Pregenerated sensors for LPAR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031861Ensembl transcript IDs: ENSMUST00000034325.6, ENSMUST00000164890.8, ENSMUST00000238452.2
Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCCAGGGGCAGGCAGACTCTCTCTGTCCCTGGGGCAGGGAGTGTTaGAGAGCCATGCATCTGCTGGGCTGGCTTGAGTCAGAGGCTCTG | + |
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Preference number: 1 (lower is better) Translates to: VQGQADSLCPWGREC*RAMHLLGWLESEAL Trigger: CAGAGCCTCTGACTCAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAGGGACAGAGAGAGTCTGCCTGCCCCTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CCA 90 bp | AACCCCGACTCCTCTCTGGTGAGGCAGAGCAGGGAGCCAAGTTCATaGCTCACACTGCCTGCTAGGAGGCTTCTCTGGCGAGGGAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: NPDSSLVRQSREPSS*LTLPARRLLWRGRE Trigger: CTCCCTCCCTCGCCAGAGAAGCCTCCTAGCAGGCAGTGTGAGCCATGAACTTGGCTCCCTGCTCTGCCTCACCAGAGAGGAGTCGGGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR TCA 90 bp | GACCCTGCTATGTTGACTAAGGTGGCCCTGCCTTCAGGGCTGACTTaGCACATCTCCAGCCTCCACATGCAGAGGTGCATCCACGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: DPAMLTKVALPSGLT*HISSLHMQRCIHAS Trigger: ACTTGCGTGGATGCACCTCTGCATGTGGAGGCTGGAGATGTGTCAAGTCAGCCCTGAAGGCAGGGCCACCTTAGTCAACATAGCAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR GCA 90 bp | AAGGTGGGCCCAGAGTGTACAAAAGGTCAGACAGTGGCCCAGCACTaGACAGGCCTGATCTGGGGGAGGGAGAAGACTGTAAGTTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: KVGPECTKGQTVAQH*TGLIWGREKTVSSN Trigger: ATTGGAACTTACAGTCTTCTCCCTCCCCCAGATCAGGCCTGTGCAGTGCTGGGCCACTGTCTGACCTTTTGTACACTCTGGGCCCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR GCA 90 bp | GTCTGCCTCATGGCTTGTGACCTCTCGGTCTCTAGTACTGGAGCCTaGTTCTTCCTCCATGTTGGGCTTCTAGAGCCTGACTCCTTCAGA | + |
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Preference number: 1 (lower is better) Translates to: VCLMACDLSVSSTGA*FFLHVGLLEPDSFR Trigger: TCTGAAGGAGTCAGGCTCTAGAAGCCCAACATGGAGGAAGAAGCAGGCTCCAGTACTAGAGACCGAGAGGTCACAAGCCATGAGGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CCA 90 bp | ACACTGTCCTTCATGGACACCTGGCTGCAGGGACACTGTCCTTCATaGACACCTGGCTTCAGGGACACTGTCCTTAATGAACACCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: TLSFMDTWLQGHCPS*TPGFRDTVLNEHLA Trigger: AGCCAGGTGTTCATTAAGGACAGTGTCCCTGAAGCCAGGTGTCCATGAAGGACAGTGTCCCTGCAGCCAGGTGTCCATGAAGGACAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR GCA 90 bp | TCTCCTGCCTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGATaGCCAGTGAGACTAGCTGTATTGGTGAGCTCTGGATGTGACAGA | + |
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Preference number: 1 (lower is better) Translates to: SPALEGRDRGLLRTR*PVRLAVLVSSGCDR Trigger: TCTGTCACATCCAGAGCTCACCAATACAGCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAGGCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CCA 90 bp | ATAGCTGTGCTTTTCCAAGCTGTGCAGTCAGACACAGGCTCAATATaGCTTGTCATTCCTAGCACTCAGGGAGCCCAGGCAGGAAGAGAC | + |
|
Preference number: 1 (lower is better) Translates to: IAVLFQAVQSDTGSI*LVIPSTQGAQAGRD Trigger: GTCTCTTCCTGCCTGGGCTCCCTGAGTGCTAGGAATGACAAGCCATATTGAGCCTGTGTCTGACTGCACAGCTTGGAAAAGCACAGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR TCA 90 bp | GGAGTCAGGACCATCAAGAGTTCAAGGCCATCCTCACCTACACAGTaGATTCAAGGCCGCCTAGGCTACATGAGAGCCTATCTCAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: GVRTIKSSRPSSPTQ*IQGRLGYMRAYLKS Trigger: GCTTTTGAGATAGGCTCTCATGTAGCCTAGGCGGCCTTGAATTCACTGTGTAGGTGAGGATGGCCTTGAACTCTTGATGGTCCTGACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CCA 90 bp | GTCCTTAATGAACACCTGGCTGCAGAGGTTCCTGGGCTATCACCTTaGAACATGAGGCACAGTTTTGCCAACTGCAGAGAGTTTCTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: VLNEHLAAEVPGLSP*NMRHSFANCREFLW Trigger: CCACAGAAACTCTCTGCAGTTGGCAAAACTGTGCCTCATGTTCCAAGGTGATAGCCCAGGAACCTCTGCAGCCAGGTGTTCATTAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR GCA 90 bp | ACAAAGAAGCAAAGGCCCACTGCAATCCAGCCCTTCAGTTCGGTCTaGACTGTTTTCCTTTTGGACATGGCTCACGTGATAGAAGATCTG | + |
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Preference number: 1 (lower is better) Translates to: TKKQRPTAIQPFSSV*TVFLLDMAHVIEDL Trigger: CAGATCTTCTATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAACTGAAGGGCTGGATTGCAGTGGGCCTTTGCTTCTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR TCA 90 bp | CACACACACACACACAAATCCCTCTCTAGAGATACAGAGCCTCCCTaGATGTTTGCTCAGAGACAGAATTCAGGTGAAGGCTTGGTGAAG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHKSLSRDTEPP*MFAQRQNSGEGLVK Trigger: CTTCACCAAGCCTTCACCTGAATTCTGTCTCTGAGCAAACATTCAGGGAGGCTCTGTATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CCA 90 bp | CACCACAGCACAAGTGTGATGTGTTTGTACATCATAGCCCAAGTGTaGAGGTCAGAGAACAACTTTCAGGACTTGGGTCTCTACTACCAT | + |
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Preference number: 1 (lower is better) Translates to: HHSTSVMCLYIIAQV*RSENNFQDLGLYYH Trigger: ATGGTAGTAGAGACCCAAGTCCTGAAAGTTGTTCTCTGACCTCCACACTTGGGCTATGATGTACAAACACATCACACTTGTGCTGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR GCA 90 bp | CTAGCTCGTACAACTTCTACTAACACATTTATATTATTCCATGTCTaGCTCATGGCTTGTGACCTCTCGGTCTCTAGTACTGGAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LARTTSTNTFILFHV*LMACDLSVSSTGAC Trigger: GCAGGCTCCAGTACTAGAGACCGAGAGGTCACAAGCCATGAGGCAGACATGGAATAATATAAATGTGTTAGTAGAAGTTGTACGAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CCA 90 bp | GAAAGAAACATTTGTAAGACTCCAGGAAGAGACAAAAACTGGGTATaGCAGCATATAGCTCTAATCCCAACATCTACAATTCGGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: ERNICKTPGRDKNWV*QHIALIPTSTIRRQ Trigger: TTGCCTCCGAATTGTAGATGTTGGGATTAGAGCTATATGCTGCCATACCCAGTTTTTGTCTCTTCCTGGAGTCTTACAAATGTTTCTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR TCA 90 bp | TACAAAAACATATTAGTGGTCCAAACTTGTGAGGTCATGCATGAATaGACGCAGTTCTTGATTCAACATGGCAATGACCATATCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: YKNILVVQTCEVMHE*TQFLIQHGNDHIQP Trigger: AGGCTGGATATGGTCATTGCCATGTTGAATCAAGAACTGCGTTCATTCATGCATGACCTCACAAGTTTGGACCACTAATATGTTTTTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR TCA 90 bp | ATCATCTTCCCTCCCCCACCTTCATTATGGGTCTATAATCTTTATTaGGGAGAGTGGTCCTATGCATATGTCCTGTATTTGTACAAAAAC | + |
|
Preference number: 1 (lower is better) Translates to: IIFPPPPSLWVYNLY*GEWSYAYVLYLYKN Trigger: GTTTTTGTACAAATACAGGACATATGCATAGGACCACTCTCCTCAATAAAGATTATAGACCCATAATGAAGGTGGGGGAGGGAAGATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CCA 90 bp | CAAAAGGAAAGAAACATTTGTAAGACTCCAGGAAGAGACAAAAACTaGGTATGGCAGCATATAGCTCTAATCCCAACATCTACAATTCGG | + |
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Preference number: 1 (lower is better) Translates to: QKERNICKTPGRDKN*VWQHIALIPTSTIR Trigger: CCGAATTGTAGATGTTGGGATTAGAGCTATATGCTGCCATACCCAGTTTTTGTCTCTTCCTGGAGTCTTACAAATGTTTCTTTCCTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR GCA 90 bp | CTGACTGTAGAAAGAAAGAGACGTTTTCCGTTCTTAAGAAACAGATaGTTTAATGCCTTAAGAATTTGGCCTCAGATAAGACAGAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: LTVERKRRFPFLRNR*FNALRIWPQIRQRF Trigger: GAACCTCTGTCTTATCTGAGGCCAAATTCTTAAGGCATTAAAGCATCTGTTTCTTAAGAACGGAAAACGTCTCTTTCTTTCTACAGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCATGGACACCTGGCTTCAGGGACACTGTCCTTAATGAACACCTGGCTGCACCGACTCCTCTCTGGTaGGGCAGAGCAGGGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: PSWTPGFRDTVLNEHLAAPTPLW*GRAGSQ Trigger: TTGGCTCCCTGCTCTGCCTCACCAGAGAGGAGTCGG...TGCAGCCAGGTGTTCATTAAGGACAGTGTCCCTGAAGCCAGGTGTCCATGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGATCTGTGCTGGGGAACTTGCCTAGAGTGTGCAAGGTCCTAGCTGTGGGACCGACTCCTCTCTGGTaGGGCAGAGCAGGGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: RRSVLGNLPRVCKVLAVGPTPLW*GRAGSQ Trigger: TTGGCTCCCTGCTCTGCCTCACCAGAGAGGAGTCGG...TCCCACAGCTAGGACCTTGCACACTCTAGGCAAGTTCCCCAGCACAGATCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CAA 90 bp | GGAGGGAGGGAGGGAGTTAACCTCAGGCCTGGCATATCTGAGGTCTaGGGGGACTCAGAAGTAGAAAGTCCAAGGGACACTGAAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GGREGVNLRPGISEV*GDSEVESPRDTEAL Trigger: AAGGGCTTCAGTGTCCCTTGGACTTTCTACTTCTGAGTCCCCCAAGACCTCAGATATGCCAGGCCTGAGGTTAACTCCCTCCCTCCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGTCCAAGGGACACTGAAGCCCTTCCTCATGGAGTTTTCTGGTGCCCCCTGCACCATAGGCTGCAGATaGAGCTCCAGTCTCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: KVQGTLKPFLMEFSGAPCTIGCR*SSSLLP Trigger: AGGCAGGAGACTGGAGCTTCATCTGCAGCCTATGGT...GCAGGGGGCACCAGAAAACTCCATGAGGAAGGGCTTCAGTGTCCCTTGGACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGATCTGTGCTGGGGAACTTGCCTAGAGTGTGCAAGGTCCTAGCTGTGGGATCTGCTGGGCTGGCTTaGGTCAGAGGCTCTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: RRSVLGNLPRVCKVLAVGSAGLA*VRGSAS Trigger: ACTTGCAGAGCCTCTGACTCAAGCCAGCCCAGCAGA...TCCCACAGCTAGGACCTTGCACACTCTAGGCAAGTTCCCCAGCACAGATCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGATGCCCAGTGAGACTAGCGTAGGTGGTATAGCCTaGGACAGCTCTCACCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LGGQRQGIAQNKMPSETSVGGIA*DSSHLF Trigger: GAAGAGGTGAGAGCTGTCCCAGGCTATACCACCTAC...GCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGTCCAAGGGACACTGAAGCCCTTCCTCATGGAGTTTTCTGGTGCCCCCTGCGTAGGTGGTATAGCCTaGGACAGCTCTCACCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: KVQGTLKPFLMEFSGAPCVGGIA*DSSHLF Trigger: GAAGAGGTGAGAGCTGTCCCAGGCTATACCACCTAC...GCAGGGGGCACCAGAAAACTCCATGAGGAAGGGCTTCAGTGTCCCTTGGACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | GGATTGAACTCTTGTTGCCAGGCTTGGCAGGAAGCGCTTCTCCCTGCTGAGTTCGGCTGGCTGGGGCCATaGGATTTCATGTTGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: GLNSCCQAWQEALLPAEFGWLGP*DFMLKD Trigger: ATCCTTCAACATGAAATCCCATGGCCCCAGCCAGCC...GAACTCAGCAGGGAGAAGCGCTTCCTGCCAAGCCTGGCAACAAGAGTTCAATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCATGGACACCTGGCTTCAGGGACACTGTCCTTAATGAACACCTGGCTGCAAGGGAGCCAAGTTCATaGCTCACACTGCCTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: PSWTPGFRDTVLNEHLAAREPSS*LTLPAR Trigger: CCTAGCAGGCAGTGTGAGCCATGAACTTGGCTCCCT...TGCAGCCAGGTGTTCATTAAGGACAGTGTCCCTGAAGCCAGGTGTCCATGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGTATATCTCCTGCCTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGGGACACTGTCCTTCATaGACACCTGGCTTCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PEYISCLGGQRQGIAQNKGHCPS*TPGFRD Trigger: GTCCCTGAAGCCAGGTGTCCATGAAGGACAGTGTCC...CTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATACTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CAA 90 bp | AGTTCAAGGCTGGCTGGGGCCATGGGATTTCATGTTGAAGGATTCTaGGCAGCCCTGAGTCATGATTCCAGGACACTGGGACAGACTGAC | + |
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Preference number: 2 (lower is better) Translates to: SSRLAGAMGFHVEGF*AALSHDSRTLGQTD Trigger: GTCAGTCTGTCCCAGTGTCCTGGAATCATGACTCAGGGCTGCCAAGAATCCTTCAACATGAAATCCCATGGCCCCAGCCAGCCTTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCAGCACATCTAAGGAATCAGCTTCAGTACTAGCACTTGGGAGTCAGGACTGGGGCAGGGAGTGTTaGAGAGCCATGCATCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLSTSKESASVLALGSQDWGREC*RAMHLL Trigger: CAGCAGATGCATGGCTCTTCAACACTCCCTGCCCCA...GTCCTGACTCCCAAGTGCTAGTACTGAAGCTGATTCCTTAGATGTGCTGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGATGGCAGGAAGGAAGCTAGAATCCAGTACCTTTCTCCACTGGAGAAGTTAACTAAGGGAGGCAGGTaGGCCCTCAGGCTGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: VDGRKEARIQYLSPLEKLTKGGR*ALRLLS Trigger: GCTGAGCAGCCTGAGGGCTCACCTGCCTCCCTTAGT...TAACTTCTCCAGTGGAGAAAGGTACTGGATTCTAGCTTCCTTCCTGCCATCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTGATCTTTGTGAGTTAGAGGCCAGCCAGTGCTACACAGTGAGTCCCTGTGATTCTTGGCAGCCCTaGGTCATGATTCCAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: QADLCELEASQCYTVSPCDSWQP*VMIPGH Trigger: GTGTCCTGGAATCATGACTCAGGGCTGCCAAGAATC...ACAGGGACTCACTGTGTAGCACTGGCTGGCCTCTAACTCACAAAGATCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTGATCTTTGTGAGTTAGAGGCCAGCCAGTGCTACACAGTGAGTCCCTGTCACCCATCCCTAAAGTaGCCCATGTCCAGTATGCCT | + |
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Preference number: 2 (lower is better) Translates to: QADLCELEASQCYTVSPCHPSLK*PMSSMP Trigger: AGGCATACTGGACATGGGTCACTTTAGGGATGGGTG...ACAGGGACTCACTGTGTAGCACTGGCTGGCCTCTAACTCACAAAGATCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTCCTTCAGGGCTGACTTaGCACATCTCCAGCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: HTAEKSRKSQARAMAQYFPSGLT*HISSLH Trigger: GTGGAGGCTGGAGATGTGTCAAGTCAGCCCTGAAGG...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGCCTGCCTGGACTACAGATTGAGTTCCAGGACAACCAGGGCCTCAGAGCCTTTGAGAAACAGGTaGAAACTGAGGCTAGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: RPACLDYRLSSRTTRASEPLRNR*KLRLAF Trigger: AAAGGCTAGCCTCAGTTTTCACCTGTTTCTCAAAGG...CTCTGAGGCCCTGGTTGTCCTGGAACTCAATCTGTAGTCCAGGCAGGCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
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| 3UTR CAA 90 bp | AGTGTCCTGAGTATATCTCCTGCCTTGGAGGGCAGAGACAGGGGATaGCTCAGAACAAGATGCCCAGTGAGACTAGCTGTATTGGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SVLSISPALEGRDRG*LRTRCPVRLAVLVS Trigger: GCTCACCAATACAGCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATACTCAGGACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTAGGGAGCCAAGTTCATaGCTCACACTGCCTGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: HTAEKSRKSQARAMAQYFREPSS*LTLPAR Trigger: CCTAGCAGGCAGTGTGAGCCATGAACTTGGCTCCCT...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTTCCTTCATGGACACCTaGCTGCAGGGACACTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: HTAEKSRKSQARAMAQYFSFMDT*LQGHCP Trigger: AGGACAGTGTCCCTGCAGCCAGGTGTCCATGAAGGA...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGAAGTAATAGAAGCCTTTAAGGTGGGCCCAGAGTGTACAAAAGGTCAGGGACACTGTCCTTCATaGACACCTGGCTGCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PQEVIEAFKVGPECTKGQGHCPS*TPGCRD Trigger: GTCCCTGCAGCCAGGTGTCCATGAAGGACAGTGTCC...CTGACCTTTTGTACACTCTGGGCCCACCTTAAAGGCTTCTATTACTTCCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCATCTGCCTTTTGTTCTTACTGAAGAGGAAACTCAAGCAGCATGTGTGTACTAAGGGAGGCAGGTaGGCCCTCAGGCTGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: QVICLLFLLKRKLKQHVCTKGGR*ALRLLS Trigger: GCTGAGCAGCCTGAGGGCTCACCTGCCTCCCTTAGT...ACACACATGCTGCTTGAGTTTCCTCTTCAGTAAGAACAAAAGGCAGATGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCATGGACACCTGGCTTCAGGGACACTGTCCTTAATGAACACCTGGCTGCAAGGCAGGAAGAGACCTaGGAGTTTGATATTAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PSWTPGFRDTVLNEHLAARQEET*EFDISL Trigger: CAGGCTAATATCAAACTCTCAGGTCTCTTCCTGCCT...TGCAGCCAGGTGTTCATTAAGGACAGTGTCCCTGAAGCCAGGTGTCCATGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTGGCTGGCTGGGGCCATaGGATTTCATGTTGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: HTAEKSRKSQARAMAQYFGWLGP*DFMLKD Trigger: ATCCTTCAACATGAAATCCCATGGCCCCAGCCAGCC...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGATAGAAGATCTGTGCTGGGGAACTTGCCTAGAGTGTGCAAGGTCCTAGCTAAGTTCAAGGCTGGCTaGGGCCATGGGATTTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: RDRRSVLGNLPRVCKVLAKFKAG*GHGISC Trigger: ACATGAAATCCCATGGCCCCAGCCAGCCTTGAACTT...AGCTAGGACCTTGCACACTCTAGGCAAGTTCCCCAGCACAGATCTTCTATCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGTGGGAAAAGCCGGGCACTGACTGTAGAAAGAAAGAGACGTTTTCCGTTCCCTCATGGAGTTTTCTaGTGCCCCCTGCATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SCGKSRALTVERKRRFPFPHGVF*CPLHSC Trigger: ACAGCTATGCAGGGGGCACCAGAAAACTCCATGAGG...GAACGGAAAACGTCTCTTTCTTTCTACAGTCAGTGCCCGGCTTTTCCCACAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATATCTGCTGGGCTGGCTTaGGTCAGAGGCTCTGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: PKKGHTHTHTHTNPSLEISAGLA*VRGSAS Trigger: ACTTGCAGAGCCTCTGACTCAAGCCAGCCCAGCAGA...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATAGGCAGCCCTGAGTCATaGTTCCAGGACACTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: PKKGHTHTHTHTNPSLEIGSPES*FQDTGT Trigger: TGTCCCAGTGTCCTGGAATCATGACTCAGGGCTGCC...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAGGCAGCCCTGAGTCATaGTTCCAGGACACTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTGSPES*FQDTGT Trigger: TGTCCCAGTGTCCTGGAATCATGACTCAGGGCTGCC...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATACAGGTGAAGGCTTGGTaGAGGGTCAGTGTGACTGCG | + |
|
Preference number: 2 (lower is better) Translates to: PKKGHTHTHTHTNPSLEIQVKAW*RVSVTA Trigger: CGCAGTCACACTGACCCTTCACCAAGCCTTCACCTG...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACAGGAAGTAATAGAAGCCTTTAAGGTGGGCCCAGAGTGTACAAAAGGTCAGAGTGTTGAAGAGCCATaGATCTGCTGGGCTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: PQEVIEAFKVGPECTKGQSVEEP*ICWAGL Trigger: CAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACT...CTGACCTTTTGTACACTCTGGGCCCACCTTAAAGGCTTCTATTACTTCCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCTGATCTTTGTGAGTTAGAGGCCAGCCAGTGCTACACAGTGAGTCCCTGTCATGAGGCACAGTTTTaGCAACTGCAGAGAGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: QADLCELEASQCYTVSPCHEAQF*QLQRVS Trigger: AGAAACTCTCTGCAGTTGGCAAAACTGTGCCTCATG...ACAGGGACTCACTGTGTAGCACTGGCTGGCCTCTAACTCACAAAGATCAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAGACAGAGCTGACTTCTaGAGGCCATCAGAGGTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTDRADF*RPSEVP Trigger: GGGGACCTCTGATGGCCTGCAGAAGTCAGCTCTGTC...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCAATGCTCAGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTGTATATCTCCTGCCTTaGAGGGCAGAGACAGGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: INAQVYPKTENSHRPFVSVYLLP*RAETGD Trigger: ATCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATAC...AGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCTGAGCATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTAGGCAGGAAGAGACCTaGGAGTTTGATATTAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: HTAEKSRKSQARAMAQYFRQEET*EFDISL Trigger: CAGGCTAATATCAAACTCTCAGGTCTCTTCCTGCCT...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGACAAAAGCTTGATGTCACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAATGCATCTGCTGGGCTaGCTTGAGTCAGAGGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KRQKLDVTQQRSQGKARLMHLLG*LESEAL Trigger: CAGAGCCTCTGACTCAAGCCAGCCCAGCAGATGCAT...TAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGACAAAAGCTTGATGTCACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTACAGCAAGTTCAAGGCTaGCTGGGGCCATGGGATTTC | + |
|
Preference number: 2 (lower is better) Translates to: KRQKLDVTQQRSQGKARLQQVQG*LGPWDF Trigger: GAAATCCCATGGCCCCAGCCAGCCTTGAACTTGCTG...TAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGACAAAAGCTTGATGTCACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGACACTGTCCTTCATaGACACCTGGCTTCAGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KRQKLDVTQQRSQGKARLGHCPS*TPGFRD Trigger: GTCCCTGAAGCCAGGTGTCCATGAAGGACAGTGTCC...TAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | AATCCCTCTCTAGAGATACAGAGCCTCCCTGAATGTTTGCTCAGAGACAGAATTTCCTTCATGGACACCTaGCTGCAGGGACACTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NPSLEIQSLPECLLRDRISFMDT*LQGHCP Trigger: AGGACAGTGTCCCTGCAGCCAGGTGTCCATGAAGGA...AATTCTGTCTCTGAGCAAACATTCAGGGAGGCTCTGTATCTCTAGAGAGGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | GTAGATGGCAGGAAGGAAGCTAGAATCCAGTACCTTTCTCCACTGGAGAAGTTATCCCTGGATAGCATCTaGATGGTGCTGATGGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: VDGRKEARIQYLSPLEKLSLDSI*MVLMED Trigger: GTCCTCCATCAGCACCATCCAGATGCTATCCAGGGA...TAACTTCTCCAGTGGAGAAAGGTACTGGATTCTAGCTTCCTTCCTGCCATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGCCTGCCTGGACTACAGATTGAGTTCCAGGACAACCAGGGCCTCAGAGACAAAAAGACCGATAAATaGTTTCCTTTGAGAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ASLPGLQIEFQDNQGLRDKKTDK*FPLRNR Trigger: CCTGTTTCTCAAAGGAAACCATTTATCGGTCTTTTT...GTCTCTGAGGCCCTGGTTGTCCTGGAACTCAATCTGTAGTCCAGGCAGGCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGCGCTTGCTACTCAAGTTTGAAGACCAGAATTCAGAACCTCAGAAATCCACAACCATAGGCTGCAGATaGAGCTCCAGTCTCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KRLLLKFEDQNSEPQKSTTIGCR*SSSLLP Trigger: AGGCAGGAGACTGGAGCTTCATCTGCAGCCTATGGT...TGTGGATTTCTGAGGTTCTGAATTCTGGTCTTCAAACTTGAGTAGCAAGCGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | CCACAGGAAGTAATAGAAGCCTTTAAGGTGGGCCCAGAGTGTACAAAAGGTCAGTTTTTCAAGGGTGTATaGATGCTAGGGCCCCATAGG | + |
|
Preference number: 2 (lower is better) Translates to: PQEVIEAFKVGPECTKGQFFKGV*MLGPHR Trigger: CCTATGGGGCCCTAGCATTCATACACCCTTGAAAAA...CTGACCTTTTGTACACTCTGGGCCCACCTTAAAGGCTTCTATTACTTCCTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCCACCCATCCCTAAAGTaGCCCATGTCCAGTATGCCT | + |
|
Preference number: 2 (lower is better) Translates to: STQVQKSVNHKALSFNPSHPSLK*PMSSMP Trigger: AGGCATACTGGACATGGGTCACTTTAGGGATGGGTG...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAAGTGTTGAAGAGCCATaGATCTGCTGGGCTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTSVEEP*ICWAGL Trigger: CAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACT...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCCAAGTCCCATTAGGATaGTCTCCCCAGGTGCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: STQVQKSVNHKALSFNPSQVPLG*SPQVHG Trigger: TCCATGCACCTGGGGAGAGCATCCTAATGGGACTTG...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCGGTCTGCACTGTTTTCCTTTTGGACATGGCTCACGTGATAGAAGATCTGTGACCAAACCCCAACTCTaGAACCTCAGAGTGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: FGLHCFPFGHGSRDRRSVTKPQL*NLRVER Trigger: CCTTTCCACTCTGAGGTTGCAGAGTTGGGGTTTGGT...CACAGATCTTCTATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATACATGGAGTTTTCTGGTaGCCCCTGCATAGCTGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PKKGHTHTHTHTNPSLEIHGVFW*PLHSCA Trigger: AGCACAGCTATGCAGGGGGCACCAGAAAACTCCATG...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAGCAGAGACAGGGGATTaGTCAGAACAAGATGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTAETGD*SEQDAQ Trigger: CTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGC...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGACAAAAGCTTGATGTCACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGCAGAGACAGGGGATTaGTCAGAACAAGATGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KRQKLDVTQQRSQGKARLAETGD*SEQDAQ Trigger: CTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGC...TAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTCATCTGCCTTTTGTTCTTACTGAAGAGGAAACTCAAGCAGCATGTGTGTATGCATCTGCTGGGCTaGCTTGAGTCAGAGGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QVICLLFLLKRKLKQHVCMHLLG*LESEAL Trigger: CAGAGCCTCTGACTCAAGCCAGCCCAGCAGATGCAT...ACACACATGCTGCTTGAGTTTCCTCTTCAGTAAGAACAAAAGGCAGATGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATACCTCATGGAGTTTTCTaGTGCCCCCTGCATAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PKKGHTHTHTHTNPSLEIPHGVF*CPLHSC Trigger: ACAGCTATGCAGGGGGCACCAGAAAACTCCATGAGG...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCAATGCTCAGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTCATGAGGCACAGTTTTaGCAACTGCAGAGAGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: INAQVYPKTENSHRPFVSHEAQF*QLQRVS Trigger: AGAAACTCTCTGCAGTTGGCAAAACTGTGCCTCATG...AGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCTGAGCATTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCGCTTGCTACTCAAGTTTGAAGACCAGAATTCAGAACCTCAGAAATCCACATCCTTCATGGACACCTaGCTTCAGGGACACTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KRLLLKFEDQNSEPQKSTSFMDT*LQGHCP Trigger: AGGACAGTGTCCCTGAAGCCAGGTGTCCATGAAGGA...TGTGGATTTCTGAGGTTCTGAATTCTGGTCTTCAAACTTGAGTAGCAAGCGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCGCTTGCTACTCAAGTTTGAAGACCAGAATTCAGAACCTCAGAAATCCACAAACTTGCCTAGAGTGTaGAAGGTCCTAGCTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KRLLLKFEDQNSEPQKSTNLPRV*KVLAVG Trigger: TCCCACAGCTAGGACCTTGCACACTCTAGGCAAGTT...TGTGGATTTCTGAGGTTCTGAATTCTGGTCTTCAAACTTGAGTAGCAAGCGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGACAAAAGCTTGATGTCACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTACCCTTCAGTTCGGTCTaGACTGTTTTCCTTTTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: KRQKLDVTQQRSQGKARLPFSSV*TVFLLD Trigger: GTCCAAAAGGAAAACAGTGCAGACCGAACTGAAGGG...TAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CAA 90 bp | CACACACACAATGTGTTTACACACCACAGCACAAGTGTGATGTGTTaGTACATCATAGCCCAAGTGTGGAGGTCAGAGAACAACTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HTHNVFTHHSTSVMC*YIIAQVWRSENNFQ Trigger: CTGAAAGTTGTTCTCTGACCTCCACACTTGGGCTATGATGTACAAACACATCACACTTGTGCTGTGGTGTGTAAACACATTGTGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGTGGTTGGTTGATCATAGTTTGTTAGTAGTTGTGCTCAAAGAAGAAACAGGAGATTCTTGGCAGCCCTaGGTCATGATTCCAGGACAC | + |
|
Preference number: 2 (lower is better) Translates to: VWLVDHSLLVVVLKEETGDSWQP*VMIPGH Trigger: GTGTCCTGGAATCATGACTCAGGGCTGCCAAGAATC...TCCTGTTTCTTCTTTGAGCACAACTACTAACAAACTATGATCAACCAACCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTAATCCCAACATCTACAATTCGGAGGCAAGACAATGGATTCAAGAACAGCCTCATGGGATTTCATGTTaGAGGATTCTTGGCAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SNPNIYNSEARQWIQEQPHGISC*RILGSP Trigger: AGGGCTGCCAAGAATCCTTCAACATGAAATCCCATG...AGGCTGTTCTTGAATCCATTGTCTTGCCTCCGAATTGTAGATGTTGGGATTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAGATGGCAGGAAGGAAGCTAGAATCCAGTACCTTTCTCCACTGGAGAAGTTATGTCTCTCTTGTTTGTaGGTCCTAAAAAGGGACACA | + |
|
Preference number: 2 (lower is better) Translates to: VDGRKEARIQYLSPLEKLCLSCL*VLKRDT Trigger: TGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACA...TAACTTCTCCAGTGGAGAAAGGTACTGGATTCTAGCTTCCTTCCTGCCATCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | CGTTTTCCGTTCTTAAGAAACAGATGCTTTAATGCCTTAAGAATTTGGCCTCAGCAAGTCCCATTAGGATaGTCTCCCCAGGTGCATGGA | + |
|
Preference number: 2 (lower is better) Translates to: RFPFLRNRCFNALRIWPQQVPLG*SPQVHG Trigger: TCCATGCACCTGGGGAGAGCATCCTAATGGGACTTG...CTGAGGCCAAATTCTTAAGGCATTAAAGCATCTGTTTCTTAAGAACGGAAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCCACAGTTTTGCCAACTaGAGAGAGTTTCTGTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: STQVQKSVNHKALSFNPSHSFAN*REFLWL Trigger: CAACCACAGAAACTCTCTGCAGTTGGCAAAACTGTG...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTTCTACTAACACATTTATATTATTCCATGTCTGCCTCATGGCTTGTGACCTCTCATGGACACCTGGCTaGAGGGACACTGTCCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: TSTNTFILFHVCLMACDLSWTPG*RDTVLH Trigger: ATGAAGGACAGTGTCCCTGCAGCCAGGTGTCCATGA...GAGGTCACAAGCCATGAGGCAGACATGGAATAATATAAATGTGTTAGTAGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACCTTCCATGCTTACCCCAACTCTGAATAAAGATACAGAGACATGTTTATTTCCCTGTAACAGTAGGTaGTATAGCCTGGGACAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GPSMLTPTLNKDTETCLFPCNSR*YSLGQL Trigger: GAGCTGTCCCAGGCTATACCACCTACTGTTACAGGG...AAATAAACATGTCTCTGTATCTTTATTCAGAGTTGGGGTAAGCATGGAAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAATGATTCCAGGACACTaGGACAGACTGACTGAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTMIPGH*DRLTEV Trigger: TACTTCAGTCAGTCTGTCCCAGTGTCCTGGAATCAT...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGATTACAAGAATGCTAGCCTGCCCTATCCCTTGAGAGACAAAGGCAAAAAGGGCTACATGAGACTCTaGCTGAAACACAATCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: TDYKNASLPYPLRDKGKKGYMRL*LKHNQT Trigger: TGTTTGATTGTGTTTCAGGCAGAGTCTCATGTAGCC...CTTTTTGCCTTTGTCTCTCAAGGGATAGGGCAGGCTAGCATTCTTGTAATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTTCTACTAACACATTTATATTATTCCATGTCTGCCTCATGGCTTGTGACCTCGCCTCCCTGAATGTTTaGTCAGAGACAGAATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TSTNTFILFHVCLMACDLASLNV*SETEFR Trigger: CCTGAATTCTGTCTCTGAGCAAACATTCAGGGAGGC...GAGGTCACAAGCCATGAGGCAGACATGGAATAATATAAATGTGTTAGTAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCAATGCCTTAAGAATTTaGCCTCAGATAAGACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: STQVQKSVNHKALSFNPSNALRI*PQIRQR Trigger: CCTCTGTCTTATCTGAGGCCAAATTCTTAAGGCATT...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGACAAAAGCTTGATGTCACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAAATGCCTTAAGAATTTaGCCTCAGATAAGACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KRQKLDVTQQRSQGKARLNALRI*PQIRQR Trigger: CCTCTGTCTTATCTGAGGCCAAATTCTTAAGGCATT...TAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATAGTTTCTGTGGTTGTGTaGTGTTTAGAATTCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: PKKGHTHTHTHTNPSLEIVSVVV*CLEFWK Trigger: TTTCCAGAATTCTAAACATCACACAACCACAGAAAC...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACCTTCCATGCTTACCCCAACTCTGAATAAAGATACAGAGACATGTTTATTTCACAGTTTTGCCAACTaGAGAGAGTTTCTGTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: GPSMLTPTLNKDTETCLFHSFAN*REFLWL Trigger: CAACCACAGAAACTCTCTGCAGTTGGCAAAACTGTG...AAATAAACATGTCTCTGTATCTTTATTCAGAGTTGGGGTAAGCATGGAAGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTTCTACTAACACATTTATATTATTCCATGTCTGCCTCATGGCTTGTGACCTCAAAGAGACAAAAGCTTaGTGTCACACAGCAGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TSTNTFILFHVCLMACDLKETKA*CHTAEK Trigger: CTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTTT...GAGGTCACAAGCCATGAGGCAGACATGGAATAATATAAATGTGTTAGTAGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACCTTCCATGCTTACCCCAACTCTGAATAAAGATACAGAGACATGTTTATTTGGAAGAGACAAAAACTaGGTATGGCAGCATATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GPSMLTPTLNKDTETCLFGRDKN*VWQHIA Trigger: AGCTATATGCTGCCATACCCAGTTTTTGTCTCTTCC...AAATAAACATGTCTCTGTATCTTTATTCAGAGTTGGGGTAAGCATGGAAGGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCTACTAACACATTTATATTATTCCATGTCTGCCTCATGGCTTGTGACCTCGGAAGAGACAAAAACTaGGTATGGCAGCATATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: TSTNTFILFHVCLMACDLGRDKN*VWQHIA Trigger: AGCTATATGCTGCCATACCCAGTTTTTGTCTCTTCC...GAGGTCACAAGCCATGAGGCAGACATGGAATAATATAAATGTGTTAGTAGAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CCA 72 bp | AGTTCATGGCTCACACTGCCTGCTAGGAGGCTTCTCTaGCGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSWLTLPARRLL*RGREGGREGGR Trigger: CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGCCAGAGAAGCCTCCTAGCAGGCAGTGTGAGCCATGAACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034325.6 |
||
| 3UTR CCA 72 bp | CGGCCAAGTCCCATTAGGATGCTCTCCCCAGGTGCATaGACGGAGATGTCCCCAAGTCCCTCTGTCCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPSPIRMLSPGA*TEMSPSPSVQG Trigger: CCCCTGGACAGAGGGACTTGGGGACATCTCCGTCCATGCACCTGGGGAGAGCATCCTAATGGGACTTGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | CTCTCTGTCCCTGGGGCAGGGAGTGTTGAAGAGCCATaGATCTGCTGGGCTGGCTTGAGTCAGAGGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSVPGAGSVEEP*ICWAGLSQRLC Trigger: GCAGAGCCTCTGACTCAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAGGGACAGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | GGAGTGTTGAAGAGCCATGCATCTGCTGGGCTGGCTTaGGTCAGAGGCTCTGCAAGTGACCATAGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GVLKSHASAGLA*VRGSASDHRLQ Trigger: CTGCAGCCTATGGTCACTTGCAGAGCCTCTGACTCAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | CTGTGTCATGGGGTCCCTCGTACTAAGGGAGGCAGGTaGGCCCTCAGGCTGCTCAGCACATCTAAGGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: LCHGVPRTKGGR*ALRLLSTSKES Trigger: TGATTCCTTAGATGTGCTGAGCAGCCTGAGGGCTCACCTGCCTCCCTTAGTACGAGGGACCCCATGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | CCAGAGTGTACAAAAGGTCAGACAGTGGCCCAGCACTaGACAGGCCTGATCTGGGGGAGGGAGAAGACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PECTKGQTVAQH*TGLIWGREKTV Trigger: TACAGTCTTCTCCCTCCCCCAGATCAGGCCTGTGCAGTGCTGGGCCACTGTCTGACCTTTTGTACACTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | CTTTGGAGTCTGCTTGGGAAACACCCCCTCCCTTATTaGTTCAGGGTCCCAGGGTCCTATGGCAAGTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWSLLGKHPLPY*FRVPGSYGKSP Trigger: AGGGGACTTGCCATAGGACCCTGGGACCCTGAAGCAATAAGGGAGGGGGTGTTTCCCAAGCAGACTCCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| 3UTR CCA 72 bp | GGTCAGACAGTGGCCCAGCACTGCACAGGCCTGATCTaGGGGAGGGAGAAGACTGTAAGTTCCAATGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GQTVAQHCTGLI*GREKTVSSNGL Trigger: TAGACCATTGGAACTTACAGTCTTCTCCCTCCCCCAGATCAGGCCTGTGCAGTGCTGGGCCACTGTCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | GCACTTGGGAGTCAGGACCATCAAGAGTTCAAGGCCATCCTCACCTACACAGTGATCTGCTGGGCTGGCTaGAGTCAGAGGCTCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ALGSQDHQEFKAILTYTVICWAG*SQRLCK Trigger: CTTGCAGAGCCTCTGACTCAAGCCAGCCCAGCAGAT...CACTGTGTAGGTGAGGATGGCCTTGAACTCTTGATGGTCCTGACTCCCAAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | GGATTGAACTCTTGTTGCCAGGCTTGGCAGGAAGCGCTTCTCCCTGCTGAGTTCTCAGAGTGGAAAGGCTaGCTCTGTGTCATGGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GLNSCCQAWQEALLPAEFSEWKG*LCVMGS Trigger: GGACCCCATGACACAGAGCAAGCCTTTCCACTCTGA...GAACTCAGCAGGGAGAAGCGCTTCCTGCCAAGCCTGGCAACAAGAGTTCAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | GGATTGAACTCTTGTTGCCAGGCTTGGCAGGAAGCGCTTCTCCCTGCTGAGTTCAGTATATCTCCTGCCTaGGAGGGCAGAGACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLNSCCQAWQEALLPAEFSISPA*EGRDRG Trigger: TCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATACT...GAACTCAGCAGGGAGAAGCGCTTCCTGCCAAGCCTGGCAACAAGAGTTCAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | ATGTTGACTAAGGTGGCCCTGCCTTCAGGGCTGACTTaGCACATCTCCAGCCTCCACATGCAGAGGTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: MLTKVALPSGLT*HISSLHMQRCI Trigger: GATGCACCTCTGCATGTGGAGGCTGGAGATGTGTCAAGTCAGCCCTGAAGGCAGGGCCACCTTAGTCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | ATGGCTTGTGACCTCTCGGTCTCTAGTACTGGAGCCTaGTTCTTCCTCCATGTTGGGCTTCTAGAGCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: MACDLSVSSTGA*FFLHVGLLEPD Trigger: GTCAGGCTCTAGAAGCCCAACATGGAGGAAGAAGCAGGCTCCAGTACTAGAGACCGAGAGGTCACAAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CCA 72 bp | GAACACCTGGCTGCAGAGGTTCCTGGGCTATCACCTTaGAACATGAGGCACAGTTTTGCCAACTGCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EHLAAEVPGLSP*NMRHSFANCRE Trigger: CTCTCTGCAGTTGGCAAAACTGTGCCTCATGTTCCAAGGTGATAGCCCAGGAACCTCTGCAGCCAGGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | TTTTGGGTTGAAGGCCAGCCTGCCTGGACTACAGATTaGGTTCCAGGACAACCAGGGCCTCAGAGACCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FWVEGQPAWTTD*VPGQPGPQRPY Trigger: ATAAGGTCTCTGAGGCCCTGGTTGTCCTGGAACTCAATCTGTAGTCCAGGCAGGCTGGCCTTCAACCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| 3UTR GCA 72 bp | GGACAGCCACTAAGGACAGGTGACAGAGCTGACTTCTaGAGGCCATCAGAGGTCCCCAAATCAGGATTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: GQPLRTGDRADF*RPSEVPKSGFN Trigger: ATTGAATCCTGATTTGGGGACCTCTGATGGCCTGCAGAAGTCAGCTCTGTCACCTGTCCTTAGTGGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | TTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGATaGCCAGTGAGACTAGCTGTATTGGTGAGCTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LEGRDRGLLRTR*PVRLAVLVSSG Trigger: TCCAGAGCTCACCAATACAGCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCAATGCTCAGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTCTGGGGCAGGGAGTGTaGAAGAGCCATGCATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: INAQVYPKTENSHRPFVSLGQGV*KSHASA Trigger: AGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAG...AGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCTGAGCATTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTAGTATATCTCCTGCCTaGGAGGGCAGAGACAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HTAEKSRKSQARAMAQYFSISPA*EGRDRG Trigger: TCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATACT...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGATGCCCAGTGAGACTAGCTGCACTGTTTTCCTTTaGGACATGGCTCACGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: LGGQRQGIAQNKMPSETSCTVFL*DMAHVI Trigger: TATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCA...GCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | CAAAGGCCCACTGCAATCCAGCCCTTCAGTTCGGTCTaGACTGTTTTCCTTTTGGACATGGCTCACGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: QRPTAIQPFSSV*TVFLLDMAHVI Trigger: TATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAACTGAAGGGCTGGATTGCAGTGGGCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CCA 72 bp | GAACCAGGGACTTTATTGAGGTTCCTCCCCAATGCATaGGCAGCTCCAGCAGAAATGTATCATCTTCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: EPGTLLRFLPNA*AAPAEMYHLPS Trigger: GGAGGGAAGATGATACATTTCTGCTGGAGCTGCCCATGCATTGGGGAGGAACCTCAATAAAGTCCCTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAATCTGCTGGGCTGGCTaGAGTCAGAGGCTCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTICWAG*SQRLCK Trigger: CTTGCAGAGCCTCTGACTCAAGCCAGCCCAGCAGAT...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAAGGAAAACCCTAGGCTaGGCCCCAGCCACAGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTRKTLG*APATGS Trigger: ACTTCCTGTGGCTGGGGCCAAGCCTAGGGTTTTCCT...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | ACCATCAAGAGTTCAAGGCCATCCTCACCTACACAGTaGATTCAAGGCCGCCTAGGCTACATGAGAGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TIKSSRPSSPTQ*IQGRLGYMRAY Trigger: ATAGGCTCTCATGTAGCCTAGGCGGCCTTGAATTCACTGTGTAGGTGAGGATGGCCTTGAACTCTTGATGGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | CCATGGGATTTCATGTTGAAGGATTCTTGGCAGCCCTaGGTCATGATTCCAGGACACTGGGACAGACTGACT | + |
|
Preference number: 3 (lower is better) Translates to: PWDFMLKDSWQP*VMIPGHWDRLT Trigger: AGTCAGTCTGTCCCAGTGTCCTGGAATCATGACTCAGGGCTGCCAAGAATCCTTCAACATGAAATCCCATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGCTTGCTACTCAAGTTTGAAGACCAGAATTCAGAACCTCAGAAATCCACACTGGGGCAGGGAGTGTaGAAGAGCCATGCATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: KRLLLKFEDQNSEPQKSTLGQGV*KSHASA Trigger: AGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAG...TGTGGATTTCTGAGGTTCTGAATTCTGGTCTTCAAACTTGAGTAGCAAGCGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCGGTCTGCACTGTTTTCCTTTTGGACATGGCTCACGTGATAGAAGATCTGTGCAGGCTCAATATGGCTaGTCATTCCTAGCACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FGLHCFPFGHGSRDRRSVQAQYG*SFLALR Trigger: CCTGAGTGCTAGGAATGACAAGCCATATTGAGCCTG...CACAGATCTTCTATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | AACCAACCAGGGCTGAGGATGGCAACTGATTACAAGAATGCTAGCCTGCCCTATGGCATTTTTACCTCTTaGGAGTCTGCTTGGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: NQPGLRMATDYKNASLPYGIFTS*ESAWET Trigger: TGTTTCCCAAGCAGACTCCAAAGAGGTAAAAATGCC...ATAGGGCAGGCTAGCATTCTTGTAATCAGTTGCCATCCTCAGCCCTGGTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTCCAGGACAACCAGGGCCTCAGAGACCTTATCTCACAAAACAAAACAACAAGCCTGCCCTATCCCTaGAGAGACAAAGGCAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: EFQDNQGLRDLISQNKTTSLPYP*RDKGKK Trigger: CTTTTTGCCTTTGTCTCTCAAGGGATAGGGCAGGCT...TGTTGTTTTGTTTTGTGAGATAAGGTCTCTGAGGCCCTGGTTGTCCTGGAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCCCATGGGATTTCATGTaGAAGGATTCTTGGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: STQVQKSVNHKALSFNPSPWDFM*KDSWQP Trigger: GGGCTGCCAAGAATCCTTCAACATGAAATCCCATGG...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGACAAAAGCTTGATGTCACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTACCATGGGATTTCATGTaGAAGGATTCTTGGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KRQKLDVTQQRSQGKARLPWDFM*KDSWQP Trigger: GGGCTGCCAAGAATCCTTCAACATGAAATCCCATGG...TAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTGACATCAAGCTTTTGTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGGAAGTAATAGAAGCCTTTAAGGTGGGCCCAGAGTGTACAAAAGGTCAGTGCACTGTTTTCCTTTaGGACATGGCTCACGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: PQEVIEAFKVGPECTKGQCTVFL*DMAHVI Trigger: TATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCA...CTGACCTTTTGTACACTCTGGGCCCACCTTAAAGGCTTCTATTACTTCCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | GACTGCGAAGTCAAGTCATCTGCCTTTTGTTCTTACTaGAGAGGAAACTCAAGCAGCATGTGTGTATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: DCEVKSSAFCSY*RGNSSSMCVWG Trigger: CCCCCATACACACATGCTGCTTGAGTTTCCTCTTCAGTAAGAACAAAAGGCAGATGACTTGACTTCGCAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | ACACACAAATCCCTCTCTAGAGATACAGAGCCTCCCTaGATGTTTGCTCAGAGACAGAATTCAGGTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: THKSLSRDTEPP*MFAQRQNSGEG Trigger: GCCTTCACCTGAATTCTGTCTCTGAGCAAACATTCAGGGAGGCTCTGTATCTCTAGAGAGGGATTTGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | CAGCATCTGGGTAATAGGAAGACATGCTTTATACAGTaGACAAAAAGGTTATCCCTCCACCGTGCCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: QHLGNRKTCFIQ*TKRLSLHRAFP Trigger: GGGAAAGGCACGGTGGAGGGATAACCTTTTTGTGCACTGTATAAAGCATGTCTTCCTATTACCCAGATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | AGAGAACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTaGGTCCTAAAAAGGGACACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: RELSQAFCLSCL*VLKRDTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGTTCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CCA 72 bp | ACAAGTGTGATGTGTTTGTACATCATAGCCCAAGTGTaGAGGTCAGAGAACAACTTTCAGGACTTGGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TSVMCLYIIAQV*RSENNFQDLGL Trigger: GAGACCCAAGTCCTGAAAGTTGTTCTCTGACCTCCACACTTGGGCTATGATGTACAAACACATCACACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCGGTCTGCACTGTTTTCCTTTTGGACATGGCTCACGTGATAGAAGATCTGTGGCAGAAGGAGAAGGTTaGCACAAACTAGAAATCATC | + |
|
Preference number: 3 (lower is better) Translates to: FGLHCFPFGHGSRDRRSVAEGEG*HKLEII Trigger: GATGATTTCTAGTTTGTGCAAACCTTCTCCTTCTGC...CACAGATCTTCTATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CCA 72 bp | CTACTAACACATTTATATTATTCCATGTCTGCCTCATaGCTTGTGACCTCTCGGTCTCTAGTACTGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLTHLYYSMSAS*LVTSRSLVLEP Trigger: AGGCTCCAGTACTAGAGACCGAGAGGTCACAAGCCATGAGGCAGACATGGAATAATATAAATGTGTTAGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGAAACATTTGTAAGACTCCAGGAAGAGACAAAAACTGGGTATGGCAGCATCATGTTGAAGGATTCTaGGCAGCCCTGAGTCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: ERNICKTPGRDKNWVWQHHVEGF*AALSHD Trigger: ATCATGACTCAGGGCTGCCAAGAATCCTTCAACATG...ATGCTGCCATACCCAGTTTTTGTCTCTTCCTGGAGTCTTACAAATGTTTCTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGGTTGGTTGATCATAGTTTGTTAGTAGTTGTGCTCAAAGAAGAAACAGGACAGGCTCAATATGGCTaGTCATTCCTAGCACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VWLVDHSLLVVVLKEETGQAQYG*SFLALR Trigger: CCTGAGTGCTAGGAATGACAAGCCATATTGAGCCTG...TCCTGTTTCTTCTTTGAGCACAACTACTAACAAACTATGATCAACCAACCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | CCTCCCCCACCTTCATTATGGGTCTATAATCTTTATTaGGGAGAGTGGTCCTATGCATATGTCCTGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: PPPPSLWVYNLY*GEWSYAYVLYL Trigger: CAAATACAGGACATATGCATAGGACCACTCTCCTCAATAAAGATTATAGACCCATAATGAAGGTGGGGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCCCTCTCTAGAGATACAGAGCCTCCCTGAATGTTTGCTCAGAGACAGAATTCAAGTCATCTGCCTTTaGTTCTTACTGAAGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NPSLEIQSLPECLLRDRIQVICL*FLLKRK Trigger: TTTCCTCTTCAGTAAGAACAAAAGGCAGATGACTTG...AATTCTGTCTCTGAGCAAACATTCAGGGAGGCTCTGTATCTCTAGAGAGGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | CAGTTTTGCCAACTGCAGAGAGTTTCTGTGGTTGTGTaGTGTTTAGAATTCTGGAAACTTTTTCAAGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: QFCQLQRVSVVV*CLEFWKLFQGC Trigger: ACACCCTTGAAAAAGTTTCCAGAATTCTAAACATCACACAACCACAGAAACTCTCTGCAGTTGGCAAAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | GGCTCAGTACTTTTTAAAGCGCTTGCTACTCAAGTTTaGAGACCAGAATTCAGAACCTCAGAAATCCACATA | + |
|
Preference number: 3 (lower is better) Translates to: GSVLFKALATQV*RPEFRTSEIHI Trigger: TATGTGGATTTCTGAGGTTCTGAATTCTGGTCTTCAAACTTGAGTAGCAAGCGCTTTAAAAAGTACTGAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR TCA 72 bp | ATATTAGTGGTCCAAACTTGTGAGGTCATGCATGAATaGACGCAGTTCTTGATTCAACATGGCAATGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ILVVQTCEVMHE*TQFLIQHGNDH Trigger: ATGGTCATTGCCATGTTGAATCAAGAACTGCGTTCATTCATGCATGACCTCACAAGTTTGGACCACTAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACCTTCCATGCTTACCCCAACTCTGAATAAAGATACAGAGACATGTTTATTTATGAAAAGTGTAGATTaGTGTAGATGGCAGGAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GPSMLTPTLNKDTETCLFMKSVD*CRWQEG Trigger: TCCTTCCTGCCATCTACACAAATCTACACTTTTCAT...AAATAAACATGTCTCTGTATCTTTATTCAGAGTTGGGGTAAGCATGGAAGGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CCA 72 bp | ATTTGTAAGACTCCAGGAAGAGACAAAAACTGGGTATaGCAGCATATAGCTCTAATCCCAACATCTACAATT | + |
|
Preference number: 3 (lower is better) Translates to: ICKTPGRDKNWV*QHIALIPTSTI Trigger: AATTGTAGATGTTGGGATTAGAGCTATATGCTGCCATACCCAGTTTTTGTCTCTTCCTGGAGTCTTACAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR GCA 72 bp | GAAAGAAAGAGACGTTTTCCGTTCTTAAGAAACAGATaGTTTAATGCCTTAAGAATTTGGCCTCAGATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ERKRRFPFLRNR*FNALRIWPQIR Trigger: TCTTATCTGAGGCCAAATTCTTAAGGCATTAAAGCATCTGTTTCTTAAGAACGGAAAACGTCTCTTTCTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | AGAACCAGACGGCCAAGTCCCATTAGGATGCTCTCCCCAGGTGCATGGACGGAGGCCATCACACTGCGGTaGCGTTCCACAGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTRRPSPIRMLSPGAWTEAITLR*RSTAMA Trigger: GGCCATCGCTGTGGAACGGCACCGCAGTGTGATGGC...CTCCGTCCATGCACCTGGGGAGAGCATCCTAATGGGACTTGGCCGTCTGGTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGGGCAGGGAGTGTTGAAGAGCCATGCATCTGCTGGGCTGGCTTGAGTTGGAGAGCCTGGCAGTaGGTGGGCCAGTATGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VPGAGSVEEPCICWAGLSWRAWQ*VGQYGT Trigger: TGTTCCATACTGGCCCACGCACTGCCAGGCTCTCCA...ACTCAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGAAACACCCCCTCCCTTATTGCTTCAGGGTCCCAGGGTCCTATGGCAAGCCATCACACTGCGGTaGCGTTCCACAGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWETPPPLLLQGPRVLWQAITLR*RSTAMA Trigger: GGCCATCGCTGTGGAACGGCACCGCAGTGTGATGGC...TTGCCATAGGACCCTGGGACCCTGAAGCAATAAGGGAGGGGGTGTTTCCCAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGGGAAACACCCCCTCCCTTATTGCTTCAGGGTCCCAGGGTCCTATGGCAAGCCGTTCCACAGCGATaGCCAGCAGTGTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: AWETPPPLLLQGPRVLWQAVPQR*PAVWPL Trigger: CAGTGGCCACACTGCTGGCCATCGCTGTGGAACGGC...TTGCCATAGGACCCTGGGACCCTGAAGCAATAAGGGAGGGGGTGTTTCCCAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR TCA 90 bp | AGAACCAGACGGCCAAGTCCCATTAGGATGCTCTCCCCAGGTGCATGGACGGAGCACTGCATTGACCAGTaGGTTGGCCTCAGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTRRPSPIRMLSPGAWTEHCIDQ*VGLSQE Trigger: CTCCTGGCTGAGGCCAACTCACTGGTCAATGCAGTG...CTCCGTCCATGCACCTGGGGAGAGCATCCTAATGGGACTTGGCCGTCTGGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCAGCCTGCCTGGACTACAGATTGAGTTCCAGGACAACCAGGGCCTCAGAGTGGAGAGCCTGGCAGTaGGTGGGCCAGTATGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RPACLDYRLSSRTTRASEWRAWQ*VGQYGT Trigger: TGTTCCATACTGGCCCACGCACTGCCAGGCTCTCCA...CTCTGAGGCCCTGGTTGTCCTGGAACTCAATCTGTAGTCCAGGCAGGCTGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGCCTGGACTACAGATTGAGTTCCAGGACAACCAGGGCCTCAGAGACCTTAGCAGGAACCAGCCTTTaGTGGAGAGCCTGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACLDYRLSSRTTRASETLAGTSL*WRAWQC Trigger: GCACTGCCAGGCTCTCCATCAAAGGCTGGTTCCTGC...TAAGGTCTCTGAGGCCCTGGTTGTCCTGGAACTCAATCTGTAGTCCAGGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGGGGCAGGGAGTGTTGAAGAGCCATGCATCTGCTGGGCTGGCTTGAGTCAAGCAGGTAGTATATaGGCTGGTGGAAGCGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPGAGSVEEPCICWAGLSQAGSI*AGGSVG Trigger: ACCGACGCTTCCACCAGCCCATATACTACCTGCTTG...ACTCAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGATGCCCAGTGAGACTAGCGGGCAGACTTGTGGCTaGACCAGCGGAGACACATGC | + |
|
Preference number: 4 (lower is better) Translates to: LGGQRQGIAQNKMPSETSGQTCG*TSGDTC Trigger: GCATGTGTCTCCGCTGGTCCAGCCACAAGTCTGCCC...GCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGTATATCTCCTGCCTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGGCAATACCAGCACACTaGCTGTCAGCCCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PEYISCLGGQRQGIAQNKAIPAH*LSAPGP Trigger: TGGCCCTGGGGCTGACAGTCAGTGTGCTGGTATTGC...CTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATACTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGATCTTTGTGAGTTAGAGGCCAGCCAGTGCTACACAGTGAGTCCCTGTGCAGGAACCAGCCTTTaGTGGAGAGCCTGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QADLCELEASQCYTVSPCAGTSL*WRAWQC Trigger: GCACTGCCAGGCTCTCCATCAAAGGCTGGTTCCTGC...ACAGGGACTCACTGTGTAGCACTGGCTGGCCTCTAACTCACAAAGATCAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGGGCAGGGAGTGTTGAAGAGCCATGCATCTGCTGGGCTGGCTTGAGTCCAGCACACCACAAATaGCCCCAGAATGATGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGAGSVEEPCICWAGLSPAHHK*PQNDDN Trigger: GTTGTCATCATTCTGGGGGCATTTGTGGTGTGCTGG...ACTCAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGATGCCCAGTGAGACTAGCGGTGGAGTCCATCAGTaGGCGGCCATTCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGGQRQGIAQNKMPSETSGGVHQ*AAILRK Trigger: CTTCCTGAGAATGGCCGCCCACTGATGGACTCCACC...GCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CAA 72 bp | TCTTTGGAGTCTGCTTGGGAAACACCCCCTCCCTTATaGCTTCAGGGTCCCAGGGTCCTATGGCAAGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLESAWETPPPL*LQGPRVLWQVP Trigger: GGGGACTTGCCATAGGACCCTGGGACCCTGAAGCAATAAGGGAGGGGGTGTTTCCCAAGCAGACTCCAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR GCA 90 bp | CACTTTCCTTTAATCCCAGCTCTCAGGAGGCAGAGGCAGGCTGATCTTTGTGAGGGAAGAGGTAGGCCATaGCAGCGAAGAGGTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HFPLIPALRRQRQADLCEGRGRP*QRRGQP Trigger: CGGCTGACCTCTTCGCTGGCATGGCCTACCTCTTCC...CTCACAAAGATCAGCCTGCCTCTGCCTCCTGAGAGCTGGGATTAAAGGAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | TGTAGGCTGGCATTTTTACCTCTTTGGAGTCTGCTTGGGAAACACCCCCTCCCTGTACCGCCATCACACTaGGGTGCCGTTCCACAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CRLAFLPLWSLLGKHPLPVPPSH*GAVPQR Trigger: TCGCTGTGGAACGGCACCGCAGTGTGATGGCGGTAC...AGGGAGGGGGTGTTTCCCAAGCAGACTCCAAAGAGGTAAAAATGCCAGCCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR GCA 90 bp | CACTTTCCTTTAATCCCAGCTCTCAGGAGGCAGAGGCAGGCTGATCTTTGTGAGACCAGCGGAGACACATaGAGCAGAGAAGGCGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HFPLIPALRRQRQADLCETSGDT*SREGGG Trigger: TCCGCCGCCTTCTCTGCTGCATGTGTCTCCGCTGGT...CTCACAAAGATCAGCCTGCCTCTGCCTCCTGAGAGCTGGGATTAAAGGAAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | ATCAATGCTCAGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTAGGAGCAGCACCACCTaGCCCGGTGTCCAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: INAQVYPKTENSHRPFVSRSSTT*PGVQHT Trigger: GGTGTGCTGGACACCGGGCCAGGTGGTGCTGCTCCT...AGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCTGAGCATTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CAA 72 bp | CCAAACCCCAACTCTGCAACCTCAGAGTGGAAAGGCTaGCTCTGTGTCATGGGGTCCCTCGTACTAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PNPNSATSEWKG*LCVMGSLVLRE Trigger: CTCCCTTAGTACGAGGGACCCCATGACACAGAGCAAGCCTTTCCACTCTGAGGTTGCAGAGTTGGGGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CAA 72 bp | GGGGACAGGAGCAGTGTCCTGAGTATATCTCCTGCCTaGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GDRSSVLSISPA*EGRDRGLLRTR Trigger: TCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATACTCAGGACACTGCTCCTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGCATTTTTACCTCTTTGGAGTCTGCTTGGGAAACACCCCCTCCCTTATGCAATACCAGCACACTaGCTGTCAGCCCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLAFLPLWSLLGKHPLPYAIPAH*LSAPGP Trigger: TGGCCCTGGGGCTGACAGTCAGTGTGCTGGTATTGC...ATAAGGGAGGGGGTGTTTCCCAAGCAGACTCCAAAGAGGTAAAAATGCCAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGTGGGAAAAGCCGGGCACTGACTGTAGAAAGAAAGAGACGTTTTCCGTTCGCAGGAACCAGCCTTTaGTGGAGAGCCTGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCGKSRALTVERKRRFPFAGTSL*WRAWQC Trigger: GCACTGCCAGGCTCTCCATCAAAGGCTGGTTCCTGC...GAACGGAAAACGTCTCTTTCTTTCTACAGTCAGTGCCCGGCTTTTCCCACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTCATTCTCAGGAAGCATaGTCCGCGTGCTGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTAEKSRKSQARAMAQYFHSQEA*SACWHP Trigger: CGGGTGCCAGCACGCGGATCATGCTTCCTGAGAATG...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGGAAACACCCCCTCCCTTATTGCTTCAGGGTCCCAGGGTCCTATGGCAAGTTGGAGGCGATGGCTaGAATAACCAGCAGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AWETPPPLLLQGPRVLWQVGGDG*NNQQIG Trigger: ACCAATCTGCTGGTTATTGCAGCCATCGCCTCCAAC...TTGCCATAGGACCCTGGGACCCTGAAGCAATAAGGGAGGGGGTGTTTCCCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTCAGCACATCTAAGGAATCAGCTTCAGTACTAGCACTTGGGAGTCAGGACGGAAGAGGTAGGCCATaGCAGCGAAGAGGTCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSTSKESASVLALGSQDGRGRP*QRRGQP Trigger: CGGCTGACCTCTTCGCTGGCATGGCCTACCTCTTCC...GTCCTGACTCCCAAGTGCTAGTACTGAAGCTGATTCCTTAGATGTGCTGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGGAAGTAATAGAAGCCTTTAAGGTGGGCCCAGAGTGTACAAAAGGTCAGGCCATCACACTGCGGTaGCGTTCCACAGCGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQEVIEAFKVGPECTKGQAITLR*RSTAMA Trigger: GGCCATCGCTGTGGAACGGCACCGCAGTGTGATGGC...CTGACCTTTTGTACACTCTGGGCCCACCTTAAAGGCTTCTATTACTTCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGGGAAAAGCCGGGCACTGACTGTAGAAAGAAAGAGACGTTTTCCGTTCGGAAGACAAGCAGGCTaGATAGGGCCCACGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCGKSRALTVERKRRFPFGRQAG*IGPTQP Trigger: TGGCTGCGTGGGCCCTATCCAGCCTGCTTGTCTTCC...GAACGGAAAACGTCTCTTTCTTTCTACAGTCAGTGCCCGGCTTTTCCCACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | AATCCAGCCCTTCAGTTCGGTCTGCACTGTTTTCCTTTTGGACATGGCTCACGTGGAAGACAAGCAGGCTaGATAGGGCCCACGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPALQFGLHCFPFGHGSRGRQAG*IGPTQP Trigger: TGGCTGCGTGGGCCCTATCCAGCCTGCTTGTCTTCC...ACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAACTGAAGGGCTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CAA 72 bp | TCCAAGCTGTGCAGTCAGACACAGGCTCAATATGGCTaGTCATTCCTAGCACTCAGGGAGCCCAGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKLCSQTQAQYG*SFLALREPRQE Trigger: TTCCTGCCTGGGCTCCCTGAGTGCTAGGAATGACAAGCCATATTGAGCCTGTGTCTGACTGCACAGCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | AATCCAGCCCTTCAGTTCGGTCTGCACTGTTTTCCTTTTGGACATGGCTCACGTCACTGCATTGACCAGTaGGTTGGCCTCAGCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NPALQFGLHCFPFGHGSRHCIDQ*VGLSQE Trigger: CTCCTGGCTGAGGCCAACTCACTGGTCAATGCAGTG...ACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAACTGAAGGGCTGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATGCTCAGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTCATTCTCAGGAAGCATaGTCCGCGTGCTGGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: INAQVYPKTENSHRPFVSHSQEA*SACWHP Trigger: CGGGTGCCAGCACGCGGATCATGCTTCCTGAGAATG...AGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCTGAGCATTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTTGGAGAGCCTGGCAGTaGGTGGGCCAGTATGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HTAEKSRKSQARAMAQYFWRAWQ*VGQYGT Trigger: TGTTCCATACTGGCCCACGCACTGCCAGGCTCTCCA...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | ATCAATGCTCAGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTGTACCGCCATCACACTaGGGTGCCGTTCCACAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: INAQVYPKTENSHRPFVSVPPSH*GAVPQR Trigger: TCGCTGTGGAACGGCACCGCAGTGTGATGGCGGTAC...AGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCTGAGCATTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGATCTGTGCTGGGGAACTTGCCTAGAGTGTGCAAGGTCCTAGCTGTGGGACAAGCAGGTAGTATATaGGCTGGTGGAAGCGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSVLGNLPRVCKVLAVGQAGSI*AGGSVG Trigger: ACCGACGCTTCCACCAGCCCATATACTACCTGCTTG...TCCCACAGCTAGGACCTTGCACACTCTAGGCAAGTTCCCCAGCACAGATCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | CCACAGGAAGTAATAGAAGCCTTTAAGGTGGGCCCAGAGTGTACAAAAGGTCAGGGGCAGACTTGTGGCTaGACCAGCGGAGACACATGC | + |
|
Preference number: 4 (lower is better) Translates to: PQEVIEAFKVGPECTKGQGQTCG*TSGDTC Trigger: GCATGTGTCTCCGCTGGTCCAGCCACAAGTCTGCCC...CTGACCTTTTGTACACTCTGGGCCCACCTTAAAGGCTTCTATTACTTCCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | AATCCAGCCCTTCAGTTCGGTCTGCACTGTTTTCCTTTTGGACATGGCTCACGTGGCCAGTATGGAACATaGGGAAGAGGTAGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NPALQFGLHCFPFGHGSRGQYGT*GRGRPC Trigger: GCATGGCCTACCTCTTCCTCATGTTCCATACTGGCC...ACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAACTGAAGGGCTGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGATCTGTGCTGGGGAACTTGCCTAGAGTGTGCAAGGTCCTAGCTGTGGGATGTAGACAGCTACCATaGGTAGGAAGACAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RRSVLGNLPRVCKVLAVGCRQLP*VGRQAG Trigger: GCCTGCTTGTCTTCCTACTCATGGTAGCTGTCTACA...TCCCACAGCTAGGACCTTGCACACTCTAGGCAAGTTCCCCAGCACAGATCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGAGGGCAGAGACAGGGGATTGCTCAGAACAAGATGCCCAGTGAGACTAGCAATATACCACTGCATTaGCCAGTGAGTTGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGGQRQGIAQNKMPSETSNIPLH*PVSWPQ Trigger: CTGAGGCCAACTCACTGGTCAATGCAGTGGTATATT...GCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAGCCGTTCCACAGCGATaGCCAGCAGTGTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTAVPQR*PAVWPL Trigger: CAGTGGCCACACTGCTGGCCATCGCTGTGGAACGGC...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | AATCCCTCTCTAGAGATACAGAGCCTCCCTGAATGTTTGCTCAGAGACAGAATTGCCGTTCCACAGCGATaGCCAGCAGTGTGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: NPSLEIQSLPECLLRDRIAVPQR*PAVWPL Trigger: CAGTGGCCACACTGCTGGCCATCGCTGTGGAACGGC...AATTCTGTCTCTGAGCAAACATTCAGGGAGGCTCTGTATCTCTAGAGAGGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAGCAATACCAGCACACTaGCTGTCAGCCCCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTAIPAH*LSAPGP Trigger: TGGCCCTGGGGCTGACAGTCAGTGTGCTGGTATTGC...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGGCTGGCATTTTTACCTCTTTGGAGTCTGCTTGGGAAACACCCCCTCCCTTGTAGACAGCTACCATaGGTAGGAAGACAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRLAFLPLWSLLGKHPLPCRQLP*VGRQAG Trigger: GCCTGCTTGTCTTCCTACTCATGGTAGCTGTCTACA...AGGGAGGGGGTGTTTCCCAAGCAGACTCCAAAGAGGTAAAAATGCCAGCCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGGGAAAAGCCGGGCACTGACTGTAGAAAGAAAGAGACGTTTTCCGTTCAAGTCACAGAGGCAGTaGCAGAAGTGTGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCGKSRALTVERKRRFPFKSQRQ*QKCAGS Trigger: GCTACCTGCACACTTCTGGCACTGCCTCTGTGACTT...GAACGGAAAACGTCTCTTTCTTTCTACAGTCAGTGCCCGGCTTTTCCCACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTGTAGGCTGGCATTTTTACCTCTTTGGAGTCTGCTTGGGAAACACCCCAAGTCACAGAGGCAGTaGCAGAAGTGTGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCRLAFLPLWSLLGKHPKSQRQ*QKCAGS Trigger: GCTACCTGCACACTTCTGGCACTGCCTCTGTGACTT...GGGGTGTTTCCCAAGCAGACTCCAAAGAGGTAAAAATGCCAGCCTACAAGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR GCA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCACCAGCGGAGACACATaGAGCAGAGAAGGCGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: STQVQKSVNHKALSFNPSTSGDT*SREGGG Trigger: TCCGCCGCCTTCTCTGCTGCATGTGTCTCCGCTGGT...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CCA 90 bp | ACTGATTACAAGAATGCTAGCCTGCCCTATCCCTTGAGAGACAAAGGCAAAAAGGGAAGACAAGCAGGCTaGATAGGGCCCACGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDYKNASLPYPLRDKGKKGRQAG*IGPTQP Trigger: TGGCTGCGTGGGCCCTATCCAGCCTGCTTGTCTTCC...CTTTTTGCCTTTGTCTCTCAAGGGATAGGGCAGGCTAGCATTCTTGTAATCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| 3UTR CAA 72 bp | AGTATATCTCCTGCCTTGGAGGGCAGAGACAGGGGATaGCTCAGAACAAGATGCCCAGTGAGACTAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SISPALEGRDRG*LRTRCPVRLAV Trigger: TACAGCTAGTCTCACTGGGCATCTTGTTCTGAGCAATCCCCTGTCTCTGCCCTCCAAGGCAGGAGATATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CAA 72 bp | CTTGTAGGCTGGCATTTTTACCTCTTTGGAGTCTGCTaGGGAAACACCCCCTCCCTTATTGCTTCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVGWHFYLFGVC*GNTPSLIASGS Trigger: GGACCCTGAAGCAATAAGGGAGGGGGTGTTTCCCAAGCAGACTCCAAAGAGGTAAAAATGCCAGCCTACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR CCA 90 bp | GGACCTTCCATGCTTACCCCAACTCTGAATAAAGATACAGAGACATGTTTATTTAGGAGCAGCACCACCTaGCCCGGTGTCCAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: GPSMLTPTLNKDTETCLFRSSTT*PGVQHT Trigger: GGTGTGCTGGACACCGGGCCAGGTGGTGCTGCTCCT...AAATAAACATGTCTCTGTATCTTTATTCAGAGTTGGGGTAAGCATGGAAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | ATCAATGCTCAGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTGTTGGAGGCGATGGCTaGAATAACCAGCAGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: INAQVYPKTENSHRPFVSVGGDG*NNQQIG Trigger: ACCAATCTGCTGGTTATTGCAGCCATCGCCTCCAAC...AGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCTGAGCATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR CCA 90 bp | AAGCGCTTGCTACTCAAGTTTGAAGACCAGAATTCAGAACCTCAGAAATCCACAGGTGGAGTCCATCAGTaGGCGGCCATTCTCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KRLLLKFEDQNSEPQKSTGGVHQ*AAILRK Trigger: CTTCCTGAGAATGGCCGCCCACTGATGGACTCCACC...TGTGGATTTCTGAGGTTCTGAATTCTGGTCTTCAAACTTGAGTAGCAAGCGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTCACAGGCCTTTTGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACACACAAAGTCACAGAGGCAGTaGCAGAAGTGTGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TLTGLLSLLFVSPKKGHTKSQRQ*QKCAGS Trigger: GCTACCTGCACACTTCTGGCACTGCCTCTGTGACTT...TGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR TCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATATGTAGACAGCTACCATaGGTAGGAAGACAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKKGHTHTHTHTNPSLEICRQLP*VGRQAG Trigger: GCCTGCTTGTCTTCCTACTCATGGTAGCTGTCTACA...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAAAAGGGACACACACACACACACACACACACAAATCCCTCTCTAGAGATAGTTGGAGGCGATGGCTaGAATAACCAGCAGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKKGHTHTHTHTNPSLEIVGGDG*NNQQIG Trigger: ACCAATCTGCTGGTTATTGCAGCCATCGCCTCCAAC...TATCTCTAGAGAGGGATTTGTGTGTGTGTGTGTGTGTGTGTGTCCCTTTTTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| 3UTR CAA 72 bp | AGGTGTACCCCAAGACAGAGAACTCTCACAGGCCTTTaGTCTCTCTTGTTTGTGAGTCCTAAAAAGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RCTPRQRTLTGL*SLLFVSPKKGH Trigger: GTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGGGGTACACCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR TCA 90 bp | ACTTCTACTAACACATTTATATTATTCCATGTCTGCCTCATGGCTTGTGACCTCGGCCAGTATGGAACATaGGGAAGAGGTAGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTNTFILFHVCLMACDLGQYGT*GRGRPC Trigger: GCATGGCCTACCTCTTCCTCATGTTCCATACTGGCC...GAGGTCACAAGCCATGAGGCAGACATGGAATAATATAAATGTGTTAGTAGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR TCA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCAATATACCACTGCATTaGCCAGTGAGTTGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STQVQKSVNHKALSFNPSNIPLH*PVSWPQ Trigger: CTGAGGCCAACTCACTGGTCAATGCAGTGGTATATT...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR CCA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTTATAGAAAAAGCCGATaGTCTCGTTGTAGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HTAEKSRKSQARAMAQYFYRKSR*SRCSST Trigger: AGTGCTACTACAACGAGACCATCGGCTTTTTCTATA...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| 3UTR CAA 72 bp | CCAAGACAGAGAACTCTCACAGGCCTTTTGTCTCTCTaGTTTGTGAGTCCTAAAAAGGGACACACACACACA | + |
|
Preference number: 4 (lower is better) Translates to: PRQRTLTGLLSL*FVSPKKGHTHT Trigger: TGTGTGTGTGTGTCCCTTTTTAGGACTCACAAACAAGAGAGACAAAAGGCCTGTGAGAGTTCTCTGTCTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR CCA 90 bp | CCACAGGAAGTAATAGAAGCCTTTAAGGTGGGCCCAGAGTGTACAAAAGGTCAGTATAGAAAAAGCCGATaGTCTCGTTGTAGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PQEVIEAFKVGPECTKGQYRKSR*SRCSST Trigger: AGTGCTACTACAACGAGACCATCGGCTTTTTCTATA...CTGACCTTTTGTACACTCTGGGCCCACCTTAAAGGCTTCTATTACTTCCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR CCA 90 bp | GCATTTTTACCTCTTTGGAGTCTGCTTGGGAAACACCCCCTCCCTTATTGCTTCTATAGAAAAAGCCGATaGTCTCGTTGTAGTAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AFLPLWSLLGKHPLPYCFYRKSR*SRCSST Trigger: AGTGCTACTACAACGAGACCATCGGCTTTTTCTATA...GAAGCAATAAGGGAGGGGGTGTTTCCCAAGCAGACTCCAAAGAGGTAAAAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
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| CDS-3UTR GCA 90 bp | CGTTTTCCGTTCTTAAGAAACAGATGCTTTAATGCCTTAAGAATTTGGCCTCAGCCAGCACACCACAAATaGCCCCAGAATGATGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: RFPFLRNRCFNALRIWPQPAHHK*PQNDDN Trigger: GTTGTCATCATTCTGGGGGCATTTGTGGTGTGCTGG...CTGAGGCCAAATTCTTAAGGCATTAAAGCATCTGTTTCTTAAGAACGGAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS GCA 90 bp | CCCCGGGGCAGGCGGCTGTGTAGCTGTACCGCCATCACACTGCGGTaGCGTTCCACAGCGATGGCCAGCAGTGTGGCCACTGACGCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PRGRRLCSCTAITLR*RSTAMASSVATDAV Trigger: CACGGCGTCAGTGGCCACACTGCTGGCCATCGCTGTGGAACGGCACCGCAGTGTGATGGCGGTACAGCTACACAGCCGCCTGCCCCGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS GCA 90 bp | CACGGCCCCGGGGCAGGCGGCTGTGTAGCTGTACCGCCATCACACTaGGGTGCCGTTCCACAGCGATGGCCAGCAGTGTGGCCACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: HGPGAGGCVAVPPSH*GAVPQRWPAVWPLT Trigger: CGTCAGTGGCCACACTGCTGGCCATCGCTGTGGAACGGCACCGCAGTGTGATGGCGGTACAGCTACACAGCCGCCTGCCCCGGGGCCGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS CCA 90 bp | TGGCACCCGTCTGGGCAGAAGCTGAGTAACGGGCAGACTTGTGGCTaGACCAGCGGAGACACATGCAGCAGAGAAGGCGGCGGAAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WHPSGQKLSNGQTCG*TSGDTCSREGGGRC Trigger: GCACCTTCCGCCGCCTTCTCTGCTGCATGTGTCTCCGCTGGTCCAGCCACAAGTCTGCCCGTTACTCAGCTTCTGCCCAGACGGGTGCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS TCA 90 bp | GGCCCACGCAGCCAAGTAGGAGCGGCTGAACAGGGGCACCATGCGTaGGCAACTGTCCAAGTCACAGAGGCAGTGCCAGAAGTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GPRSQVGAAEQGHHA*ATVQVTEAVPEVCR Trigger: CCTGCACACTTCTGGCACTGCCTCTGTGACTTGGACAGTTGCTCACGCATGGTGCCCCTGTTCAGCCGCTCCTACTTGGCTGCGTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
||
| CDS TCA 90 bp | AGACAAGCAGGCTGGATAGGGCCCACGCAGCCAAGTAGGAGCGGCTaGACAGGGGCACCATGCGTGAGCAACTGTCCAAGTCACAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQAGWIGPTQPSRSG*TGAPCVSNCPSHRG Trigger: GCCTCTGTGACTTGGACAGTTGCTCACGCATGGTGCCCCTGTTCAGCCGCTCCTACTTGGCTGCGTGGGCCCTATCCAGCCTGCTTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS TCA 90 bp | CTCAGGAAGCATGATCCGCGTGCTGGCACCCGTCTGGGCAGAAGCTaGGTAACGGGCAGACTTGTGGCTGGACCAGCGGAGACACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRKHDPRAGTRLGRS*VTGRLVAGPAETHA Trigger: TGCATGTGTCTCCGCTGGTCCAGCCACAAGTCTGCCCGTTACTCAGCTTCTGCCCAGACGGGTGCCAGCACGCGGATCATGCTTCCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS GCA 90 bp | AACAGGGGCACCATGCGTGAGCAACTGTCCAAGTCACAGAGGCAGTaGCAGAAGTGTGCAGGTAGCAACCCCAGACCCAGTGCAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: NRGTMREQLSKSQRQ*QKCAGSNPRPSAAA Trigger: GGCGGCTGCACTGGGTCTGGGGTTGCTACCTGCACACTTCTGGCACTGCCTCTGTGACTTGGACAGTTGCTCACGCATGGTGCCCCTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
||
| CDS GCA 90 bp | GGAAGAGGTAGGCCATGCCAGCGAAGAGGTCAGCCGCAGCCAAGTTaGCAAGCAGGTAGTATATGGGCTGGTGGAAGCGTCGGTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGRPCQRRGQPQPS*QAGSIWAGGSVGWR Trigger: CCTCCAACCGACGCTTCCACCAGCCCATATACTACCTGCTTGGCAACTTGGCTGCGGCTGACCTCTTCGCTGGCATGGCCTACCTCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGGGGCAGGGAGTGTTGAAGAGCCATGCATCTGCTGGGCTGGCTTGAGTTGGTGGAAGCGTCGGTaGGAGGCGATGGCTGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: VPGAGSVEEPCICWAGLSWWKRR*EAMAAI Trigger: TATTGCAGCCATCGCCTCCAACCGACGCTTCCACCA...ACTCAAGCCAGCCCAGCAGATGCATGGCTCTTCAACACTCCCTGCCCCAGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS CCA 90 bp | ACGTTGCAGGACTTACAGTCCAGGCCATCCAGGAGCAGCACCACCTaGCCCGGTGTCCAGCACACCACAAATGCCCCCAGAATGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: TLQDLQSRPSRSSTT*PGVQHTTNAPRMMT Trigger: TGTCATCATTCTGGGGGCATTTGTGGTGTGCTGGACACCGGGCCAGGTGGTGCTGCTCCTGGATGGCCTGGACTGTAAGTCCTGCAACGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CAA 90 bp | CACACAGCAGAGAAGTCAAGGAAAAGCCAGGCTAGGGCAATGGCTCAGTACTTTGCATTGACCAGTGAGTaGGCCTCAGCCAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTAEKSRKSQARAMAQYFALTSE*ASARSR Trigger: CCTGCTCCTGGCTGAGGCCAACTCACTGGTCAATGC...AAAGTACTGAGCCATTGCCCTAGCCTGGCTTTTCCTTGACTTCTCTGCTGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS GCA 90 bp | CAGGTAGTATATGGGCTGGTGGAAGCGTCGGTTGGAGGCGATGGCTaGAATAACCAGCAGATTGGTCAGCAATACCAGCACACTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QVVYGLVEASVGGDG*NNQQIGQQYQHTDC Trigger: ACAGTCAGTGTGCTGGTATTGCTGACCAATCTGCTGGTTATTGCAGCCATCGCCTCCAACCGACGCTTCCACCAGCCCATATACTACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
||
| CDS TCA 90 bp | CCCGTCTACGCACATAGAAGAAAATTCGTGTGTAGACAGCTACCATaGGTAGGAAGACAAGCAGGCTGGATAGGGCCCACGCAGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVYAHRRKFVCRQLP*VGRQAGWIGPTQPS Trigger: ACTTGGCTGCGTGGGCCCTATCCAGCCTGCTTGTCTTCCTACTCATGGTAGCTGTCTACACACGAATTTTCTTCTATGTGCGTAGACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTCCAGGACAACCAGGGCCTCAGAGACCTTATCTCACAAAACAAAACAACATGGTGGAAGCGTCGGTaGGAGGCGATGGCTGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: EFQDNQGLRDLISQNKTTWWKRR*EAMAAI Trigger: TATTGCAGCCATCGCCTCCAACCGACGCTTCCACCA...TGTTGTTTTGTTTTGTGAGATAAGGTCTCTGAGGCCCTGGTTGTCCTGGAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238452.2 |
||
| CDS-3UTR CAA 90 bp | AATCCCTCTCTAGAGATACAGAGCCTCCCTGAATGTTTGCTCAGAGACAGAATTGCATTGACCAGTGAGTaGGCCTCAGCCAGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NPSLEIQSLPECLLRDRIALTSE*ASARSR Trigger: CCTGCTCCTGGCTGAGGCCAACTCACTGGTCAATGC...AATTCTGTCTCTGAGCAAACATTCAGGGAGGCTCTGTATCTCTAGAGAGGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CAA 90 bp | TCCACGCAAGTGCAGAAATCTGTAAATCACAAGGCACTTTCCTTTAATCCCAGCTGGTGGAAGCGTCGGTaGGAGGCGATGGCTGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: STQVQKSVNHKALSFNPSWWKRR*EAMAAI Trigger: TATTGCAGCCATCGCCTCCAACCGACGCTTCCACCA...GCTGGGATTAAAGGAAAGTGCCTTGTGATTTACAGATTTCTGCACTTGCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CAA 90 bp | GTAGATGGCAGGAAGGAAGCTAGAATCCAGTACCTTTCTCCACTGGAGAAGTTATCCACAGCCAGAACGTaGCAGGACTTACAGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDGRKEARIQYLSPLEKLSTART*QDLQSR Trigger: CCTGGACTGTAAGTCCTGCAACGTTCTGGCTGTGGA...TAACTTCTCCAGTGGAGAAAGGTACTGGATTCTAGCTTCCTTCCTGCCATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
||
| CDS-3UTR CAA 90 bp | TTCGGTCTGCACTGTTTTCCTTTTGGACATGGCTCACGTGATAGAAGATCTGTGATGATGACAACCGTCTaGACTAGGCTGAGTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: FGLHCFPFGHGSRDRRSVMMTTV*TRLSVV Trigger: GACCACACTCAGCCTAGTCAAGACGGTTGTCATCAT...CACAGATCTTCTATCACGTGAGCCATGTCCAAAAGGAAAACAGTGCAGACCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR CAA 90 bp | TCTAATCCCAACATCTACAATTCGGAGGCAAGACAATGGATTCAAGAACAGCCTTCCACAGCCAGAACGTaGCAGGACTTACAGTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SNPNIYNSEARQWIQEQPSTART*QDLQSR Trigger: CCTGGACTGTAAGTCCTGCAACGTTCTGGCTGTGGA...AGGCTGTTCTTGAATCCATTGTCTTGCCTCCGAATTGTAGATGTTGGGATTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS-3UTR CAA 90 bp | CGTTTTCCGTTCTTAAGAAACAGATGCTTTAATGCCTTAAGAATTTGGCCTCAGATGATGACAACCGTCTaGACTAGGCTGAGTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: RFPFLRNRCFNALRIWPQMMTTV*TRLSVV Trigger: GACCACACTCAGCCTAGTCAAGACGGTTGTCATCAT...CTGAGGCCAAATTCTTAAGGCATTAAAGCATCTGTTTCTTAAGAACGGAAAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS GCA 72 bp | GGGGCAGGCGGCTGTGTAGCTGTACCGCCATCACACTaGGGTGCCGTTCCACAGCGATGGCCAGCAGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: GAGGCVAVPPSH*GAVPQRWPAVW Trigger: CCACACTGCTGGCCATCGCTGTGGAACGGCACCGCAGTGTGATGGCGGTACAGCTACACAGCCGCCTGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS TCA 72 bp | CATGATCCGCGTGCTGGCACCCGTCTGGGCAGAAGCTaGGTAACGGGCAGACTTGTGGCTGGACCAGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: HDPRAGTRLGRS*VTGRLVAGPAE Trigger: CTCCGCTGGTCCAGCCACAAGTCTGCCCGTTACTCAGCTTCTGCCCAGACGGGTGCCAGCACGCGGATCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS GCA 72 bp | AGGCGGCTGTGTAGCTGTACCGCCATCACACTGCGGTaGCGTTCCACAGCGATGGCCAGCAGTGTGGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RRLCSCTAITLR*RSTAMASSVAT Trigger: AGTGGCCACACTGCTGGCCATCGCTGTGGAACGGCACCGCAGTGTGATGGCGGTACAGCTACACAGCCGCCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS GCA 72 bp | AACGGGCAGACTTGTGGCTGGACCAGCGGAGACACATaGAGCAGAGAAGGCGGCGGAAGGTGCGGCGCATCT | + |
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Preference number: 6 (lower is better) Translates to: NGQTCGWTSGDT*SREGGGRCGAS Trigger: AGATGCGCCGCACCTTCCGCCGCCTTCTCTGCTGCATGTGTCTCCGCTGGTCCAGCCACAAGTCTGCCCGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS CAA 72 bp | CTGGTGTCCAGCAGGCCCTGTCGCAGGAACCAGCCTTaGATGGAGAGCCTGGCAGTGCGTGGGCCAGTATGG | + |
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Preference number: 6 (lower is better) Translates to: LVSSRPCRRNQP*MESLAVRGPVW Trigger: CCATACTGGCCCACGCACTGCCAGGCTCTCCATCAAAGGCTGGTTCCTGCGACAGGGCCTGCTGGACACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS TCA 72 bp | GGCTGGATAGGGCCCACGCAGCCAAGTAGGAGCGGCTaGACAGGGGCACCATGCGTGAGCAACTGTCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: GWIGPTQPSRSG*TGAPCVSNCPS Trigger: ACTTGGACAGTTGCTCACGCATGGTGCCCCTGTTCAGCCGCTCCTACTTGGCTGCGTGGGCCCTATCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS TCA 72 bp | TGGAGTCCATCAGTGGGCGGCCATTCTCAGGAAGCATaGTCCGCGTGCTGGCACCCGTCTGGGCAGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: WSPSVGGHSQEA*SACWHPSGQKL Trigger: CAGCTTCTGCCCAGACGGGTGCCAGCACGCGGATCATGCTTCCTGAGAATGGCCGCCCACTGATGGACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS CCA 72 bp | TCTGGGCAGAAGCTGAGTAACGGGCAGACTTGTGGCTaGACCAGCGGAGACACATGCAGCAGAGAAGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SGQKLSNGQTCG*TSGDTCSREGG Trigger: GCCGCCTTCTCTGCTGCATGTGTCTCCGCTGGTCCAGCCACAAGTCTGCCCGTTACTCAGCTTCTGCCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS TCA 72 bp | TGGAGAGCCTGGCAGTGCGTGGGCCAGTATGGAACATaGGGAAGAGGTAGGCCATGCCAGCGAAGAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: WRAWQCVGQYGT*GRGRPCQRRGQ Trigger: CTGACCTCTTCGCTGGCATGGCCTACCTCTTCCTCATGTTCCATACTGGCCCACGCACTGCCAGGCTCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS GCA 72 bp | AGGCCATGCCAGCGAAGAGGTCAGCCGCAGCCAAGTTaGCAAGCAGGTAGTATATGGGCTGGTGGAAGCGTC | + |
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Preference number: 6 (lower is better) Translates to: RPCQRRGQPQPS*QAGSIWAGGSV Trigger: GACGCTTCCACCAGCCCATATACTACCTGCTTGGCAACTTGGCTGCGGCTGACCTCTTCGCTGGCATGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS CAA 90 bp | TGGTGGAAGCGTCGGTTGGAGGCGATGGCTGCAATAACCAGCAGATaGGTCAGCAATACCAGCACACTGACTGTCAGCCCCAGGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: WWKRRLEAMAAITSR*VSNTSTLTVSPRAT Trigger: GGTGGCCCTGGGGCTGACAGTCAGTGTGCTGGTATTGCTGACCAATCTGCTGGTTATTGCAGCCATCGCCTCCAACCGACGCTTCCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS TCA 72 bp | AGCCAAGTAGGAGCGGCTGAACAGGGGCACCATGCGTaGGCAACTGTCCAAGTCACAGAGGCAGTGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SQVGAAEQGHHA*ATVQVTEAVPE Trigger: TTCTGGCACTGCCTCTGTGACTTGGACAGTTGCTCACGCATGGTGCCCCTGTTCAGCCGCTCCTACTTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS GCA 72 bp | ACCATGCGTGAGCAACTGTCCAAGTCACAGAGGCAGTaGCAGAAGTGTGCAGGTAGCAACCCCAGACCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TMREQLSKSQRQ*QKCAGSNPRPS Trigger: ACTGGGTCTGGGGTTGCTACCTGCACACTTCTGGCACTGCCTCTGTGACTTGGACAGTTGCTCACGCATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS CCA 72 bp | CAGGAACCAGCCTTTGATGGAGAGCCTGGCAGTGCGTaGGCCAGTATGGAACATGAGGAAGAGGTAGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QEPAFDGEPGSA*ASMEHEEEVGH Trigger: ATGGCCTACCTCTTCCTCATGTTCCATACTGGCCCACGCACTGCCAGGCTCTCCATCAAAGGCTGGTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS CAA 72 bp | CGTCGGTTGGAGGCGATGGCTGCAATAACCAGCAGATaGGTCAGCAATACCAGCACACTGACTGTCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RRLEAMAAITSR*VSNTSTLTVSP Trigger: GGGGCTGACAGTCAGTGTGCTGGTATTGCTGACCAATCTGCTGGTTATTGCAGCCATCGCCTCCAACCGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS GCA 72 bp | TATGGGCTGGTGGAAGCGTCGGTTGGAGGCGATGGCTaGAATAACCAGCAGATTGGTCAGCAATACCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: YGLVEASVGGDG*NNQQIGQQYQH Trigger: GTGCTGGTATTGCTGACCAATCTGCTGGTTATTGCAGCCATCGCCTCCAACCGACGCTTCCACCAGCCCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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| CDS TCA 72 bp | AGCATCTCGGCAGGAATATACCACTGCATTGACCAGTaGGTTGGCCTCAGCCAGGAGCAGGAAGTACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SISAGIYHCIDQ*VGLSQEQEVLL Trigger: GAGAAGTACTTCCTGCTCCTGGCTGAGGCCAACTCACTGGTCAATGCAGTGGTATATTCCTGCCGAGATGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 |
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| CDS TCA 72 bp | GCACATAGAAGAAAATTCGTGTGTAGACAGCTACCATaGGTAGGAAGACAAGCAGGCTGGATAGGGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: AHRRKFVCRQLP*VGRQAGWIGPT Trigger: CGTGGGCCCTATCCAGCCTGCTTGTCTTCCTACTCATGGTAGCTGTCTACACACGAATTTTCTTCTATGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034325.6 ENSMUST00000164890.8 ENSMUST00000238452.2 |
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