Pregenerated sensors for LPAR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067714Ensembl transcript IDs: ENSMUST00000088292.7, ENSMUST00000140346.9, ENSMUST00000171989.3
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGATTGGCCAGCAGGAGGCGCACGGTCTTCCGTCGCCGTTGGCTCTaGGTGGCGTCGGGCCTCGCCAGTGTCCAGAAGACTCTGCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: RLASRRRTVFRRRWL*VASGLASVQKTLPD Trigger: GTCTGGCAGAGTCTTCTGGACACTGGCGAGGCCCGACGCCACTCAGAGCCAACGGCGACGGAAGACCGTGCGCCTCCTGCTGGCCAATCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS GCA 90 bp | CACAGGCGCACAGTGATGTTCTTGTACGTGCAGTGGGACGGGCTGTaGACGCGGGCGGCGGGCACAGCGAACAGCAGGATGAGAGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: HRRTVMFLYVQWDGL*TRAAGTANSRMRAH Trigger: GTGGGCTCTCATCCTGCTGTTCGCTGTGCCCGCCGCCCGCGTGCACAGCCCGTCCCACTGCACGTACAAGAACATCACTGTGCGCCTGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CCA 90 bp | TGGCCAGCAGGAGGCGCACGGTCTTCCGTCGCCGTTGGCTCTGAGTaGCGTCGGGCCTCGCCAGTGTCCAGAAGACTCTGCCAGACGAAT | + |
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Preference number: 5 (lower is better) Translates to: WPAGGARSSVAVGSE*RRASPVSRRLCQTN Trigger: ATTCGTCTGGCAGAGTCTTCTGGACACTGGCGAGGCCCGACGCCACTCAGAGCCAACGGCGACGGAAGACCGTGCGCCTCCTGCTGGCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS TCA 90 bp | GCGGGGCGCCCAGGTTGCGAAGGGTGTTACGGAAACCCTCGGCACTaGAGTAGTAAACCAGTGGATCCAGCACGCAGTTGGCGCCGGCCA | + |
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Preference number: 5 (lower is better) Translates to: AGRPGCEGCYGNPRH*SSKPVDPARSWRRP Trigger: TGGCCGGCGCCAACTGCGTGCTGGATCCACTGGTTTACTACTTCAGTGCCGAGGGTTTCCGTAACACCCTTCGCAACCTGGGCGCCCCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS GCA 90 bp | GTTGGCTCTGAGTGGCGTCGGGCCTCGCCAGTGTCCAGAAGACTCTaGCAGACGAATAGACGACAGCCGCCAGGGGCAGCAGAAAGCCTA | + |
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Preference number: 5 (lower is better) Translates to: VGSEWRRASPVSRRL*QTNRRQPPGAAESL Trigger: TAGGCTTTCTGCTGCCCCTGGCGGCTGTCGTCTATTCGTCTGGCAGAGTCTTCTGGACACTGGCGAGGCCCGACGCCACTCAGAGCCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS TCA 90 bp | GAGCAAGTCGCTGGCTGCCAGGTTGCACATGTACACGCTCACCACTaGGTGTACGCGCAGTACACGCAGGAAGACCCAGAGAGCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: EQVAGCQVAHVHAHH*VYAQYTQEDPESQS Trigger: GCTCTGGCTCTCTGGGTCTTCCTGCGTGTACTGCGCGTACACTCAGTGGTGAGCGTGTACATGTGCAACCTGGCAGCCAGCGACTTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 90 bp | CATGTTCATCTGGAAGATGGCGCCCGACGTCTGGCACAGGAAGCCTaGAAAAGGCCAGTGGTGCTGTGCATAGTAGGAGAGGCGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: HVHLEDGARRLAQEA*KRPVVLCIVGEAQG Trigger: CCCCTGCGCCTCTCCTACTATGCACAGCACCACTGGCCTTTTCCAGGCTTCCTGTGCCAGACGTCGGGCGCCATCTTCCAGATGAACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 90 bp | CCGGGGGTGTACCCAGAGTGGCAGGCTGGAGTAGAACCTGACTTGTaGCATCCTGCCCAGTGTTTTGGGTGCTTTCTGAGGGTAGTTCGG | + |
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Preference number: 5 (lower is better) Translates to: PGVYPEWQAGVEPDL*HPAQCFGCFLRVVR Trigger: CCGAACTACCCTCAGAAAGCACCCAAAACACTGGGCAGGATGCCACAAGTCAGGTTCTACTCCAGCCTGCCACTCTGGGTACACCCCCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS TCA 90 bp | AGTGGTGCTGTGCATAGTAGGAGAGGCGCAGGGGAAGTGACAGGGTaGAGAGCAAGTCGCTGGCTGCCAGGTTGCACATGTACACGCTCA | + |
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Preference number: 5 (lower is better) Translates to: SGAVHSRRGAGEVTG*RASRWLPGCTCTRS Trigger: TGAGCGTGTACATGTGCAACCTGGCAGCCAGCGACTTGCTCTTCACCCTGTCACTTCCCCTGCGCCTCTCCTACTATGCACAGCACCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS TCA 90 bp | CAGTTGTCCGGGGGTGTACCCAGAGTGGCAGGCTGGAGTAGAACCTaGCTTGTGGCATCCTGCCCAGTGTTTTGGGTGCTTTCTGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: QLSGGVPRVAGWSRT*LVASCPVFWVLSEG Trigger: ACCCTCAGAAAGCACCCAAAACACTGGGCAGGATGCCACAAGTCAGGTTCTACTCCAGCCTGCCACTCTGGGTACACCCCCGGACAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS TCA 90 bp | AGTGTACGCGCAGTACACGCAGGAAGACCCAGAGAGCCAGAGCGTTaGGAGGGAGACCAGTCGCCAATACCAGGCTGTAGACCACCATAT | + |
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Preference number: 5 (lower is better) Translates to: SVRAVHAGRPREPER*EGDQSPIPGCRPPY Trigger: ATATGGTGGTCTACAGCCTGGTATTGGCGACTGGTCTCCCTCTCAACGCTCTGGCTCTCTGGGTCTTCCTGCGTGTACTGCGCGTACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS TCA 90 bp | AAAAGGCCAGTGGTGCTGTGCATAGTAGGAGAGGCGCAGGGGAAGTaGCAGGGTGAAGAGCAAGTCGCTGGCTGCCAGGTTGCACATGTA | + |
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Preference number: 5 (lower is better) Translates to: KRPVVLCIVGEAQGK*QGEEQVAGCQVAHV Trigger: TACATGTGCAACCTGGCAGCCAGCGACTTGCTCTTCACCCTGTCACTTCCCCTGCGCCTCTCCTACTATGCACAGCACCACTGGCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 90 bp | GCGAAGGGTGTTACGGAAACCCTCGGCACTGAAGTAGTAAACCAGTaGATCCAGCACGCAGTTGGCGCCGGCCAGCAGCACCATTATCAT | + |
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Preference number: 5 (lower is better) Translates to: AKGVTETLGTEVVNQ*IQHAVGAGQQHHYH Trigger: ATGATAATGGTGCTGCTGGCCGGCGCCAACTGCGTGCTGGATCCACTGGTTTACTACTTCAGTGCCGAGGGTTTCCGTAACACCCTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CCA 90 bp | ACGTTGATGAGCATCAGAAAGAGACAGCTGCCGTACATGTTCATCTaGAAGATGGCGCCCGACGTCTGGCACAGGAAGCCTGGAAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: TLMSIRKRQLPYMFI*KMAPDVWHRKPGKG Trigger: GCCTTTTCCAGGCTTCCTGTGCCAGACGTCGGGCGCCATCTTCCAGATGAACATGTACGGCAGCTGTCTCTTTCTGATGCTCATCAACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS TCA 90 bp | GTCAGGGCACTGGAGCACAGAGCTGTTGGTAGAAGTCGTGTTGGCTaGAGAATTGGCAAACATCATGTCCAGGTGGGAAGAGAAATTAGT | + |
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Preference number: 5 (lower is better) Translates to: VRALEHRAVGRSRVG*RIGKHHVQVGREIS Trigger: ACTAATTTCTCTTCCCACCTGGACATGATGTTTGCCAATTCTTCAGCCAACACGACTTCTACCAACAGCTCTGTGCTCCAGTGCCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS TCA 72 bp | TGTGCACGCGGGCGGCGGGCACAGCGAACAGCAGGATaGGAGCCCACACGCCCAGGCAGAGCCGCCGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: CARGRRAQRTAG*EPTRPGRAAVP Trigger: TGGCACGGCGGCTCTGCCTGGGCGTGTGGGCTCTCATCCTGCTGTTCGCTGTGCCCGCCGCCCGCGTGCACA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CCA 72 bp | GGAGGCGCACGGTCTTCCGTCGCCGTTGGCTCTGAGTaGCGTCGGGCCTCGCCAGTGTCCAGAAGACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GGARSSVAVGSE*RRASPVSRRLC Trigger: GCAGAGTCTTCTGGACACTGGCGAGGCCCGACGCCACTCAGAGCCAACGGCGACGGAAGACCGTGCGCCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CAA 72 bp | ATTGGCCAGCAGGAGGCGCACGGTCTTCCGTCGCCGTaGGCTCTGAGTGGCGTCGGGCCTCGCCAGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: IGQQEAHGLPSP*ALSGVGPRQCP Trigger: TGGACACTGGCGAGGCCCGACGCCACTCAGAGCCAACGGCGACGGAAGACCGTGCGCCTCCTGCTGGCCAAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS TCA 72 bp | AGCAGGAGGCGCACGGTCTTCCGTCGCCGTTGGCTCTaGGTGGCGTCGGGCCTCGCCAGTGTCCAGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: SRRRTVFRRRWL*VASGLASVQKT Trigger: AGTCTTCTGGACACTGGCGAGGCCCGACGCCACTCAGAGCCAACGGCGACGGAAGACCGTGCGCCTCCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS GCA 72 bp | GAGTGGCGTCGGGCCTCGCCAGTGTCCAGAAGACTCTaGCAGACGAATAGACGACAGCCGCCAGGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: EWRRASPVSRRL*QTNRRQPPGAA Trigger: TGCTGCCCCTGGCGGCTGTCGTCTATTCGTCTGGCAGAGTCTTCTGGACACTGGCGAGGCCCGACGCCACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS GCA 72 bp | ACAGTGATGTTCTTGTACGTGCAGTGGGACGGGCTGTaGACGCGGGCGGCGGGCACAGCGAACAGCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: TVMFLYVQWDGL*TRAAGTANSRM Trigger: CATCCTGCTGTTCGCTGTGCCCGCCGCCCGCGTGCACAGCCCGTCCCACTGCACGTACAAGAACATCACTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CAA 72 bp | TCTGAGGGTAGTTCGGTGAGCACGCCTGCAGCCCCATaGGTAGCCAAAGGCCTGGTATTCAGCGGGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SEGSSVSTPAAP*VAKGLVFSGAP Trigger: GGGCGCCCCGCTGAATACCAGGCCTTTGGCTACCAATGGGGCTGCAGGCGTGCTCACCGAACTACCCTCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CAA 90 bp | GATGATGAGATTGGCCAGCAGGAGGCGCACGGTCTTCCGTCGCCGTaGGCTCTGAGTGGCGTCGGGCCTCGCCAGTGTCCAGAAGACTCT | + |
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Preference number: 6 (lower is better) Translates to: DDEIGQQEAHGLPSP*ALSGVGPRQCPEDS Trigger: AGAGTCTTCTGGACACTGGCGAGGCCCGACGCCACTCAGAGCCAACGGCGACGGAAGACCGTGCGCCTCCTGCTGGCCAATCTCATCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CAA 72 bp | CTGAAGCTCTCGAAGCACAGGCGCACAGTGATGTTCTaGTACGTGCAGTGGGACGGGCTGTGCACGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LKLSKHRRTVMF*YVQWDGLCTRA Trigger: CGCCCGCGTGCACAGCCCGTCCCACTGCACGTACAAGAACATCACTGTGCGCCTGTGCTTCGAGAGCTTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CAA 90 bp | CGCAGGGGAAGTGACAGGGTGAAGAGCAAGTCGCTGGCTGCCAGGTaGCACATGTACACGCTCACCACTGAGTGTACGCGCAGTACACGC | + |
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Preference number: 6 (lower is better) Translates to: RRGSDRVKSKSLAAR*HMYTLTTECTRSTR Trigger: GCGTGTACTGCGCGTACACTCAGTGGTGAGCGTGTACATGTGCAACCTGGCAGCCAGCGACTTGCTCTTCACCCTGTCACTTCCCCTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS TCA 72 bp | GCTGGCTGCCAGGTTGCACATGTACACGCTCACCACTaGGTGTACGCGCAGTACACGCAGGAAGACCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: AGCQVAHVHAHH*VYAQYTQEDPE Trigger: CTCTGGGTCTTCCTGCGTGTACTGCGCGTACACTCAGTGGTGAGCGTGTACATGTGCAACCTGGCAGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS TCA 72 bp | GTGGTGCTGTGCATAGTAGGAGAGGCGCAGGGGAAGTaGCAGGGTGAAGAGCAAGTCGCTGGCTGCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VVLCIVGEAQGK*QGEEQVAGCQV Trigger: AACCTGGCAGCCAGCGACTTGCTCTTCACCCTGTCACTTCCCCTGCGCCTCTCCTACTATGCACAGCACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 72 bp | CTGGAAGATGGCGCCCGACGTCTGGCACAGGAAGCCTaGAAAAGGCCAGTGGTGCTGTGCATAGTAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LEDGARRLAQEA*KRPVVLCIVGE Trigger: CTCTCCTACTATGCACAGCACCACTGGCCTTTTCCAGGCTTCCTGTGCCAGACGTCGGGCGCCATCTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 72 bp | GTTACGGAAACCCTCGGCACTGAAGTAGTAAACCAGTaGATCCAGCACGCAGTTGGCGCCGGCCAGCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VTETLGTEVVNQ*IQHAVGAGQQH Trigger: GTGCTGCTGGCCGGCGCCAACTGCGTGCTGGATCCACTGGTTTACTACTTCAGTGCCGAGGGTTTCCGTAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS TCA 72 bp | GTGCATAGTAGGAGAGGCGCAGGGGAAGTGACAGGGTaGAGAGCAAGTCGCTGGCTGCCAGGTTGCACATGT | + |
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Preference number: 6 (lower is better) Translates to: VHSRRGAGEVTG*RASRWLPGCTC Trigger: ACATGTGCAACCTGGCAGCCAGCGACTTGCTCTTCACCCTGTCACTTCCCCTGCGCCTCTCCTACTATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 72 bp | CCGTACATGTTCATCTGGAAGATGGCGCCCGACGTCTaGCACAGGAAGCCTGGAAAAGGCCAGTGGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PYMFIWKMAPDV*HRKPGKGQWCC Trigger: ACAGCACCACTGGCCTTTTCCAGGCTTCCTGTGCCAGACGTCGGGCGCCATCTTCCAGATGAACATGTACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CAA 72 bp | AGTGACAGGGTGAAGAGCAAGTCGCTGGCTGCCAGGTaGCACATGTACACGCTCACCACTGAGTGTACGCGC | + |
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Preference number: 6 (lower is better) Translates to: SDRVKSKSLAAR*HMYTLTTECTR Trigger: GCGCGTACACTCAGTGGTGAGCGTGTACATGTGCAACCTGGCAGCCAGCGACTTGCTCTTCACCCTGTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CAA 90 bp | TGTCCGGGGGTGTACCCAGAGTGGCAGGCTGGAGTAGAACCTGACTaGTGGCATCCTGCCCAGTGTTTTGGGTGCTTTCTGAGGGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: CPGVYPEWQAGVEPD*WHPAQCFGCFLRVV Trigger: AACTACCCTCAGAAAGCACCCAAAACACTGGGCAGGATGCCACAAGTCAGGTTCTACTCCAGCCTGCCACTCTGGGTACACCCCCGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CCA 72 bp | GAAAGAGACAGCTGCCGTACATGTTCATCTGGAAGATaGCGCCCGACGTCTGGCACAGGAAGCCTGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: ERDSCRTCSSGR*RPTSGTGSLEK Trigger: CTTTTCCAGGCTTCCTGTGCCAGACGTCGGGCGCCATCTTCCAGATGAACATGTACGGCAGCTGTCTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 72 bp | AGCATCAGAAAGAGACAGCTGCCGTACATGTTCATCTaGAAGATGGCGCCCGACGTCTGGCACAGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SIRKRQLPYMFI*KMAPDVWHRKP Trigger: AGGCTTCCTGTGCCAGACGTCGGGCGCCATCTTCCAGATGAACATGTACGGCAGCTGTCTCTTTCTGATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CCA 72 bp | TACCCAGAGTGGCAGGCTGGAGTAGAACCTGACTTGTaGCATCCTGCCCAGTGTTTTGGGTGCTTTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: YPEWQAGVEPDL*HPAQCFGCFLR Trigger: CCTCAGAAAGCACCCAAAACACTGGGCAGGATGCCACAAGTCAGGTTCTACTCCAGCCTGCCACTCTGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CAA 72 bp | GTGTACCCAGAGTGGCAGGCTGGAGTAGAACCTGACTaGTGGCATCCTGCCCAGTGTTTTGGGTGCTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VYPEWQAGVEPD*WHPAQCFGCFL Trigger: CAGAAAGCACCCAAAACACTGGGCAGGATGCCACAAGTCAGGTTCTACTCCAGCCTGCCACTCTGGGTACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088292.7 ENSMUST00000171989.3 |
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| CDS CAA 72 bp | GGGCACTGGAGCACAGAGCTGTTGGTAGAAGTCGTGTaGGCTGAAGAATTGGCAAACATCATGTCCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GHWSTELLVEVV*AEELANIMSRW Trigger: CCACCTGGACATGATGTTTGCCAATTCTTCAGCCAACACGACTTCTACCAACAGCTCTGTGCTCCAGTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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| CDS CAA 72 bp | ACAGAGCTGTTGGTAGAAGTCGTGTTGGCTGAAGAATaGGCAAACATCATGTCCAGGTGGGAAGAGAAATTA | + |
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Preference number: 6 (lower is better) Translates to: TELLVEVVLAEE*ANIMSRWEEKL Trigger: TAATTTCTCTTCCCACCTGGACATGATGTTTGCCAATTCTTCAGCCAACACGACTTCTACCAACAGCTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000088292.7 ENSMUST00000140346.9 ENSMUST00000171989.3 |
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