Pregenerated sensors for LPCAT2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033794Ensembl transcript IDs: ENSMUST00000166599.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAAGCAGCACCCCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTaGTTGGCCTGGCTTTCCTCAAAGATGGAAGCCCTTACCCAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: VSSTPPWSPSLLLLE*LAWLSSKMEALTQV Trigger: AACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 90 bp | CATCTCTACTTCTGCTTGAGTGCTTGGCCTGGCTTTCCTCAAAGATaGAAGCCCTTACCCAAGTTGCTTTTTCCAAGACAGTATCCATGT | + |
|
Preference number: 1 (lower is better) Translates to: HLYFCLSAWPGFPQR*KPLPKLLFPRQYPC Trigger: ACATGGATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 90 bp | AAGAAAGGACCACAACTGAAGAATTGTCTCCATCAGACCAGCCTGTaGACAAGTCAGTGGTACATTTTCTTGAATACTGATGTGAGAGGG | + |
|
Preference number: 1 (lower is better) Translates to: KKGPQLKNCLHQTSL*TSQWYIFLNTDVRG Trigger: CCCTCTCACATCAGTATTCAAGAAAATGTACCACTGACTTGTCCACAGGCTGGTCTGATGGAGACAATTCTTCAGTTGTGGTCCTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR TCA 90 bp | CTGTGTGTATTAGTTTCTGTCAACATGACACAAGCTAGGGCCATTTaGGAAGAAAGGACCACAACTGAAGAATTGTCTCCATCAGACCAG | + |
|
Preference number: 1 (lower is better) Translates to: LCVLVSVNMTQARAI*EERTTTEELSPSDQ Trigger: CTGGTCTGATGGAGACAATTCTTCAGTTGTGGTCCTTTCTTCTCAAATGGCCCTAGCTTGTGTCATGTTGACAGAAACTAATACACACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 90 bp | GTTTGCTTGGTTGTAAAGCCTTGTTTCTGCTTCTTATTTACTGGGTaGATGGGAATACAGGCATATGCCATTGTGCCCAATGAACATTAT | + |
|
Preference number: 1 (lower is better) Translates to: VCLVVKPCFCFLFTG*MGIQAYAIVPNEHY Trigger: ATAATGTTCATTGGGCACAATGGCATATGCCTGTATTCCCATCCACCCAGTAAATAAGAAGCAGAAACAAGGCTTTACAACCAAGCAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR CCA 90 bp | CCAGTAAGCAGCACCCCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTGCTTGGGCTTTCCTCAAAGATaGAAGCCCTTACCCAAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: PVSSTPPWSPSLLLLECLGFPQR*KPLPKL Trigger: CAACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGCC...CAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGCTTACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTCCCTGGGCAAATGGTCCTGGATTGTATAAGTATGCTGAGTGAGCCACGGTTCTGCTTGAGTGCTTaGCCTGGCTTTCCTCAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AFPGQMVLDCISMLSEPRFCLSA*PGFPQR Trigger: TCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAA...CCGTGGCTCACTCAGCATACTTATACAATCCAGGACCATTTGCCCAGGGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR GCA 90 bp | CCAGTAAGCAGCACCCCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTGCTTGAGCCCTTACCCAAGTTaGTTTTTCCAAGACAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: PVSSTPPWSPSLLLLECLSPYPS*FFQDSI Trigger: GATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCT...CAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGCTTACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTGTGCCCAATGAACATTATCTTAAGGGAGGGAAAGGCATTATAATTCCTCAAAGCAGCACCCCTCCATaGTCCCCATCTCTACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: IVPNEHYLKGGKGIIIPQSSTPP*SPSLLL Trigger: CAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGCT...TTGAGGAATTATAATGCCTTTCCCTCCCTTAAGATAATGTTCATTGGGCACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR GCA 90 bp | GGCTTAGCTCATAGTGAATGGTGCCTTCCCTGGGCAAATGGTCCTGGATTGTATTCCTGTTTCCAAGGATaGCTTGAACATCTTAATATT | + |
|
Preference number: 2 (lower is better) Translates to: GLAHSEWCLPWANGPGLYSCFQG*LEHLNI Trigger: AATATTAAGATGTTCAAGGCATCCTTGGAAACAGGA...ATACAATCCAGGACCATTTGCCCAGGGAAGGCACCATTCACTATGAGCTAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTGTGCCCAATGAACATTATCTTAAGGGAGGGAAAGGCATTATAATTCCTCAACTACTTCTGCTTGAGTaGTTGGCCTGGCTTTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: IVPNEHYLKGGKGIIIPQLLLLE*LAWLSS Trigger: TGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAG...TTGAGGAATTATAATGCCTTTCCCTCCCTTAAGATAATGTTCATTGGGCACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CAA 90 bp | ACCCCAACGCAAGCTGTAAATCTTTTTAAGTCTAAGTCTGTTTGCTaGGTTGTAAAGCCTTGTTTCTGCTTCTTATTTACTGGGTGGATG | + |
|
Preference number: 2 (lower is better) Translates to: TPTQAVNLFKSKSVC*VVKPCFCFLFTGWM Trigger: CATCCACCCAGTAAATAAGAAGCAGAAACAAGGCTTTACAACCAAGCAAACAGACTTAGACTTAAAAAGATTTACAGCTTGCGTTGGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR TCA 72 bp | TGGGCAAATGGTCCTGGATTGTATAAGTATGCTGAGTaGGCCACGGGGAGCAAGCCAGTAAGCAGCACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: WANGPGLYKYAE*ATGSKPVSSTP Trigger: AGGGGTGCTGCTTACTGGCTTGCTCCCCGTGGCTCACTCAGCATACTTATACAATCCAGGACCATTTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR GCA 72 bp | ACCCCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTaGTTGGCCTGGCTTTCCTCAAAGATGGAAGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: TPPWSPSLLLLE*LAWLSSKMEAL Trigger: AAGGGCTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 72 bp | CTCCATGGTCCCCATCTCTACTTCTGCTTGAGTGCTTaGCCTGGCTTTCCTCAAAGATGGAAGCCCTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: LHGPHLYFCLSA*PGFPQRWKPLP Trigger: GGGTAAGGGCTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 72 bp | TGGTCCCCATCTCTACTTCTGCTTGAGTGCTTGGCCTaGCTTTCCTCAAAGATGGAAGCCCTTACCCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: WSPSLLLLECLA*LSSKMEALTQV Trigger: AACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATGGGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTAGCTCATAGTGAATGGTGCCTTCCCTGGGCAAATGGTCCTGGATTGTATCATCTCTACTTCTGCTaGAGTGCTTGGCCTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GLAHSEWCLPWANGPGLYHLYFC*SAWPGF Trigger: AAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATG...ATACAATCCAGGACCATTTGCCCAGGGAAGGCACCATTCACTATGAGCTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 72 bp | TTCTGCTTGAGTGCTTGGCCTGGCTTTCCTCAAAGATaGAAGCCCTTACCCAAGTTGCTTTTTCCAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: FCLSAWPGFPQR*KPLPKLLFPRQ Trigger: CTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 72 bp | AATTGTCTCCATCAGACCAGCCTGTGGACAAGTCAGTaGTACATTTTCTTGAATACTGATGTGAGAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NCLHQTSLWTSQ*YIFLNTDVRGL Trigger: AAGCCCTCTCACATCAGTATTCAAGAAAATGTACCACTGACTTGTCCACAGGCTGGTCTGATGGAGACAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 72 bp | CTTGGTTGTAAAGCCTTGTTTCTGCTTCTTATTTACTaGGTGGATGGGAATACAGGCATATGCCATTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGCKALFLLLIY*VDGNTGICHCA Trigger: GGCACAATGGCATATGCCTGTATTCCCATCCACCCAGTAAATAAGAAGCAGAAACAAGGCTTTACAACCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 72 bp | CCACAACTGAAGAATTGTCTCCATCAGACCAGCCTGTaGACAAGTCAGTGGTACATTTTCTTGAATACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PQLKNCLHQTSL*TSQWYIFLNTD Trigger: ATCAGTATTCAAGAAAATGTACCACTGACTTGTCCACAGGCTGGTCTGATGGAGACAATTCTTCAGTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CCA 72 bp | GTTGTAAAGCCTTGTTTCTGCTTCTTATTTACTGGGTaGATGGGAATACAGGCATATGCCATTGTGCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VVKPCFCFLFTG*MGIQAYAIVPN Trigger: ATTGGGCACAATGGCATATGCCTGTATTCCCATCCACCCAGTAAATAAGAAGCAGAAACAAGGCTTTACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATTGTCTCCATCAGACCAGCCTGTGGACAAGTCAGTGGTACATTTTCTTGGTTTCCAAGGATGCCTaGAACATCTTAATATTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KNCLHQTSLWTSQWYIFLVSKDA*NILILG Trigger: CCCTAATATTAAGATGTTCAAGGCATCCTTGGAAAC...CAAGAAAATGTACCACTGACTTGTCCACAGGCTGGTCTGATGGAGACAATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR TCA 72 bp | TTAGTTTCTGTCAACATGACACAAGCTAGGGCCATTTaGGAAGAAAGGACCACAACTGAAGAATTGTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVSVNMTQARAI*EERTTTEELSP Trigger: TGGAGACAATTCTTCAGTTGTGGTCCTTTCTTCTCAAATGGCCCTAGCTTGTGTCATGTTGACAGAAACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR GCA 72 bp | TCTAAGTCTGTTTGCTTGGTTGTAAAGCCTTGTTTCTaGTTCTTATTTACTGGGTGGATGGGAATACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SKSVCLVVKPCF*FLFTGWMGIQA Trigger: TGCCTGTATTCCCATCCACCCAGTAAATAAGAAGCAGAAACAAGGCTTTACAACCAAGCAAACAGACTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGCTTAGCTCATAGTGAATGGTGCCTTCCCTGGGCAAATGGTCCTGGATTGGCACAGTCCCCAGGATaGTGGTGCAGGCCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLAHSEWCLPWANGPGLAQSPG*WCRPSA Trigger: GGCGCTGGGCCTGCACCATCATCCTGGGGACTGTGC...CAATCCAGGACCATTTGCCCAGGGAAGGCACCATTCACTATGAGCTAAGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CAA 72 bp | GCAGCACCCCTCCATGGTCCCCATCTCTACTTCTGCTaGAGTGCTTGGCCTGGCTTTCCTCAAAGATGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AAPLHGPHLYFC*SAWPGFPQRWK Trigger: CTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CAA 72 bp | CCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTGCTaGGCCTGGCTTTCCTCAAAGATGGAAGCCCTTACC | + |
|
Preference number: 4 (lower is better) Translates to: PPWSPSLLLLEC*AWLSSKMEALT Trigger: GGTAAGGGCTTCCATCTTTGAGGAAAGCCAGGCCAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAGCAGCACCCCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTGCTTGGCTGAGTTACCAGGATaGATTTCCCAGCCAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVSSTPPWSPSLLLLECLAELPG*ISQPMG Trigger: TCCCATTGGCTGGGAAATGCATCCTGGTAACTCAGC...CAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGCTTACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | TTAGCTCATAGTGAATGGTGCCTTCCCTGGGCAAATGGTCCTGGATTGTATAAGGACTTGTTCACCTCCTaGGCAGTCCTGCTGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAHSEWCLPWANGPGLYKDLFTS*AVLLSH Trigger: GTGGGACAGCAGGACTGCGCAGGAGGTGAACAAGTC...CTTATACAATCCAGGACCATTTGCCCAGGGAAGGCACCATTCACTATGAGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAGCAGCACCCCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTGCTTGCAGCTTCAAAGCGTTTaGCATCTTGATTCGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVSSTPPWSPSLLLLECLQLQSV*HLDSDC Trigger: ACAGTCCGAATCAAGATGGCAAACGCTTTGAAGCTG...CAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGCTTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAGCAGCACCCCTCCATGGTCCCCATCTCTACTTCTGCTTGAGTGCTTGGCATATTGGTCCAAGTaGTTGTGGATGTTGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVSSTPPWSPSLLLLECLAYWSK*LWMLSQ Trigger: TTGGGACAACATCCACAAGCACTTGGACCAATATGC...CAAGCACTCAAGCAGAAGTAGAGATGGGGACCATGGAGGGGTGCTGCTTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGCTTAGCTCATAGTGAATGGTGCCTTCCCTGGGCAAATGGTCCTGGATTGCCGTATTGGATGGGTTaGACAGGACAGTTAGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGLAHSEWCLPWANGPGLPYWMG*TGQLDL Trigger: TAGGTCTAACTGTCCTGTGCAACCCATCCAATACGG...CAATCCAGGACCATTTGCCCAGGGAAGGCACCATTCACTATGAGCTAAGCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | AAAGATGGAAGCCCTTACCCAAGTTGCTTTTTCCAAGACAGTATCCATGTTACTCCTCCTGCGCAGTCCTaGTGTCCCACACCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KDGSPYPSCFFQDSIHVTPPAQS*CPTPPP Trigger: AGGTGGAGGTGTGGGACAGCAGGACTGCGCAGGAGG...AGTAACATGGATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTCCTCAAAGATGGAAGCCCTTACCCAAGTTGCTTTTTCCAAGACAGTATCACATACCTGGAAGCCTaGGAACCCATTCCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFLKDGSPYPSCFFQDSITYLEA*EPIPSP Trigger: TGGACTTGGAATGGGTTCTCAGGCTTCCAGGTATGT...GATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCATCATTTCCACCTAAAAGTTCTTTTCCTGTTTCCAAGGATGCCTTGAACCCAAGCCAGCTTCCATaGGTAGTTGAAGGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSFPPKSSFPVSKDALNPSQLP*VVEGHP Trigger: CGGGTGCCCTTCAACTACCCATGGAAGCTGGCTTGG...GTTCAAGGCATCCTTGGAAACAGGAAAAGAACTTTTAGGTGGAAATGATGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCCTGGGCAAATGGTCCTGGATTGTATAAGTATGCTGAGTGAGCCACGGCTTTTCTTCTTCACTTaGGATATAAACAGGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFPGQMVLDCISMLSEPRLFFFT*DINRHE Trigger: TTCATGCCTGTTTATATCCCAAGTGAAGAAGAAAAG...CCGTGGCTCACTCAGCATACTTATACAATCCAGGACCATTTGCCCAGGGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTCCTCAAAGATGGAAGCCCTTACCCAAGTTGCTTTTTCCAAGACAGTATCTCTGCTGGAAGAGTGTaGAAACATCTAGGTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFLKDGSPYPSCFFQDSISAGRV*KHLGLA Trigger: TGCCAGACCTAGATGTTTCCACACTCTTCCAGCAGA...GATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | TTTCCTCAAAGATGGAAGCCCTTACCCAAGTTGCTTTTTCCAAGACAGTATCCATGGCACTCCGAAAGCTaGCTGAAGCATAGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FPQRWKPLPKLLFPRQYPWHSES*LKHSCQ Trigger: TTGACAACTATGCTTCAGGCAGCTTTCGGAGTGCCA...TGGATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTTGAGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | AAAGATGGAAGCCCTTACCCAAGTTGCTTTTTCCAAGACAGTATCCATGTTACTTCCTTGCCAGCCATCTaGTGGAAGAGTGTGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDGSPYPSCFFQDSIHVTSLPAI*WKSVET Trigger: TGTTTCCACACTCTTCCAGCAGATGGCTGGCAAGGA...AGTAACATGGATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CAA 72 bp | CCTGGCTTTCCTCAAAGATGGAAGCCCTTACCCAAGTaGCTTTTTCCAAGACAGTATCCATGTTACTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PGFPQRWKPLPK*LFPRQYPCYLE Trigger: CTCTAAGTAACATGGATACTGTCTTGGAAAAAGCAACTTGGGTAAGGGCTTCCATCTTTGAGGAAAGCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCATCATTTCCACCTAAAAGTTCTTTTCCTGTTTCCAAGGATGCCTTGAACCCTGATCTGAATCCTTaGCAGCCATCTGCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSFPPKSSFPVSKDALNPDLNP*QPSAGR Trigger: TCTTCCAGCAGATGGCTGGCAAGGATTCAGATCAGG...GTTCAAGGCATCCTTGGAAACAGGAAAAGAACTTTTAGGTGGAAATGATGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| 3UTR CAA 72 bp | TATTTACTGGGTGGATGGGAATACAGGCATATGCCATaGTGCCCAATGAACATTATCTTAAGGGAGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLLGGWEYRHMP*CPMNIILREGK Trigger: CTTTCCCTCCCTTAAGATAATGTTCATTGGGCACAATGGCATATGCCTGTATTCCCATCCACCCAGTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCATCATTTCCACCTAAAAGTTCTTTTCCTGTTTCCAAGGATGCCTTGAACATGGGTTTGGTAGGTTaGGTAGGCAAGTTAATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SSSFPPKSSFPVSKDALNMGLVG*VGKLMA Trigger: CGCCATTAACTTGCCTACTCAACCTACCAAACCCAT...GTTCAAGGCATCCTTGGAAACAGGAAAAGAACTTTTAGGTGGAAATGATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCATCATTTCCACCTAAAAGTTCTTTTCCTGTTTCCAAGGATGCCTTGAACGTTCTGTATGAAACCTaGTCTGAATCCTTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSFPPKSSFPVSKDALNVLYET*SESLPA Trigger: GGCTGGCAAGGATTCAGATCAGGTTTCATACAGAAC...GTTCAAGGCATCCTTGGAAACAGGAAAAGAACTTTTAGGTGGAAATGATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCATCATTTCCACCTAAAAGTTCTTTTCCTGTTTCCAAGGATGCCTTGAACCTCGGAAGTCTATGGTaGCATCCTGATTCCTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSFPPKSSFPVSKDALNLGSLW*HPDSCQ Trigger: TTGACAGGAATCAGGATGGCACCATAGACTTCCGAG...GTTCAAGGCATCCTTGGAAACAGGAAAAGAACTTTTAGGTGGAAATGATGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR TCA 90 bp | ACCCAAGTTGCTTTTTCCAAGACAGTATCCATGTTACTTAGAGTAAAAACCACTTCTATGGTGCCATCCTaGTTCCTGTCAAAGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQVAFSKTVSMLLRVKTTSMVPS*FLSKRE Trigger: CTCTCTCTTTGACAGGAATCAGGATGGCACCATAGA...AGTGGTTTTTACTCTAAGTAACATGGATACTGTCTTGGAAAAAGCAACTTGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCTAAGTCTGTTTGCTTGGTTGTAAAGCCTTGTTTCTGCTTCTTATTTACTAAAGAAGGTGGAGTGTaGTGCGGAGACAAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSKSVCLVVKPCFCFLFTKEGGV*CGDKDG Trigger: CCCATCTTTGTCTCCGCACCACACTCCACCTTCTTT...AGTAAATAAGAAGCAGAAACAAGGCTTTACAACCAAGCAAACAGACTTAGACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGCTTTTTCCAAGACAGTATCCATGTTACTTAGAGTAAAAACCACTGAGTTGCCAGCCATCTGCTaGAAGAGTGTGGAAACATCT | + |
|
Preference number: 4 (lower is better) Translates to: QVAFSKTVSMLLRVKTTELPAIC*KSVETS Trigger: AGATGTTTCCACACTCTTCCAGCAGATGGCTGGCAA...CTCAGTGGTTTTTACTCTAAGTAACATGGATACTGTCTTGGAAAAAGCAACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTCTTTTCCTGTTTCCAAGGATGCCTTGAACATCTTAATATTAGGGAAATGTTGCATCAAAGAAGGTaGAGTGTGGTGCGGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KFFSCFQGCLEHLNIREMLHQRR*SVVRRQ Trigger: TTGTCTCCGCACCACACTCCACCTTCTTTGATGCAA...CATTTCCCTAATATTAAGATGTTCAAGGCATCCTTGGAAACAGGAAAAGAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS TCA 90 bp | ACAGTCCCCAGGATGATGGTGCAGGCCCAGCGCCAAGCACTCAGGTaGGTGTTGAGAGTGAAGGGACTGTCCACTGCCGGAGGATATAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVPRMMVQAQRQALR*VLRVKGLSTAGGYK Trigger: CTTATATCCTCCGGCAGTGGACAGTCCCTTCACTCTCAACACTCACCTGAGTGCTTGGCGCTGGGCCTGCACCATCATCCTGGGGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 90 bp | ACTATCAGAGACCACCGAAGGGAGCCCCGCCACAACAACGGCGATTaGATCAAAGAAGGTGGAGTGTGGTGCGGAGACAAAGATGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TIRDHRREPRHNNGD*IKEGGVWCGDKDGG Trigger: GCCCCCATCTTTGTCTCCGCACCACACTCCACCTTCTTTGATGCAATCGCCGTTGTTGTGGCGGGGCTCCCTTCGGTGGTCTCTGATAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 90 bp | CCACTGCCGGAGGATATAAGGACTTGTTCACCTCCTGCGCAGTCCTaGTGTCCCACACCTCCACCTCTGTGGAGTCTATGGTATCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLPEDIRTCSPPAQS*CPTPPPLWSLWYPG Trigger: ACCAGGATACCATAGACTCCACAGAGGTGGAGGTGTGGGACAGCAGGACTGCGCAGGAGGTGAACAAGTCCTTATATCCTCCGGCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 90 bp | AAGGGACTGTCCACTGCCGGAGGATATAAGGACTTGTTCACCTCCTaGGCAGTCCTGCTGTCCCACACCTCCACCTCTGTGGAGTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: KGLSTAGGYKDLFTS*AVLLSHTSTSVESM Trigger: CATAGACTCCACAGAGGTGGAGGTGTGGGACAGCAGGACTGCGCAGGAGGTGAACAAGTCCTTATATCCTCCGGCAGTGGACAGTCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 90 bp | GAGCCCCGCCACAACAACGGCGATTGCATCAAAGAAGGTGGAGTGTaGTGCGGAGACAAAGATGGGGGCCTCCTCTCTGGTAGCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EPRHNNGDCIKEGGV*CGDKDGGLLSGSLF Trigger: AAAAAGGCTACCAGAGAGGAGGCCCCCATCTTTGTCTCCGCACCACACTCCACCTTCTTTGATGCAATCGCCGTTGTTGTGGCGGGGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 90 bp | TTTCACAAGCACAGGCTGAGTTACCAGGATGCATTTCCCAGCCAATaGGACCCTCGCAAGCTGACTATCAGAGACCACCGAAGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FHKHRLSYQDAFPSQ*DPRKLTIRDHRREP Trigger: GGGCTCCCTTCGGTGGTCTCTGATAGTCAGCTTGCGAGGGTCCCATTGGCTGGGAAATGCATCCTGGTAACTCAGCCTGTGCTTGTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 90 bp | TTTGGTAGGTTGAGTAGGCAAGTTAATGGCGGAGAGTACGGCCACTaGCCAGAGAAGGATGAGGAGGAAGACAATGCAGGACACCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FGRLSRQVNGGEYGH*PEKDEEEDNAGHPH Trigger: GTGCGGGTGTCCTGCATTGTCTTCCTCCTCATCCTTCTCTGGCCAGTGGCCGTACTCTCCGCCATTAACTTGCCTACTCAACCTACCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 90 bp | AATTCGGGTCTTCTCGTTTCACAAGCACAGGCTGAGTTACCAGGATaGATTTCCCAGCCAATGGGACCCTCGCAAGCTGACTATCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NSGLLVSQAQAELPG*ISQPMGPSQADYQR Trigger: TCTCTGATAGTCAGCTTGCGAGGGTCCCATTGGCTGGGAAATGCATCCTGGTAACTCAGCCTGTGCTTGTGAAACGAGAAGACCCGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS TCA 90 bp | GACTTTATCAGATGTTTCCTCCATCTCCTTATGGGTTTGGTAGGTTaGGTAGGCAAGTTAATGGCGGAGAGTACGGCCACTGGCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DFIRCFLHLLMGLVG*VGKLMAESTATGQR Trigger: TCTCTGGCCAGTGGCCGTACTCTCCGCCATTAACTTGCCTACTCAACCTACCAAACCCATAAGGAGATGGAGGAAACATCTGATAAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS TCA 90 bp | GCTGGATGCTTCAGGGCAAACCTCCGAAAAGTTCTGTATGAAACCTaGTCTGAATCCTTGCCAGCCATCTGCTGGAAGAGTGTGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: AGCFRANLRKVLYET*SESLPAICWKSVET Trigger: TGTTTCCACACTCTTCCAGCAGATGGCTGGCAAGGATTCAGATCAGGTTTCATACAGAACTTTTCGGAGGTTTGCCCTGAAGCATCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 90 bp | ACAGTCTTCCAAGCTGTGATCGGTTACAGGCAGCTTCAAAGCGTTTaGCATCTTGATTCGGACTGTGTTGGCAAAAAGGATGGGGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TVFQAVIGYRQLQSV*HLDSDCVGKKDGVF Trigger: AAAGACCCCATCCTTTTTGCCAACACAGTCCGAATCAAGATGGCAAACGCTTTGAAGCTGCCTGTAACCGATCACAGCTTGGAAGACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 90 bp | ACAGGAGCGGTTGGTGCACAATCCTTCCGGAAAAATCAGAATCTGTaGCCACTTCATTTTAGATTTCACTCGTCTGAGGATTTCATTCCG | + |
|
Preference number: 5 (lower is better) Translates to: TGAVGAQSFRKNQNL*PLHFRFHSSEDFIP Trigger: CGGAATGAAATCCTCAGACGAGTGAAATCTAAAATGAAGTGGCCACAGATTCTGATTTTTCCGGAAGGATTGTGCACCAACCGCTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CAA 90 bp | AAGAATTGTCTCCATCAGACCAGCCTGTGGACAAGTCAGTGGTACATTTTCTTGTTGATTCGGACTGTGTaGGCAAAAAGGATGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KNCLHQTSLWTSQWYIFLLIRTV*AKRMGS Trigger: AGACCCCATCCTTTTTGCCAACACAGTCCGAATCAA...CAAGAAAATGTACCACTGACTTGTCCACAGGCTGGTCTGATGGAGACAATTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CAA 90 bp | ACCCAAGTTGCTTTTTCCAAGACAGTATCCATGTTACTTAGAGTAAAAACCACTGGAGGATATAAGGACTaGTTCACCTCCTGCGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TQVAFSKTVSMLLRVKTTGGYKD*FTSCAV Trigger: GACTGCGCAGGAGGTGAACAAGTCCTTATATCCTCC...AGTGGTTTTTACTCTAAGTAACATGGATACTGTCTTGGAAAAAGCAACTTGGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CAA 90 bp | AAGAATTGTCTCCATCAGACCAGCCTGTGGACAAGTCAGTGGTACATTTTCTTGTCAAGGGCTCTGAAATaGGGAGTTTTAAATAACGTG | + |
|
Preference number: 5 (lower is better) Translates to: KNCLHQTSLWTSQWYIFLSRALK*GVLNNV Trigger: CACGTTATTTAAAACTCCCAATTTCAGAGCCCTTGA...CAAGAAAATGTACCACTGACTTGTCCACAGGCTGGTCTGATGGAGACAATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 90 bp | AGTATATATAGGCTGCCTGGAGATCTATGTATGAATGAAATAATTTaGCATATGCTGGATGCTTCAGGGCAAACCTCCGAAAAGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SIYRLPGDLCMNEII*HMLDASGQTSEKFC Trigger: ACAGAACTTTTCGGAGGTTTGCCCTGAAGCATCCAGCATATGCCAAATTATTTCATTCATACATAGATCTCCAGGCAGCCTATATATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS-3UTR CAA 90 bp | AAGTCTAAGTCTGTTTGCTTGGTTGTAAAGCCTTGTTTCTGCTTCTTATTTACTGTAGCCTTTTTCCCTTaGACCTTAACCAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSKSVCLVVKPCFCFLFTVAFFP*TLTRNP Trigger: TGGGTTCCTGGTTAAGGTCAAAGGGAAAAAGGCTAC...AGTAAATAAGAAGCAGAAACAAGGCTTTACAACCAAGCAAACAGACTTAGACTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 72 bp | GCCCCGCCACAACAACGGCGATTGCATCAAAGAAGGTaGAGTGTGGTGCGGAGACAAAGATGGGGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: APPQQRRLHQRR*SVVRRQRWGPP Trigger: AGGAGGCCCCCATCTTTGTCTCCGCACCACACTCCACCTTCTTTGATGCAATCGCCGTTGTTGTGGCGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 90 bp | GACTATCAGAGACCACCGAAGGGAGCCCCGCCACAACAACGGCGATaGCATCAAAGAAGGTGGAGTGTGGTGCGGAGACAAAGATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: DYQRPPKGAPPQQRR*HQRRWSVVRRQRWG Trigger: CCCCCATCTTTGTCTCCGCACCACACTCCACCTTCTTTGATGCAATCGCCGTTGTTGTGGCGGGGCTCCCTTCGGTGGTCTCTGATAGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 72 bp | TCCACTGCCGGAGGATATAAGGACTTGTTCACCTCCTaGGCAGTCCTGCTGTCCCACACCTCCACCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: STAGGYKDLFTS*AVLLSHTSTSV Trigger: CACAGAGGTGGAGGTGTGGGACAGCAGGACTGCGCAGGAGGTGAACAAGTCCTTATATCCTCCGGCAGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 72 bp | CCTGCGCAGTCCTGCTGTCCCACACCTCCACCTCTGTaGAGTCTATGGTATCCTGGTGCTGGTTCTGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: PAQSCCPTPPPL*SLWYPGAGSDE Trigger: CTCATCAGAACCAGCACCAGGATACCATAGACTCCACAGAGGTGGAGGTGTGGGACAGCAGGACTGCGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 72 bp | GTGAAGGGACTGTCCACTGCCGGAGGATATAAGGACTaGTTCACCTCCTGCGCAGTCCTGCTGTCCCACACC | + |
|
Preference number: 6 (lower is better) Translates to: VKGLSTAGGYKD*FTSCAVLLSHT Trigger: GGTGTGGGACAGCAGGACTGCGCAGGAGGTGAACAAGTCCTTATATCCTCCGGCAGTGGACAGTCCCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 90 bp | GTGTTGAGAGTGAAGGGACTGTCCACTGCCGGAGGATATAAGGACTaGTTCACCTCCTGCGCAGTCCTGCTGTCCCACACCTCCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLRVKGLSTAGGYKD*FTSCAVLLSHTSTS Trigger: AGAGGTGGAGGTGTGGGACAGCAGGACTGCGCAGGAGGTGAACAAGTCCTTATATCCTCCGGCAGTGGACAGTCCCTTCACTCTCAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 72 bp | AACCCATTCCAAGTCCAGGTCACTGTGTCCAGGCTGTaGGGGTACCTAAGCAGCACTGGCTGCACAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: NPFQVQVTVSRL*GYLSSTGCTGT Trigger: TGTCCCTGTGCAGCCAGTGCTGCTTAGGTACCCCAACAGCCTGGACACAGTGACCTGGACTTGGAATGGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 72 bp | GAGGATATAAGGACTTGTTCACCTCCTGCGCAGTCCTaGTGTCCCACACCTCCACCTCTGTGGAGTCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: EDIRTCSPPAQS*CPTPPPLWSLW Trigger: CCATAGACTCCACAGAGGTGGAGGTGTGGGACAGCAGGACTGCGCAGGAGGTGAACAAGTCCTTATATCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 72 bp | CACAACAACGGCGATTGCATCAAAGAAGGTGGAGTGTaGTGCGGAGACAAAGATGGGGGCCTCCTCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HNNGDCIKEGGV*CGDKDGGLLSG Trigger: ACCAGAGAGGAGGCCCCCATCTTTGTCTCCGCACCACACTCCACCTTCTTTGATGCAATCGCCGTTGTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 72 bp | CACAGGCTGAGTTACCAGGATGCATTTCCCAGCCAATaGGACCCTCGCAAGCTGACTATCAGAGACCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: HRLSYQDAFPSQ*DPRKLTIRDHR Trigger: TCGGTGGTCTCTGATAGTCAGCTTGCGAGGGTCCCATTGGCTGGGAAATGCATCCTGGTAACTCAGCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 72 bp | CTTCTCGTTTCACAAGCACAGGCTGAGTTACCAGGATaGATTTCCCAGCCAATGGGACCCTCGCAAGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LLVSQAQAELPG*ISQPMGPSQAD Trigger: GTCAGCTTGCGAGGGTCCCATTGGCTGGGAAATGCATCCTGGTAACTCAGCCTGTGCTTGTGAAACGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 72 bp | TTGAGTAGGCAAGTTAATGGCGGAGAGTACGGCCACTaGCCAGAGAAGGATGAGGAGGAAGACAATGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSRQVNGGEYGH*PEKDEEEDNAG Trigger: TCCTGCATTGTCTTCCTCCTCATCCTTCTCTGGCCAGTGGCCGTACTCTCCGCCATTAACTTGCCTACTCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS TCA 72 bp | GAGCTGACTCAGAGTAAGCATACATACCTGGAAGCCTaGGAACCCATTCCAAGTCCAGGTCACTGTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELTQSKHTYLEA*EPIPSPGHCVQ Trigger: CTGGACACAGTGACCTGGACTTGGAATGGGTTCTCAGGCTTCCAGGTATGTATGCTTACTCTGAGTCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 90 bp | CGACTTTATCAGATGTTTCCTCCATCTCCTTATGGGTTTGGTAGGTaGAGTAGGCAAGTTAATGGCGGAGAGTACGGCCACTGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLYQMFPPSPYGFGR*SRQVNGGEYGHWPE Trigger: CTCTGGCCAGTGGCCGTACTCTCCGCCATTAACTTGCCTACTCAACCTACCAAACCCATAAGGAGATGGAGGAAACATCTGATAAAGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS TCA 72 bp | AGATGTTTCCTCCATCTCCTTATGGGTTTGGTAGGTTaGGTAGGCAAGTTAATGGCGGAGAGTACGGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RCFLHLLMGLVG*VGKLMAESTAT Trigger: AGTGGCCGTACTCTCCGCCATTAACTTGCCTACTCAACCTACCAAACCCATAAGGAGATGGAGGAAACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS TCA 72 bp | GATCGGTTACAGGCAGCTTCAAAGCGTTTGCCATCTTaGTTCGGACTGTGTTGGCAAAAAGGATGGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DRLQAASKRLPS*FGLCWQKGWGL Trigger: AAGACCCCATCCTTTTTGCCAACACAGTCCGAATCAAGATGGCAAACGCTTTGAAGCTGCCTGTAACCGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 72 bp | CAAGCTGTGATCGGTTACAGGCAGCTTCAAAGCGTTTaGCATCTTGATTCGGACTGTGTTGGCAAAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QAVIGYRQLQSV*HLDSDCVGKKD Trigger: ATCCTTTTTGCCAACACAGTCCGAATCAAGATGGCAAACGCTTTGAAGCTGCCTGTAACCGATCACAGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 72 bp | AAGGCTCCTAGTTTAAAAGTGACGAGACAGGAGCGGTaGGTGCACAATCCTTCCGGAAAAATCAGAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KAPSLKVTRQER*VHNPSGKIRIC Trigger: ACAGATTCTGATTTTTCCGGAAGGATTGTGCACCAACCGCTCCTGTCTCGTCACTTTTAAACTAGGAGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 72 bp | ATGACATTTGCAGAATCTTCTCCGTATTGGATGGGTTaGACAGGACAGTTAGACCTATCACATACTCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: MTFAESSPYWMG*TGQLDLSHTLG Trigger: TCCGAGAGTATGTGATAGGTCTAACTGTCCTGTGCAACCCATCCAATACGGAGAAGATTCTGCAAATGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS GCA 72 bp | TCCGAAAAGTTCTGTATGAAACCTGATCTGAATCCTTaGCAGCCATCTGCTGGAAGAGTGTGGAAACATCTA | + |
|
Preference number: 6 (lower is better) Translates to: SEKFCMKPDLNP*QPSAGRVWKHL Trigger: TAGATGTTTCCACACTCTTCCAGCAGATGGCTGGCAAGGATTCAGATCAGGTTTCATACAGAACTTTTCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CCA 72 bp | AGGCTGCCTGGAGATCTATGTATGAATGAAATAATTTaGCATATGCTGGATGCTTCAGGGCAAACCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLPGDLCMNEII*HMLDASGQTSE Trigger: TTCGGAGGTTTGCCCTGAAGCATCCAGCATATGCCAAATTATTTCATTCATACATAGATCTCCAGGCAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 72 bp | AATGACATTTGCAGAATCTTCTCCGTATTGGATGGGTaGCACAGGACAGTTAGACCTATCACATACTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: NDICRIFSVLDG*HRTVRPITYSR Trigger: CCGAGAGTATGTGATAGGTCTAACTGTCCTGTGCAACCCATCCAATACGGAGAAGATTCTGCAAATGTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||
| CDS CAA 72 bp | AAAAGTTTAAATGACATTTGCAGAATCTTCTCCGTATaGGATGGGTTGCACAGGACAGTTAGACCTATCACA | + |
|
Preference number: 6 (lower is better) Translates to: KSLNDICRIFSV*DGLHRTVRPIT Trigger: TGTGATAGGTCTAACTGTCCTGTGCAACCCATCCAATACGGAGAAGATTCTGCAAATGTCATTTAAACTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166599.2 |
||