCATAGTAGCTTCATCTT...AGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCGACTTAATACAATCAATAACTTCCTTGCATCCCACTTTCCACACTAAATACCCACTCCTCAGGATGTaGCCACCAGCTCTCCAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PDLIQSITSLHPTFHTKYPLLRM*PPALQA Trigger: AGCCTGGAGAGCTGGTGGGCACATCCTGAGGAGTGG...GTATTTAGTGTGGAAAGTGGGATGCAAGGAAGTTATTGATTGTATTAAGTCGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTAGCTTCTCTCTGGCTTCCCCTCGTTTCTGGATTGAGACTGCTTTCCCTTATCTCTTAGAAGACGACTaGAAGAGACTGGGAAGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: RSFSLASPRFWIETAFPYLLEDD*KRLGSV Trigger: AACACTTCCCAGTCTCTTCCAGTCGTCTTCTAAGAG...ATAAGGGAAAGCAGTCTCAATCCAGAAACGAGGGGAAGCCAGAGAGAAGCTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTTCTATACAAAAGAGAAAGTGGGTGCTCTCCTCTGCTGAGGGAAAGCACTTTTCAAGGGACACAGTaGTGTCATGTGGACAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: CFLYKRESGCSPLLRESTFQGTQ*CHVDSG Trigger: TCCACTGTCCACATGACATCACTGTGTCCCTTGAAA...AGTGCTTTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTATAGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGGGGAAGAGGGCTGGTCAGCAACAGATCTCAAAACGCTTCAAGTCTGCTTCCATGGCAACTTTTGAGTaGTATCCTGTGTTCATTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SGKRAGQQQISKRFKSASMATFE*YPVFIV Trigger: AACAATGAACACAGGATATCACTCAAAAGTTGCCAT...GGAAGCAGACTTGAAGCGTTTTGAGATCTGTTGCTGACCAGCCCTCTTCCCCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACAATGGCTTTCCCCAGACTCTCGGGGAAGAGGGCTGGTCAGCAACAGATCTCTTGTCTCTAAGAGCTaGTCATTTAATTCTAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: KQWLSPDSRGRGLVSNRSLVSKS*SFNSRV Trigger: AACCCTAGAATTAAATGATCAGCTCTTAGAGACAAG...AGATCTGTTGCTGACCAGCCCTCTTCCCCGAGAGTCTGGGGAAAGCCATTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAAAACTACTGCTGACTTACTGTTTTTCAAGCTTAGGAGTTTCACTGTCCTAGTGGACAGTGGACACTaGTCCCCACAGAGAATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QKTTADLLFFKLRSFTVLVDSGH*SPQRMP Trigger: TGGCATTCTCTGTGGGGAGCAGTGTCCACTGTCCAC...TAGGACAGTGAAACTCCTAAGCTTGAAAAACAGTAAGTCAGCAGTAGTTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CAA 90 bp | AAATTCCCGTCTAACTTGTTTATCTGTTCAAGTTTCATTCCGTTCTaGCTGTTCCTGCTTCCTCTGCTCACAGGCGTTCTTGCTGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KFPSNLFICSSFIPF*LFLLPLLTGVLAVP Trigger: AGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGGAACAGCAAGAACGGAATGAAACTTGAACAGATAAACAAGTTAGACGGGAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CAA 90 bp | CACCAACTTTTGTCTTTTGCAGTCCTCAGGTTAAGCCCGCTGGCTTaGGTGTTTCTCCTCTTGCTTGTAGTCTTGACTTCTTGTTACTTA | + |
|
Preference number: 2 (lower is better) Translates to: HQLLSFAVLRLSPLA*VFLLLLVVLTSCYL Trigger: TAAGTAACAAGAAGTCAAGACTACAAGCAAGAGGAGAAACACCAAAGCCAGCGGGCTTAACCTGAGGACTGCAAAAGACAAAAGTTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR GCA 90 bp | GTACGTGCTTGGGGTTTGCTAAAGATGAAGCTACTATGGGCTTTTATTTGGTGTAAAAGAGAAAGTGGGTaGTCTCCTCTGCTGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: VRAWGLLKMKLLWAFIWCKRESG*SPLLRE Trigger: TTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTT...ACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CAA 90 bp | GAGGTATTTCAGGTAACGTCTCTCTCTTCTGTACGTGCTTGGGGTTaGCTAAAGATGAAGCTACTATGGGCTTTTATTTGGTGTTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: EVFQVTSLSSVRAWG*LKMKLLWAFIWCWS Trigger: TGACCAACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTACAGAAGAGAGAGACGTTACCTGAAATACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTTAACTGTCATGTTCCTCTGGAGCACAGCAGTGGTAAAAGTGGGCCAGTCAGCTTTTATTTGGTGTTaGTCAACTGTTCCTGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: YLTVMFLWSTAVVKVGQSAFIWC*STVPVQ Trigger: TTGTACAGGAACAGTTGACCAACACCAAATAAAAGC...TGACTGGCCCACTTTTACCACTGCTGTGCTCCAGAGGAACATGACAGTTAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CAA 90 bp | TCAAAACACAAAGACCAGGACTGTGGTGATGACGGTAGCTCCAGCTaGTCTCTAAGAGCTGATCATTTAATTCTAGGGTTTAATAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: SKHKDQDCGDDGSSS*SLRADHLILGFNRI Trigger: AATCCTATTAAACCCTAGAATTAAATGATCAGCTCTTAGAGACAAGCTGGAGCTACCGTCATCACCACAGTCCTGGTCTTTGTGTTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGGAGGGCAAAATTCCCATCAAAGGCCATTACCATTCATCCTTTTGAACCAAAGCCTTGTCAATATTaGAAGCCAACATCTGGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TWRAKFPSKAITIHPFEPKPCQY*KPTSGS Trigger: AGAACCAGATGTTGGCTTGCAATATTGACAAGGCTT...TGGTTCAAAAGGATGAATGGTAATGGCCTTTGATGGGAATTTTGCCCTCCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR TCA 90 bp | GTACGTGCTTGGGGTTTGCTAAAGATGAAGCTACTATGGGCTTTTATTTGGTGTATACACTTGGTACTATaGTATCAAAATCAGAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VRAWGLLKMKLLWAFIWCIHLVL*YQNQRE Trigger: CTCCCTCTGATTTTGATATCATAGTACCAAGTGTAT...ACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CAA 90 bp | CTCACGGATGAGGCTTCCCTTTGCTTCAGGCTAGGTTACTATCCTTaGCTATATTTGCATCTGATAAAAGTGCATCTTGTAAAATACAAT | + |
|
Preference number: 2 (lower is better) Translates to: LTDEASLCFRLGYYP*LYLHLIKVHLVKYN Trigger: ATTGTATTTTACAAGATGCACTTTTATCAGATGCAAATATAGCAAAGGATAGTAACCTAGCCTGAAGCAAAGGGAAGCCTCATCCGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CAA 90 bp | CCCACAGCTATTAATTTCAACCTTCCTATTAAATTCCCGTCTAACTaGTTTATCTGTTCAAGTTTCATTCCGTTCTTGCTGTTCCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: PTAINFNLPIKFPSN*FICSSFIPFLLFLL Trigger: AAGCAGGAACAGCAAGAACGGAATGAAACTTGAACAGATAAACAAGTTAGACGGGAATTTAATAGGAAGGTTGAAATTAATAGCTGTGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CAA 90 bp | GAGGCTTCCCTTTGCTTCAGGCTAGGTTACTATCCTTTGCTATATTaGCATCTGATAAAAGTGCATCTTGTAAAATACAATTATCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EASLCFRLGYYPLLY*HLIKVHLVKYNYPS Trigger: AGAAGGATAATTGTATTTTACAAGATGCACTTTTATCAGATGCAAATATAGCAAAGGATAGTAACCTAGCCTGAAGCAAAGGGAAGCCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR TCA 72 bp | TGCCGAGCTCTGGGCACGTGCCACAGCAGTGAGTGCTaGGGGGCTCCGCCCAGCAGACACCCACCCCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: CRALGTCHSSEC*GAPPSRHPPPL Trigger: TAATGGGGGTGGGTGTCTGCTGGGCGGAGCCCCTCAGCACTCACTGCTGTGGCACGTGCCCAGAGCTCGGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR TCA 72 bp | TGCCAACGCTGCACCTTAGCCAGGGTTGCTAGATGGTaGGGCCACTCCTCAGGATGTGCCCACCAGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CQRCTLARVARW*GHSSGCAHQLS Trigger: GGAGAGCTGGTGGGCACATCCTGAGGAGTGGCCTCACCATCTAGCAACCCTGGCTAAGGTGCAGCGTTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR TCA 72 bp | TCTCTGTCATCGCACACAGCCCTTTCTGAAGTGAGGTaGGCTGTCGCTTGGTCCCACCTGTCGCCCAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLSSHTALSEVR*AVAWSHLSPSL Trigger: CAGGCTGGGCGACAGGTGGGACCAAGCGACAGCTCACCTCACTTCAGAAAGGGCTGTGTGCGATGACAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | AGGGAGGTGGCCGATGGAGGTGGTACTAGAGCATCATaGGCAAGCACAGACAGGAAAGCCTCCTGGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: REVADGGGTRAS*ASTDRKASWEP Trigger: AGGCTCCCAGGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGCCACCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR TCA 72 bp | AGGCTTCTCTGTCATCGCACACAGCCCTTTCTGAAGTaGGGTGAGCTGTCGCTTGGTCCCACCTGTCGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLLCHRTQPFLK*GELSLGPTCRP Trigger: TGGGCGACAGGTGGGACCAAGCGACAGCTCACCTCACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR GCA 72 bp | CCTGCTTCCTCTGCTCACAGGCGTTCTTGCTGTTCCTaGCTCCTCTGCTCACAGGCTTCTCTGTCATCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PASSAHRRSCCS*LLCSQASLSSH Trigger: GTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | GATCCAGCTACCAGAACGGGAGTGGGTTCAGGGAGGTaGCCGATGGAGGTGGTACTAGAGCATCATGGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: DPATRTGVGSGR*PMEVVLEHHGQ Trigger: TTGCCCATGATGCTCTAGTACCACCTCCATCGGCCACCTCCCTGAACCCACTCCCGTTCTGGTAGCTGGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR TCA 72 bp | TCTCCAGGTCCTGCCACCCTGAGAGAGGCAGCTGCTTaGCATAATGACAGAACATACAGACCCCAGGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SPGPATLREAAA*HNDRTYRPQGP Trigger: TGGGCCCTGGGGTCTGTATGTTCTGTCATTATGTCAAGCAGCTGCCTCTCTCAGGGTGGCAGGACCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR TCA 72 bp | CTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTaGAGTGAGGTGAGCTGTCGCTTGGTCCCACCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTGFSVIAHSPF*SEVSCRLVPPV Trigger: GACAGGTGGGACCAAGCGACAGCTCACCTCACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR GCA 72 bp | GTCATGTGGACAGTGGACACTGCTCCCCACAGAGAATaGCAACGCTGCACCTTAGCCAGGGTTGCTAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: VMWTVDTAPHRE*QRCTLARVARW Trigger: CCATCTAGCAACCCTGGCTAAGGTGCAGCGTTGGCATTCTCTGTGGGGAGCAGTGTCCACTGTCCACATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CCA 72 bp | CCTGGGCCTCAACAGAGGCACTGCGTAGCTTCTCTCTaGCTTCCCCTCGTTTCTGGATTGAGACTGCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PGPQQRHCVASL*LPLVSGLRLLS Trigger: GGAAAGCAGTCTCAATCCAGAAACGAGGGGAAGCCAGAGAGAAGCTACGCAGTGCCTCTGTTGAGGCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | AGCTGGTGCAACATGACATCAACCAGCACCAGCCAGTaGCTGCTTCAGAGCACCCCAGGCTCTTATGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: SWCNMTSTSTSQ*LLQSTPGSYVI Trigger: GATCACATAAGAGCCTGGGGTGCTCTGAAGCAGCCACTGGCTGGTGCTGGTTGATGTCATGTTGCACCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCTGCTCACAGGCGTTCTaGCTGTTCCTGCCTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SHIKYCRGEIKPQPHPTSCSQAF*LFLPPL Trigger: CAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCA...GCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTGAAGTGCTCTCTACAATGGCATaGTGTGGCTTCCTGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: CLLCSQASLSSHTALSEVLSTMA*CGFLRW Trigger: CCATCTCAGGAAGCCACACAATGCCATTGTAGAGAG...CACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR TCA 72 bp | CTTAGAAGACGACTGGAAGAGACTGGGAAGTGTTTTTaGGCTGCTGTCTCCAGGTCCTGCCACCCTGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRRRLEETGKCF*AAVSRSCHPER Trigger: TCTCTCAGGGTGGCAGGACCTGGAGACAGCAGCTCAAAAACACTTCCCAGTCTCTTCCAGTCGTCTTCTAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR TCA 72 bp | GAGCCCACTTTGAGATTACTGAGAGCTGGTGCAACATaGCATCAACCAGCACCAGCCAGTGGCTGCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EPTLRLLRAGAT*HQPAPASGCFR Trigger: TCTGAAGCAGCCACTGGCTGGTGCTGGTTGATGTCATGTTGCACCAGCTCTCAGTAATCTCAAAGTGGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR GCA 72 bp | AGCACACCTGCTACACAGTCTCATCTGCCTCTCTCTTaGCTGCTGATAGCTATAAGGCCCAGAGCACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: STPATQSHLPLS*LLIAIRPRALG Trigger: TCCAAGTGCTCTGGGCCTTATAGCTATCAGCAGGCAAGAGAGAGGCAGATGAGACTGTGTAGCAGGTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR GCA 72 bp | AGTCTCAGAGCCCACTTTGAGATTACTGAGAGCTGGTaGAACATGACATCAACCAGCACCAGCCAGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLRAHFEITESW*NMTSTSTSQWL Trigger: CAGCCACTGGCTGGTGCTGGTTGATGTCATGTTGCACCAGCTCTCAGTAATCTCAAAGTGGGCTCTGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | GCACTGCGTAGCTTCTCTCTGGCTTCCCCTCGTTTCTaGATTGAGACTGCTTTCCCTTATTCACTGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ALRSFSLASPRF*IETAFPYSLSL Trigger: CAGGGACAGTGAATAAGGGAAAGCAGTCTCAATCCAGAAACGAGGGGAAGCCAGAGAGAAGCTACGCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR GCA 72 bp | CTAAAGGTCACAAGCAGGTCACAGGGGCTGACTAAGTaGATCTGGTGGCGAGAGTTTCTTTCCGAGTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LKVTSRSQGLTK*IWWREFLSESS Trigger: AGAAGACTCGGAAAGAAACTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGTGACCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CCA 72 bp | GTCACAAGCAGGTCACAGGGGCTGACTAAGTGCATCTaGTGGCGAGAGTTTCTTTCCGAGTCTTCTAGGATT | + |
|
Preference number: 3 (lower is better) Translates to: VTSRSQGLTKCI*WREFLSESSRI Trigger: AATCCTAGAAGACTCGGAAAGAAACTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAATGGCTTTCCCCAGACTCTCGGGGAAGAGGGCTGGTCAGCAACAGATCTACGATGAACAGAAACTaGCTTGGCTTTGCCCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: KQWLSPDSRGRGLVSNRSTMNRN*LGFALL Trigger: TAAGAGGGCAAAGCCAAGCAAGTTTCTGTTCATCGT...AGATCTGTTGCTGACCAGCCCTCTTCCCCGAGAGTCTGGGGAAAGCCATTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCAGCAGTTTCATTCCGTTCTaGCTGTTCCTGCTTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HIKYCRGEIKPQPHPTSSSFIPF*LFLLPL Trigger: CAGAGGAAGCAGGAACAGCAAGAACGGAATGAAACT...GCTGCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | CCGAGGGCCACAATGGCTGACTTAGGACTCTACCTCTaGGACAATTACAGCTGCACCAACTTTTGTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PRATMADLGLYL*DNYSCTNFCLL Trigger: CAAAAGACAAAAGTTGGTGCAGCTGTAATTGTCCCAGAGGTAGAGTCCTAAGTCAGCCATTGTGGCCCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR TCA 72 bp | GGGAAAGCACTAGCACATGTAAACATGGTACTGGGCTaGGCTAGCCTTTCAAGGGACACAGTGATGTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: GKALAHVNMVLG*ASLSRDTVMSC Trigger: ACATGACATCACTGTGTCCCTTGAAAGGCTAGCTCAGCCCAGTACCATGTTTACATGTGCTAGTGCTTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR GCA 72 bp | TCTGGGACAATTACAGCTGCACCAACTTTTGTCTTTTaGAGTCCTCAGGTTAAGCCCGCTGGCTTTGGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SGTITAAPTFVF*SPQVKPAGFGV Trigger: AACACCAAAGCCAGCGGGCTTAACCTGAGGACTGCAAAAGACAAAAGTTGGTGCAGCTGTAATTGTCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | ACAAGCAGGTCACAGGGGCTGACTAAGTGCATCTGGTaGCGAGAGTTTCTTTCCGAGTCTTCTAGGATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TSRSQGLTKCIW*REFLSESSRIL Trigger: TAAAATCCTAGAAGACTCGGAAAGAAACTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTTTCTGAAGTGAACATGTCTGATTGTTaGTACACAGAAGACATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLLCSQASLSSHTALSEVNMSDC*YTEDML Trigger: CAACATGTCTTCTGTGTACAAACAATCAGACATGTT...CACTTCAGAAAGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTCTATACAAAAGAGAAAGTGGGTGCTCTCCTCTGCTGAGGGAAAGCACTGTAGACACATTAATGTaGTGGCGCTCTGTCCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CFLYKRESGCSPLLRESTVDTLM*WRSVLG Trigger: TCCTAGGACAGAGCGCCACAACATTAATGTGTCTAC...AGTGCTTTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTATAGAAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR GCA 72 bp | ACAGACCCCAGGGCCCACAAGAAGCCTTGTCAATATTaGAAGCCAACATCTGGTTCTACCTCTTATTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: TDPRAHKKPCQY*KPTSGSTSYFL Trigger: TAGGAAATAAGAGGTAGAACCAGATGTTGGCTTGCAATATTGACAAGGCTTCTTGTGGGCCCTGGGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CCA 72 bp | AGAAACTTGCTTGGCTTTGCCCTCTTAGAAGACGACTaGAAGAGACTGGGAAGTGTTTTTGAGCTGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: RNLLGFALLEDD*KRLGSVFELLS Trigger: AGACAGCAGCTCAAAAACACTTCCCAGTCTCTTCCAGTCGTCTTCTAAGAGGGCAAAGCCAAGCAAGTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CCA 72 bp | CTCAGCATGTACATATACTTAACTGTCATGTTCCTCTaGAGCACAGCAGTGGTAAAAGTGGGCCAGTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: LSMYIYLTVMFL*STAVVKVGQSH Trigger: ATGTGACTGGCCCACTTTTACCACTGCTGTGCTCCAGAGGAACATGACAGTTAAGTATATGTACATGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | GGGGAGTTCTATCCAGCTCTCTACAATGGCATTGTGTaGCTTCCTGAGATGGCCATAAAGAACACCTATTTA | + |
|
Preference number: 3 (lower is better) Translates to: GEFYPALYNGIV*LPEMAIKNTYL Trigger: TAAATAGGTGTTCTTTATGGCCATCTCAGGAAGCCACACAATGCCATTGTAGAGAGCTGGATAGAACTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR TCA 72 bp | TTCTATACAAAAGAGAAAGTGGGTGCTCTCCTCTGCTaGGGGAAAGCACTAGCACATGTAAACATGGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: FYTKEKVGALLC*GKALAHVNMVL Trigger: CAGTACCATGTTTACATGTGCTAGTGCTTTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR TCA 72 bp | CAAACATGTCTGATTGTTTGTACACAGAAGACATGTTaGACTGGAGAGGTGTGGGATAGACAGACCAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QTCLIVCTQKTC*TGEVWDRQTKH Trigger: GTGCTTGGTCTGTCTATCCCACACCTCTCCAGTTCAACATGTCTTCTGTGTACAAACAATCAGACATGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | ATTTATTCTCTCTTCCAGTTCCCTAGTATAAGCAGGTaGACTCCAGCTATGACAAGGAAGCACTGCCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: IYSLFQFPSISR*TPAMTRKHCQY Trigger: GTATTGGCAGTGCTTCCTTGTCATAGCTGGAGTCCACCTGCTTATACTAGGGAACTGGAAGAGAGAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | CTTTCAAAAGGTTTCTACGATGAACAGAAACTTGCTTaGCTTTGCCCTCTTAGAAGACGACTGGAAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: LSKGFYDEQKLA*LCPLRRRLEET Trigger: AGTCTCTTCCAGTCGTCTTCTAAGAGGGCAAAGCCAAGCAAGTTTCTGTTCATCGTAGAAACCTTTTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CCA 72 bp | GTACGTGCTTGGGGTTTGCTAAAGATGAAGCTACTATaGGCTTTTATTTGGTGTTGGTCAACTGTTCCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: VRAWGLLKMKLL*AFIWCWSTVPV Trigger: TACAGGAACAGTTGACCAACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | GTATTTCAGGTAACGTCTCTCTCTTCTGTACGTGCTTaGGGTTTGCTAAAGATGAAGCTACTATGGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VFQVTSLSSVRA*GLLKMKLLWAF Trigger: AAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTACAGAAGAGAGAGACGTTACCTGAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | ACTTCCTTGCATCCCACTTTCCACACTAAATACAAATaGGGAGTTCTATCCAGCTCTCTACAATGGCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: TSLHPTFHTKYK*GVLSSSLQWHC Trigger: ACAATGCCATTGTAGAGAGCTGGATAGAACTCCCCATTTGTATTTAGTGTGGAAAGTGGGATGCAAGGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR CCA 72 bp | GGTTTGCTAAAGATGAAGCTACTATGGGCTTTTATTTaGTGTTGGTCAACTGTTCCTGTACAACTGGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLLKMKLLWAFI*CWSTVPVQLGK Trigger: TTTCCCCAGTTGTACAGGAACAGTTGACCAACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| 3UTR TCA 72 bp | TCTTCTAGGATTTTATCATTTCCTCTTCTCCCAGTGTaGTGCTTGCGTAAATGTATGGTAGAGTGTATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SSRILSFPLLPV*CLRKCMVECIS Trigger: AGAGATACACTCTACCATACATTTACGCAAGCATCACACTGGGAGAAGAGGAAATGATAAAATCCTAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CCA 72 bp | ATAATGCTAGCAATCATGGTTGATATTGTCACAGGTTaGCTCCGAGGGTTCAGCAATGATAATTATATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: IMLAIMVDIVTG*LRGFSNDNYIV Trigger: TACAATATAATTATCATTGCTGAACCCTCGGAGCCAACCTGTGACAATATCAACCATGATTGCTAGCATTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGGGGATCCAGCTACCAGAACGGGAGTGGGTTCAGGGAGGTGGCCGATGGTCTAGCGTCTCCTCCTaGTGGGCTTCCATTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: REGIQLPEREWVQGGGRWSSVSS*WASIFL Trigger: CAGGAAAATGGAAGCCCAGCAGGAGGAGACGCTAGA...CCATCGGCCACCTCCCTGAACCCACTCCCGTTCTGGTAGCTGGATCCCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGTCACAAGCAGGTCACAGGGGCTGACTAAGTGCATCTGGTGGCGAGAGGCTTCCTTCTGGCCCTaGGGAGGAGGAAAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVTSRSQGLTKCIWWREASFWP*GGGKAP Trigger: AGGAGCCTTTCCTCCTCCCCAGGGCCAGAAGGAAGC...CTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGTGACCTTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | GCCGATGGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCGGTTGTTGGCGACCATaGAGGCAAATCTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ADGGGTRASWASTDRKASGCWRP*RQISSG Trigger: CCCTGATGAGATTTGCCTTCATGGTCGCCAACAACC...GGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGGACACAGTGATGTCATGTGGACAGTGGACACTGCTCCCCACAGAGAAGATAGAGCCAGCTGGTaGGGTCCTCGGTCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKGHSDVMWTVDTAPHREDRASW*GPRSPR Trigger: CCTTGGAGACCGAGGACCTCACCAGCTGGCTCTATC...TTCTCTGTGGGGAGCAGTGTCCACTGTCCACATGACATCACTGTGTCCCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAAGCCTCCTGGGAGCCTGCTCACGGATGAGGCTTCCCTTTGCTTCAGGCGGCCATTCTTACATTaGCGTCGGTCCTGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGKPPGSLLTDEASLCFRRPFLH*RRSCLS Trigger: AGAAAGACAGGACCGACGCCAATGTAAGAATGGCCG...CCTGAAGCAAAGGGAAGCCTCATCCGTGAGCAGGCTCCCAGGAGGCTTTCCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGGGATCCAGCTACCAGAACGGGAGTGGGTTCAGGGAGGTGGCCGATGGATAGCAGATGTAGGATaGAATAGCGACCAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: REGIQLPEREWVQGGGRWIADVG*NSDQVV Trigger: AACAACCTGGTCGCTATTCCATCCTACATCTGCTAT...CCATCGGCCACCTCCCTGAACCCACTCCCGTTCTGGTAGCTGGATCCCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| 3UTR CAA 72 bp | TCTTGCTGTTCCTGCTTCCTCTGCTCACAGGCGTTCTaGCTGTTCCTGCCTCCTCTGCTCACAGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCCSCFLCSQAF*LFLPPLLTGFS Trigger: AGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAAGAACGCCTGTGAGCAGAGGAAGCAGGAACAGCAAGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCCCCACAGAGAATGCCAACGCTGCACCTTAGCCAGGGTTGCTAGATGGCCCAGGATCCAGGTCTaGATGTCTATTGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAPHRECQRCTLARVARWPRIQV*MSIGSA Trigger: AGCTGAACCAATAGACATTCAGACCTGGATCCTGGG...CCATCTAGCAACCCTGGCTAAGGTGCAGCGTTGGCATTCTCTGTGGGGAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | CGTAGCTTCTCTCTGGCTTCCCCTCGTTTCTGGATTGAGACTGCTTTCCCTTATGATAGAGCCAGCTGGTaGGGTCCTCGGTCTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSFSLASPRFWIETAFPYDRASW*GPRSPR Trigger: CCTTGGAGACCGAGGACCTCACCAGCTGGCTCTATC...ATAAGGGAAAGCAGTCTCAATCCAGAAACGAGGGGAAGCCAGAGAGAAGCTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAAGCCTCCTGGGAGCCTGCTCACGGATGAGGCTTCCCTTTGCTTCAGGACGCAAAGGACTGGATaGGGAATATCCACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGKPPGSLLTDEASLCFRTQRTG*GISTCC Trigger: GCAACATGTGGATATTCCTCATCCAGTCCTTTGCGT...CCTGAAGCAAAGGGAAGCCTCATCCGTGAGCAGGCTCCCAGGAGGCTTTCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | GCCGATGGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCACGCAAAGGACTGGATaGGGAATATCCACATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ADGGGTRASWASTDRKASTQRTG*GISTCC Trigger: GCAACATGTGGATATTCCTCATCCAGTCCTTTGCGT...GGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | GCCGATGGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCGTACCACAGATAGCCTaGCAAAAACGCAAAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ADGGGTRASWASTDRKASVPQIA*QKRKGL Trigger: CAGTCCTTTGCGTTTTTGTCAGGCTATCTGTGGTAC...GGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCCCCACAGAGAATGCCAACGCTGCACCTTAGCCAGGGTTGCTAGATGGGTACCACAGATAGCCTaGCAAAAACGCAAAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: TAPHRECQRCTLARVARWVPQIA*QKRKGL Trigger: CAGTCCTTTGCGTTTTTGTCAGGCTATCTGTGGTAC...CCATCTAGCAACCCTGGCTAAGGTGCAGCGTTGGCATTCTCTGTGGGGAGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | GCCGATGGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCACATCTCCAGTTGCCTaGTGGTTCACCAACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: ADGGGTRASWASTDRKASTSPVA*WFTNIT Trigger: AGTGATGTTGGTGAACCACCAGGCAACTGGAGATGT...GGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAGGTCACAAGCAGGTCACAGGGGCTGACTAAGTGCATCTGGTGGCGAGAGATATCCACATGTTGCTaGGGGTCATCTCTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LKVTSRSQGLTKCIWWREISTCC*GSSLCT Trigger: TGTGCAGAGAGATGACCCTCAGCAACATGTGGATAT...CTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGTGACCTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGGACACAGTGATGTCATGTGGACAGTGGACACTGCTCCCCACAGAGAATCTAGCGTCTCCTCCTaGTGGGCTTCCATTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKGHSDVMWTVDTAPHRESSVSS*WASIFL Trigger: CAGGAAAATGGAAGCCCAGCAGGAGGAGACGCTAGA...TTCTCTGTGGGGAGCAGTGTCCACTGTCCACATGACATCACTGTGTCCCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | GCCGATGGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCGGGCACATCTCCAATTaGGAAAATCCTGTAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ADGGGTRASWASTDRKASGHISN*ENPVMD Trigger: GTCCATTACAGGATTTTCCCAATTGGAGATGTGCCC...GGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | ATGATATCAAAATCAGAGGGAGGGGATCCAGCTACCAGAACGGGAGTGGGTTCAGGTTGTTGGCGACCATaGAGGCAAATCTCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MISKSEGGDPATRTGVGSGCWRP*RQISSG Trigger: CCCTGATGAGATTTGCCTTCATGGTCGCCAACAACC...TGAACCCACTCCCGTTCTGGTAGCTGGATCCCCTCCCTCTGATTTTGATATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGGAAGAGGGCTGGTCAGCAACAGATCTCAAAACGCTTCAAGTCTGCTTCCATATCCACATGTTGCTaGGGGTCATCTCTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SGKRAGQQQISKRFKSASISTCC*GSSLCT Trigger: TGTGCAGAGAGATGACCCTCAGCAACATGTGGATAT...GGAAGCAGACTTGAAGCGTTTTGAGATCTGTTGCTGACCAGCCCTCTTCCCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGTTCCTGCCTCCTCTGCTCACAGGCTTCTCTGTCATCGCACACAGCCCTGTTCACCAACATCACTaGTTCATCTTTAGCGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFLPPLLTGFSVIAHSPVHQHH*FIFSDC Trigger: GCAATCGCTAAAGATGAAGCAGTGATGTTGGTGAAC...AGGGCTGTGTGCGATGACAGAGAAGCCTGTGAGCAGAGGAGGCAGGAACAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAGGTCACAAGCAGGTCACAGGGGCTGACTAAGTGCATCTGGTGGCGAGAGGTCCAGCACTCGGAGTaGCTGCAGTATAATTACATA | + |
|
Preference number: 4 (lower is better) Translates to: LKVTSRSQGLTKCIWWREVQHSE*LQYNYI Trigger: TATGTAATTATACTGCAGCCACTCCGAGTGCTGGAC...CTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGTGACCTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCTGGGAGGGTCTGAATGTCTATTaGTTCAGCTTTGGGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGGTRASWASTDRKASWEGLNVY*FSFGIS Trigger: GCTTATCCCAAAGCTGAACCAATAGACATTCAGACC...CTCCCAGGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | GCCGATGGAGGTGGTACTAGAGCATCATGGGCAAGCACAGACAGGAAAGCCTCCGTATCTATTATCCACTaGAGGCCTCTTGATTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ADGGGTRASWASTDRKASVSIIH*RPLDLH Trigger: ATGCAAATCAAGAGGCCTCCAGTGGATAATAGATAC...GGAGGCTTTCCTGTCTGTGCTTGCCCATGATGCTCTAGTACCACCTCCATCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTCAGTTCACAAGTCTACAGTTATTGTCACTCTAGAGACTGTGGAAACAGCTTCCTTCTGGCCCTaGGGAGGAGGAAAGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QKSVHKSTVIVTLETVETASFWP*GGGKAP Trigger: AGGAGCCTTTCCTCCTCCCCAGGGCCAGAAGGAAGC...TGTTTCCACAGTCTCTAGAGTGACAATAACTGTAGACTTGTGAACTGACTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGGAAGAGGGCTGGTCAGCAACAGATCTCAAAACGCTTCAAGTCTGCTTCCAAAGCCATTTGTACATaGGTCCTTCGATATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGKRAGQQQISKRFKSASKAICT*VLRYTR Trigger: TCTGGTATATCGAAGGACTCATGTACAAATGGCTTT...GGAAGCAGACTTGAAGCGTTTTGAGATCTGTTGCTGACCAGCCCTCTTCCCCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAGGGACACAGTGATGTCATGTGGACAGTGGACACTGCTCCCCACAGAGAAGTTCACCAACATCACTaGTTCATCTTTAGCGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FKGHSDVMWTVDTAPHREVHQHH*FIFSDC Trigger: GCAATCGCTAAAGATGAAGCAGTGATGTTGGTGAAC...TTCTCTGTGGGGAGCAGTGTCCACTGTCCACATGACATCACTGTGTCCCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
||
| CDS-3UTR GCA 90 bp | TCCCACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCTCCATTTTCCTGCCGTaGTACAAGTGCCTTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SHIKYCRGEIKPQPHPTSSIFLP*YKCLQN Trigger: ATTTTGAAGGCACTTGTAGCACGGCAGGAAAATGGA...GCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR CCA 90 bp | TCCCACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCATAGCAGATGTAGGATaGAATAGCGACCAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHIKYCRGEIKPQPHPTSIADVG*NSDQVV Trigger: AACAACCTGGTCGCTATTCCATCCTACATCTGCTAT...GCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR CCA 90 bp | AAACAATGGCTTTCCCCAGACTCTCGGGGAAGAGGGCTGGTCAGCAACAGATCTGTATCTATTATCCACTaGAGGCCTCTTGATTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQWLSPDSRGRGLVSNRSVSIIH*RPLDLH Trigger: ATGCAAATCAAGAGGCCTCCAGTGGATAATAGATAC...AGATCTGTTGCTGACCAGCCCTCTTCCCCGAGAGTCTGGGGAAAGCCATTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGGACACAGTGATGTCATGTGGACAGTGGACACTGCTCCCCACAGAGAAAAAGCCATTTGTACATaGGTCCTTCGATATACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKGHSDVMWTVDTAPHREKAICT*VLRYTR Trigger: TCTGGTATATCGAAGGACTCATGTACAAATGGCTTT...TTCTCTGTGGGGAGCAGTGTCCACTGTCCACATGACATCACTGTGTCCCTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CAA 72 bp | TACAGACCCCAGGGCCCACAAGAAGCCTTGTCAATATaGCAAGCCAACATCTGGTTCTACCTCTTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRPQGPQEALSI*QANIWFYLLFP Trigger: AGGAAATAAGAGGTAGAACCAGATGTTGGCTTGCAATATTGACAAGGCTTCTTGTGGGCCCTGGGGTCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CAA 72 bp | TTGTCTTTTGCAGTCCTCAGGTTAAGCCCGCTGGCTTaGGTGTTTCTCCTCTTGCTTGTAGTCTTGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSFAVLRLSPLA*VFLLLLVVLTS Trigger: AGAAGTCAAGACTACAAGCAAGAGGAGAAACACCAAAGCCAGCGGGCTTAACCTGAGGACTGCAAAAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS-3UTR TCA 90 bp | CACATAAAGTACTGTAGAGGGGAAATAAAGCCGCAGCCTCACCCAACCAGCAGCGTATACTTGAAAATATaGTCCATCAGCCACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: HIKYCRGEIKPQPHPTSSVYLKI*SISHII Trigger: GATGATGTGGCTGATGGATCATATTTTCAAGTATAC...GCTGCTGGTTGGGTGAGGCTGCGGCTTTATTTCCCCTCTACAGTACTTTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS-3UTR GCA 90 bp | GGTGGCGAGAGTTTCTTTCCGAGTCTTCTAGGATTTTATCATTTCCTCTTCTCCACACACATCTCCAGTTaGCTGGTGGTTCACCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GGESFFPSLLGFYHFLFSTHISS*LVVHQH Trigger: ATGTTGGTGAACCACCAGGCAACTGGAGATGTGTGT...GGAGAAGAGGAAATGATAAAATCCTAGAAGACTCGGAAAGAAACTCTCGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CCA 90 bp | TGCTTTCTATACAAAAGAGAAAGTGGGTGCTCTCCTCTGCTGAGGGAAAGCACTGTCCAGCACTCGGAGTaGCTGCAGTATAATTACATA | + |
|
Preference number: 4 (lower is better) Translates to: CFLYKRESGCSPLLRESTVQHSE*LQYNYI Trigger: TATGTAATTATACTGCAGCCACTCCGAGTGCTGGAC...AGTGCTTTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTATAGAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CAA 72 bp | CTCAGGTTAAGCCCGCTGGCTTTGGTGTTTCTCCTCTaGCTTGTAGTCTTGACTTCTTGTTACTTAACTACC | + |
|
Preference number: 4 (lower is better) Translates to: LRLSPLALVFLL*LVVLTSCYLTT Trigger: GGTAGTTAAGTAACAAGAAGTCAAGACTACAAGCAAGAGGAGAAACACCAAAGCCAGCGGGCTTAACCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGTCAGTTCACAAGTCTACAGTTATTGTCACTCTAGAGACTGTGGAAACACCCAGGATCCAGGTCTaGATGTCTATTGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKSVHKSTVIVTLETVETPRIQV*MSIGSA Trigger: AGCTGAACCAATAGACATTCAGACCTGGATCCTGGG...TGTTTCCACAGTCTCTAGAGTGACAATAACTGTAGACTTGTGAACTGACTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS-3UTR GCA 90 bp | TGCTTTCTATACAAAAGAGAAAGTGGGTGCTCTCCTCTGCTGAGGGAAAGCACTTCCATTTTCCTGCCGTaGTACAAGTGCCTTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CFLYKRESGCSPLLRESTSIFLP*YKCLQN Trigger: ATTTTGAAGGCACTTGTAGCACGGCAGGAAAATGGA...AGTGCTTTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTATAGAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CCA 90 bp | TGCTTTCTATACAAAAGAGAAAGTGGGTGCTCTCCTCTGCTGAGGGAAAGCACTGGTCTGAATGTCTATTaGTTCAGCTTTGGGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CFLYKRESGCSPLLRESTGLNVY*FSFGIS Trigger: GCTTATCCCAAAGCTGAACCAATAGACATTCAGACC...AGTGCTTTCCCTCAGCAGAGGAGAGCACCCACTTTCTCTTTTGTATAGAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CAA 72 bp | CAGGTAACGTCTCTCTCTTCTGTACGTGCTTGGGGTTaGCTAAAGATGAAGCTACTATGGGCTTTTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSLSSVRAWG*LKMKLLWAFIW Trigger: CCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTACAGAAGAGAGAGACGTTACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CAA 72 bp | GGTATTTCAGGTAACGTCTCTCTCTTCTGTACGTGCTaGGGGTTTGCTAAAGATGAAGCTACTATGGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GISGNVSLFCTC*GFAKDEATMGF Trigger: AAAGCCCATAGTAGCTTCATCTTTAGCAAACCCCAAGCACGTACAGAAGAGAGAGACGTTACCTGAAATACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS-3UTR CCA 90 bp | ACTTGGAGGGCAAAATTCCCATCAAAGGCCATTACCATTCATCCTTTTGAACCAGGGCACATCTCCAATTaGGAAAATCCTGTAATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TWRAKFPSKAITIHPFEPGHISN*ENPVMD Trigger: GTCCATTACAGGATTTTCCCAATTGGAGATGTGCCC...TGGTTCAAAAGGATGAATGGTAATGGCCTTTGATGGGAATTTTGCCCTCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CAA 72 bp | GGGTTTGCTAAAGATGAAGCTACTATGGGCTTTTATTaGGTGTTGGTCAACTGTTCCTGTACAACTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFAKDEATMGFY*VLVNCSCTTGE Trigger: TTCCCCAGTTGTACAGGAACAGTTGACCAACACCAAATAAAAGCCCATAGTAGCTTCATCTTTAGCAAACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CAA 72 bp | GCACTGCCAATACTCTCAACAAACATGTCTGATTGTTaGTACACAGAAGACATGTTGAACTGGAGAGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALPILSTNMSDC*YTEDMLNWRGV Trigger: CACACCTCTCCAGTTCAACATGTCTTCTGTGTACAAACAATCAGACATGTTTGTTGAGAGTATTGGCAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| 3UTR CAA 72 bp | TCTAACTTGTTTATCTGTTCAAGTTTCATTCCGTTCTaGCTGTTCCTGCTTCCTCTGCTCACAGGCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNLFICSSFIPF*LFLLPLLTGVL Trigger: AAGAACGCCTGTGAGCAGAGGAAGCAGGAACAGCAAGAACGGAATGAAACTTGAACAGATAAACAAGTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS-3UTR GCA 90 bp | CAGAAAACTACTGCTGACTTACTGTTTTTCAAGCTTAGGAGTTTCACTGTCCTAACACACATCTCCAGTTaGCTGGTGGTTCACCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QKTTADLLFFKLRSFTVLTHISS*LVVHQH Trigger: ATGTTGGTGAACCACCAGGCAACTGGAGATGTGTGT...TAGGACAGTGAAACTCCTAAGCTTGAAAAACAGTAAGTCAGCAGTAGTTTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CCA 90 bp | CAGAAAACTACTGCTGACTTACTGTTTTTCAAGCTTAGGAGTTTCACTGTCCTAACATCTCCAGTTGCCTaGTGGTTCACCAACATCACT | + |
|
Preference number: 4 (lower is better) Translates to: QKTTADLLFFKLRSFTVLTSPVA*WFTNIT Trigger: AGTGATGTTGGTGAACCACCAGGCAACTGGAGATGT...TAGGACAGTGAAACTCCTAAGCTTGAAAAACAGTAAGTCAGCAGTAGTTTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| 3UTR CAA 72 bp | GAGGCTTCCCTTTGCTTCAGGCTAGGTTACTATCCTTaGCTATATTTGCATCTGATAAAAGTGCATCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EASLCFRLGYYP*LYLHLIKVHLV Trigger: TACAAGATGCACTTTTATCAGATGCAAATATAGCAAAGGATAGTAACCTAGCCTGAAGCAAAGGGAAGCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR GCA 90 bp | CAGAAGTCAGTTCACAAGTCTACAGTTATTGTCACTCTAGAGACTGTGGAAACATCCATTTTCGATCTCTaGTCCTGTAATTATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKSVHKSTVIVTLETVETSIFDL*SCNYVQ Trigger: TTGAACATAATTACAGGAGCAGAGATCGAAAATGGA...TGTTTCCACAGTCTCTAGAGTGACAATAACTGTAGACTTGTGAACTGACTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS CCA 90 bp | AGCCCAGCCACGGAGCTTCTTCCACGGTCACGGCCATTCTTACATTaGCGTCGGTCCTGTCTTTCTCAGTGGGCGCGAGCGGCGAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPATELLPRSRPFLH*RRSCLSQWARAASG Trigger: GCCGCTCGCCGCTCGCGCCCACTGAGAAAGACAGGACCGACGCCAATGTAAGAATGGCCGTGACCGTGGAAGAAGCTCCGTGGCTGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110856.8 |
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| CDS-3UTR CAA 90 bp | GTGCCCACCAGCTCTCCAGGCTACCAGTACCTCAGCATGAAGGGTAGACACATTGGAATAGCGACCAGGTaGTTGGCGACCATGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPTSSPGYQYLSMKGRHIGIATR*LATMKA Trigger: TGCCTTCATGGTCGCCAACAACCTGGTCGCTATTCC...AATGTGTCTACCCTTCATGCTGAGGTACTGGTAGCCTGGAGAGCTGGTGGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CAA 90 bp | TCGGGGAAGAGGGCTGGTCAGCAACAGATCTCAAAACGCTTCAAGTCTGCTTCCGGAATAGCGACCAGGTaGTTGGCGACCATGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGKRAGQQQISKRFKSASGIATR*LATMKA Trigger: TGCCTTCATGGTCGCCAACAACCTGGTCGCTATTCC...GGAAGCAGACTTGAAGCGTTTTGAGATCTGTTGCTGACCAGCCCTCTTCCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110855.8 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTCACAAGCAGGTCACAGGGGCTGACTAAGTGCATCTGGTGGCGAGAGATAGCGACCAGGTTGTaGGCGACCATGAAGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKVTSRSQGLTKCIWWREIATRL*ATMKAN Trigger: ATTTGCCTTCATGGTCGCCAACAACCTGGTCGCTAT...CTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGTGACCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CAA 90 bp | CTAAAGGTCACAAGCAGGTCACAGGGGCTGACTAAGTGCATCTGGTGGCGAGAGTACACACATCTCCAGTaGCCTGGTGGTTCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LKVTSRSQGLTKCIWWREYTHLQ*PGGSPT Trigger: TGTTGGTGAACCACCAGGCAACTGGAGATGTGTGTA...CTCTCGCCACCAGATGCACTTAGTCAGCCCCTGTGACCTGCTTGTGACCTTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CAA 90 bp | TTCAAGGGACACAGTGATGTCATGTGGACAGTGGACACTGCTCCCCACAGAGAAATAGCGACCAGGTTGTaGGCGACCATGAAGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FKGHSDVMWTVDTAPHREIATRL*ATMKAN Trigger: ATTTGCCTTCATGGTCGCCAACAACCTGGTCGCTAT...TTCTCTGTGGGGAGCAGTGTCCACTGTCCACATGACATCACTGTGTCCCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CAA 90 bp | GGTGGCGAGAGTTTCTTTCCGAGTCTTCTAGGATTTTATCATTTCCTCTTCTCCTACACACATCTCCAGTaGCCTGGTGGTTCACCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GGESFFPSLLGFYHFLFSYTHLQ*PGGSPT Trigger: TGTTGGTGAACCACCAGGCAACTGGAGATGTGTGTA...GGAGAAGAGGAAATGATAAAATCCTAGAAGACTCGGAAAGAAACTCTCGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS-3UTR CAA 90 bp | GGTGGCGAGAGTTTCTTTCCGAGTCTTCTAGGATTTTATCATTTCCTCTTCTCCATTCCTAAAAGCCATTaGTACATGAGTCCTTCGATA | + |
|
Preference number: 5 (lower is better) Translates to: GGESFFPSLLGFYHFLFSIPKSH*YMSPSI Trigger: TATCGAAGGACTCATGTACAAATGGCTTTTAGGAAT...GGAGAAGAGGAAATGATAAAATCCTAGAAGACTCGGAAAGAAACTCTCGCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110855.8 ENSMUST00000110856.8 |
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| CDS CAA 90 bp | CAGCCCAGCCACGGAGCTTCTTCCACGGTCACGGCCATTCTTACATaGGCGTCGGTCCTGTCTTTCTCAGTGGGCGCGAGCGGCGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QPSHGASSTVTAILT*ASVLSFSVGASGER Trigger: CCGCTCGCCGCTCGCGCCCACTGAGAAAGACAGGACCGACGCCAATGTAAGAATGGCCGTGACCGTGGAAGAAGCTCCGTGGCTGGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110856.8 |
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| CDS CCA 72 bp | ACGGAGCTTCTTCCACGGTCACGGCCATTCTTACATTaGCGTCGGTCCTGTCTTTCTCAGTGGGCGCGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: TELLPRSRPFLH*RRSCLSQWARA Trigger: CGCTCGCGCCCACTGAGAAAGACAGGACCGACGCCAATGTAAGAATGGCCGTGACCGTGGAAGAAGCTCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110856.8 |
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| CDS CAA 72 bp | CACGGAGCTTCTTCCACGGTCACGGCCATTCTTACATaGGCGTCGGTCCTGTCTTTCTCAGTGGGCGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: HGASSTVTAILT*ASVLSFSVGAS Trigger: GCTCGCGCCCACTGAGAAAGACAGGACCGACGCCAATGTAAGAATGGCCGTGACCGTGGAAGAAGCTCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110856.8 |
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