RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LPCAT4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027134

Ensembl transcript IDs: ENSMUST00000028554.4

Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGCCCTGGCTGCATCCAGGCTGGCACAGCTCGGCATGCAAAGTCGTaGCAGCGGGGCGGGGTGAACCCAGCAACAGGTGCAGGATGGTGC +
Preference number: 5 (lower is better)
Translates to: GPGCIQAGTARHAKS*QRGGVNPATGAGWC
Trigger: GCACCATCCTGCACCTGTTGCTGGGTTCACCCCGCCCCGCTGCCACGACTTTGCATGCCGAGCTGTGCCAGCCTGGATGCAGCCAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 90 bp TGGCAGCGGGGCGGGGTGAACCCAGCAACAGGTGCAGGATGGTGCTaGAGCCGTCTTTGTACAGCAGCCGGTCAGATCCTTCTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: WQRGGVNPATGAGWC*SRLCTAAGQILLPA
Trigger: AGCAGGCAGAAGGATCTGACCGGCTGCTGTACAAAGACGGCTTCAGCACCATCCTGCACCTGTTGCTGGGTTCACCCCGCCCCGCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 90 bp AGGCTGGCACAGCTCGGCATGCAAAGTCGTGGCAGCGGGGCGGGGTaGACCCAGCAACAGGTGCAGGATGGTGCTGAAGCCGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: RLAQLGMQSRGSGAG*TQQQVQDGAEAVFV
Trigger: TACAAAGACGGCTTCAGCACCATCCTGCACCTGTTGCTGGGTTCACCCCGCCCCGCTGCCACGACTTTGCATGCCGAGCTGTGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS GCA 90 bp GCATGCAAAGTCGTGGCAGCGGGGCGGGGTGAACCCAGCAACAGGTaGAGGATGGTGCTGAAGCCGTCTTTGTACAGCAGCCGGTCAGAT +
Preference number: 5 (lower is better)
Translates to: ACKVVAAGRGEPSNR*RMVLKPSLYSSRSD
Trigger: ATCTGACCGGCTGCTGTACAAAGACGGCTTCAGCACCATCCTGCACCTGTTGCTGGGTTCACCCCGCCCCGCTGCCACGACTTTGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS GCA 90 bp AGGAGGCAGAACTTAACCCTCTGGAGGCCGGAGAGGTGTAACTCATaGACGAACGGGTTTGGGGACGCAGAGGACCCAGAGGTGGGATCC +
Preference number: 5 (lower is better)
Translates to: RRQNLTLWRPERCNS*TNGFGDAEDPEVGS
Trigger: GGATCCCACCTCTGGGTCCTCTGCGTCCCCAAACCCGTTCGTGCATGAGTTACACCTCTCCGGCCTCCAGAGGGTTAAGTTCTGCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 90 bp TCTGAGGATCCGAGAGCTGTAACTGTTGGGCAAAGGCCTCTTGGCTaGTCATTCGACTCCGGCCTGGCTCTGCCCCCATGTCCACAAAGC +
Preference number: 5 (lower is better)
Translates to: SEDPRAVTVGQRPLG*SFDSGLALPPCPQS
Trigger: GCTTTGTGGACATGGGGGCAGAGCCAGGCCGGAGTCGAATGATCAGCCAAGAGGCCTTTGCCCAACAGTTACAGCTCTCGGATCCTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS GCA 90 bp GTGCTGAAGCCGTCTTTGTACAGCAGCCGGTCAGATCCTTCTGCCTaGTCTTCAGCAAAGAGCTCAAAGGCCAGGCGAGTCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: VLKPSLYSSRSDPSA*SSAKSSKARRVSSS
Trigger: GGAGGAGCTGACTCGCCTGGCCTTTGAGCTCTTTGCTGAAGAGCAGGCAGAAGGATCTGACCGGCTGCTGTACAAAGACGGCTTCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CCA 90 bp GGACGTTGTTGGCATAAAGGGTGGGGTCCTTACTCTCCTCCAGGCTaGGCTGATAGACAGGGAGGAACTCTACATCCACGATGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRCWHKGWGPYSPPG*ADRQGGTLHPRCCR
Trigger: CCTGCAGCATCGTGGATGTAGAGTTCCTCCCTGTCTATCAGCCCAGCCTGGAGGAGAGTAAGGACCCCACCCTTTATGCCAACAACGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CCA 90 bp ACCTTTGCCAGCTCCCAGAGCTGCGGCTCCAACGCTACCTTCAGCTaGCCCACCACAATCACAGGCAAGCTCCCTACAAACTCACATTCA +
Preference number: 5 (lower is better)
Translates to: TFASSQSCGSNATFS*PTTITGKLPTNSHS
Trigger: TGAATGTGAGTTTGTAGGGAGCTTGCCTGTGATTGTGGTGGGCCAGCTGAAGGTAGCGTTGGAGCCGCAGCTCTGGGAGCTGGCAAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 90 bp ACTCTGCGCCGAGAGGCGGGGTCATGCCGGGAGACTAGGATGGCTTaGTTAAATCGAAGGAGTGCTCCAATGACAGGCACAGAAAGATTC +
Preference number: 5 (lower is better)
Translates to: TLRREAGSCRETRMA*LNRRSAPMTGTERF
Trigger: GAATCTTTCTGTGCCTGTCATTGGAGCACTCCTTCGATTTAATCAAGCCATCCTAGTCTCCCGGCATGACCCCGCCTCTCGGCGCAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 90 bp ACCCCGTTGTGGCATACAGTCTTCCTCCATCCTGTAATTGGTTCCTaGAGCTGCTCTTCAGTGAGACCTGCTACTTGGAGCCACGCGAAG +
Preference number: 5 (lower is better)
Translates to: TPLWHTVFLHPVIGS*SCSSVRPATWSHAK
Trigger: CTTCGCGTGGCTCCAAGTAGCAGGTCTCACTGAAGAGCAGCTTCAGGAACCAATTACAGGATGGAGGAAGACTGTATGCCACAACGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CCA 90 bp ACCAAGAACCCCGTTGTGGCATACAGTCTTCCTCCATCCTGTAATTaGTTCCTGAAGCTGCTCTTCAGTGAGACCTGCTACTTGGAGCCA +
Preference number: 5 (lower is better)
Translates to: TKNPVVAYSLPPSCN*FLKLLFSETCYLEP
Trigger: TGGCTCCAAGTAGCAGGTCTCACTGAAGAGCAGCTTCAGGAACCAATTACAGGATGGAGGAAGACTGTATGCCACAACGGGGTTCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 72 bp CAGCTCGGCATGCAAAGTCGTGGCAGCGGGGCGGGGTaGACCCAGCAACAGGTGCAGGATGGTGCTGAAGCC +
Preference number: 6 (lower is better)
Translates to: QLGMQSRGSGAG*TQQQVQDGAEA
Trigger: GGCTTCAGCACCATCCTGCACCTGTTGCTGGGTTCACCCCGCCCCGCTGCCACGACTTTGCATGCCGAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CCA 72 bp TGCATCCAGGCTGGCACAGCTCGGCATGCAAAGTCGTaGCAGCGGGGCGGGGTGAACCCAGCAACAGGTGCA +
Preference number: 6 (lower is better)
Translates to: CIQAGTARHAKS*QRGGVNPATGA
Trigger: TGCACCTGTTGCTGGGTTCACCCCGCCCCGCTGCCACGACTTTGCATGCCGAGCTGTGCCAGCCTGGATGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 72 bp GCAACCAGGACAGGGGCTTCGAGGCGAGAGGCCCTTTaGCCCCGAACACGGATCCGAAGGAAGCCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: ATRTGASRREAL*PRTRIRRKPSR
Trigger: CCTGCTTGGCTTCCTTCGGATCCGTGTTCGGGGTCAAAGGGCCTCTCGCCTCGAAGCCCCTGTCCTGGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS GCA 72 bp GTCGTGGCAGCGGGGCGGGGTGAACCCAGCAACAGGTaGAGGATGGTGCTGAAGCCGTCTTTGTACAGCAGC +
Preference number: 6 (lower is better)
Translates to: VVAAGRGEPSNR*RMVLKPSLYSS
Trigger: GCTGCTGTACAAAGACGGCTTCAGCACCATCCTGCACCTGTTGCTGGGTTCACCCCGCCCCGCTGCCACGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CAA 72 bp GGAGGCCGGAGAGGTGTAACTCATGCACGAACGGGTTaGGGGACGCAGAGGACCCAGAGGTGGGATCCAGGG +
Preference number: 6 (lower is better)
Translates to: GGRRGVTHARTG*GTQRTQRWDPG
Trigger: CCCTGGATCCCACCTCTGGGTCCTCTGCGTCCCCAAACCCGTTCGTGCATGAGTTACACCTCTCCGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CAA 90 bp CCATGTCCACAAAGCCAGGGGACAGCCCAGCCTTCTGTAGCACCTTaGCCAGCTCCCAGAGCTGCGGCTCCAACGCTACCTTCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: PCPQSQGTAQPSVAP*PAPRAAAPTLPSAG
Trigger: GCCAGCTGAAGGTAGCGTTGGAGCCGCAGCTCTGGGAGCTGGCAAAGGTGCTACAGAAGGCTGGGCTGTCCCCTGGCTTTGTGGACATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 72 bp GGCGGGGTGAACCCAGCAACAGGTGCAGGATGGTGCTaGAGCCGTCTTTGTACAGCAGCCGGTCAGATCCTT +
Preference number: 6 (lower is better)
Translates to: GGVNPATGAGWC*SRLCTAAGQIL
Trigger: AAGGATCTGACCGGCTGCTGTACAAAGACGGCTTCAGCACCATCCTGCACCTGTTGCTGGGTTCACCCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS GCA 72 bp AGAAGTTCTGGAACTGACAGAGGGAGAGGCCCTGGCTaGATCCAGGCTGGCACAGCTCGGCATGCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: RSSGTDRGRGPG*IQAGTARHAKS
Trigger: CGACTTTGCATGCCGAGCTGTGCCAGCCTGGATGCAGCCAGGGCCTCTCCCTCTGTCAGTTCCAGAACTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 72 bp ACAGGGAGGAACTCTACATCCACGATGCTGCAGGGCTaGGAGGCGGTGAGCCAGAGAACTTTGAGTACGCCG +
Preference number: 6 (lower is better)
Translates to: TGRNSTSTMLQG*EAVSQRTLSTP
Trigger: CGGCGTACTCAAAGTTCTCTGGCTCACCGCCTCTCAGCCCTGCAGCATCGTGGATGTAGAGTTCCTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS GCA 72 bp AACTTAACCCTCTGGAGGCCGGAGAGGTGTAACTCATaGACGAACGGGTTTGGGGACGCAGAGGACCCAGAG +
Preference number: 6 (lower is better)
Translates to: NLTLWRPERCNS*TNGFGDAEDPE
Trigger: CTCTGGGTCCTCTGCGTCCCCAAACCCGTTCGTGCATGAGTTACACCTCTCCGGCCTCCAGAGGGTTAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CAA 72 bp CCCAGCAACAGGTGCAGGATGGTGCTGAAGCCGTCTTaGTACAGCAGCCGGTCAGATCCTTCTGCCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PSNRCRMVLKPS*YSSRSDPSACS
Trigger: AGAGCAGGCAGAAGGATCTGACCGGCTGCTGTACAAAGACGGCTTCAGCACCATCCTGCACCTGTTGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS GCA 72 bp CCGTCTTTGTACAGCAGCCGGTCAGATCCTTCTGCCTaGTCTTCAGCAAAGAGCTCAAAGGCCAGGCGAGTC +
Preference number: 6 (lower is better)
Translates to: PSLYSSRSDPSA*SSAKSSKARRV
Trigger: GACTCGCCTGGCCTTTGAGCTCTTTGCTGAAGAGCAGGCAGAAGGATCTGACCGGCTGCTGTACAAAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CCA 72 bp CACAGGCAAGCTCCCTACAAACTCACATTCAGTGGCTaGAATGCCCAGGGCCTGTGCCATGACTCTCTGGAC +
Preference number: 6 (lower is better)
Translates to: HRQAPYKLTFSG*NAQGLCHDSLD
Trigger: GTCCAGAGAGTCATGGCACAGGCCCTGGGCATTCCAGCCACTGAATGTGAGTTTGTAGGGAGCTTGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 72 bp CGAGAGGCGGGGTCATGCCGGGAGACTAGGATGGCTTaGTTAAATCGAAGGAGTGCTCCAATGACAGGCACA +
Preference number: 6 (lower is better)
Translates to: REAGSCRETRMA*LNRRSAPMTGT
Trigger: TGTGCCTGTCATTGGAGCACTCCTTCGATTTAATCAAGCCATCCTAGTCTCCCGGCATGACCCCGCCTCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CCA 72 bp CAGGCACAGAAAGATTCTCAGCTCGAGACACAACCTTaGGCAGGTCACAGGGTAGCAGGACAATTGGGTCAA +
Preference number: 6 (lower is better)
Translates to: QAQKDSQLETQP*AGHRVAGQLGQ
Trigger: TTGACCCAATTGTCCTGCTACCCTGTGACCTGCCCAAGGTTGTGTCTCGAGCTGAGAATCTTTCTGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CAA 90 bp GCTCCAATGACAGGCACAGAAAGATTCTCAGCTCGAGACACAACCTaGGGCAGGTCACAGGGTAGCAGGACAATTGGGTCAAAGAAAGTT +
Preference number: 6 (lower is better)
Translates to: APMTGTERFSARDTT*GRSQGSRTIGSKKV
Trigger: AACTTTCTTTGACCCAATTGTCCTGCTACCCTGTGACCTGCCCAAGGTTGTGTCTCGAGCTGAGAATCTTTCTGTGCCTGTCATTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS TCA 72 bp TGGCATACAGTCTTCCTCCATCCTGTAATTGGTTCCTaGAGCTGCTCTTCAGTGAGACCTGCTACTTGGAGC +
Preference number: 6 (lower is better)
Translates to: WHTVFLHPVIGS*SCSSVRPATWS
Trigger: GCTCCAAGTAGCAGGTCTCACTGAAGAGCAGCTTCAGGAACCAATTACAGGATGGAGGAAGACTGTATGCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4
CDS CAA 72 bp AGGAAAAATAGCAGGCGGCTCAGACCAAGAACCCCGTaGTGGCATACAGTCTTCCTCCATCCTGTAATTGGT +
Preference number: 6 (lower is better)
Translates to: RKNSRRLRPRTP*WHTVFLHPVIG
Trigger: ACCAATTACAGGATGGAGGAAGACTGTATGCCACAACGGGGTTCTTGGTCTGAGCCGCCTGCTATTTTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000028554.4