Pregenerated sensors for LPCAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021608Ensembl transcript IDs: ENSMUST00000022099.15, ENSMUST00000123766.8, ENSMUST00000147566.8, ENSMUST00000223060.2
Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGGGAGGCCCCGAGCAGCCGCCCGCCCGCCTGCCTGCCTGCAATaGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: TGRPRAAARPPACLQ*ADGTHIQLPCKCPA Trigger: AGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGGCGGCTGCTCGGGGCCTCCCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR TCA 90 bp | AAGGCGCAACACACAATCAGGCTCCAGGCCACTGGAGGCAGGTGGTaGTGCGGGAGGGGCCTCATCCCTCCGGAATCTTCCATTCTAGTC | + |
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Preference number: 1 (lower is better) Translates to: KAQHTIRLQATGGRW*CGRGLIPPESSILV Trigger: GACTAGAATGGAAGATTCCGGAGGGATGAGGCCCCTCCCGCATCACCACCTGCCTCCAGTGGCCTGGAGCCTGATTGTGTGTTGCGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR TCA 90 bp | TTCTGCCAGAGCCAGCTGGCAGTCCTCAAATGTATAGTCGGTTACTaGGACACCCAGGGCCTTGGCCATGACACGCCTCACATTGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: FCQSQLAVLKCIVGY*DTQGLGHDTPHIAG Trigger: GCCAGCAATGTGAGGCGTGTCATGGCCAAGGCCCTGGGTGTCTCAGTAACCGACTATACATTTGAGGACTGCCAGCTGGCTCTGGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR CCA 90 bp | AAAGCCACCTACGCTCAGATGGTGGCTGCTTTCCCTAAGTCACCATaGCAACCAGTGCAAAGAGAGGGTGATGGGCTTTGGGCAGGACCT | + |
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Preference number: 1 (lower is better) Translates to: KATYAQMVAAFPKSP*QPVQREGDGLWAGP Trigger: AGGTCCTGCCCAAAGCCCATCACCCTCTCTTTGCACTGGTTGCCATGGTGACTTAGGGAAAGCAGCCACCATCTGAGCGTAGGTGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR CCA 90 bp | TGTGCCCGTCGCTTGATCTCCTCCACTGTCTTCCTTCGCGAGTCCTaGTCAGAGCGGGACACGAACACTGGCCTGATGTATCTTATCAGA | + |
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Preference number: 1 (lower is better) Translates to: CARRLISSTVFLRES*SERDTNTGLMYLIR Trigger: TCTGATAAGATACATCAGGCCAGTGTTCGTGTCCCGCTCTGACCAGGACTCGCGAAGGAAGACAGTGGAGGAGATCAAGCGACGGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
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| 3UTR TCA 90 bp | AAACCAGGTAATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCTaGTCTCATGAAGGGCCAAGCACAGCAAACTCTGTGGCCTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: KPGNAEGDSLDPVPS*SHEGPSTANSVACP Trigger: GGGACAGGCCACAGAGTTTGCTGTGCTTGGCCCTTCATGAGATCAGGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATTACCTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR CCA 90 bp | GAACATCCGTCCCAGGTCTGCTCAGGATTCCTTCAACATGACCAGTaGCCATTCCTCAGGAATCCATCACTTGCAGATGGCAGGGCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: EHPSQVCSGFLQHDQ*PFLRNPSLADGRAE Trigger: CTCTGCCCTGCCATCTGCAAGTGATGGATTCCTGAGGAATGGCCACTGGTCATGTTGAAGGAATCCTGAGCAGACCTGGGACGGATGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR CCA 90 bp | GGAGATCCGTACATCTTGAATGCCAGCTGGATGGTGGCTAAGGTCTaGGATGGCCTGCACACCACAGACAAGGCGACCACATATTCACGA | + |
|
Preference number: 1 (lower is better) Translates to: GDPYILNASWMVAKV*DGLHTTDKATTYSR Trigger: TCGTGAATATGTGGTCGCCTTGTCTGTGGTGTGCAGGCCATCCCAGACCTTAGCCACCATCCAGCTGGCATTCAAGATGTACGGATCTCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR TCA 90 bp | CAGAAATCCATCTCCCTGCCCATCCCGCGGCAGTGTGGCGCTGTGTaGCTGAGGTTGACAAGTTTTGTTTATGTGACCTCTCTTGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: QKSISLPIPRQCGAV*LRLTSFVYVTSLGE Trigger: TTCCCCAAGAGAGGTCACATAAACAAAACTTGTCAACCTCAGTCACACAGCGCCACACTGCCGCGGGATGGGCAGGGAGATGGATTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR GCA 90 bp | TTCCAGGGAGGGTATGTGCAGCGCACGCACAGAGGTCCTGCATTGTaGACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCAA | + |
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Preference number: 1 (lower is better) Translates to: FQGGYVQRTHRGPAL*TPHKQRGERQTQTQ Trigger: TTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTGTGCGTGCGCTGCACATACCCTCCCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR CCA 90 bp | GCTAAGAGCTCAGAAATCCATCTCCCTGCCCATCCCGCGGCAGTGTaGCGCTGTGTGACTGAGGTTGACAAGTTTTGTTTATGTGACCTC | + |
|
Preference number: 1 (lower is better) Translates to: AKSSEIHLPAHPAAV*RCVTEVDKFCLCDL Trigger: GAGGTCACATAAACAAAACTTGTCAACCTCAGTCACACAGCGCCACACTGCCGCGGGATGGGCAGGGAGATGGATTTCTGAGCTCTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR GCA 90 bp | GAAGTCAATGCAGAAGCCATTGGGAGTTGGTGCTGGGGGTGTCTGTaGACAGCTGTCGAAATGTGTCTGATCAGGGTACAAGTAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: EVNAEAIGSWCWGCL*TAVEMCLIRVQVVL Trigger: GAGGACTACTTGTACCCTGATCAGACACATTTCGACAGCTGTGCACAGACACCCCCAGCACCAACTCCCAATGGCTTCTGCATTGACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR TCA 90 bp | ACCACCACTCTCGTCAAAAAGCGAGAACATGTCTTCCAGTGCATCTaGGACAGGAACTTCCAAGTAGGCCGCAAACTCTGGAAGGCGGAT | + |
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Preference number: 1 (lower is better) Translates to: TTTLVKKREHVFQCI*DRNFQVGRKLWKAD Trigger: ATCCGCCTTCCAGAGTTTGCGGCCTACTTGGAAGTTCCTGTCTCAGATGCACTGGAAGACATGTTCTCGCTTTTTGACGAGAGTGGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR TCA 90 bp | GGAACAAGTCGGTCACTGTTAATTCTGATACACCCAGTGCAGTCTTaGGGATGCAGGACAGGTTGGCCTCATCTATGCTGCCATCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GTSRSLLILIHPVQS*GCRTGWPHLCCHPQ Trigger: CTGAGGATGGCAGCATAGATGAGGCCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGTATCAGAATTAACAGTGACCGACTTGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR GCA 90 bp | TCCTTCTGGAAAAATCATTATCTGAGGCCACTTTCCATTCGACTGTaGCCGTCGCTTGATCTCCTCCACTGTCTTCCTTCGCGAGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SFWKNHYLRPLSIRL*PSLDLLHCLPSRVL Trigger: CAGGACTCGCGAAGGAAGACAGTGGAGGAGATCAAGCGACGGGCACAGTCGAATGGAAAGTGGCCTCAGATAATGATTTTTCCAGAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR GCA 90 bp | TGCACAGCTGTCGAAATGTGTCTGATCAGGGTACAAGTAGTCCTCTaGGTAGTCGGGGTACATTTCCGCAAACCCGCAGAAGTCATCAAA | + |
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Preference number: 1 (lower is better) Translates to: CTAVEMCLIRVQVVL*VVGVHFRKPAEVIK Trigger: TTTGATGACTTCTGCGGGTTTGCGGAAATGTACCCCGACTACGCAGAGGACTACTTGTACCCTGATCAGACACATTTCGACAGCTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR TCA 90 bp | GATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCCTaGGACAGACTTTACAGAAAACAAATAACATCACAAGTCTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: DGTHIQLPCKCPAGP*DRLYRKQITSQVSW Trigger: CCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR CCA 90 bp | ATGGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTaGGCCCTGAGACAGACTTTACAGAAAACAAATAACATCACAAGT | + |
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Preference number: 1 (lower is better) Translates to: MGRWDTHTASLQMPS*ALRQTLQKTNNITS Trigger: ACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR TCA 90 bp | TCAGAAGGGCAATACACAGGCAGAAATTCAATTTCCACTTGGTTTTaGAACTGGCACAGAGTGAGCCACAGGATTTTCAACGCTCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: SEGQYTGRNSISTWF*NWHRVSHRIFNAPG Trigger: ACCTGGAGCGTTGAAAATCCTGTGGCTCACTCTGTGCCAGTTTCAAAACCAAGTGGAAATTGAATTTCTGCCTGTGTATTGCCCTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR TCA 90 bp | TCCATTCTAGTCCGCTTTCTTACAAGAATTCTTTCTCCCAAAGTCTaGGTTCTCAGGGCTGAAGTCAATGCAGAAGCCATTGGGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: SILVRFLTRILSPKV*VLRAEVNAEAIGSW Trigger: CCAACTCCCAATGGCTTCTGCATTGACTTCAGCCCTGAGAACTCAGACTTTGGGAGAAAGAATTCTTGTAAGAAAGCGGACTAGAATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR CCA 90 bp | CGCTGTGTGACTGAGGTTGACAAGTTTTGTTTATGTGACCTCTCTTaGGGAAAGCACATACTGACACTCCCTCTGAGAAACTCAGAAAAC | + |
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Preference number: 1 (lower is better) Translates to: RCVTEVDKFCLCDLS*GKHILTLPLRNSEN Trigger: GTTTTCTGAGTTTCTCAGAGGGAGTGTCAGTATGTGCTTTCCCCAAGAGAGGTCACATAAACAAAACTTGTCAACCTCAGTCACACAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR CCA 90 bp | AAGTCATCAAAGGTGATTCTTCCCTTGTCCTCTTGGTCAATAGCCTaGAACAAGTCGGTCACTGTTAATTCTGATACACCCAGTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: KSSKVILPLSSWSIA*NKSVTVNSDTPSAV Trigger: GACTGCACTGGGTGTATCAGAATTAACAGTGACCGACTTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAGAATCACCTTTGATGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGGCGCCCGCAGACAGGGCGGGCACTGCCCCTTCCCCTGCCCGGTATGTACAAGCCGCCCGCCCGCCTaGCTGCCTGCAATGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KGARRQGGHCPFPCPVCTSRPPA*LPAMGR Trigger: TCTGCCCATTGCAGGCAGGCAGGCGGGCGGGCGGCT...TGTACATACCGGGCAGGGGAAGGGGCAGTGCCCGCCCTGTCTGCGGGCGCCTTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCGCCCGCAGACAGGGCGGGCACTGCCCCTTCCCCTGCCCGGTATGTACAATGGGAGCAGGGCAGTaGGGCCCCTTACGCTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: KGARRQGGHCPFPCPVCTMGAGQ*GPLRCG Trigger: GCCGCAGCGTAAGGGGCCTCACTGCCCTGCTCCCAT...TGTACATACCGGGCAGGGGAAGGGGCAGTGCCCGCCCTGTCTGCGGGCGCCTTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGCCCGCCTGCCTGCCTGCAATGGGCAGATGGGACACACATACAGCTTCCCTCAGCCTGTGGAGTCCTaGCCCACAGGGAGGCCCCGA | + |
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Preference number: 2 (lower is better) Translates to: PARLPACNGQMGHTYSFPQPVES*PTGRPR Trigger: TCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTG...AGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGAGCAGCCGCCCTGCCTGCCTGCAATaGGCAGATGGGACACACATA | + |
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Preference number: 2 (lower is better) Translates to: CAHSACGVLPHREAPSSRPACLQ*ADGTHI Trigger: TATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGG...GCGGCTGCTCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGAGCAGCCCCTGCCTGCCTGCAATaGGCAGATGGGACACACATA | + |
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Preference number: 2 (lower is better) Translates to: PVPTQPVESCPTGRPRAAPACLQ*ADGTHI Trigger: TATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGG...GGCTGCTCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCCCCTTCAGCTGTCACCCCCACAGAGTAAAGCCACCTACGCTCAGATGGGCCCGCCCGCCTGCCTaGCTGCAATGGGCAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: PVPFSCHPHRVKPPTLRWARPPA*LQWADG Trigger: CCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGGC...CCATCTGAGCGTAGGTGGCTTTACTCTGTGGGGGTGACAGCTGAAGGGGACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGAGCAGCCGCCCTGCAATGGGCAGATaGGACACACATACAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CAHSACGVLPHREAPSSRPAMGR*DTHTAS Trigger: GGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGG...GCGGCTGCTCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR CCA 90 bp | CCCGCCCGCCTGCCTGCCTGCAATGGGCAGATGGGACACACATACAGCTTCCCTTGCCCACTCAGCCTGTaGAGTCCTGCCCCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PARLPACNGQMGHTYSFPCPLSL*SPAPQG Trigger: TCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCA...AGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGGGAGGGTATGTGCAGCGCACGCACAGAGGTCCTGCATTGTGCACACCGACTGGAGGCAGGTGGTaGTGCGGGAGGGGCCTCATC | + |
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Preference number: 2 (lower is better) Translates to: FQGGYVQRTHRGPALCTPTGGRW*CGRGLI Trigger: GATGAGGCCCCTCCCGCATCACCACCTGCCTCCAGT...CGGTGTGCACAATGCAGGACCTCTGTGCGTGCGCTGCACATACCCTCCCTGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR CCA 90 bp | TATTCCACTGAAAACCTGAAGCCCGCACCCCAAAGGCGCCCGCAGACAGGGCGGGAGGGTGATGGGCTTTaGGCAGGACCTCCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: YSTENLKPAPQRRPQTGREGDGL*AGPPGL Trigger: AAGGCCAGGAGGTCCTGCCCAAAGCCCATCACCCTC...CCGCCCTGTCTGCGGGCGCCTTTGGGGTGCGGGCTTCAGGTTTTCAGTGGAATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR GCA 90 bp | TATTCCACTGAAAACCTGAAGCCCGCACCCCAAAGGCGCCCGCAGACAGGGCGGAGGTCTGGGATGGCCTaGACACCACAGACAAGGCGA | + |
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Preference number: 2 (lower is better) Translates to: YSTENLKPAPQRRPQTGRRSGMA*TPQTRR Trigger: TCGCCTTGTCTGTGGTGTGCAGGCCATCCCAGACCT...CCGCCCTGTCTGCGGGCGCCTTTGGGGTGCGGGCTTCAGGTTTTCAGTGGAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCGTATTCTAGGTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGCAGGCTCCAGGCCACTaGAGGCAGGTGGTGATGCGG | + |
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Preference number: 2 (lower is better) Translates to: QRILGEHTAIPVPTQPVEQAPGH*RQVVMR Trigger: CCGCATCACCACCTGCCTCCAGTGGCCTGGAGCCTG...CTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGATGAACATCCGTCCCAGGTCTGCTCAGGATTCCTTCAACATGACCAGTAGCCGCCCGCCCGCCTaGCTGCCTGCAATGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: RRMNIRPRSAQDSFNMTSSRPPA*LPAMGR Trigger: TCTGCCCATTGCAGGCAGGCAGGCGGGCGGGCGGCT...ACTGGTCATGTTGAAGGAATCCTGAGCAGACCTGGGACGGATGTTCATCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAAACGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: STQPYLCPLSLWSPAPQGNAPGP*HVHVMV Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGTT...TCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCACCATGGCAACCAGTGCAAAGAGAGGGTGATGGGCTTTGGGCAGGACCTCTGCCCACTCAGCCTGTaGAGTCCTGCCCCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: SHHGNQCKERVMGFGQDLCPLSL*SPAPQG Trigger: TCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCA...GAGGTCCTGCCCAAAGCCCATCACCCTCTCTTTGCACTGGTTGCCATGGTGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCGCCCGCAGACAGGGCGGGCACTGCCCCTTCCCCTGCCCGGTATGTACATTCTTTCCCTCTGGCTaGCTCTTTAACCCACATTCA | + |
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Preference number: 2 (lower is better) Translates to: KGARRQGGHCPFPCPVCTFFPSG*LFNPHS Trigger: TGAATGTGGGTTAAAGAGTCAGCCAGAGGGAAAGAA...TGTACATACCGGGCAGGGGAAGGGGCAGTGCCCGCCCTGTCTGCGGGCGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR GCA 90 bp | TCAATCTCACCACCACCACTCTCGTCAAAAAGCGAGAACATGTCTTCCAGTGCAGCCCGCCCGCCTGCCTaGCTGCAATGGGCAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: SISPPPLSSKSENMSSSAARPPA*LQWADG Trigger: CCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGGC...TGCACTGGAAGACATGTTCTCGCTTTTTGACGAGAGTGGTGGTGGTGAGATTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
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| 3UTR-3UTR GCA 90 bp | GCAATGGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCACACAGCCATACCTGTaGCCACTCAGCCTGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: AMGRWDTHTASLQMPSWATQPYL*PLSLWS Trigger: ACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGT...GGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGAGAAAACAGCTTTCCTaGATTTACTGGCTTGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SHTCAHSACGVLPHREAPRKQLS*IYWLGG Trigger: ACCACCAAGCCAGTAAATGCAGGAAAGCTGTTTTCT...CGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGCTGCATTTACTGGCTTaGTGGTCATTTCCTATAGCA | + |
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Preference number: 2 (lower is better) Translates to: SHTCAHSACGVLPHREAPLHLLA*WSFPIA Trigger: TGCTATAGGAAATGACCACCAAGCCAGTAAATGCAG...CGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCACAGCCTGTGGAGTCCTaGCCCACAGGGAGGCCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: SCIVHTAQTKRGKTDTNSQPVES*PTGRPR Trigger: TCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTG...TGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR GCA 90 bp | CCGCCCGCCTGCCTGCCTGCAATGGGCAGATGGGACACACATACAGCTTCCCTGAGATTGGGATGTCTCTaGTCTCTGCCTTCATCACAA | + |
|
Preference number: 2 (lower is better) Translates to: PPACLPAMGRWDTHTASLRLGCL*SLPSSQ Trigger: TTGTGATGAAGGCAGAGAGCAGAGACATCCCAATCT...CAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGTCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACATGCCCACTCAGCCTGTaGAGTCCTGCCCCACAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QRSCIVHTAQTKRGKTDTCPLSL*SPAPQG Trigger: TCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCA...TGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR CAA 90 bp | AGGTTGGCCTCATCTATGCTGCCATCCTCAGGAGATCCGTACATCTaGAATGCCAGCTGGATGGTGGCTAAGGTCTGGGATGGCCTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RLASSMLPSSGDPYI*NASWMVAKVWDGLH Trigger: GTGCAGGCCATCCCAGACCTTAGCCACCATCCAGCTGGCATTCAAGATGTACGGATCTCCTGAGGATGGCAGCATAGATGAGGCCAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR GCA 90 bp | CATACTGACACTCCCTCTGAGAAACTCAGAAAACAGCTTTCCTGCATTTACTGGGCCCGCCCGCCTGCCTaGCTGCAATGGGCAGATGGG | + |
|
Preference number: 2 (lower is better) Translates to: HTDTPSEKLRKQLSCIYWARPPA*LQWADG Trigger: CCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGGC...CCAGTAAATGCAGGAAAGCTGTTTTCTGAGTTTCTCAGAGGGAGTGTCAGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR CAA 90 bp | GATTCCTTCAACATGACCAGTGGCCATTCCTCAGGAATCCATCACTaGCAGATGGCAGGGCAGAGCCCAAGCCTCGGGACATCTCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: DSFNMTSGHSSGIHH*QMAGQSPSLGTSQF Trigger: GAACTGAGATGTCCCGAGGCTTGGGCTCTGCCCTGCCATCTGCAAGTGATGGATTCCTGAGGAATGGCCACTGGTCATGTTGAAGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCATGACACGCCTCACATTGCTGGCATACAGGGCAGGATTCCTCTTCTCCTCTTGCCCAGCTGGGCCCTaGGACAGACTTTACAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AMTRLTLLAYRAGFLFSSCPAGP*DRLYRK Trigger: TTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCA...AGAGGAGAAGAGGAATCCTGCCCTGTATGCCAGCAATGTGAGGCGTGTCATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCGACCACATATTCACGAAGGTCAATCTCACCACCACCACTCTCGTCAAAAACCAGGGCCTTGGCCATaGCACGCCTCACATTGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RRPHIHEGQSHHHHSRQKPGPWP*HASHCW Trigger: CCAGCAATGTGAGGCGTGTCATGGCCAAGGCCCTGG...TTTTTGACGAGAGTGGTGGTGGTGAGATTGACCTTCGTGAATATGTGGTCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCATGCCCACTCAGCCTGTaGAGTCCTGCCCCACAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SCIVHTAQTKRGKTDTNSCPLSL*SPAPQG Trigger: TCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCA...TGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR CCA 90 bp | TCATCCATACCTAACCAGCTAAGAGCTCAGAAATCCATCTCCCTGCCCATCCCGATGCCAGCTGGATGGTaGCTAAGGTCTGGGATGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SSIPNQLRAQKSISLPIPMPAGW*LRSGMA Trigger: GGCCATCCCAGACCTTAGCCACCATCCAGCTGGCAT...CGGGATGGGCAGGGAGATGGATTTCTGAGCTCTTAGCTGGTTAGGTATGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGGTTTATAAAAGAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAAACTGGAGGCAGGTGGTaGTGCGGGAGGGGCCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: VRFIKESRPPAPTQKHLETGGRW*CGRGLI Trigger: GATGAGGCCCCTCCCGCATCACCACCTGCCTCCAGT...TTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTCTTTTATAAACCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCCATGACACGCCTCACATTGCTGGCATACAGGGCAGGATTCCTCTTCTCCTCCTTGCCACGTCCATGTaGTGGTGTCCAATTTGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GHDTPHIAGIQGRIPLLLLATSM*WCPICL Trigger: CAAACAAATTGGACACCATCACATGGACGTGGCAAG...GAGGAGAAGAGGAATCCTGCCCTGTATGCCAGCAATGTGAGGCGTGTCATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTCATCAGGAGGATGAACATCCGTCCCAGGTCTGCTCAGGATTCCTTCAACCAGGAATCCATCACTTaGAGATGGCAGGGCAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RVIRRMNIRPRSAQDSFNQESIT*RWQGRA Trigger: GGCTCTGCCCTGCCATCTGCAAGTGATGGATTCCTG...GTTGAAGGAATCCTGAGCAGACCTGGGACGGATGTTCATCCTCCTGATGACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTCTGGAAGGCGGATTTTCTCTCCTCTCTTCATCCTCGCACTTTCTGAATATCAGGCTCCAGGCCACTaGAGGCAGGTGGTGATGCGG | + |
|
Preference number: 2 (lower is better) Translates to: NSGRRIFSPLFILALSEYQAPGH*RQVVMR Trigger: CCGCATCACCACCTGCCTCCAGTGGCCTGGAGCCTG...ATATTCAGAAAGTGCGAGGATGAAGAGAGGAGAGAAAATCCGCCTTCCAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCCAGCTGGGCCCTGAGACAGACTTTACAGAAAACAAATAACATCACAAGTCAGGCTCCAGGCCACTaGAGGCAGGTGGTGATGCGG | + |
|
Preference number: 2 (lower is better) Translates to: MPSWALRQTLQKTNNITSQAPGH*RQVVMR Trigger: CCGCATCACCACCTGCCTCCAGTGGCCTGGAGCCTG...ACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGGATGAACATCCGTCCCAGGTCTGCTCAGGATTCCTTCAACATGACCAGTGCACAGCAAACTCTGTaGCCTGTCCCCTTCAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RRMNIRPRSAQDSFNMTSAQQTL*PVPFSC Trigger: ACAGCTGAAGGGGACAGGCCACAGAGTTTGCTGTGC...ACTGGTCATGTTGAAGGAATCCTGAGCAGACCTGGGACGGATGTTCATCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGCACAGCTGTCGAAATGTGTCTGATCAGGGTACAAGTAGTCCTCTGCGTTTCCTTCGCGAGTCCTaGTCAGAGCGGGACACGAAC | + |
|
Preference number: 2 (lower is better) Translates to: SVHSCRNVSDQGTSSPLRFLRES*SERDTN Trigger: GTTCGTGTCCCGCTCTGACCAGGACTCGCGAAGGAA...ACGCAGAGGACTACTTGTACCCTGATCAGACACATTTCGACAGCTGTGCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTCATCAGGAGGATGAACATCCGTCCCAGGTCTGCTCAGGATTCCTTCAACTGCCCAGCTGGGCCCTaGGACAGACTTTACAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RVIRRMNIRPRSAQDSFNCPAGP*DRLYRK Trigger: TTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCA...GTTGAAGGAATCCTGAGCAGACCTGGGACGGATGTTCATCCTCCTGATGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCGTATTCTAGGTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGACACGAACACTGGCCTaGTGTATCTTATCAGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QRILGEHTAIPVPTQPVETRTLA*CILSEF Trigger: GAACTCTGATAAGATACATCAGGCCAGTGTTCGTGT...CTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGTTGGTGCTGGGGGTGTCTGTGCACAGCTGTCGAAATGTGTCTGATCAGGGTGTCTTCCAGTGCATCTaGGACAGGAACTTCCAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: ELVLGVSVHSCRNVSDQGVFQCI*DRNFQV Trigger: TACTTGGAAGTTCCTGTCTCAGATGCACTGGAAGAC...ACCCTGATCAGACACATTTCGACAGCTGTGCACAGACACCCCCAGCACCAACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGGCCTCATCCCTCCGGAATCTTCCATTCTAGTCCGCTTTCTTACAAGAATTCACCCAGTGCAGTCTTaGGGATGCAGGACAGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RGLIPPESSILVRFLTRIHPVQS*GCRTGW Trigger: CCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTG...AATTCTTGTAAGAAAGCGGACTAGAATGGAAGATTCCGGAGGGATGAGGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCAATCTCACCACCACCACTCTCGTCAAAAAGCGAGAACATGTCTTCCAGTGCCCTGCCTGCCTGCAATaGGCAGATGGGACACACATA | + |
|
Preference number: 2 (lower is better) Translates to: VNLTTTTLVKKREHVFQCPACLQ*ADGTHI Trigger: TATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGG...GCACTGGAAGACATGTTCTCGCTTTTTGACGAGAGTGGTGGTGGTGAGATTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGGATGAACATCCGTCCCAGGTCTGCTCAGGATTCCTTCAACATGACCAGTCCACCTACGCTCAGATaGTGGCTGCTTTCCCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RRMNIRPRSAQDSFNMTSPPTLR*WLLSLS Trigger: ACTTAGGGAAAGCAGCCACCATCTGAGCGTAGGTGG...ACTGGTCATGTTGAAGGAATCCTGAGCAGACCTGGGACGGATGTTCATCCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGAGGAAACCAGGTAATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCCAATGCAGAAGCCATTaGGAGTTGGTGCTGGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KKRKPGNAEGDSLDPVPSQCRSH*ELVLGV Trigger: CACCCCCAGCACCAACTCCCAATGGCTTCTGCATTG...GGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATTACCTGGTTTCCTCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR CAA 90 bp | AGCACCACGGGCTGGACAGGAACTCCAGGAATGAACGCACCAGGTTaGAAGGTAATGAGGCAGGTCCTATTTGTACAAGTTCCTTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: STTGWTGTPGMNAPG*KVMRQVLFVQVPSG Trigger: TCCAGAAGGAACTTGTACAAATAGGACCTGCCTCATTACCTTCAAACCTGGTGCGTTCATTCCTGGAGTTCCTGTCCAGCCCGTGGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAAAGAGGAAACCAGGTAATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCCCTGCAATGGGCAGATaGGACACACATACAGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KKRKPGNAEGDSLDPVPSPAMGR*DTHTAS Trigger: GGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGG...GGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATTACCTGGTTTCCTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGATACACCCAGTGCAGTCTTGAGGATGCAGGACAGGTTGGCCTCATCTATGGCGGGACACGAACACTaGCCTGATGTATCTTATCAG | + |
|
Preference number: 2 (lower is better) Translates to: SDTPSAVLRMQDRLASSMAGHEH*PDVSYQ Trigger: CTGATAAGATACATCAGGCCAGTGTTCGTGTCCCGC...CATAGATGAGGCCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGTATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR CAA 90 bp | GTTAATTCTGATACACCCAGTGCAGTCTTGAGGATGCAGGACAGGTaGGCCTCATCTATGCTGCCATCCTCAGGAGATCCGTACATCTTG | + |
|
Preference number: 2 (lower is better) Translates to: VNSDTPSAVLRMQDR*ASSMLPSSGDPYIL Trigger: CAAGATGTACGGATCTCCTGAGGATGGCAGCATAGATGAGGCCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGTATCAGAATTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CAA 90 bp | TGGAACAAGTCGGTCACTGTTAATTCTGATACACCCAGTGCAGTCTaGAGGATGCAGGACAGGTTGGCCTCATCTATGCTGCCATCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: WNKSVTVNSDTPSAV*RMQDRLASSMLPSS Trigger: TGAGGATGGCAGCATAGATGAGGCCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGTATCAGAATTAACAGTGACCGACTTGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGGTCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAGATGTCTCTGCTCTCTaGCTTCATCACAATGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QRSCIVHTAQTKRGKTDTDVSAL*LHHNGG Trigger: TCCTCCATTGTGATGAAGGCAGAGAGCAGAGACATC...TGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACAAACAAAGAGGGGAAAGACAGACACAAACTCAAGACCAGCGTATTCTAGGTGCCCAGCTGGGCCCTaGGACAGACTTTACAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: AQTKRGKTDTNSRPAYSRCPAGP*DRLYRK Trigger: TTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCA...CCTAGAATACGCTGGTCTTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR GCA 90 bp | CATACTGACACTCCCTCTGAGAAACTCAGAAAACAGCTTTCCTGCATTTACTGGCACCATGGCAACCAGTaGAAAGAGAGGGTGATGGGC | + |
|
Preference number: 2 (lower is better) Translates to: HTDTPSEKLRKQLSCIYWHHGNQ*KERVMG Trigger: GCCCATCACCCTCTCTTTGCACTGGTTGCCATGGTG...CCAGTAAATGCAGGAAAGCTGTTTTCTGAGTTTCTCAGAGGGAGTGTCAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGGTTTATAAAAGAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAACCTGCCTGCCTGCAATaGGCAGATGGGACACACATA | + |
|
Preference number: 2 (lower is better) Translates to: VRFIKESRPPAPTQKHLEPACLQ*ADGTHI Trigger: TATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGG...TTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTCTTTTATAAACCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAACTCTGGAAGGCGGATTTTCTCTCCTCTCTTCATCCTCGCACTTTCTGAATCAGAGTTCCCCAGATTaGGATGTCTCTGCTCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: QTLEGGFSLLSSSSHFLNQSSPD*DVSALC Trigger: GCAGAGAGCAGAGACATCCCAATCTGGGGAACTCTG...ATTCAGAAAGTGCGAGGATGAAGAGAGGAGAGAAAATCCGCCTTCCAGAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR CCA 90 bp | CATACTGACACTCCCTCTGAGAAACTCAGAAAACAGCTTTCCTGCATTTACTGGGTAGGCCGCAAACTCTaGAAGGCGGATTTTCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: HTDTPSEKLRKQLSCIYWVGRKL*KADFLS Trigger: GGAGAGAAAATCCGCCTTCCAGAGTTTGCGGCCTAC...CCAGTAAATGCAGGAAAGCTGTTTTCTGAGTTTCTCAGAGGGAGTGTCAGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGCTACAAAGGCTGTGTTCACATTTCATCCATACCTAACCAGCTAAGAGCTTGGCCTCATCTATGCTaGCATCCTCAGGAGATCCGT | + |
|
Preference number: 2 (lower is better) Translates to: VSYKGCVHISSIPNQLRAWPHLC*HPQEIR Trigger: ACGGATCTCCTGAGGATGGCAGCATAGATGAGGCCA...AGCTCTTAGCTGGTTAGGTATGGATGAAATGTGAACACAGCCTTTGTAGCTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR CAA 90 bp | GCCCTGAGACAGACTTTACAGAAAACAAATAACATCACAAGTCTCTaGGACCTCAGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ALRQTLQKTNNITSL*DLRPADIERQGKVE Trigger: TTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR CAA 90 bp | CTCCTCTTCAGAAGGGCAATACACAGGCAGAAATTCAATTTCCACTaGGTTTTGAAACTGGCACAGAGTGAGCCACAGGATTTTCAACGC | + |
|
Preference number: 2 (lower is better) Translates to: LLFRRAIHRQKFNFH*VLKLAQSEPQDFQR Trigger: GCGTTGAAAATCCTGTGGCTCACTCTGTGCCAGTTTCAAAACCAAGTGGAAATTGAATTTCTGCCTGTGTATTGCCCTTCTGAAGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTCCATTCTAGTCCGCTTTCTTACAAGAATTCTTTCTCCCAAAGTCTGAGTATTGGGAGTTGGTGCTaGGGGTGTCTGTGCACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: IFHSSPLSYKNSFSQSLSIGSWC*GCLCTA Trigger: AGCTGTGCACAGACACCCCCAGCACCAACTCCCAAT...ACTCAGACTTTGGGAGAAAGAATTCTTGTAAGAAAGCGGACTAGAATGGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR GCA 90 bp | AACAAGATTCCAAAGCTTAGGAAACAAACTAAACCTACAGTCACTGTGCTTTACAACGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NKIPKLRKQTKPTVTVLYNAPGP*HVHVMV Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGTT...GTAAAGCACAGTGACTGTAGGTTTAGTTTGTTTCCTAAGCTTTGGAATCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTTTCAAAGTACTTAAGTGAGGTTTATAAAAGAGTCACGACCTCCTGCACCATTTCCACTTGGTTTTaGAACTGGCACAGAGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: MFSKYLSEVYKRVTTSCTISTWF*NWHRVS Trigger: GCTCACTCTGTGCCAGTTTCAAAACCAAGTGGAAAT...GGTGCAGGAGGTCGTGACTCTTTTATAAACCTCACTTAAGTACTTTGAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGATTCCAAAGCTTAGGAAACAAACTAAACCTACAGTCACTGTGCTTTACGGAAAAATCATTATCTaGGGCCACTTTCCATTCGAC | + |
|
Preference number: 2 (lower is better) Translates to: NKIPKLRKQTKPTVTVLYGKIII*GHFPFD Trigger: GTCGAATGGAAAGTGGCCTCAGATAATGATTTTTCC...GTAAAGCACAGTGACTGTAGGTTTAGTTTGTTTCCTAAGCTTTGGAATCTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR GCA 72 bp | ACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTaGCCCACAGGGAGGCCCCGAGCAGCCGCCCGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: TAIPVPTQPVES*PTGRPRAAARP Trigger: CGGGCGGGCGGCTGCTCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR CCA 72 bp | GTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTaGAGTCCTGCCCCACAGGGAGGCCCCGAGCAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: VSTQPYLCPLSL*SPAPQGGPEQP Trigger: CGGCTGCTCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR GCA 72 bp | GGCGCCCGCAGACAGGGCGGGCACTGCCCCTTCCCCTaGCCGGTATGTACATTCACAGTTCTGATGCGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: GARRQGGHCPFP*PVCTFTVLMRG Trigger: TCCGCGCATCAGAACTGTGAATGTACATACCGGGCAGGGGAAGGGGCAGTGCCCGCCCTGTCTGCGGGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR CCA 72 bp | CCCCGAGCAGCCGCCCGCCCGCCTGCCTGCCTGCAATaGGCAGATGGGACACACATACAGCTTCCCTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PRAAARPPACLQ*ADGTHIQLPCK Trigger: TTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGGCGGCTGCTCGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGAGCAGGCAAGCGAAGTaGTCCTTCTGCCAGAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SHTCAHSACGVLPHREAPSRQAK*SFCQSQ Trigger: CTGGCTCTGGCAGAAGGACAACTTCGCTTGCCTGCT...CGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR TCA 72 bp | CACACAATCAGGCTCCAGGCCACTGGAGGCAGGTGGTaGTGCGGGAGGGGCCTCATCCCTCCGGAATCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HTIRLQATGGRW*CGRGLIPPESS Trigger: GGAAGATTCCGGAGGGATGAGGCCCCTCCCGCATCACCACCTGCCTCCAGTGGCCTGGAGCCTGATTGTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCAACATCACAAGTCTCTaGGACCTCAGGCCTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QPYLCPLSLWSPAPQGGPNITSL*DLRPAD Trigger: GTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTT...GGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCAGAAGCCATTGGGAGTaGGTGCTGGGGGTGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TQPYLCPLSLWSPAPQGGRSHWE*VLGVSV Trigger: CACAGACACCCCCAGCACCAACTCCCAATGGCTTCT...GCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CCA 72 bp | CGCTTGATCTCCTCCACTGTCTTCCTTCGCGAGTCCTaGTCAGAGCGGGACACGAACACTGGCCTGATGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RLISSTVFLRES*SERDTNTGLMY Trigger: ATACATCAGGCCAGTGTTCGTGTCCCGCTCTGACCAGGACTCGCGAAGGAAGACAGTGGAGGAGATCAAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGGCTCCAGGCCACTGGAGAACATCACAAGTCTCTaGGACCTCAGGCCTGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: ETGKGRRRNTQSGSRPLENITSL*DLRPAD Trigger: GTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTT...CTCCAGTGGCCTGGAGCCTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR TCA 72 bp | ACTTTACGTCGTGTCATGTTTATTCCACTGAAAACCTaGAGCCCGCACCCCAAAGGCGCCCGCAGACAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLRRVMFIPLKT*SPHPKGARRQG Trigger: GCCCTGTCTGCGGGCGCCTTTGGGGTGCGGGCTTCAGGTTTTCAGTGGAATAAACATGACACGACGTAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR GCA 72 bp | GGGTATGTGCAGCGCACGCACAGAGGTCCTGCATTGTaGACACCGCACAAACAAAGAGGGGAAAGACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GYVQRTHRGPAL*TPHKQRGERQT Trigger: TGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTGTGCGTGCGCTGCACATACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR GCA 72 bp | ATGCCAGCTGGATGGTGGCTAAGGTCTGGGATGGCCTaGACACCACAGACAAGGCGACCACATATTCACGAA | + |
|
Preference number: 3 (lower is better) Translates to: MPAGWWLRSGMA*TPQTRRPHIHE Trigger: TTCGTGAATATGTGGTCGCCTTGTCTGTGGTGTGCAGGCCATCCCAGACCTTAGCCACCATCCAGCTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CCA 72 bp | TACATCTTGAATGCCAGCTGGATGGTGGCTAAGGTCTaGGATGGCCTGCACACCACAGACAAGGCGACCACA | + |
|
Preference number: 3 (lower is better) Translates to: YILNASWMVAKV*DGLHTTDKATT Trigger: TGTGGTCGCCTTGTCTGTGGTGTGCAGGCCATCCCAGACCTTAGCCACCATCCAGCTGGCATTCAAGATGTA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR TCA 72 bp | ATCTCCCTGCCCATCCCGCGGCAGTGTGGCGCTGTGTaGCTGAGGTTGACAAGTTTTGTTTATGTGACCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ISLPIPRQCGAV*LRLTSFVYVTS Trigger: AGAGGTCACATAAACAAAACTTGTCAACCTCAGTCACACAGCGCCACACTGCCGCGGGATGGGCAGGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR TCA 72 bp | GCGAGTCCTGGTCAGAGCGGGACACGAACACTGGCCTaGTGTATCTTATCAGAGTTCCCCAGATTGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: ASPGQSGTRTLA*CILSEFPRLGC Trigger: ACATCCCAATCTGGGGAACTCTGATAAGATACATCAGGCCAGTGTTCGTGTCCCGCTCTGACCAGGACTCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR GCA 72 bp | GCAGAAGCCATTGGGAGTTGGTGCTGGGGGTGTCTGTaGACAGCTGTCGAAATGTGTCTGATCAGGGTACAA | + |
|
Preference number: 3 (lower is better) Translates to: AEAIGSWCWGCL*TAVEMCLIRVQ Trigger: TTGTACCCTGATCAGACACATTTCGACAGCTGTGCACAGACACCCCCAGCACCAACTCCCAATGGCTTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CCA 72 bp | TACGCTCAGATGGTGGCTGCTTTCCCTAAGTCACCATaGCAACCAGTGCAAAGAGAGGGTGATGGGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: YAQMVAAFPKSP*QPVQREGDGLW Trigger: CCAAAGCCCATCACCCTCTCTTTGCACTGGTTGCCATGGTGACTTAGGGAAAGCAGCCACCATCTGAGCGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCTGTGCACAGCTGTCGAAATGTGTCTGATCAGGGTACAAGTAGTCCTCTGCAACGCTCCAGGTCCTaGCCACGTCCATGTGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: VSVHSCRNVSDQGTSSPLQRSRS*PRPCDG Trigger: ACCATCACATGGACGTGGCAAGGACCTGGAGCGTTG...CAGAGGACTACTTGTACCCTGATCAGACACATTTCGACAGCTGTGCACAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR TCA 72 bp | AATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCTaGTCTCATGAAGGGCCAAGCACAGCAAACTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: NAEGDSLDPVPS*SHEGPSTANSV Trigger: CACAGAGTTTGCTGTGCTTGGCCCTTCATGAGATCAGGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR CCA 72 bp | TCCCAGGTCTGCTCAGGATTCCTTCAACATGACCAGTaGCCATTCCTCAGGAATCCATCACTTGCAGATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SQVCSGFLQHDQ*PFLRNPSLADG Trigger: GCCATCTGCAAGTGATGGATTCCTGAGGAATGGCCACTGGTCATGTTGAAGGAATCCTGAGCAGACCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAAAGGTGATTCTTCCCTTGTCCTCTTGGTCAATAGCCTGGAACAAGTCGGACTGTGCCCGTCGCTaGATCTCCTCCACTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSKVILPLSSWSIAWNKSDCARR*ISSTVF Trigger: GAAGACAGTGGAGGAGATCAAGCGACGGGCACAGTC...CGACTTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAGAATCACCTTTGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGAAGGTCAATCTCACCACCACCACTCTCGTCAAAAAGCGAGAACATGTCTTCATGACACGCCTCACATaGCTGGCATACAGGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TKVNLTTTTLVKKREHVFMTRLT*LAYRAG Trigger: TCCTGCCCTGTATGCCAGCAATGTGAGGCGTGTCAT...GAAGACATGTTCTCGCTTTTTGACGAGAGTGGTGGTGGTGAGATTGACCTTCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATACTGACACTCCCTCTGAGAAACTCAGAAAACAGCTTTCCTGCATTTACTGAGACACCCAGGGCCTaGGCCATGACACGCCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: HILTLPLRNSENSFPAFTETPRA*AMTRLT Trigger: TGTGAGGCGTGTCATGGCCAAGGCCCTGGGTGTCTC...AGTAAATGCAGGAAAGCTGTTTTCTGAGTTTCTCAGAGGGAGTGTCAGTATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCAACACCCAGTGCAGTCTaGAGGATGCAGGACAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SCIVHTAQTKRGKTDTNSTPSAV*RMQDRL Trigger: CAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGT...TGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR TCA 72 bp | AAGACAGACACAAACTCAAGACCAGCGTATTCTAGGTaGGCACACAGCCATACCTGTGCCCACTCAGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KTDTNSRPAYSR*AHSHTCAHSAC Trigger: ACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACGCTGGTCTTGAGTTTGTGTCTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR TCA 72 bp | CAGAAACACTTAGAATCCGATGATGCCCCCGTCACGTaGGCCAGAGACGGCAGAGGCACTAAATTAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: QKHLESDDAPVT*ARDGRGTKLGQ Trigger: TTGTCCTAATTTAGTGCCTCTGCCGTCTCTGGCTCACGTGACGGGGGCATCATCGGATTCTAAGTGTTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR TCA 72 bp | TCTCTGCCTTCATCACAATGGAGGACATGGTCATGGTaGCCGGGATGGCATCAAAGTAGGAGGAATGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLPSSQWRTWSW*PGWHQSRRNVE Trigger: CTCCACATTCCTCCTACTTTGATGCCATCCCGGTCACCATGACCATGTCCTCCATTGTGATGAAGGCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR TCA 72 bp | GGATTTTCAACGCTCCAGGTCCTTGCCACGTCCATGTaGTGGTGTCCAATTTGTTTGGGTAGCGTAGCACCA | + |
|
Preference number: 3 (lower is better) Translates to: GFSTLQVLATSM*WCPICLGSVAP Trigger: TGGTGCTACGCTACCCAAACAAATTGGACACCATCACATGGACGTGGCAAGGACCTGGAGCGTTGAAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR TCA 72 bp | CGGTCACTGTTAATTCTGATACACCCAGTGCAGTCTTaGGGATGCAGGACAGGTTGGCCTCATCTATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RSLLILIHPVQS*GCRTGWPHLCC Trigger: GCAGCATAGATGAGGCCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGTATCAGAATTAACAGTGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR GCA 72 bp | AGAGTGAGCCACAGGATTTTCAACGCTCCAGGTCCTTaGCACGTCCATGTGATGGTGTCCAATTTGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: RVSHRIFNAPGP*HVHVMVSNLFG Trigger: CCCAAACAAATTGGACACCATCACATGGACGTGGCAAGGACCTGGAGCGTTGAAAATCCTGTGGCTCACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR GCA 72 bp | GTCGAAATGTGTCTGATCAGGGTACAAGTAGTCCTCTaGGTAGTCGGGGTACATTTCCGCAAACCCGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VEMCLIRVQVVL*VVGVHFRKPAE Trigger: TTCTGCGGGTTTGCGGAAATGTACCCCGACTACGCAGAGGACTACTTGTACCCTGATCAGACACATTTCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATCCATACCTAACCAGCTAAGAGCTCAGAAATCCATCTCCCTGCCCATCCCGCCTGCATTTACTGGCTaGGTGGTCATTTCCTATAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSIPNQLRAQKSISLPIPPAFTG*VVISYS Trigger: GCTATAGGAAATGACCACCAAGCCAGTAAATGCAGG...CGGGATGGGCAGGGAGATGGATTTCTGAGCTCTTAGCTGGTTAGGTATGGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR TCA 72 bp | CTCGTCAAAAAGCGAGAACATGTCTTCCAGTGCATCTaGGACAGGAACTTCCAAGTAGGCCGCAAACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LVKKREHVFQCI*DRNFQVGRKLW Trigger: CCAGAGTTTGCGGCCTACTTGGAAGTTCCTGTCTCAGATGCACTGGAAGACATGTTCTCGCTTTTTGACGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAATCTCACCACCACCACTCTCGTCAAAAAGCGAGAACATGTCTTCCAGTGCAATGAACGCACCAGGTTaGAAGGTAATGAGGCAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: SISPPPLSSKSENMSSSAMNAPG*KVMRQV Trigger: GACCTGCCTCATTACCTTCAAACCTGGTGCGTTCAT...TGCACTGGAAGACATGTTCTCGCTTTTTGACGAGAGTGGTGGTGGTGAGATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTATAAAAGAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATCAATGCAGAAGCCATaGGGAGTTGGTGCTGGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VYKRVTTSCTDTETLRIRSMQKP*GVGAGG Trigger: ACCCCCAGCACCAACTCCCAATGGCTTCTGCATTGA...TCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTCTTTTATAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR GCA 72 bp | AAAAATCATTATCTGAGGCCACTTTCCATTCGACTGTaGCCGTCGCTTGATCTCCTCCACTGTCTTCCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: KNHYLRPLSIRL*PSLDLLHCLPS Trigger: CGAAGGAAGACAGTGGAGGAGATCAAGCGACGGGCACAGTCGAATGGAAAGTGGCCTCAGATAATGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CCA 72 bp | TGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTaGGCCCTGAGACAGACTTTACAGAAAACAAATAAC | + |
|
Preference number: 3 (lower is better) Translates to: WDTHTASLQMPS*ALRQTLQKTNN Trigger: GTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR-3UTR CAA 90 bp | CACATACTGACACTCCCTCTGAGAAACTCAGAAAACAGCTTTCCTGCATTTACTTCAGAGTTCCCCAGATaGGGATGTCTCTGCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HILTLPLRNSENSFPAFTSEFPR*GCLCSL Trigger: CAGAGAGCAGAGACATCCCAATCTGGGGAACTCTGA...AGTAAATGCAGGAAAGCTGTTTTCTGAGTTTCTCAGAGGGAGTGTCAGTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| 3UTR TCA 72 bp | AAGAATTCTTTCTCCCAAAGTCTGAGTTCTCAGGGCTaGAGTCAATGCAGAAGCCATTGGGAGTTGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KNSFSQSLSSQG*SQCRSHWELVL Trigger: CAGCACCAACTCCCAATGGCTTCTGCATTGACTTCAGCCCTGAGAACTCAGACTTTGGGAGAAAGAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CCA 72 bp | AAGGTGATTCTTCCCTTGTCCTCTTGGTCAATAGCCTaGAACAAGTCGGTCACTGTTAATTCTGATACACCC | + |
|
Preference number: 3 (lower is better) Translates to: KVILPLSSWSIA*NKSVTVNSDTP Trigger: GGGTGTATCAGAATTAACAGTGACCGACTTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAGAATCACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CCA 72 bp | ACTGAGGTTGACAAGTTTTGTTTATGTGACCTCTCTTaGGGAAAGCACATACTGACACTCCCTCTGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TEVDKFCLCDLS*GKHILTLPLRN Trigger: GTTTCTCAGAGGGAGTGTCAGTATGTGCTTTCCCCAAGAGAGGTCACATAAACAAAACTTGTCAACCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR CCA 72 bp | CAGAAGTCATCAAAGGTGATTCTTCCCTTGTCCTCTTaGTCAATAGCCTGGAACAAGTCGGTCACTGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: QKSSKVILPLSS*SIAWNKSVTVN Trigger: ATTAACAGTGACCGACTTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAGAATCACCTTTGATGACTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| 3UTR CCA 72 bp | GAAACTCAGAAAACAGCTTTCCTGCATTTACTGGCTTaGTGGTCATTTCCTATAGCAATGCCCCAAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ETQKTAFLHLLA*WSFPIAMPQMR Trigger: TCTCATTTGGGGCATTGCTATAGGAAATGACCACCAAGCCAGTAAATGCAGGAAAGCTGTTTTCTGAGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| 3UTR TCA 72 bp | CAATACACAGGCAGAAATTCAATTTCCACTTGGTTTTaGAACTGGCACAGAGTGAGCCACAGGATTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QYTGRNSISTWF*NWHRVSHRIFN Trigger: GTTGAAAATCCTGTGGCTCACTCTGTGCCAGTTTCAAAACCAAGTGGAAATTGAATTTCTGCCTGTGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGAGCAGCCCAGGGAAGCCAGGAGTaGAAAGGGCCAGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVPTQPVESCPTGRPRAAQGSQE*KGPGQQ Trigger: CTGCTGGCCTGGCCCTTTGCACTCCTGGCTTCCCTG...GGCTGCTCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCGAGCAGCCGCACAGCGTCAACGTCATaGAAGCCACCTGGGCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAHSACGVLPHREAPSSRTASTS*KPPGPS Trigger: AGAAGGCCCAGGTGGCTTTCATGACGTTGACGCTGT...GCGGCTGCTCGGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR TCA 90 bp | GCCCGCCCGCCTGCCTGCCTGCAATGGGCAGATGGGACACACATACAGCTTCCCCCAGGGCCTTGGCCATaGCACGCCTCACATTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ARPPACLQWADGTHIQLPPGPWP*HASHCW Trigger: CCAGCAATGTGAGGCGTGTCATGGCCAAGGCCCTGG...GGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | ACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCAGAGCTGGGCCTTCTaGAGGGCGCTCAGTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQPYLCPLSLWSPAPQGGQSWAF*RALSRS Trigger: GCTGCGACTGAGCGCCCTGCAGAAGGCCCAGCTCTG...GCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147566.8 |
||
| CDS-3UTR TCA 90 bp | AAAGGCGCCCGCAGACAGGGCGGGCACTGCCCCTTCCCCTGCCCGGTATGTACACACCCAGTGCAGTCTTaGGGATGCAGGACAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KGARRQGGHCPFPCPVCTHPVQS*GCRTGW Trigger: CCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTG...TGTACATACCGGGCAGGGGAAGGGGCAGTGCCCGCCCTGTCTGCGGGCGCCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CCA 90 bp | CAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCATGCCAGCTGGATGGTaGCTAAGGTCTGGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPYLCPLSLWSPAPQGGPMPAGW*LRSGMA Trigger: GGCCATCCCAGACCTTAGCCACCATCCAGCTGGCAT...GGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCCTGGCCACCTGGGCCTTCTaGAGGGCGCTCAGTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MGRWDTHTASLQMPSWALATWAF*RALSRS Trigger: GCTGCGACTGAGCGCCCTGCAGAAGGCCCAGGTGGC...CAGGGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CCA 90 bp | ACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCATGCCAGCTGGATGGTaGCTAAGGTCTGGGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TAIPVPTQPVESCPTGRPMPAGW*LRSGMA Trigger: GGCCATCCCAGACCTTAGCCACCATCCAGCTGGCAT...GGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | ACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCACCCAGTGCAGTCTTaGGGATGCAGGACAGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQPYLCPLSLWSPAPQGGHPVQS*GCRTGW Trigger: CCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTG...GCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | CAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCCTGAGACACGACCCTGGGCCTTCTaGAGGGCGCTCAGTCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QMGHTYSFPANAQLGPETRPWAF*RALSRS Trigger: GCTGCGACTGAGCGCCCTGCAGAAGGCCCAGGGTCG...TGTCTCAGGGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCGTAGGCCGCAAACTCTaGAAGGCGGATTTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAIPVPTQPVESCPTGRPVGRKL*KADFLS Trigger: GGAGAGAAAATCCGCCTTCCAGAGTTTGCGGCCTAC...GGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCGCCCGCAGACAGGGCGGGCACTGCCCCTTCCCCTGCCCGGTATGTACAGTCTTCCAGTGCATCTaGGACAGGAACTTCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGARRQGGHCPFPCPVCTVFQCI*DRNFQV Trigger: TACTTGGAAGTTCCTGTCTCAGATGCACTGGAAGAC...TGTACATACCGGGCAGGGGAAGGGGCAGTGCCCGCCCTGTCTGCGGGCGCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR GCA 90 bp | GAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATGATGCCCCCCTCAGTCGCAGCTCGTaGACGAAGGGGTTCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPPAPTQKHLESDDAPLSRSS*TKGFRP Trigger: GGGGCGGAACCCCTTCGTGCACGAGCTGCGACTGAG...GGGGGCATCATCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTGGTGCTGGGGGTGTCTGTGCACAGCTGTCGAAATGTGTCTGATCAGGGTCTCAGTCGCAGCTCGTaGACGAAGGGGTTCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ELVLGVSVHSCRNVSDQGLSRSS*TKGFRP Trigger: GGGGCGGAACCCCTTCGTGCACGAGCTGCGACTGAG...ACCCTGATCAGACACATTTCGACAGCTGTGCACAGACACCCCCAGCACCAACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGCGTATTCTAGGTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTGGGCCAGGGGCTGCTCTaGCTCCTTATCAGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DQRILGEHTAIPVPTQPVGQGLL*LLIRRS Trigger: GGACCTCCTGATAAGGAGCCAGAGCAGCCCCTGGCC...CACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACGCTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | GCCCGCCCGCCTGCCTGCCTGCAATGGGCAGATGGGACACACATACAGCTTCCCCTTGCCACGTCCATGTaGTGGTGTCCAATTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARPPACLQWADGTHIQLPLATSM*WCPICL Trigger: CAAACAAATTGGACACCATCACATGGACGTGGCAAG...GGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | ATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGGCTCCAGGCCACCTCAGTCGCAGCTCGTaGACGAAGGGGTTCCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IERQGKVEGATHNQAPGHLSRSS*TKGFRP Trigger: GGGGCGGAACCCCTTCGTGCACGAGCTGCGACTGAG...GTGGCCTGGAGCCTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR GCA 90 bp | GCAATGGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCAGGTCTGGGATGGCCTaGACACCACAGACAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AMGRWDTHTASLQMPSWARSGMA*TPQTRR Trigger: TCGCCTTGTCTGTGGTGTGCAGGCCATCCCAGACCT...GGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCCTGCGAACAGGAGCCGGATaGGGAACAGCGTCAACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGRWDTHTASLQMPSWALRTGAG*GTASTS Trigger: TGACGTTGACGCTGTTCCCCATCCGGCTCCTGTTCG...CAGGGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCGCCCGCAGACAGGGCGGGCACTGCCCCTTCCCCTGCCCGGTATGTACATCTTGGTCAATAGCCTaGAACAAGTCGGTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGARRQGGHCPFPCPVCTSWSIA*NKSVTV Trigger: AACAGTGACCGACTTGTTCCAGGCTATTGACCAAGA...TGTACATACCGGGCAGGGGAAGGGGCAGTGCCCGCCCTGTCTGCGGGCGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
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| CDS-3UTR GCA 90 bp | CGTATTCTAGGTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCGCGAAGTTGTCCTTCTaGCAGAGCCAGCTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RILGEHTAIPVPTQPVESAKLSF*QSQLAV Trigger: GACTGCCAGCTGGCTCTGGCAGAAGGACAACTTCGC...GGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | AGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCCTGAGACAGAGGTCTGGGATGGCCTaGACACCACAGACAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RWDTHTASLQMPSWALRQRSGMA*TPQTRR Trigger: TCGCCTTGTCTGTGGTGTGCAGGCCATCCCAGACCT...CTGTCTCAGGGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAAGAGCTCAGAAATCCATCTCCCTGCCCATCCCGCGGCAGTGTGGCGCGCGGGACACGAACACTaGCCTGATGTATCTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAKSSEIHLPAHPAAVWRAGHEH*PDVSYQ Trigger: CTGATAAGATACATCAGGCCAGTGTTCGTGTCCCGC...GCGCCACACTGCCGCGGGATGGGCAGGGAGATGGATTTCTGAGCTCTTAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CCA 90 bp | AGTCACCATGGCAACCAGTGCAAAGAGAGGGTGATGGGCTTTGGGCAGGACCTCTTCCTTCGCGAGTCCTaGTCAGAGCGGGACACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHHGNQCKERVMGFGQDLFLRES*SERDTN Trigger: GTTCGTGTCCCGCTCTGACCAGGACTCGCGAAGGAA...GAGGTCCTGCCCAAAGCCCATCACCCTCTCTTTGCACTGGTTGCCATGGTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CCA 90 bp | CCAGCTAAGAGCTCAGAAATCCATCTCCCTGCCCATCCCGCGGCAGTGTGGCGCATCTTGAATGCCAGCTaGATGGTGGCTAAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAKSSEIHLPAHPAAVWRILNAS*MVAKVW Trigger: CCAGACCTTAGCCACCATCCAGCTGGCATTCAAGAT...GCGCCACACTGCCGCGGGATGGGCAGGGAGATGGATTTCTGAGCTCTTAGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR TCA 90 bp | CCGCCCGCCTGCCTGCCTGCAATGGGCAGATGGGACACACATACAGCTTCCCTGATTTCCACTTGGTTTTaGAACTGGCACAGAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPACLPAMGRWDTHTASLISTWF*NWHRVS Trigger: GCTCACTCTGTGCCAGTTTCAAAACCAAGTGGAAAT...CAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTTGGACCTCAGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCCAGGGCCTTGGCCATaGCACGCCTCACATTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSLGPQACRHRETGKGRRPGPWP*HASHCW Trigger: CCAGCAATGTGAGGCGTGTCATGGCCAAGGCCCTGG...CCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCTGAGGTCCAAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CCA 90 bp | GCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGGCTCCAGGCCAGGGGCTGCTCTaGCTCCTTATCAGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADIERQGKVEGATHNQAPGQGLL*LLIRRS Trigger: GGACCTCCTGATAAGGAGCCAGAGCAGCCCCTGGCC...TGGAGCCTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| 3UTR CAA 72 bp | GGAGGGTATGTGCAGCGCACGCACAGAGGTCCTGCATaGTGCACACCGCACAAACAAAGAGGGGAAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GGYVQRTHRGPA*CTPHKQRGERQ Trigger: CTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTGTGCGTGCGCTGCACATACCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
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| 3UTR CAA 72 bp | AACATGACCAGTGGCCATTCCTCAGGAATCCATCACTaGCAGATGGCAGGGCAGAGCCCAAGCCTCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NMTSGHSSGIHH*QMAGQSPSLGT Trigger: TGTCCCGAGGCTTGGGCTCTGCCCTGCCATCTGCAAGTGATGGATTCCTGAGGAATGGCCACTGGTCATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGGAGGGTATGTGCAGCGCACGCACAGAGGTCCTGCATTGTGCACACCGGATGTCTCTGCTCTCTaGCTTCATCACAATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQGGYVQRTHRGPALCTPDVSAL*LHHNGG Trigger: TCCTCCATTGTGATGAAGGCAGAGAGCAGAGACATC...CGGTGTGCACAATGCAGGACCTCTGTGCGTGCGCTGCACATACCCTCCCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | TCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATGATGCCCCCGTCAACGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRPPAPTQKHLESDDAPVNAPGP*HVHVMV Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGTT...GACGGGGGCATCATCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CCA 90 bp | GAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATGATGCCCCCATTGGGAGTTGGTGCTaGGGGTGTCTGTGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESRPPAPTQKHLESDDAPIGSWC*GCLCTA Trigger: AGCTGTGCACAGACACCCCCAGCACCAACTCCCAAT...GGGGGCATCATCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| 3UTR CAA 72 bp | GATACACCCAGTGCAGTCTTGAGGATGCAGGACAGGTaGGCCTCATCTATGCTGCCATCCTCAGGAGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: DTPSAVLRMQDR*ASSMLPSSGDP Trigger: CGGATCTCCTGAGGATGGCAGCATAGATGAGGCCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR CCA 90 bp | TCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATGATGCCCCCGTCCAGAGTTCCCCAGATTaGGATGTCTCTGCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRPPAPTQKHLESDDAPVQSSPD*DVSALC Trigger: GCAGAGAGCAGAGACATCCCAATCTGGGGAACTCTG...GACGGGGGCATCATCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | GAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGGCTCCAGGCCACTGGAGATCTTGAATGCCAGCTaGATGGTGGCTAAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETGKGRRRNTQSGSRPLEILNAS*MVAKVW Trigger: CCAGACCTTAGCCACCATCCAGCTGGCATTCAAGAT...CTCCAGTGGCCTGGAGCCTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | GCAATGGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCACACGAACACTGGCCTaGTGTATCTTATCAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AMGRWDTHTASLQMPSWATRTLA*CILSEF Trigger: GAACTCTGATAAGATACATCAGGCCAGTGTTCGTGT...GGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAGCTGTCACCCCCACAGAGTAAAGCCACCTACGCTCAGATGGTGGCTGCTGATGTCTCTGCTCTCTaGCTTCATCACAATGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLSPPQSKATYAQMVAADVSAL*LHHNGG Trigger: TCCTCCATTGTGATGAAGGCAGAGAGCAGAGACATC...AGCAGCCACCATCTGAGCGTAGGTGGCTTTACTCTGTGGGGGTGACAGCTGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR GCA 90 bp | AGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGAACGCTCCAGGTCCTTaGCACGTCCATGTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPADIERQGKVEGATHNQNAPGP*HVHVMV Trigger: CACCATCACATGGACGTGGCAAGGACCTGGAGCGTT...CTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCAAGTCATGAAAGCCACCTaGGCCTTCTGCAGGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PALCTPHKQRGERQTQTQVMKAT*AFCRAL Trigger: GAGCGCCCTGCAGAAGGCCCAGGTGGCTTTCATGAC...TTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CCA 90 bp | CGTATTCTAGGTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCCTTCCCTTGTCCTCTTaGTCAATAGCCTGGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: RILGEHTAIPVPTQPVESLPLSS*SIAWNK Trigger: CTTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAG...GGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGTCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACACAATGCAGAAGCCATTaGGAGTTGGTGCTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRSCIVHTAQTKRGKTDTQCRSH*ELVLGV Trigger: CACCCCCAGCACCAACTCCCAATGGCTTCTGCATTG...TGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | CGTATTCTAGGTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCACACGAACACTGGCCTaGTGTATCTTATCAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RILGEHTAIPVPTQPVESTRTLA*CILSEF Trigger: GAACTCTGATAAGATACATCAGGCCAGTGTTCGTGT...GGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | GGACCTCAGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACTTGCCACGTCCATGTaGTGGTGTCCAATTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GPQACRHRETGKGRRRNTLATSM*WCPICL Trigger: CAAACAAATTGGACACCATCACATGGACGTGGCAAG...TGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCTGAGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCACGAACAGGAGCCGGATaGGGAACAGCGTCAACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SCIVHTAQTKRGKTDTNSRTGAG*GTASTS Trigger: TGACGTTGACGCTGTTCCCCATCCGGCTCCTGTTCG...TGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAGGTCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACAGTAGGCCGCAAACTCTaGAAGGCGGATTTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRGPALCTPHKQRGERQTVGRKL*KADFLS Trigger: GGAGAGAAAATCCGCCTTCCAGAGTTTGCGGCCTAC...TGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | GTTAGCTACAAAGGCTGTGTTCACATTTCATCCATACCTAACCAGCTAAGAGCTGGAAGTCCACGACCCTaGGCCTTCTGCAGGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSYKGCVHISSIPNQLRAGSPRP*AFCRAL Trigger: GAGCGCCCTGCAGAAGGCCCAGGGTCGTGGACTTCC...AGCTCTTAGCTGGTTAGGTATGGATGAAATGTGAACACAGCCTTTGTAGCTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123766.8 |
||
| CDS-3UTR GCA 90 bp | GGACCTCAGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACAAGATTGGGATGTCTCTaGTCTCTGCCTTCATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GPQACRHRETGKGRRRNTRLGCL*SLPSSQ Trigger: TTGTGATGAAGGCAGAGAGCAGAGACATCCCAATCT...TGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCTGAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAGGAAACCAGGTAATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCTGGCCTCATCTATGCTaGCATCCTCAGGAGATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KKRKPGNAEGDSLDPVPSWPHLC*HPQEIR Trigger: ACGGATCTCCTGAGGATGGCAGCATAGATGAGGCCA...GGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATTACCTGGTTTCCTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| 3UTR CAA 72 bp | TCATCTATGCTGCCATCCTCAGGAGATCCGTACATCTaGAATGCCAGCTGGATGGTGGCTAAGGTCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSMLPSSGDPYI*NASWMVAKVWD Trigger: ATCCCAGACCTTAGCCACCATCCAGCTGGCATTCAAGATGTACGGATCTCCTGAGGATGGCAGCATAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR TCA 90 bp | GGACCTCAGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACAGGAAAAATCATTATCTaGGGCCACTTTCCATTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GPQACRHRETGKGRRRNTGKIII*GHFPFD Trigger: GTCGAATGGAAAGTGGCCTCAGATAATGATTTTTCC...TGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCTGAGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAGGAAACCAGGTAATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCCTGAGTTCTCAGGGCTaGAGTCAATGCAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKRKPGNAEGDSLDPVPSLSSQG*SQCRSH Trigger: ATGGCTTCTGCATTGACTTCAGCCCTGAGAACTCAG...GGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATTACCTGGTTTCCTCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CCA 90 bp | TCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCACAGAGTTCCCCAGATTaGGATGTCTCTGCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCIVHTAQTKRGKTDTNSQSSPD*DVSALC Trigger: GCAGAGAGCAGAGACATCCCAATCTGGGGAACTCTG...TGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAGGTCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACTTCCCTTGTCCTCTTaGTCAATAGCCTGGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRGPALCTPHKQRGERQTLPLSS*SIAWNK Trigger: CTTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAG...TGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | CCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCAAGACCAGCGTATTCTAATTGGGAGTTGGTGCTaGGGGTGTCTGTGCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHKQRGERQTQTQDQRILIGSWC*GCLCTA Trigger: AGCTGTGCACAGACACCCCCAGCACCAACTCCCAAT...TAGAATACGCTGGTCTTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | GCACAAACAAAGAGGGGAAAGACAGACACAAACTCAAGACCAGCGTATTCTAGGCAATGCAGAAGCCATTaGGAGTTGGTGCTGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQTKRGKTDTNSRPAYSRQCRSH*ELVLGV Trigger: CACCCCCAGCACCAACTCCCAATGGCTTCTGCATTG...CCTAGAATACGCTGGTCTTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| 3UTR CAA 72 bp | TCGGTCACTGTTAATTCTGATACACCCAGTGCAGTCTaGAGGATGCAGGACAGGTTGGCCTCATCTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVTVNSDTPSAV*RMQDRLASSML Trigger: CAGCATAGATGAGGCCAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGTATCAGAATTAACAGTGACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGGATGAACATCCGTCCCAGGTCTGCTCAGGATTCCTTCAACATGACCAGTATTTCCACTTGGTTTTaGAACTGGCACAGAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRMNIRPRSAQDSFNMTSISTWF*NWHRVS Trigger: GCTCACTCTGTGCCAGTTTCAAAACCAAGTGGAAAT...ACTGGTCATGTTGAAGGAATCCTGAGCAGACCTGGGACGGATGTTCATCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR TCA 90 bp | CCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCAACTGAGTTCTCAGGGCTaGAGTCAATGCAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PALCTPHKQRGERQTQTQLSSQG*SQCRSH Trigger: ATGGCTTCTGCATTGACTTCAGCCCTGAGAACTCAG...TTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGAAAACAAATAACATCACAAGTCTCTTGGACCTCAGGCCTGCAGACGCGAAGTTGTCCTTCTaGCAGAGCCAGCTGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLQKTNNITSLLDLRPADAKLSF*QSQLAV Trigger: GACTGCCAGCTGGCTCTGGCAGAAGGACAACTTCGC...GTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | CTTTACAGAAAACAAATAACATCACAAGTCTCTTGGACCTCAGGCCTGCAGACATTCCTTCGCGAGTCCTaGTCAGAGCGGGACACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYRKQITSQVSWTSGLQTFLRES*SERDTN Trigger: GTTCGTGTCCCGCTCTGACCAGGACTCGCGAAGGAA...TGTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| 3UTR CAA 72 bp | GGCTGGACAGGAACTCCAGGAATGAACGCACCAGGTTaGAAGGTAATGAGGCAGGTCCTATTTGTACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GWTGTPGMNAPG*KVMRQVLFVQV Trigger: AACTTGTACAAATAGGACCTGCCTCATTACCTTCAAACCTGGTGCGTTCATTCCTGGAGTTCCTGTCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCAAGTCTTCCAGTGCATCTaGGACAGGAACTTCCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PALCTPHKQRGERQTQTQVFQCI*DRNFQV Trigger: TACTTGGAAGTTCCTGTCTCAGATGCACTGGAAGAC...TTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGAAAACAAATAACATCACAAGTCTCTTGGACCTCAGGCCTGCAGACTGGCCTCATCTATGCTaGCATCCTCAGGAGATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLQKTNNITSLLDLRPADWPHLC*HPQEIR Trigger: ACGGATCTCCTGAGGATGGCAGCATAGATGAGGCCA...GTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CCA 90 bp | ATGCCCAGCTGGGCCCTGAGACAGACTTTACAGAAAACAAATAACATCACAAGTGCGGGACACGAACACTaGCCTGATGTATCTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: MPSWALRQTLQKTNNITSAGHEH*PDVSYQ Trigger: CTGATAAGATACATCAGGCCAGTGTTCGTGTCCCGC...ACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| 3UTR CAA 72 bp | CAGACTTTACAGAAAACAAATAACATCACAAGTCTCTaGGACCTCAGGCCTGCAGACATAGAGAGACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTLQKTNNITSL*DLRPADIERQG Trigger: TCCCTGTCTCTCTATGTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000147566.8 ENSMUST00000223060.2 |
||
| 3UTR CAA 72 bp | AGAAGGGCAATACACAGGCAGAAATTCAATTTCCACTaGGTTTTGAAACTGGCACAGAGTGAGCCACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRAIHRQKFNFH*VLKLAQSEPQD Trigger: ATCCTGTGGCTCACTCTGTGCCAGTTTCAAAACCAAGTGGAAATTGAATTTCTGCCTGTGTATTGCCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123766.8 ENSMUST00000147566.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCCAGCTGGGCCCTGAGACAGACTTTACAGAAAACAAATAACATCACAAGTGGAAAAATCATTATCTaGGGCCACTTTCCATTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: MPSWALRQTLQKTNNITSGKIII*GHFPFD Trigger: GTCGAATGGAAAGTGGCCTCAGATAATGATTTTTCC...ACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR GCA 90 bp | ACTTTACAGAAAACAAATAACATCACAAGTCTCTTGGACCTCAGGCCTGCAGACAGATTGGGATGTCTCTaGTCTCTGCCTTCATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TLQKTNNITSLLDLRPADRLGCL*SLPSSQ Trigger: TTGTGATGAAGGCAGAGAGCAGAGACATCCCAATCT...GTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| 3UTR CAA 72 bp | AGAAACTCAGAAAACAGCTTTCCTGCATTTACTGGCTaGGTGGTCATTTCCTATAGCAATGCCCCAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RNSENSFPAFTG*VVISYSNAPNE Trigger: CTCATTTGGGGCATTGCTATAGGAAATGACCACCAAGCCAGTAAATGCAGGAAAGCTGTTTTCTGAGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTTTCAAAGTACTTAAGTGAGGTTTATAAAAGAGTCACGACCTCCTGCACCTCTTGGTCAATAGCCTaGAACAAGTCGGTCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MFSKYLSEVYKRVTTSCTSWSIA*NKSVTV Trigger: AACAGTGACCGACTTGTTCCAGGCTATTGACCAAGA...GGTGCAGGAGGTCGTGACTCTTTTATAAACCTCACTTAAGTACTTTGAAAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS GCA 90 bp | CGGATGGGGAACAGCGTCAACGTCATGAAAGCCACCTGGGCCTTCTaGAGGGCGCTCAGTCGCAGCTCGTGCACGAAGGGGTTCCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RMGNSVNVMKATWAF*RALSRSSCTKGFRP Trigger: GGGGCGGAACCCCTTCGTGCACGAGCTGCGACTGAGCGCCCTGCAGAAGGCCCAGGTGGCTTTCATGACGTTGACGCTGTTCCCCATCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS CCA 90 bp | GCAGCCTCAGTAGGCAGGGCCTGCCGCCCCTTCACAGCTACACGGTaGAAGCCGCCAGCAAACCACATGGTGCGCATGATGGCCTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AASVGRACRPFTATR*KPPANHMVRMMALS Trigger: GCTCAAGGCCATCATGCGCACCATGTGGTTTGCTGGCGGCTTCCACCGTGTAGCTGTGAAGGGGCGGCAGGCCCTGCCTACTGAGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCCCCACACCCAGTGCAGTCTaGAGGATGCAGGACAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QPYLCPLSLWSPAPQGGPTPSAV*RMQDRL Trigger: CAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGT...GGGGCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS GCA 90 bp | GAATGTGGAGCCAAGGTGAGGATAGCAGCCTCAGTAGGCAGGGCCTaGCGCCCCTTCACAGCTACACGGTGGAAGCCGCCAGCAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ECGAKVRIAASVGRA*RPFTATRWKPPANH Trigger: GTGGTTTGCTGGCGGCTTCCACCGTGTAGCTGTGAAGGGGCGGCAGGCCCTGCCTACTGAGGCTGCTATCCTCACCTTGGCTCCACATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS GCA 90 bp | GGGCTGCTCTGGCTCCTTATCAGGAGGTCCCAGGGAAGCCAGGAGTaGAAAGGGCCAGGCCAGCAGCATCATGAAAGCAGCGAACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLLWLLIRRSQGSQE*KGPGQQHHESSEQE Trigger: CTCCTGTTCGCTGCTTTCATGATGCTGCTGGCCTGGCCCTTTGCACTCCTGGCTTCCCTGGGACCTCCTGATAAGGAGCCAGAGCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGCTGTCACCCCCACAGAGTAAAGCCACCTACGCTCAGATGGTGGCTGCTGAGACACCCAGGGCCTaGGCCATGACACGCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LQLSPPQSKATYAQMVAAETPRA*AMTRLT Trigger: TGTGAGGCGTGTCATGGCCAAGGCCCTGGGTGTCTC...AGCAGCCACCATCTGAGCGTAGGTGGCTTTACTCTGTGGGGGTGACAGCTGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CAA 90 bp | CCTGTCCCCTTCAGCTGTCACCCCCACAGAGTAAAGCCACCTACGCTCAGATGGCAACGCTCCAGGTCCTaGCCACGTCCATGTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: PVPFSCHPHRVKPPTLRWQRSRS*PRPCDG Trigger: ACCATCACATGGACGTGGCAAGGACCTGGAGCGTTG...CCATCTGAGCGTAGGTGGCTTTACTCTGTGGGGGTGACAGCTGAAGGGGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
||
| CDS-3UTR CAA 90 bp | GTAGAAGGCGCAACACACAATCAGGCTCCAGGCCACTGGAGGCAGGTGGTGATGCAACGCTCCAGGTCCTaGCCACGTCCATGTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: VEGATHNQAPGHWRQVVMQRSRS*PRPCDG Trigger: ACCATCACATGGACGTGGCAAGGACCTGGAGCGTTG...CATCACCACCTGCCTCCAGTGGCCTGGAGCCTGATTGTGTGTTGCGCCTTCTAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATGATGCCCCCGAGACACCCAGGGCCTaGGCCATGACACGCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ESRPPAPTQKHLESDDAPETPRA*AMTRLT Trigger: TGTGAGGCGTGTCATGGCCAAGGCCCTGGGTGTCTC...GGGGGCATCATCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | GCAATGGGCAGATGGGACACACATACAGCTTCCCTGCAAATGCCCAGCTGGGCCAGCAGGCAAGCGAAGTaGTCCTTCTGCCAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AMGRWDTHTASLQMPSWASRQAK*SFCQSQ Trigger: CTGGCTCTGGCAGAAGGACAACTTCGCTTGCCTGCT...GGCCCAGCTGGGCATTTGCAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | GAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATGATGCCCCCGTGCGCATGATGGCCTaGAGCAGGAAGTCCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: ESRPPAPTQKHLESDDAPVRMMA*SRKSTT Trigger: GGTCGTGGACTTCCTGCTCAAGGCCATCATGCGCAC...GGGGGCATCATCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | GTAGAAGGCGCAACACACAATCAGGCTCCAGGCCACTGGAGGCAGGTGGTGATGAGGATGCAGGACAGGTaGGCCTCATCTATGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VEGATHNQAPGHWRQVVMRMQDR*ASSMLP Trigger: TGGCAGCATAGATGAGGCCAACCTGTCCTGCATCCT...CATCACCACCTGCCTCCAGTGGCCTGGAGCCTGATTGTGTGTTGCGCCTTCTAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | CCGCCCGCCTGCCTGCCTGCAATGGGCAGATGGGACACACATACAGCTTCCCTGTCTTCCCTTGTCCTCTaGGTCAATAGCCTGGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: PPACLPAMGRWDTHTASLSSLVL*VNSLEQ Trigger: TTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAGA...CAGGGAAGCTGTATGTGTGTCCCATCTGCCCATTGCAGGCAGGCAGGCGGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | GACCAGCGTATTCTAGGTGAGCACACAGCCATACCTGTGCCCACTCAGCCTGTGATGACACGCCTCACATaGCTGGCATACAGGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DQRILGEHTAIPVPTQPVMTRLT*LAYRAG Trigger: TCCTGCCCTGTATGCCAGCAATGTGAGGCGTGTCAT...CACAGGCTGAGTGGGCACAGGTATGGCTGTGTGCTCACCTAGAATACGCTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAGTGCGCATGATGGCCTaGAGCAGGAAGTCCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: QRSCIVHTAQTKRGKTDTVRMMA*SRKSTT Trigger: GGTCGTGGACTTCCTGCTCAAGGCCATCATGCGCAC...TGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGGTGCGCATGATGGCCTaGAGCAGGAAGTCCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: RPADIERQGKVEGATHNQVRMMA*SRKSTT Trigger: GGTCGTGGACTTCCTGCTCAAGGCCATCATGCGCAC...CTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | GCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGGCTCCAGACTGTGCCCGTCGCTaGATCTCCTCCACTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADIERQGKVEGATHNQAPDCARR*ISSTVF Trigger: GAAGACAGTGGAGGAGATCAAGCGACGGGCACAGTC...TGGAGCCTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGGTCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAGCAGGCAAGCGAAGTaGTCCTTCTGCCAGAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRSCIVHTAQTKRGKTDTSRQAK*SFCQSQ Trigger: CTGGCTCTGGCAGAAGGACAACTTCGCTTGCCTGCT...TGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGACCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | ACACAGCCATACCTGTGCCCACTCAGCCTGTGGAGTCCTGCCCCACAGGGAGGCAAATTCAATTTCCACTaGGTTTTGAAACTGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: TQPYLCPLSLWSPAPQGGKFNFH*VLKLAQ Trigger: CTGTGCCAGTTTCAAAACCAAGTGGAAATTGAATTT...GCCTCCCTGTGGGGCAGGACTCCACAGGCTGAGTGGGCACAGGTATGGCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | AAGTCTCTTGGACCTCAGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGATGACACGCCTCACATaGCTGGCATACAGGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: KSLGPQACRHRETGKGRRMTRLT*LAYRAG Trigger: TCCTGCCCTGTATGCCAGCAATGTGAGGCGTGTCAT...CCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCTGAGGTCCAAGAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGACACCCAGTGCAGTCTaGAGGATGCAGGACAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RPADIERQGKVEGATHNQTPSAV*RMQDRL Trigger: CAACCTGTCCTGCATCCTCAAGACTGCACTGGGTGT...CTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGAGGAAACCAGGTAATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCAGAAGCCATTGGGAGTaGGTGCTGGGGGTGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KKRKPGNAEGDSLDPVPSRSHWE*VLGVSV Trigger: CACAGACACCCCCAGCACCAACTCCCAATGGCTTCT...GGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATTACCTGGTTTCCTCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
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| CDS-3UTR CAA 90 bp | AGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGTCAATGCAGAAGCCATaGGGAGTTGGTGCTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: RPADIERQGKVEGATHNQSMQKP*GVGAGG Trigger: ACCCCCAGCACCAACTCCCAATGGCTTCTGCATTGA...CTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | TCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGATGATGCCCCCGTCTCTTCCCTTGTCCTCTaGGTCAATAGCCTGGAACAA | + |
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Preference number: 5 (lower is better) Translates to: SRPPAPTQKHLESDDAPVSSLVL*VNSLEQ Trigger: TTGTTCCAGGCTATTGACCAAGAGGACAAGGGAAGA...GACGGGGGCATCATCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGAGGAAACCAGGTAATGCTGAAGGTGACAGCCTGGACCCTGTTCCTTCCTCAGAGTTCCCCAGATaGGGATGTCTCTGCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: KKRKPGNAEGDSLDPVPSSEFPR*GCLCSL Trigger: CAGAGAGCAGAGACATCCCAATCTGGGGAACTCTGA...GGAAGGAACAGGGTCCAGGCTGTCACCTTCAGCATTACCTGGTTTCCTCTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
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| CDS-3UTR CAA 90 bp | GCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGGCAAGGTGATTCTTCCCTaGTCCTCTTGGTCAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: ACRHRETGKGRRRNTQSGKVILP*SSWSIA Trigger: GGCTATTGACCAAGAGGACAAGGGAAGAATCACCTT...GCCTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGCTGGGCCCTGAGACAGACTTTACAGAAAACAAATAACATCACAAGTGACTGTGCCCGTCGCTaGATCTCCTCCACTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: MPSWALRQTLQKTNNITSDCARR*ISSTVF Trigger: GAAGACAGTGGAGGAGATCAAGCGACGGGCACAGTC...ACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | GGAAAGGTAGAAGGCGCAACACACAATCAGGCTCCAGGCCACTGGAGGCAGGTGAAATTCAATTTCCACTaGGTTTTGAAACTGGCACAG | + |
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Preference number: 5 (lower is better) Translates to: GKVEGATHNQAPGHWRQVKFNFH*VLKLAQ Trigger: CTGTGCCAGTTTCAAAACCAAGTGGAAATTGAATTT...CACCTGCCTCCAGTGGCCTGGAGCCTGATTGTGTGTTGCGCCTTCTACCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTGCAGACATAGAGAGACAGGGAAAGGTAGAAGGCGCAACACACAATCAGAAGGTGATTCTTCCCTaGTCCTCTTGGTCAATAGCC | + |
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Preference number: 5 (lower is better) Translates to: RPADIERQGKVEGATHNQKVILP*SSWSIA Trigger: GGCTATTGACCAAGAGGACAAGGGAAGAATCACCTT...CTGATTGTGTGTTGCGCCTTCTACCTTTCCCTGTCTCTCTATGTCTGCAGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | GTTTATAAAAGAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAATCCGAAGAAGCCATTGGGAGTaGGTGCTGGGGGTGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: VYKRVTTSCTDTETLRIRRSHWE*VLGVSV Trigger: CACAGACACCCCCAGCACCAACTCCCAATGGCTTCT...TCGGATTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTCTTTTATAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | GCACAAACAAAGAGGGGAAAGACAGACACAAACTCAAGACCAGCGTATTCTAGGTCAATGCAGAAGCCATaGGGAGTTGGTGCTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: AQTKRGKTDTNSRPAYSRSMQKP*GVGAGG Trigger: ACCCCCAGCACCAACTCCCAATGGCTTCTGCATTGA...CCTAGAATACGCTGGTCTTGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCATTGTGCACACCGCACAAACAAAGAGGGGAAAGACAGACACAAACTCAATGAACGCACCAGGTTaGAAGGTAATGAGGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SCIVHTAQTKRGKTDTNSMNAPG*KVMRQV Trigger: GACCTGCCTCATTACCTTCAAACCTGGTGCGTTCAT...TGAGTTTGTGTCTGTCTTTCCCCTCTTTGTTTGTGCGGTGTGCACAATGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGCTGGGCCCTGAGACAGACTTTACAGAAAACAAATAACATCACAAGTAGGATGCAGGACAGGTaGGCCTCATCTATGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: MPSWALRQTLQKTNNITSRMQDR*ASSMLP Trigger: TGGCAGCATAGATGAGGCCAACCTGTCCTGCATCCT...ACTTGTGATGTTATTTGTTTTCTGTAAAGTCTGTCTCAGGGCCCAGCTGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | ACTTTACAGAAAACAAATAACATCACAAGTCTCTTGGACCTCAGGCCTGCAGACTCAGAGTTCCCCAGATaGGGATGTCTCTGCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: TLQKTNNITSLLDLRPADSEFPR*GCLCSL Trigger: CAGAGAGCAGAGACATCCCAATCTGGGGAACTCTGA...GTCTGCAGGCCTGAGGTCCAAGAGACTTGTGATGTTATTTGTTTTCTGTAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS-3UTR CAA 90 bp | GTGAGGTTTATAAAAGAGTCACGACCTCCTGCACCGACACAGAAACACTTAGAAATGAACGCACCAGGTTaGAAGGTAATGAGGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: VRFIKESRPPAPTQKHLEMNAPG*KVMRQV Trigger: GACCTGCCTCATTACCTTCAAACCTGGTGCGTTCAT...TTCTAAGTGTTTCTGTGTCGGTGCAGGAGGTCGTGACTCTTTTATAAACCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS GCA 72 bp | GCCAAGGTGAGGATAGCAGCCTCAGTAGGCAGGGCCTaGCGCCCCTTCACAGCTACACGGTGGAAGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: AKVRIAASVGRA*RPFTATRWKPP Trigger: TGGCGGCTTCCACCGTGTAGCTGTGAAGGGGCGGCAGGCCCTGCCTACTGAGGCTGCTATCCTCACCTTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS CCA 72 bp | CGGATGGGGAACAGCGTCAACGTCATGAAAGCCACCTaGGCCTTCTGCAGGGCGCTCAGTCGCAGCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: RMGNSVNVMKAT*AFCRALSRSSC Trigger: GCACGAGCTGCGACTGAGCGCCCTGCAGAAGGCCCAGGTGGCTTTCATGACGTTGACGCTGTTCCCCATCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
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| CDS CCA 72 bp | GTAGGCAGGGCCTGCCGCCCCTTCACAGCTACACGGTaGAAGCCGCCAGCAAACCACATGGTGCGCATGATG | + |
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Preference number: 6 (lower is better) Translates to: VGRACRPFTATR*KPPANHMVRMM Trigger: CATCATGCGCACCATGTGGTTTGCTGGCGGCTTCCACCGTGTAGCTGTGAAGGGGCGGCAGGCCCTGCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022099.15 ENSMUST00000123766.8 ENSMUST00000223060.2 |
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| CDS GCA 72 bp | AACAGCGTCAACGTCATGAAAGCCACCTGGGCCTTCTaGAGGGCGCTCAGTCGCAGCTCGTGCACGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: NSVNVMKATWAF*RALSRSSCTKG Trigger: CCCCTTCGTGCACGAGCTGCGACTGAGCGCCCTGCAGAAGGCCCAGGTGGCTTTCATGACGTTGACGCTGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022099.15 |
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| CDS CAA 90 bp | ACACGGTGGAAGCCGCCAGCAAACCACATGGTGCGCATGATGGCCTaGAGCAGGAAGTCCACGACCTTCCTCCATAAGGCCAGGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TRWKPPANHMVRMMA*SRKSTTFLHKARGC Trigger: GCAGCCCCTGGCCTTATGGAGGAAGGTCGTGGACTTCCTGCTCAAGGCCATCATGCGCACCATGTGGTTTGCTGGCGGCTTCCACCGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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| CDS CAA 72 bp | AAGCCGCCAGCAAACCACATGGTGCGCATGATGGCCTaGAGCAGGAAGTCCACGACCTTCCTCCATAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: KPPANHMVRMMA*SRKSTTFLHKA Trigger: GGCCTTATGGAGGAAGGTCGTGGACTTCCTGCTCAAGGCCATCATGCGCACCATGTGGTTTGCTGGCGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022099.15 ENSMUST00000223060.2 |
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