Pregenerated sensors for LOXL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034205Ensembl transcript IDs: ENSMUST00000022660.14, ENSMUST00000100420.4
Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTCGGATGGGATAAGCTGCTCTAAGCTTGTCATCAAGTTTCCATaGCCATGTGCCCGAGCCCTGCCCCTAAGGCCTCAGGACAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: SSDGISCSKLVIKFP*PCARALPLRPQDRD Trigger: GTCCCTGTCCTGAGGCCTTAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTATCCCATCCGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR TCA 90 bp | CCTTACAAGTGTGCAGTCCTGGGTTTGATCCCAGCACTCTGGAGTTaGAAGCGGGAGGGAGGCTCAGAGGTCCAAGGTCATCCTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: PYKCAVLGLIPALWS*KREGGSEVQGHPQL Trigger: GAGCTGAGGATGACCTTGGACCTCTGAGCCTCCCTCCCGCTTTCAACTCCAGAGTGCTGGGATCAAACCCAGGACTGCACACTTGTAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR TCA 90 bp | AAAGGTGAGAGCAAGTTGAGCACCTGCATTCGTCATTCTGCTTCCTaGCTGTGGATGCCACATGACCAGCTGCTCCTGCCGCCATGCTTT | + |
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Preference number: 1 (lower is better) Translates to: KGESKLSTCIRHSAS*LWMPHDQLLLPPCF Trigger: AAAGCATGGCGGCAGGAGCAGCTGGTCATGTGGCATCCACAGTCAGGAAGCAGAATGACGAATGCAGGTGCTCAACTTGCTCTCACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR CCA 90 bp | GGTCAGAAGCATGGTCGTGGAGTTCTTGAGCTTTGGGGGTTGGCTTaGGGGGAGAATCTGGAAGAACTTAGAACTTTGGGTCCAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: GQKHGRGVLELWGLA*GENLEELRTLGPEA Trigger: GGCTTCTGGACCCAAAGTTCTAAGTTCTTCCAGATTCTCCCCCCAAGCCAACCCCCAAAGCTCAAGAACTCCACGACCATGCTTCTGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR TCA 90 bp | CTATCTGTGTTGGGAGTCTCAGCTGGCATAAGCCAGGCTCTGAGGTaGAGAGCCCCTTGCATGTTGTTCCCCCATGACTTTCTCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LSVLGVSAGISQALR*RAPCMLFPHDFLFL Trigger: TAGGAAGAGAAAGTCATGGGGGAACAACATGCAAGGGGCTCTTCACCTCAGAGCCTGGCTTATGCCAGCTGAGACTCCCAACACAGATAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR GCA 90 bp | AGGGAGTCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTAGACCTTCGGAAGAGCAGTCGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: RESDLITDGCEPPCG*WDLNSRPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCTAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGACTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR TCA 90 bp | TCCATGAGCTGGGGTTGTAGGCTGAATATAAAGGTGAGAGCAAGTTaGGCACCTGCATTCGTCATTCTGCTTCCTGACTGTGGATGCCAC | + |
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Preference number: 1 (lower is better) Translates to: SMSWGCRLNIKVRAS*APAFVILLPDCGCH Trigger: GTGGCATCCACAGTCAGGAAGCAGAATGACGAATGCAGGTGCTCAACTTGCTCTCACCTTTATATTCAGCCTACAACCCCAGCTCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR CCA 90 bp | TTTGGGTCCAGAAGCCCTAGAGCGCTTTTAGAGAACAGAACTGAATaGGTTATTGTGGTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: FGSRSPRALLENRTE*VIVVGVWKTRAPSG Trigger: TCCACTTGGCGCTCTGGTCTTCCAAACTCCCACCACAATAACCCATTCAGTTCTGTTCTCTAAAAGCGCTCTAGGGCTTCTGGACCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR GCA 90 bp | ACCCACAGTGACAATGAGCAAGTGGAGCACAGAGACAGAAAAATGTaGGGATCGGTAAGGCAAAGATCACGTACAGGTTTAGAGCAGCAG | + |
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Preference number: 1 (lower is better) Translates to: THSDNEQVEHRDRKM*GSVRQRSRTGLEQQ Trigger: CTGCTGCTCTAAACCTGTACGTGATCTTTGCCTTACCGATCCGCACATTTTTCTGTCTCTGTGCTCCACTTGCTCATTGTCACTGTGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR CCA 90 bp | TCTTCCTATCCTGTCCCAGAACCATCCAAGTCTTCAGCCATCCCTTaGAGCCTTGGGATGTATGCCTTGCTATTGTACTTTAAGTCGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSYPVPEPSKSSAIP*SLGMYALLLYFKSW Trigger: CCACGACTTAAAGTACAATAGCAAGGCATACATCCCAAGGCTCCAAGGGATGGCTGAAGACTTGGATGGTTCTGGGACAGGATAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR CCA 90 bp | CTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTaGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATTACAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: LLKLKLGLMSRVEIL*QSSCLSMSAGITGM Trigger: CATGCCTGTAATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR TCA 90 bp | TTTTTGTCAAGTATAATACAGAAGACTAGAGCTGTCACTGATCACTaGGGTCAGAAGCATGGTCGTGGAGTTCTTGAGCTTTGGGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: FLSSIIQKTRAVTDH*GQKHGRGVLELWGL Trigger: CAACCCCCAAAGCTCAAGAACTCCACGACCATGCTTCTGACCTCAGTGATCAGTGACAGCTCTAGTCTTCTGTATTATACTTGACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR GCA 90 bp | CATCCAAGTCTTCAGCCATCCCTTGGAGCCTTGGGATGTATGCCTTaGTATTGTACTTTAAGTCGTGGCTATAATTGCATGGAATACAGA | + |
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Preference number: 1 (lower is better) Translates to: HPSLQPSLGALGCMP*YCTLSRGYNCMEYR Trigger: TCTGTATTCCATGCAATTATAGCCACGACTTAAAGTACAATAGCAAGGCATACATCCCAAGGCTCCAAGGGATGGCTGAAGACTTGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGAACGTGGAGAGTGGAGGCCTGGGTTTCCATGGCCATGTaGCCGAGCCCTGCCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: VGVWKTRAPSGTWRVEAWVSMAM*PSPAPK Trigger: CTTAGGGGCAGGGCTCGGGCACATGGCCATGGAAAC...CCAGGCCTCCACTCTCCACGTTCCACTTGGCGCTCTGGTCTTCCAAACTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR GCA 90 bp | TTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCCTCTGTGCAGAGCACAGATGTTTCCATGGCCATGTaGCCGAGCCCTGCCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: FMPAVFPEENGPSVQSTDVSMAM*PSPAPK Trigger: CTTAGGGGCAGGGCTCGGGCACATGGCCATGGAAAC...ATCTGTGCTCTGCACAGAGGGGCCGTTTTCTTCTGGGAACACAGCAGGCATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR TCA 90 bp | GAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGCCTCCTGCCTCAGCATaGGTGCAGGGATTACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: EKRSSARSPLQLLSSCLLPPASA*VQGLQA Trigger: TGCCTGTAATCCCTGCACTCATGCTGAGGCAGGAGG...CAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR TCA 90 bp | CCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACCCTCCTGCCTCAGCATaGGTGCAGGGATTACAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PITSAVAEFMPAVFPEENPPASA*VQGLQA Trigger: TGCCTGTAATCCCTGCACTCATGCTGAGGCAGGAGG...GTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR TCA 90 bp | GGGAGGGAGGCTCAGAGGTCCAAGGTCATCCTCAGCTCCATAACTGAGTTTTGGCACCTCTGCAGTTGCTaGGTTCATGCCTGCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: GREAQRSKVILSSITEFWHLCSC*VHACCV Trigger: AACACAGCAGGCATGAACTCAGCAACTGCAGAGGTG...CCAAAACTCAGTTATGGAGCTGAGGATGACCTTGGACCTCTGAGCCTCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR TCA 90 bp | TACCCACTGAGCCATCTCACCAGCCCCAGGACGAGAGTTCTTAAGTGTCTTAATCCAGCACTCTGGAGTTaGAAGCGGGAGGGAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YPLSHLTSPRTRVLKCLNPALWS*KREGGS Trigger: TGAGCCTCCCTCCCGCTTTCAACTCCAGAGTGCTGG...ATTAAGACACTTAAGAACTCTCGTCCTGGGGCTGGTGAGATGGCTCAGTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR CCA 90 bp | TGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCCCCTAAGAGTGGAAATCTTGTaGCAATCCTCCTGCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: CSKLVIKFPWPCARALPLRVEIL*QSSCLS Trigger: GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCT...TAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR CCA 90 bp | CCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGTCATCAAGTTTCCATaGCCATGTGCCCGAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PITSAVAEFMPAVFPEENVIKFP*PCARAL Trigger: CAGGGCTCGGGCACATGGCCATGGAAACTTGATGAC...GTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR TCA 90 bp | GTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGAACGTGGAGAGTGGAGGCCTGGCCAGGAGTCAGTAAGTaGCCATTAAGTCATTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: VGVWKTRAPSGTWRVEAWPGVSK*PLSHFS Trigger: AGAAAAATGACTTAATGGTCACTTACTGACTCCTGG...CCAGGCCTCCACTCTCCACGTTCCACTTGGCGCTCTGGTCTTCCAAACTCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR GCA 90 bp | TCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCGTCACACTTGGGACATaGCAAAGCTCGGATGGGATA | + |
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Preference number: 2 (lower is better) Translates to: SPLQLLSSCLLCSQKKTAVTLGT*QSSDGI Trigger: TATCCCATCCGAGCTTTGGCATGTCCCAAGTGTGAC...GGCCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR CCA 90 bp | TACCCACTGAGCCATCTCACCAGCCCCAGGACGAGAGTTCTTAAGTGTCTTAATGTTGGGAGTCTCAGCTaGCATAAGCCAGGCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: YPLSHLTSPRTRVLKCLNVGSLS*HKPGSE Trigger: CTCAGAGCCTGGCTTATGCCAGCTGAGACTCCCAAC...ATTAAGACACTTAAGAACTCTCGTCCTGGGGCTGGTGAGATGGCTCAGTGGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR TCA 90 bp | GATAGAGAGCATGTTGCCTTACAAGTGTGCAGTCCTGGGTTTGATCCCAGCACTGCAGTGTCTGGGGAGTaGATGAGCACCTTTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: DREHVALQVCSPGFDPSTAVSGE*MSTFLL Trigger: GAGAAGAAAGGTGCTCATTCACTCCCCAGACACTGC...AGTGCTGGGATCAAACCCAGGACTGCACACTTGTAAGGCAACATGCTCTCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR TCA 90 bp | AGGGGTGTCTCCAGAAGAGGTTTAACACAAGAGGGAAGGCCCACCCTAGACACCTTTAGAGAACAGAACTaGATGGGTTATTGTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RGVSRRGLTQEGRPTLDTFREQN*MGYCGG Trigger: CCCACCACAATAACCCATTCAGTTCTGTTCTCTAAA...GGTGTCTAGGGTGGGCCTTCCCTCTTGTGTTAAACCTCTTCTGGAGACACCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR GCA 90 bp | ATCCAGCTGCATCCTGCCTGTGTTCTGAGCACTCGAGTGAGTCTTAACTCAAGAGTCACACTTGGGACATaGCAAAGCTCGGATGGGATA | + |
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Preference number: 2 (lower is better) Translates to: IQLHPACVLSTRVSLNSRVTLGT*QSSDGI Trigger: TATCCCATCCGAGCTTTGGCATGTCCCAAGTGTGAC...TCTTGAGTTAAGACTCACTCGAGTGCTCAGAACACAGGCAGGATGCAGCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGCAGCAGAGAAGGGTAAGTGCTCAGAAAGCAGCTACAACCGATAGAGAGCCTCAGCTCCATAACTaGGTTTTGGAACCAGACACC | + |
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Preference number: 2 (lower is better) Translates to: LEQQRRVSAQKAATTDREPQLHN*VLEPDT Trigger: GGTGTCTGGTTCCAAAACTCAGTTATGGAGCTGAGG...CTCTCTATCGGTTGTAGCTGCTTTCTGAGCACTTACCCTTCTCTGCTGCTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTTGGAACCAGACACCTCACGCTCCTGCTGTCATACTTTCTTTGCCACTACAGTTGCTGAGTTCATaGCTGCTGTGTTCCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: EFWNQTPHAPAVILSLPLQLLSS*LLCSQK Trigger: CTTCTGGGAACACAGCAGGCATGAACTCAGCAACTG...TAGTGGCAAAGAAAGTATGACAGCAGGAGCGTGAGGTGTCTGGTTCCAAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR TCA 90 bp | GAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGCCAGGAGTCAGTAAGTaGCCATTAAGTCATTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: EKRSSARSPLQLLSSCLLPGVSK*PLSHFS Trigger: AGAAAAATGACTTAATGGTCACTTACTGACTCCTGG...CAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR TCA 90 bp | AAGTTACAGGGGTTAAGAGGTGCTCAGGGAAAGAGTAAGACACACCAGAGAGCTTGCGCCCTGATAAGATaGAAACATTGGGCCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: KLQGLRGAQGKSKTHQRACALIR*KHWASI Trigger: TATGCTGGCCCAATGTTTTCATCTTATCAGGGCGCA...AGCTCTCTGGTGTGTCTTACTCTTTCCCTGAGCACCTCTTAACCCCTGTAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR CCA 90 bp | TTAGAGCAGCAGAGAAGGGTAAGTGCTCAGAAAGCAGCTACAACCGATAGAGAGTCCATAACTGAGTTTTaGAACCAGACACCTCACGCT | + |
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Preference number: 2 (lower is better) Translates to: LEQQRRVSAQKAATTDRESITEF*NQTPHA Trigger: AGCGTGAGGTGTCTGGTTCCAAAACTCAGTTATGGA...CTCTCTATCGGTTGTAGCTGCTTTCTGAGCACTTACCCTTCTCTGCTGCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR-3UTR CCA 90 bp | CGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGTTTGAAACTGAAGCTTaGTTTAATGTCCAGAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RSPLQLLSSCLLCSQKKTFETEA*FNVQSG Trigger: TCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA...CGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR-3UTR CCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTTTTGAAACTGAAGCTTaGTTTAATGTCCAGAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: NDLRRGKTEFSPITSAVAFETEA*FNVQSG Trigger: TCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR GCA 72 bp | ATTCTGCTTCCTGACTGTGGATGCCACATGACCAGCTaGTCCTGCCGCCATGCTTTACCCGCTGTGAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: ILLPDCGCHMTS*SCRHALPAVRD Trigger: GTCCCTCACAGCGGGTAAAGCATGGCGGCAGGAGCAGCTGGTCATGTGGCATCCACAGTCAGGAAGCAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR TCA 72 bp | GCCTCAGGACAGGGACACACGGCAGTGTCTGGGGAGTaGATGAGCACCTTTCTTCTCAGCTGGATCTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: ASGQGHTAVSGE*MSTFLLSWIWL Trigger: TAGCCAGATCCAGCTGAGAAGAAAGGTGCTCATTCACTCCCCAGACACTGCCGTGTGTCCCTGTCCTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR TCA 72 bp | AGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCCAGGACGAGAGTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: RPSEEQSGALTH*AISPAPGREFL Trigger: TAAGAACTCTCGTCCTGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR CCA 72 bp | GGGATAAGCTGCTCTAAGCTTGTCATCAAGTTTCCATaGCCATGTGCCCGAGCCCTGCCCCTAAGGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GISCSKLVIKFP*PCARALPLRPQ Trigger: CTGAGGCCTTAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR TCA 72 bp | CCCAGAAGAAAACGGCCCCTCTGTGCAGAGCACAGATaGTGTCACACTTGGGACATGCCAAAGCTCGGATGG | + |
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Preference number: 3 (lower is better) Translates to: PRRKRPLCAEHR*CHTWDMPKLGW Trigger: CCATCCGAGCTTTGGCATGTCCCAAGTGTGACATCATCTGTGCTCTGCACAGAGGGGCCGTTTTCTTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR TCA 72 bp | AGCAAGTTGAGCACCTGCATTCGTCATTCTGCTTCCTaGCTGTGGATGCCACATGACCAGCTGCTCCTGCCG | + |
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Preference number: 3 (lower is better) Translates to: SKLSTCIRHSAS*LWMPHDQLLLP Trigger: CGGCAGGAGCAGCTGGTCATGTGGCATCCACAGTCAGGAAGCAGAATGACGAATGCAGGTGCTCAACTTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR GCA 72 bp | AGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATaGCTGCTGTGTTCCCAGAAGAAAACGGCCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SSARSPLQLLSS*LLCSQKKTAPL Trigger: CAGAGGGGCCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR CCA 72 bp | TATTGTGGTGGGAGTTTGGAAGACCAGAGCGCCAAGTaGAACGTGGAGAGTGGAGGCCTGGTACCTGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: YCGGSLEDQSAK*NVESGGLVPEV Trigger: AACCTCAGGTACCAGGCCTCCACTCTCCACGTTCCACTTGGCGCTCTGGTCTTCCAAACTCCCACCACAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR TCA 72 bp | TTGGGAGTCTCAGCTGGCATAAGCCAGGCTCTGAGGTaGAGAGCCCCTTGCATGTTGTTCCCCCATGACTTT | + |
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Preference number: 3 (lower is better) Translates to: LGVSAGISQALR*RAPCMLFPHDF Trigger: AAAGTCATGGGGGAACAACATGCAAGGGGCTCTTCACCTCAGAGCCTGGCTTATGCCAGCTGAGACTCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTAGACCTTCGGAAGAGCAGTCGGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: QMVVSHHVVAGI*TLDLRKSSRVL Trigger: GAGCACCCGACTGCTCTTCCGAAGGTCTAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR TCA 72 bp | AAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTaGGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGG | + |
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Preference number: 3 (lower is better) Translates to: KNGVQPDHLCSC*VHACCVPRRKR Trigger: CCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| 3UTR TCA 72 bp | TCTGAGGTGAAGAGCCCCTTGCATGTTGTTCCCCCATaGCTTTCTCTTCCTATCCTGTCCCAGAACCATCCA | + |
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Preference number: 3 (lower is better) Translates to: SEVKSPLHVVPP*LSLPILSQNHP Trigger: TGGATGGTTCTGGGACAGGATAGGAAGAGAAAGTCATGGGGGAACAACATGCAAGGGGCTCTTCACCTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
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| 3UTR GCA 72 bp | TCTGTGCAGAGCACAGATGATGTCACACTTGGGACATaGCAAAGCTCGGATGGGATAAGCTGCTCTAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVQSTDDVTLGT*QSSDGISCSKL Trigger: AAGCTTAGAGCAGCTTATCCCATCCGAGCTTTGGCATGTCCCAAGTGTGACATCATCTGTGCTCTGCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| 3UTR CCA 72 bp | AGGTCCAAGGTCATCCTCAGCTCCATAACTGAGTTTTaGAACCAGACACCTCACGCTCCTGCTGTCATACTT | + |
|
Preference number: 3 (lower is better) Translates to: RSKVILSSITEF*NQTPHAPAVIL Trigger: AAGTATGACAGCAGGAGCGTGAGGTGTCTGGTTCCAAAACTCAGTTATGGAGCTGAGGATGACCTTGGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR CCA 72 bp | CCTGTCCCAGAACCATCCAAGTCTTCAGCCATCCCTTaGAGCCTTGGGATGTATGCCTTGCTATTGTACTTT | + |
|
Preference number: 3 (lower is better) Translates to: PVPEPSKSSAIP*SLGMYALLLYF Trigger: AAAGTACAATAGCAAGGCATACATCCCAAGGCTCCAAGGGATGGCTGAAGACTTGGATGGTTCTGGGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR CCA 72 bp | CTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTAGACCTTCGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LITDGCEPPCGC*DLNSRPSEEQS Trigger: CGACTGCTCTTCCGAAGGTCTAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR GCA 72 bp | ACACTTGGGACATGCCAAAGCTCGGATGGGATAAGCTaGTCTAAGCTTGTCATCAAGTTTCCATGGCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TLGTCQSSDGIS*SKLVIKFPWPC Trigger: ACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTATCCCATCCGAGCTTTGGCATGTCCCAAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| 3UTR GCA 72 bp | GATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTAGACCTTCGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLITDGCEPPCG*WDLNSRPSEEQ Trigger: CTGCTCTTCCGAAGGTCTAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR CCA 72 bp | CTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTaGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: LKLGLMSRVEIL*QSSCLSMSAGI Trigger: AATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGTGTCTCCAGAAGAGGTTTAACACAAGAGGGAAGGCCCACCCTAGACACCAATGGACACATTTGCTaGGCAGAGAACATTTTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RGVSRRGLTQEGRPTLDTNGHIC*AENILR Trigger: TCTTAAAATGTTCTCTGCCAAGCAAATGTGTCCATT...GGTGTCTAGGGTGGGCCTTCCCTCTTGTGTTAAACCTCTTCTGGAGACACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR TCA 72 bp | TGGGGTTGTAGGCTGAATATAAAGGTGAGAGCAAGTTaGGCACCTGCATTCGTCATTCTGCTTCCTGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: WGCRLNIKVRAS*APAFVILLPDC Trigger: ACAGTCAGGAAGCAGAATGACGAATGCAGGTGCTCAACTTGCTCTCACCTTTATATTCAGCCTACAACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR GCA 72 bp | GACAATGAGCAAGTGGAGCACAGAGACAGAAAAATGTaGGGATCGGTAAGGCAAAGATCACGTACAGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: DNEQVEHRDRKM*GSVRQRSRTGL Trigger: TAAACCTGTACGTGATCTTTGCCTTACCGATCCGCACATTTTTCTGTCTCTGTGCTCCACTTGCTCATTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR GCA 72 bp | AACATTTTAAGACAGGGTAGCATTCAGGCTGTGCTATaGATTTCTGGTCACTGCTCTTACTCAGACCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: NILRQGSIQAVL*ISGHCSYSDPQ Trigger: CTGTGGGTCTGAGTAAGAGCAGTGACCAGAAATGCATAGCACAGCCTGAATGCTACCCTGTCTTAAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR GCA 72 bp | CTTCAGCCATCCCTTGGAGCCTTGGGATGTATGCCTTaGTATTGTACTTTAAGTCGTGGCTATAATTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LQPSLGALGCMP*YCTLSRGYNCM Trigger: CATGCAATTATAGCCACGACTTAAAGTACAATAGCAAGGCATACATCCCAAGGCTCCAAGGGATGGCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR TCA 72 bp | AGTATAATACAGAAGACTAGAGCTGTCACTGATCACTaGGGTCAGAAGCATGGTCGTGGAGTTCTTGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SIIQKTRAVTDH*GQKHGRGVLEL Trigger: AAGCTCAAGAACTCCACGACCATGCTTCTGACCTCAGTGATCAGTGACAGCTCTAGTCTTCTGTATTATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR GCA 72 bp | ATGCCTTGCTATTGTACTTTAAGTCGTGGCTATAATTaGATGGAATACAGACGTGGGTTTAACTGCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: MPCYCTLSRGYN*MEYRRGFNCKR Trigger: CCTCTTGCAGTTAAACCCACGTCTGTATTCCATGCAATTATAGCCACGACTTAAAGTACAATAGCAAGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCGGCGCCGGTGGCCTCTaGTGGGGTCGGTGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TEFSPITSAVAEFMPAVFGAGGL*WGRCAQ Trigger: CTGTGCACACCGACCCCACCAGAGGCCACCGGCGCC...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGAACGTGGAGAGTGGAGGCCTGGGGCTTTCCGGAACCTTaGGGGTCCATCGGGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGVWKTRAPSGTWRVEAWGFPEP*GSIGAE Trigger: TTCAGCCCCGATGGACCCTCAAGGTTCCGGAAAGCC...CCAGGCCTCCACTCTCCACGTTCCACTTGGCGCTCTGGTCTTCCAAACTCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGGGCGCCGGTGGCCTCTaGTGGGGTCGGTGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MSRVEILWQSSCLSMSAGGAGGL*WGRCAQ Trigger: CTGTGCACACCGACCCCACCAGAGGCCACCGGCGCC...CCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | GTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGAACGTGGAGAGTGGAGGCCTGGTGTGCTTGCAGTCAGTaGCACCCCAGCCATTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGVWKTRAPSGTWRVEAWCACSQ*HPSHWR Trigger: CCTCCAATGGCTGGGGTGTCACTGACTGCAAGCACA...CCAGGCCTCCACTCTCCACGTTCCACTTGGCGCTCTGGTCTTCCAAACTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR GCA 90 bp | CCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACCTGGTGGGGTCGGTGTaGACAGCGGAGGCGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PITSAVAEFMPAVFPEENLVGSV*TAEAER Trigger: CCTCTCCGCCTCCGCTGTGCACACCGACCCCACCAG...GTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | GCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAACTGACCACAGCTGGCTaGCCGTTCTCACAGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ARSPLQLLSSCLLCSQKKLTTAG*PFSQVA Trigger: CGCCACCTGTGAGAACGGGCAGCCAGCTGTGGTCAG...TTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGGCTCAGAGGTCCAAGGTCATCCTCAGCTCCATAACTGAGTTTTGGGCCGGCAGACCACCATaGCTTCCACAATGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GREAQRSKVILSSITEFWAGRPP*LPQCPS Trigger: ACTGGGGCATTGTGGAAGCCATGGTGGTCTGCCGGC...CCAAAACTCAGTTATGGAGCTGAGGATGACCTTGGACCTCTGAGCCTCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | TGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCCCCTAGCCGGCAGACCACCATaGCTTCCACAATGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSKLVIKFPWPCARALPLAGRPP*LPQCPS Trigger: ACTGGGGCATTGTGGAAGCCATGGTGGTCTGCCGGC...TAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | GCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAGCCACCTCCTCGTCATaGCGGCAGTGTGCTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSPLQLLSSCLLCSQKKATSSS*RQCARD Trigger: GTCCCTAGCACACTGCCGCCATGACGAGGAGGTGGC...TTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | CTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCCCCTAAGGCCTCAGGGCAGTTCTCCTCCATaGCACACTGCAGCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LVIKFPWPCARALPLRPQGSSPP*HTAART Trigger: TGTCCTTGCTGCAGTGTGCCATGGAGGAGAACTGCC...CTGAGGCCTTAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | ATAAGCTGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCTGACCACAGCTGGCTaGCCGTTCTCACAGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISCSKLVIKFPWPCARALLTTAG*PFSQVA Trigger: CGCCACCTGTGAGAACGGGCAGCCAGCTGTGGTCAG...CAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCGGCCCAGCTTGCAGCTaGAGATATGCGCTTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEFSPITSAVAEFMPAVFGPACS*RYALQC Trigger: GCACTGAAGCGCATATCTCCAGCTGCAAGCTGGGCC...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCGGACAGCTCCGTTCCTaGGCACTTCACTCCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEFSPITSAVAEFMPAVFGQLRS*ALHSTH Trigger: ATGAGTGGAGTGAAGTGCTCAGGAACGGAGCTGTCC...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | AGGGGTGTCTCCAGAAGAGGTTTAACACAAGAGGGAAGGCCCACCCTAGACACCCCCAGCAGCCCATGGTaGTGCCTTGTTCTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGVSRRGLTQEGRPTLDTPSSPW*CLVLQS Trigger: ACTTTGGAGAACAAGGCATCACCATGGGCTGCTGGG...GGTGTCTAGGGTGGGCCTTCCCTCTTGTGTTAAACCTCTTCTGGAGACACCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR GCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTACGCGGCCCTCATTGTaGTTCCTCTTCTGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NDLRRGKTEFSPITSAVATRPSL*FLFWPA Trigger: GGCGGGCCAGAAGAGGAAGCACAATGAGGGCCGCGT...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | TTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCCTCTGTGCAGAGCACAGATCGGAAGGGCCCAGCTTaGAGCTGGAGATATGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FMPAVFPEENGPSVQSTDRKGPA*SWRYAL Trigger: AAGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCG...ATCTGTGCTCTGCACAGAGGGGCCGTTTTCTTCTGGGAACACAGCAGGCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | GCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAAAGCACCAGGTCAGGTaGAGTTTCCGAGCAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSPLQLLSSCLLCSQKKKHQVR*SFRAGD Trigger: GTCGCCTGCTCGGAAACTGCACCTGACCTGGTGCTT...TTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | GAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTCCTCCATGGCACACTaGAGCAAGGACATGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EKRSSARSPLQLLSSCLLSSMAH*SKDMGL Trigger: CAGGCCCATGTCCTTGCTGCAGTGTGCCATGGAGGA...CAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | ACAGAACTGAATGGGTTATTGTGGTGGGAGTTTGGAAGACCAGAGCGCCAAGTGTTGTGCTTCCTCTTCTaGCCCGCCAGGCGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TELNGLLWWEFGRPERQVLCFLF*PARRTW Trigger: CCAGGTCCGCCTGGCGGGCCAGAAGAGGAAGCACAA...CACTTGGCGCTCTGGTCTTCCAAACTCCCACCACAATAACCCATTCAGTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCACAACTGACCACAGCTaGCTGCCCGTTCTCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TEFSPITSAVAEFMPAVFTTDHS*LPVLTG Trigger: ACCTGTGAGAACGGGCAGCCAGCTGTGGTCAGTTGT...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | TCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCTCGGCAGACCACACTaGCAGATACCAGGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SPLQLLSSCLLCSQKKTALGRPH*QIPGPT Trigger: AGTGGGACCTGGTATCTGCCAGTGTGGTCTGCCGAG...GGCCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AGGGGTGTCTCCAGAAGAGGTTTAACACAAGAGGGAAGGCCCACCCTAGACACCCCTGAAAGGCATTGCTaGCAAAGCCCAGGCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGVSRRGLTQEGRPTLDTPERHC*QSPGLA Trigger: AGCTAGGCCTGGGCTTTGCCAGCAATGCCTTTCAGG...GGTGTCTAGGGTGGGCCTTCCCTCTTGTGTTAAACCTCTTCTGGAGACACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGCCACCTCCTCGTCATaGCGGCAGTGTGCTAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NDLRRGKTEFSPITSAVAATSSS*RQCARD Trigger: GTCCCTAGCACACTGCCGCCATGACGAGGAGGTGGC...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | GCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACTGCAGCAAGGACATaGGCCTGTCCTCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSPLQLLSSCLLCSQKKTAART*ACPPGR Trigger: CCTACCTGGAGGACAGGCCCATGTCCTTGCTGCAGT...TTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTGCAGAGCACAGATGATGTCACACTTGGGACATGCCAAAGCTCGGATGACTGCAGCAAGGACATaGGCCTGTCCTCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCRAQMMSHLGHAKARMTAART*ACPPGR Trigger: CCTACCTGGAGGACAGGCCCATGTCCTTGCTGCAGT...CATCCGAGCTTTGGCATGTCCCAAGTGTGACATCATCTGTGCTCTGCACAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | CTGCATCCTGCCTGTGTTCTGAGCACTCGAGTGAGTCTTAACTCAAGAGTAATGCGTAAAAGGCGCCGGTaGCCTCTGGTGGGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHPACVLSTRVSLNSRVMRKRRR*PLVGSV Trigger: CACCGACCCCACCAGAGGCCACCGGCGCCTTTTACG...CATTACTCTTGAGTTAAGACTCACTCGAGTGCTCAGAACACAGGCAGGATGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCCGTAAAAGGCGCCGGTaGCCTCTGGTGGGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLGLMSRVEILWQSSCLSRKRRR*PLVGSV Trigger: CACCGACCCCACCAGAGGCCACCGGCGCCTTTTACG...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AGGGGTGTCTCCAGAAGAGGTTTAACACAAGAGGGAAGGCCCACCCTAGACACCGGGCGGAAGTCAGACTaGCCATTGTTGTGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGVSRRGLTQEGRPTLDTGRKSD*PLLWIW Trigger: CCAGATCCACAACAATGGCCAGTCTGACTTCCGCCC...GGTGTCTAGGGTGGGCCTTCCCTCTTGTGTTAAACCTCTTCTGGAGACACCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR TCA 90 bp | TCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCCCAGCAGCCCATGGTaGTGCCTTGTTCTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLQLLSSCLLCSQKKTAPSSPW*CLVLQS Trigger: ACTTTGGAGAACAAGGCATCACCATGGGCTGCTGGG...GGCCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTCTGCTTCCAAGCCTTaGCCTCCTTCACCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KTEFSPITSAVAEFMPAVSASKP*PPSPPR Trigger: ACGTGGAGGTGAAGGAGGGCAAGGCTTGGAAGCAGA...CACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | ATAAGCTGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCGGAAGGGCCCAGCTTaGAGCTGGAGATATGCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISCSKLVIKFPWPCARALRKGPA*SWRYAL Trigger: AAGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCG...CAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | CCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACTCAGGAGCGGGCTGCTaGAAGTACTCAGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PITSAVAEFMPAVFPEENSGAGC*KYSGYW Trigger: CCAGTACCCTGAGTACTTCCAGCAGCCCGCTCCTGA...GTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | GATAGAGAGCATGTTGCCTTACAAGTGTGCAGTCCTGGGTTTGATCCCAGCACTTGCCGGCAGACCACATaGGCGGCATGGATCGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DREHVALQVCSPGFDPSTCRQTT*AAWIEK Trigger: CTTCTCGATCCATGCCGCCCATGTGGTCTGCCGGCA...AGTGCTGGGATCAAACCCAGGACTGCACACTTGTAAGGCAACATGCTCTCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCGTCACAGGCTTGCGATaGCGAAAGGCAGAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TEFSPITSAVAEFMPAVFVTGLR*RKAERM Trigger: CATCCTTTCTGCCTTTCGCCATCGCAAGCCTGTGAC...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTGTGCAGAGCACAGATGATGTCACACTTGGGACATGCCAAAGCTCGGATGTCGGGGCTGAAGATCTaGCTAGGCACACAACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: PLCRAQMMSHLGHAKARMSGLKI*LGTQLT Trigger: GGTCAGTTGTGTGCCTAGCCAGATCTTCAGCCCCGA...CATCCGAGCTTTGGCATGTCCCAAGTGTGACATCATCTGTGCTCTGCACAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | AGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATTACATGTGCTTGCAGTCAGTaGCACCCCAGCCATTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVEILWQSSCLSMSAGITCACSQ*HPSHWR Trigger: CCTCCAATGGCTGGGGTGTCACTGACTGCAAGCACA...TGTAATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | GCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAACAGTACCAGGTCTCCTaGAAGGCATTGCTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSPLQLLSSCLLCSQKKQYQVS*KALLAK Trigger: CTTTGCCAGCAATGCCTTTCAGGAGACCTGGTACTG...TTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTTGCTCAGGAGCGGGCTaGTGGAAGTACTCAGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NDLRRGKTEFSPITSAVACSGAG*WKYSGY Trigger: GTACCCTGAGTACTTCCAGCAGCCCGCTCCTGAGCA...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | CCTCTGTGCAGAGCACAGATGATGTCACACTTGGGACATGCCAAAGCTCGGATGCCTCTGTCACAGGCTTaGGATGGCGAAAGGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLCRAQMMSHLGHAKARMPLSQA*DGERQK Trigger: TTTCTGCCTTTCGCCATCGCAAGCCTGTGACAGAGG...CATCCGAGCTTTGGCATGTCCCAAGTGTGACATCATCTGTGCTCTGCACAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | CGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGTTGCAGCTGGAGATATaGGCTTCAGTGCCCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLQLLSSCLLCSQKKTLQLEI*ASVPVQ Trigger: CTGCACGGGCACTGAAGCGCATATCTCCAGCTGCAA...CGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTATGGGCCCAATCCCTTaGCCTAGTCTGGAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NDLRRGKTEFSPITSAVAMGPIP*PSLEPV Trigger: CACAGGCTCCAGACTAGGGCAAGGGATTGGGCCCAT...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATTACAATGGGCCCAATCCCTTaGCCTAGTCTGGAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVEILWQSSCLSMSAGITMGPIP*PSLEPV Trigger: CACAGGCTCCAGACTAGGGCAAGGGATTGGGCCCAT...TGTAATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AGGGGTGTCTCCAGAAGAGGTTTAACACAAGAGGGAAGGCCCACCCTAGACACCAGTTGTACATCCAGATaGGGTAGCCATCATAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGVSRRGLTQEGRPTLDTSCTSR*GSHHSG Trigger: GCCGCTATGATGGCTACCGCATCTGGATGTACAACT...GGTGTCTAGGGTGGGCCTTCCCTCTTGTGTTAAACCTCTTCTGGAGACACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTTCAGGAGCGGGCTGCTaGAAGTACTCAGGGTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NDLRRGKTEFSPITSAVASGAGC*KYSGYW Trigger: CCAGTACCCTGAGTACTTCCAGCAGCCCGCTCCTGA...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGGTCACAGGCTTGCGATaGCGAAAGGCAGAAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KTEFSPITSAVAEFMPAVVTGLR*RKAERM Trigger: CATCCTTTCTGCCTTTCGCCATCGCAAGCCTGTGAC...CACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGATGCCACAGACCACGTaGGAATTCTTGGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTEFSPITSAVAEFMPAVMPQTT*EFLAVQ Trigger: CTGGACAGCCAAGAATTCCCACGTGGTCTGTGGCAT...CACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATGCCACAGACCACGTaGGAATTCTTGGCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSRVEILWQSSCLSMSAGMPQTT*EFLAVQ Trigger: CTGGACAGCCAAGAATTCCCACGTGGTCTGTGGCAT...CCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | ACAGAACTGAATGGGTTATTGTGGTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGGCCCAGCTTGCAGCTaGAGATATGCGCTTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TELNGLLWWEFGRPERQVGPACS*RYALQC Trigger: GCACTGAAGCGCATATCTCCAGCTGCAAGCTGGGCC...CACTTGGCGCTCTGGTCTTCCAAACTCCCACCACAATAACCCATTCAGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | CTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCCCCTAAGGCCTCAGACTTGTCATCGCAGATaGTTCCCCATTCTCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVIKFPWPCARALPLRPQTCHRR*FPILHS Trigger: AGAATGGAGAATGGGGAACCATCTGCGATGACAAGT...CTGAGGCCTTAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATTACACTCGGCAGACCACACTaGCAGATACCAGGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RVEILWQSSCLSMSAGITLGRPH*QIPGPT Trigger: AGTGGGACCTGGTATCTGCCAGTGTGGTCTGCCGAG...TGTAATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | CACCCTGGCAAGAATCCAGCTGCATCCTGCCTGTGTTCTGAGCACTCGAGTGAGCCATTGTTGTGGATCTaGGAGGAGAAGCGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPGKNPAASCLCSEHSSEPLLWI*EEKRKR Trigger: CCTTTTACGCTTCTCCTCCCAGATCCACAACAATGG...CTCACTCGAGTGCTCAGAACACAGGCAGGATGCAGCTGGATTCTTGCCAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | ATAAGCTGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGGGGCGGAAGTCAGACTaGCCATTGTTGTGGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCSKLVIKFPWPCARALGRKSD*PLLWIW Trigger: CCAGATCCACAACAATGGCCAGTCTGACTTCCGCCC...CAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTAGACCTTCGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSRPSEEQSGA Trigger: AGCACCCGACTGCTCTTCCGAAGGTCTAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR TCA 90 bp | TTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCCTCTGTGCAGAGCACAGATACTTCACTCCACTCATaGCCACGTTGTTGGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FMPAVFPEENGPSVQSTDTSLHS*PRCWRR Trigger: TCTTCGCCAACAACGTGGTCATGAGTGGAGTGAAGT...ATCTGTGCTCTGCACAGAGGGGCCGTTTTCTTCTGGGAACACAGCAGGCATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCTGCTCAGGAGCGGGCTaGTGGAAGTACTCAGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLGLMSRVEILWQSSCLSCSGAG*WKYSGY Trigger: GTACCCTGAGTACTTCCAGCAGCCCGCTCCTGAGCA...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATTACATTGCAGCTGGAGATATaGGCTTCAGTGCCCGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVEILWQSSCLSMSAGITLQLEI*ASVPVQ Trigger: CTGCACGGGCACTGAAGCGCATATCTCCAGCTGCAA...TGTAATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | CTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCCTGGTGGGGTCGGTGTaGACAGCGGAGGCGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKLKLGLMSRVEILWQSLVGSV*TAEAER Trigger: CCTCTCCGCCTCCGCTGTGCACACCGACCCCACCAG...GGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| CDS-3UTR CCA 90 bp | AAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCTTGTGCTTCCTCTTCTaGCCCGCCAGGCGGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKLGLMSRVEILWQSSCLCFLF*PARRTW Trigger: CCAGGTCCGCCTGGCGGGCCAGAAGAGGAAGCACAA...GCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| CDS-3UTR CCA 90 bp | AAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGCCACGTGGGAATTCTTaGCTGTCCAGTGTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KTEFSPITSAVAEFMPAVPRGNS*LSSVCC Trigger: GCAACAAACACTGGACAGCCAAGAATTCCCACGTGG...CACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTCAGTACCAGGTCTCCTaGAAGGCATTGCTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NDLRRGKTEFSPITSAVAQYQVS*KALLAK Trigger: CTTTGCCAGCAATGCCTTTCAGGAGACCTGGTACTG...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | TTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCCTCTGTGCAGAGCACAGATGCAGGTCATAGTAAGTaGAGACTTCCATGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMPAVFPEENGPSVQSTDAGHSK*RLPCCG Trigger: ACCACAGCATGGAAGTCTTCACTTACTATGACCTGC...ATCTGTGCTCTGCACAGAGGGGCCGTTTTCTTCTGGGAACACAGCAGGCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | CGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGAAGGCTCCACCTACGTaGCAGTTGTACATCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLQLLSSCLLCSQKKTKAPPT*QLYIQM Trigger: CATCTGGATGTACAACTGTCACGTAGGTGGAGCCTT...CGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCTCTGCTTCCAAGCCTTaGCCTCCTTCACCTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGLMSRVEILWQSSCLSSASKP*PPSPPR Trigger: ACGTGGAGGTGAAGGAGGGCAAGGCTTGGAAGCAGA...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | GAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGCTGTCCAGTGTTTGTTaGAGATCTGCTTCCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: EKRSSARSPLQLLSSCLLLSSVC*RSASKP Trigger: AGGCTTGGAAGCAGATCTGCAACAAACACTGGACAG...CAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | TCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCTGTCCAGTGTTTGTTaGAGATCTGCTTCCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPLQLLSSCLLCSQKKTALSSVC*RSASKP Trigger: AGGCTTGGAAGCAGATCTGCAACAAACACTGGACAG...GGCCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | CCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACAGTTGTACATCCAGATaGGGTAGCCATCATAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PITSAVAEFMPAVFPEENSCTSR*GSHHSG Trigger: GCCGCTATGATGGCTACCGCATCTGGATGTACAACT...GTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | GAGTTTTGGAACCAGACACCTCACGCTCCTGCTGTCATACTTTCTTTGCCACTAACAACTGACCACAGCTaGCTGCCCGTTCTCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EFWNQTPHAPAVILSLPLTTDHS*LPVLTG Trigger: ACCTGTGAGAACGGGCAGCCAGCTGTGGTCAGTTGT...TAGTGGCAAAGAAAGTATGACAGCAGGAGCGTGAGGTGTCTGGTTCCAAAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATTACACACCAAGGGTTGCTCTaGCTTGTAGGCTTTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVEILWQSSCLSMSAGITHQGLL*LVGFPE Trigger: TTCCGGAAAGCCTACAAGCCAGAGCAACCCTTGGTG...TGTAATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCCCTGAAAGGCATTGCTaGCAAAGCCCAGGCCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLGLMSRVEILWQSSCLSPERHC*QSPGLA Trigger: AGCTAGGCCTGGGCTTTGCCAGCAATGCCTTTCAGG...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | ATCCAGCTGCATCCTGCCTGTGTTCTGAGCACTCGAGTGAGTCTTAACTCAAGAACTTCACTCCACTCATaGCCACGTTGTTGGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQLHPACVLSTRVSLNSRTSLHS*PRCWRR Trigger: TCTTCGCCAACAACGTGGTCATGAGTGGAGTGAAGT...TCTTGAGTTAAGACTCACTCGAGTGCTCAGAACACAGGCAGGATGCAGCTGGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR TCA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTAAGGCTCCACCTACGTaGCAGTTGTACATCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NDLRRGKTEFSPITSAVAKAPPT*QLYIQM Trigger: CATCTGGATGTACAACTGTCACGTAGGTGGAGCCTT...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | CTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCACGCGGCCCTCATTGTaGTTCCTCTTCTGGCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKLKLGLMSRVEILWQSTRPSL*FLFWPA Trigger: GGCGGGCCAGAAGAGGAAGCACAATGAGGGCCGCGT...GGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCCCAACGTCTTCAGTGTaGTTGCAGTCAGTGACACCC | + |
|
Preference number: 4 (lower is better) Translates to: KLGLMSRVEILWQSSCLSPTSSV*LQSVTP Trigger: GGGTGTCACTGACTGCAAGCACACTGAAGACGTTGG...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | ATCCAGCTGCATCCTGCCTGTGTTCTGAGCACTCGAGTGAGTCTTAACTCAAGACCACGTGGGAATTCTTaGCTGTCCAGTGTTTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQLHPACVLSTRVSLNSRPRGNS*LSSVCC Trigger: GCAACAAACACTGGACAGCCAAGAATTCCCACGTGG...TCTTGAGTTAAGACTCACTCGAGTGCTCAGAACACAGGCAGGATGCAGCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCAGGTTTTATAGGCTTTaGGGTTGTAGGTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TEFSPITSAVAEFMPAVFRFYRL*GCRSSL Trigger: CAGAGAAGACCTACAACCCCAAAGCCTATAAAACCT...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | CGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGCCATTGTTGTGGATCTaGGAGGAGAAGCGTAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPLQLLSSCLLCSQKKTPLLWI*EEKRKR Trigger: CCTTTTACGCTTCTCCTCCCAGATCCACAACAATGG...CGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| 3UTR CAA 72 bp | AACCAGACACCTCACGCTCCTGCTGTCATACTTTCTTaGCCACTACAGATTGGTTCCTCAAACCACGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQTPHAPAVILS*PLQIGSSNHEL Trigger: GAGCTCGTGGTTTGAGGAACCAATCTGTAGTGGCAAAGAAAGTATGACAGCAGGAGCGTGAGGTGTCTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR CAA 72 bp | GTGCTCAGAAAGCAGCTACAACCGATAGAGAGCATGTaGCCTTACAAGTGTGCAGTCCTGGGTTTGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRKQLQPIESM*PYKCAVLGLIP Trigger: TGGGATCAAACCCAGGACTGCACACTTGTAAGGCAACATGCTCTCTATCGGTTGTAGCTGCTTTCTGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| 3UTR CAA 72 bp | GACCCTATATTAGCACCATTCACAATGCTATCTGTGTaGGGAGTCTCAGCTGGCATAAGCCAGGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPILAPFTMLSV*GVSAGISQALR Trigger: CCTCAGAGCCTGGCTTATGCCAGCTGAGACTCCCAACACAGATAGCATTGTGAATGGTGCTAATATAGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR TCA 90 bp | ATAAGCTGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGTCATGGTTGCAGCCTTaGGACTCTGTGTTGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISCSKLVIKFPWPCARALSWLQP*DSVLNL Trigger: CAAATTCAACACAGAGTCTCAAGGCTGCAACCATGA...CAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | ACAGAACTGAATGGGTTATTGTGGTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGCAGGTCATAGTAAGTaGAGACTTCCATGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TELNGLLWWEFGRPERQVAGHSK*RLPCCG Trigger: ACCACAGCATGGAAGTCTTCACTTACTATGACCTGC...CACTTGGCGCTCTGGTCTTCCAAACTCCCACCACAATAACCCATTCAGTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCTGTTTGTTGCAGATCTaGTTCCAAGCCTTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLGLMSRVEILWQSSCLSCLLQI*FQALPS Trigger: GGAGGGCAAGGCTTGGAAGCAGATCTGCAACAAACA...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCGGCAGTTCTCCTCCATaGCACACTGCAGCAAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KLKLGLMSRVEILWQSSCGSSPP*HTAART Trigger: TGTCCTTGCTGCAGTGTGCCATGGAGGAGAACTGCC...GCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| 3UTR CAA 72 bp | AAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTaGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLKLGLMSRVEI*WQSSCLSMSAG Trigger: CCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | GATTGGTTCCTCAAACCACGAGCTCACATAAAGCCTTCCTTCTTCAAGTTGATTGGACAGCTCCGTTCCTaGGCACTTCACTCCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DWFLKPRAHIKPSFFKLIGQLRS*ALHSTH Trigger: ATGAGTGGAGTGAAGTGCTCAGGAACGGAGCTGTCC...AATCAACTTGAAGAAGGAAGGCTTTATGTGAGCTCGTGGTTTGAGGAACCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR GCA 90 bp | TTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCAAGCACCAGGTCAGGTaGAGTTTCCGAGCAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FETEAWFNVQSGNLVAILKHQVR*SFRAGD Trigger: GTCGCCTGCTCGGAAACTGCACCTGACCTGGTGCTT...GAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | AAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTACTGTACAGAGAGCTaGTTATTTAGAAGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KTEFSPITSAVAEFMPAVYCTES*LFRSPL Trigger: CAGTGGACTTCTAAATAACCAGCTCTCTGTACAGTA...CACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | TCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCTACTGTACAGAGAGCTaGTTATTTAGAAGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPLQLLSSCLLCSQKKTAYCTES*LFRSPL Trigger: CAGTGGACTTCTAAATAACCAGCTCTCTGTACAGTA...GGCCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | TTAGAGCAGCAGAGAAGGGTAAGTGCTCAGAAAGCAGCTACAACCGATAGAGAGTCATGGTTGCAGCCTTaGGACTCTGTGTTGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEQQRRVSAQKAATTDRESWLQP*DSVLNL Trigger: CAAATTCAACACAGAGTCTCAAGGCTGCAACCATGA...CTCTCTATCGGTTGTAGCTGCTTTCTGAGCACTTACCCTTCTCTGCTGCTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | AGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGATTACAAGGTTTTATAGGCTTTaGGGTTGTAGGTCTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVEILWQSSCLSMSAGITRFYRL*GCRSSL Trigger: CAGAGAAGACCTACAACCCCAAAGCCTATAAAACCT...TGTAATCCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | TTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCTCGGGGCTGAAGATCTaGCTAGGCACACAACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FETEAWFNVQSGNLVAILSGLKI*LGTQLT Trigger: GGTCAGTTGTGTGCCTAGCCAGATCTTCAGCCCCGA...GAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | GATTGGTTCCTCAAACCACGAGCTCACATAAAGCCTTCCTTCTTCAAGTTGATTCACCAAGGGTTGCTCTaGCTTGTAGGCTTTCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DWFLKPRAHIKPSFFKLIHQGLL*LVGFPE Trigger: TTCCGGAAAGCCTACAAGCCAGAGCAACCCTTGGTG...AATCAACTTGAAGAAGGAAGGCTTTATGTGAGCTCGTGGTTTGAGGAACCAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCACTTGTCATCGCAGATaGTTCCCCATTCTCCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLGLMSRVEILWQSSCLSTCHRR*FPILHS Trigger: AGAATGGAGAATGGGGAACCATCTGCGATGACAAGT...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | CCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCTCTCTATTTGGTTaGTCAACGAATTGTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PITSAVAEFMPAVFPEENGSLFG*STNCQI Trigger: AATTTGACAATTCGTTGATCAACCAAATAGAGAGCC...GTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | ATAAGCTGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGGGCTCTCTATTTGGTTaGTCAACGAATTGTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ISCSKLVIKFPWPCARALGSLFG*STNCQI Trigger: AATTTGACAATTCGTTGATCAACCAAATAGAGAGCC...CAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCAGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | CTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCCCTCTGTCACAGGCTTaGGATGGCGAAAGGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLKLKLGLMSRVEILWQSPLSQA*DGERQK Trigger: TTTCTGCCTTTCGCCATCGCAAGCCTGTGACAGAGG...GGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | ATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCATGAGTGCAGGGTTTAGGCTCTCTATTTaGTTGATCAACGAATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSRVEILWQSSCLSMSAGFRLSI*LINELS Trigger: TGACAATTCGTTGATCAACCAAATAGAGAGCCTAAA...CCCTGCACTCATGCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CCA 90 bp | TCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCTTTAGGCTCTCTATTTaGTTGATCAACGAATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPLQLLSSCLLCSQKKTAFRLSI*LINELS Trigger: TGACAATTCGTTGATCAACCAAATAGAGAGCCTAAA...GGCCGTTTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | TACCCACTGAGCCATCTCACCAGCCCCAGGACGAGAGTTCTTAAGTGTCTTAATTATTTAGAAGTCCACTaGAGTGTTCGAACTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YPLSHLTSPRTRVLKCLNYLEVH*SVRTSV Trigger: AACAGAAGTTCGAACACTTCAGTGGACTTCTAAATA...ATTAAGACACTTAAGAACTCTCGTCCTGGGGCTGGTGAGATGGCTCAGTGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR GCA 90 bp | TTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCTGTTTGTTGCAGATCTaGTTCCAAGCCTTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FETEAWFNVQSGNLVAILCLLQI*FQALPS Trigger: GGAGGGCAAGGCTTGGAAGCAGATCTGCAACAAACA...GAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGTCCTCCATGGCACACTaGAGCAAGGACATGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FISFETEAWFNVQSGNLVSSMAH*SKDMGL Trigger: CAGGCCCATGTCCTTGCTGCAGTGTGCCATGGAGGA...CACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAGAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| 3UTR CAA 72 bp | CTTCCTTCCTTCCTTCCTTTCTTTCATTCATTTCTTTaGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPSFLPFFHSFL*KLKLGLMSRVE Trigger: TTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAGAAATGAATGAAAGAAAGGAAGGAAGGAAGGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR TCA 90 bp | TTCATTTCTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGTATTTAGAAGTCCACTaGAGTGTTCGAACTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FISFETEAWFNVQSGNLVYLEVH*SVRTSV Trigger: AACAGAAGTTCGAACACTTCAGTGGACTTCTAAATA...CACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAGAAATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 90 bp | GCACCAAACCGCACCCCGCCCTCGGGGCAGGCCACCTCCTCGTCATaGCGGCAGTGTGCTAGGGACAGCTCCGTTCCTGAGCACTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: APNRTPPSGQATSSS*RQCARDSSVPEHFT Trigger: AGTGAAGTGCTCAGGAACGGAGCTGTCCCTAGCACACTGCCGCCATGACGAGGAGGTGGCCTGCCCCGAGGGCGGGGTGCGGTTTGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 90 bp | GCCAGGCGGACCTGGATCTTGACCACATCGGAGGGCACCTGCCGCTaGTGGTGCTCAGGAGCGGGCTGCTGGAAGTACTCAGGGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARRTWILTTSEGTCR*WCSGAGCWKYSGYW Trigger: CCAGTACCCTGAGTACTTCCAGCAGCCCGCTCCTGAGCACCATCAGCGGCAGGTGCCCTCCGATGTGGTCAAGATCCAGGTCCGCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 90 bp | CCTCATTGTGCTTCCTCTTCTGGCCCGCCAGGCGGACCTGGATCTTaGCCACATCGGAGGGCACCTGCCGCTGATGGTGCTCAGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PHCASSSGPPGGPGS*PHRRAPAADGAQER Trigger: CCGCTCCTGAGCACCATCAGCGGCAGGTGCCCTCCGATGTGGTCAAGATCCAGGTCCGCCTGGCGGGCCAGAAGAGGAAGCACAATGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 90 bp | TCGGGGCTGAAGATCTGGCTAGGCACACAACTGACCACAGCTGGCTaGCCGTTCTCACAGGTGGCGTTCTTCACAGGGTCCCGGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: SGLKIWLGTQLTTAG*PFSQVAFFTGSRVT Trigger: CGTGACCCGGGACCCTGTGAAGAACGCCACCTGTGAGAACGGGCAGCCAGCTGTGGTCAGTTGTGTGCCTAGCCAGATCTTCAGCCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 90 bp | TATTGTCCAACCAGATGGGGCCTTCGCCTGGACCGTAGGAGGAGCTaGCAGCCCAGGACTTGGCCTCTACATAGCCCACTTGCCGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YCPTRWGLRLDRRRS*QPRTWPLHSPLAGR Trigger: TCTGCCGGCAAGTGGGCTATGTAGAGGCCAAGTCCTGGGCTGCCAGCTCCTCCTACGGTCCAGGCGAAGGCCCCATCTGGTTGGACAATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 90 bp | TCCATCGGGGCTGAAGATCTGGCTAGGCACACAACTGACCACAGCTaGCTGCCCGTTCTCACAGGTGGCGTTCTTCACAGGGTCCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SIGAEDLARHTTDHS*LPVLTGGVLHRVPG Trigger: ACCCGGGACCCTGTGAAGAACGCCACCTGTGAGAACGGGCAGCCAGCTGTGGTCAGTTGTGTGCCTAGCCAGATCTTCAGCCCCGATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 90 bp | GTAGGCAGTCTGCTGGACAATCTCAGCATTAAGCACCAGGTCAGGTaGAGTTTCCGAGCAGGCGACTCCAGCACCAAACCGCACCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSLLDNLSIKHQVR*SFRAGDSSTKPHPA Trigger: GGCGGGGTGCGGTTTGGTGCTGGAGTCGCCTGCTCGGAAACTGCACCTGACCTGGTGCTTAATGCTGAGATTGTCCAGCAGACTGCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 90 bp | CAGGCGCACCAAGGGTTGCTCTGGCTTGTAGGCTTTCCGGAACCTTaGGGGTCCATCGGGGCTGAAGATCTGGCTAGGCACACAACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QAHQGLLWLVGFPEP*GSIGAEDLARHTTD Trigger: GTCAGTTGTGTGCCTAGCCAGATCTTCAGCCCCGATGGACCCTCAAGGTTCCGGAAAGCCTACAAGCCAGAGCAACCCTTGGTGCGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | GTGGGAGTTTGGAAGACCAGAGCGCCAAGTGGAACGTGGAGAGTGGAGGCCTGGACGTCTTCAGTGTGCTaGCAGTCAGTGACACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGVWKTRAPSGTWRVEAWTSSVC*QSVTPQ Trigger: CTGGGGTGTCACTGACTGCAAGCACACTGAAGACGT...CCAGGCCTCCACTCTCCACGTTCCACTTGGCGCTCTGGTCTTCCAAACTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS GCA 90 bp | AAGCCTTGCCCTCCTTCACCTCCACGTAGCCCTCTGTCACAGGCTTaGGATGGCGAAAGGCAGAAAGGATGGGCCGAATCCGGATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KPCPPSPPRSPLSQA*DGERQKGWAESGCL Trigger: AAGACATCCGGATTCGGCCCATCCTTTCTGCCTTTCGCCATCGCAAGCCTGTGACAGAGGGCTACGTGGAGGTGAAGGAGGGCAAGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCGTGACACCCCAGCCATaGGAGGAGCAAGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TEFSPITSAVAEFMPAVFVTPQP*EEQDAR Trigger: CCTGGCATCTTGCTCCTCCAATGGCTGGGGTGTCAC...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 90 bp | GTCCCTGTGCACTGGACTTCATTGAGATGGATGGGCCCAATCCCTTaGCCTAGTCTGGAGCCTGTGATGGCCTCTTTAGCGGTCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VPVHWTSLRWMGPIP*PSLEPVMASLAVPK Trigger: CTTTGGGACCGCTAAAGAGGCCATCACAGGCTCCAGACTAGGGCAAGGGATTGGGCCCATCCATCTCAATGAAGTCCAGTGCACAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | CTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCCCCTAAGGCCTCAGGCTGTCCAGTGTTTGTaGCAGATCTGCTTCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LVIKFPWPCARALPLRPQAVQCL*QICFQA Trigger: GGCTTGGAAGCAGATCTGCAACAAACACTGGACAGC...CTGAGGCCTTAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | GAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGACGGAAGGGCCCAGCTaGCAGCTGGAGATATGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: EKRSSARSPLQLLSSCLLTEGPS*QLEICA Trigger: AGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCGT...CAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | GATAGAGAGCATGTTGCCTTACAAGTGTGCAGTCCTGGGTTTGATCCCAGCACTTGGCCCTCAGCCACCTaGGTGCCGTTGAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DREHVALQVCSPGFDPSTWPSAT*VPLRLS Trigger: GCTGAGCCTCAACGGCACCAAGGTGGCTGAGGGCCA...AGTGCTGGGATCAAACCCAGGACTGCACACTTGTAAGGCAACATGCTCTCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CAA 90 bp | TTCATGCCTGCTGTGTTCCCAGAAGAAAACGGCCCCTCTGTGCAGAGCACAGATATCTGCTTCCAAGCCTaGCCCTCCTTCACCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FMPAVFPEENGPSVQSTDICFQA*PSFTST Trigger: CGTGGAGGTGAAGGAGGGCAAGGCTTGGAAGCAGAT...ATCTGTGCTCTGCACAGAGGGGCCGTTTTCTTCTGGGAACACAGCAGGCATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | AAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGCAGGCGCACCAAGGGTaGCTCTGGCTTGTAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KTEFSPITSAVAEFMPAVQAHQG*LWLVGF Trigger: AAAGCCTACAAGCCAGAGCAACCCTTGGTGCGCCTG...CACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 90 bp | ACATGCCACAGACCACGTGGGAATTCTTGGCTGTCCAGTGTTTGTTaGAGATCTGCTTCCAAGCCTTGCCCTCCTTCACCTCCACGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCHRPRGNSWLSSVC*RSASKPCPPSPPRS Trigger: GCTACGTGGAGGTGAAGGAGGGCAAGGCTTGGAAGCAGATCTGCAACAAACACTGGACAGCCAAGAATTCCCACGTGGTCTGTGGCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 90 bp | CCGCGAGGCAAAGGTTTTATAGGCTTTGGGGTTGTAGGTCTTCTCTaGAGGGAAGCCGAACATGCCACAGACCACGTGGGAATTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRGKGFIGFGVVGLL*REAEHATDHVGILG Trigger: GCCAAGAATTCCCACGTGGTCTGTGGCATGTTCGGCTTCCCTGCAGAGAAGACCTACAACCCCAAAGCCTATAAAACCTTTGCCTCGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | AAGTTACAGGGGTTAAGAGGTGCTCAGGGAAAGAGTAAGACACACCAGAGAGCTTCCACGCGGCCCTCATaGTGCTTCCTCTTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLQGLRGAQGKSKTHQRASTRPS*CFLFWP Trigger: GGGCCAGAAGAGGAAGCACAATGAGGGCCGCGTGGA...AGCTCTCTGGTGTGTCTTACTCTTTCCCTGAGCACCTCTTAACCCCTGTAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CAA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCGCTGTCCAGTGTTTGTaGCAGATCTGCTTCCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TEFSPITSAVAEFMPAVFAVQCL*QICFQA Trigger: GGCTTGGAAGCAGATCTGCAACAAACACTGGACAGC...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | TGCTCTAAGCTTGTCATCAAGTTTCCATGGCCATGTGCCCGAGCCCTGCCCCTAAAGTCAGACTGGCCATaGTTGTGGATCTGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSKLVIKFPWPCARALPLKSDWP*LWIWEE Trigger: CTCCTCCCAGATCCACAACAATGGCCAGTCTGACTT...TAGGGGCAGGGCTCGGGCACATGGCCATGGAAACTTGATGACAAGCTTAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 90 bp | AATTCTTGGCTGTCCAGTGTTTGTTGCAGATCTGCTTCCAAGCCTTaGCCTCCTTCACCTCCACGTAGCCCTCTGTCACAGGCTTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: NSWLSSVCCRSASKP*PPSPPRSPLSQACD Trigger: ATCGCAAGCCTGTGACAGAGGGCTACGTGGAGGTGAAGGAGGGCAAGGCTTGGAAGCAGATCTGCAACAAACACTGGACAGCCAAGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 90 bp | AGTGTGCTTGCAGTCAGTGACACCCCAGCCATTGGAGGAGCAAGATaGCAGGGTCGACTCTTTGCCAGTACAGTAGATATTGTCCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SVLAVSDTPAIGGAR*QGRLFASTVDIVQP Trigger: TGGTTGGACAATATCTACTGTACTGGCAAAGAGTCGACCCTGGCATCTTGCTCCTCCAATGGCTGGGGTGTCACTGACTGCAAGCACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | GCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCCAGAAGAAAACCACGTGGGAATTCTaGGCTGTCCAGTGTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSPLQLLSSCLLCSQKKTTWEF*AVQCLL Trigger: CAACAAACACTGGACAGCCAAGAATTCCCACGTGGT...TTTCTTCTGGGAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGATACCAGGTCCCACTaGTCATCGCAGATGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NDLRRGKTEFSPITSAVADTRSH*SSQMVP Trigger: GGGAACCATCTGCGATGACAAGTGGGACCTGGTATC...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | AAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCCTGCCTCAGCGATACCAGGTCCCACTaGTCATCGCAGATGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLGLMSRVEILWQSSCLSDTRSH*SSQMVP Trigger: GGGAACCATCTGCGATGACAAGTGGGACCTGGTATC...GCTGAGGCAGGAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCTGGCCCTCAGCCACCTaGGTGCCGTTGAGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FETEAWFNVQSGNLVAILWPSAT*VPLRLS Trigger: GCTGAGCCTCAACGGCACCAAGGTGGCTGAGGGCCA...GAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 90 bp | GGGATGTTGCATCGCACCCCGGCATCTTCTTCATGGTTGCAGCCTTaGGACTCTGTGTTGAATTTGCAGTCTATGATGGACTTCTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GMLHRTPASSSWLQP*DSVLNLQSMMDFSV Trigger: GACTGAGAAGTCCATCATAGACTGCAAATTCAACACAGAGTCTCAAGGCTGCAACCATGAAGAAGATGCCGGGGTGCGATGCAACATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCTCCACGCGGCCCTCATaGTGCTTCCTCTTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FETEAWFNVQSGNLVAILSTRPS*CFLFWP Trigger: GGGCCAGAAGAGGAAGCACAATGAGGGCCGCGTGGA...GAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | TGCCTTTTAGTAAGTGGGGTTTCTGGCAAAGTTGTAGGGAATTGTATGTCTACAGTGACACCCCAGCCATaGGAGGAGCAAGATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLLVSGVSGKVVGNCMSTVTPQP*EEQDAR Trigger: CCTGGCATCTTGCTCCTCCAATGGCTGGGGTGTCAC...TGTAGACATACAATTCCCTACAACTTTGCCAGAAACCCCACTTACTAAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022660.14 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCACGGAAGGGCCCAGCTaGCAGCTGGAGATATGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLKLKLGLMSRVEILWQSTEGPS*QLEICA Trigger: AGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCGT...GGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | GAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTTCATGGTTGCAGCCTaGAGACTCTGTGTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: EKRSSARSPLQLLSSCLLFMVAA*RLCVEF Trigger: AAATTCAACACAGAGTCTCAAGGCTGCAACCATGAA...CAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | ACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTGAGTTCATGCCTGCTGTGTTCCTGCACTTCATGATGTaGTTAGAGAAATCTGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: TEFSPITSAVAEFMPAVFLHFMM*LEKSDS Trigger: AGAATCAGATTTCTCTAACAACATCATGAAGTGCAG...GAACACAGCAGGCATGAACTCAGCAACTGCAGAGGTGATCGGGCTGAACTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | AATGACCTAAGAAGGGGAAAAACGGAGTTCAGCCCGATCACCTCTGCAGTTGCTTTCATGGTTGCAGCCTaGAGACTCTGTGTTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: NDLRRGKTEFSPITSAVAFMVAA*RLCVEF Trigger: AAATTCAACACAGAGTCTCAAGGCTGCAACCATGAA...AGCAACTGCAGAGGTGATCGGGCTGAACTCCGTTTTTCCCCTTCTTAGGTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | CCTCTGTGCAGAGCACAGATGATGTCACACTTGGGACATGCCAAAGCTCGGATGCTGCACTTCATGATGTaGTTAGAGAAATCTGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLCRAQMMSHLGHAKARMLHFMM*LEKSDS Trigger: AGAATCAGATTTCTCTAACAACATCATGAAGTGCAG...CATCCGAGCTTTGGCATGTCCCAAGTGTGACATCATCTGTGCTCTGCACAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | CTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCAGACTGGCCATTGTaGTGGATCTGGGAGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLKLKLGLMSRVEILWQSSDWPL*WIWEEK Trigger: CTTCTCCTCCCAGATCCACAACAATGGCCAGTCTGA...GGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGATCTGCTTCCAAGCCTaGCCCTCCTTCACCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: FISFETEAWFNVQSGNLVICFQA*PSFTST Trigger: CGTGGAGGTGAAGGAGGGCAAGGCTTGGAAGCAGAT...CACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAGAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | TTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGGCAATCCTCACCACGTGGGAATTCTaGGCTGTCCAGTGTTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FETEAWFNVQSGNLVAILTTWEF*AVQCLL Trigger: CAACAAACACTGGACAGCCAAGAATTCCCACGTGGT...GAGGATTGCCACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCTTTTGAAACTGAAGCTTGGTTTAATGTCCAGAGTGGAAATCTTGTGCAGGCGCACCAAGGGTaGCTCTGGCTTGTAGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FISFETEAWFNVQSGNLVQAHQG*LWLVGF Trigger: AAAGCCTACAAGCCAGAGCAACCCTTGGTGCGCCTG...CACAAGATTTCCACTCTGGACATTAAACCAAGCTTCAGTTTCAAAAGAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 90 bp | GGCCGAATCCGGATGTCTTCCACCTGTATATTTAGGCTCTCTATTTaGTTGATCAACGAATTGTCAAATTTGAAGCCAGGAATTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRIRMSSTCIFRLSI*LINELSNLKPGILF Trigger: GAAAAGAATTCCTGGCTTCAAATTTGACAATTCGTTGATCAACCAAATAGAGAGCCTAAATATACAGGTGGAAGACATCCGGATTCGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 72 bp | GGGAGGAGAAGCGTAAAAGGCGCCGGTGGCCTCTGGTaGGGTCGGTGTGCACAGCGGAGGCGGAGAGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GRRSVKGAGGLW*GRCAQRRRRGS Trigger: ACTGCCTCTCCGCCTCCGCTGTGCACACCGACCCCACCAGAGGCCACCGGCGCCTTTTACGCTTCTCCTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 72 bp | TCTGGGAGGAGAAGCGTAAAAGGCGCCGGTGGCCTCTaGTGGGGTCGGTGTGCACAGCGGAGGCGGAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGRRSVKGAGGL*WGRCAQRRRRG Trigger: GCCTCTCCGCCTCCGCTGTGCACACCGACCCCACCAGAGGCCACCGGCGCCTTTTACGCTTCTCCTCCCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 72 bp | GCTTCCTCTTCTGGCCCGCCAGGCGGACCTGGATCTTaGCCACATCGGAGGGCACCTGCCGCTGATGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSSGPPGGPGS*PHRRAPAADGA Trigger: AGCACCATCAGCGGCAGGTGCCCTCCGATGTGGTCAAGATCCAGGTCCGCCTGGCGGGCCAGAAGAGGAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | TCTTCACAGGGTCCCGGGTCACGGAAGGGCCCAGCTTaGAGCTGGAGATATGCGCTTCAGTGCCCGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSQGPGSRKGPA*SWRYALQCPCS Trigger: ACTGCACGGGCACTGAAGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCGTGACCCGGGACCCTGTGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 72 bp | TGTGCACAGCGGAGGCGGAGAGGCAGTTCTCCTCCATaGCACACTGCAGCAAGGACATGGGCCTGTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CAQRRRRGSSPP*HTAARTWACPP Trigger: TGGAGGACAGGCCCATGTCCTTGCTGCAGTGTGCCATGGAGGAGAACTGCCTCTCCGCCTCCGCTGTGCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CAA 72 bp | TTCTTCACAGGGTCCCGGGTCACGGAAGGGCCCAGCTaGCAGCTGGAGATATGCGCTTCAGTGCCCGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FFTGSRVTEGPS*QLEICASVPVQ Trigger: CTGCACGGGCACTGAAGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCGTGACCCGGGACCCTGTGAAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CAA 90 bp | GTAGGAGGAGCTGGCAGCCCAGGACTTGGCCTCTACATAGCCCACTaGCCGGCAGACCACATGGGCGGCATGGATCGAGAAGTCATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGGAGSPGLGLYIAH*PADHMGGMDREVIV Trigger: GACGATGACTTCTCGATCCATGCCGCCCATGTGGTCTGCCGGCAAGTGGGCTATGTAGAGGCCAAGTCCTGGGCTGCCAGCTCCTCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 72 bp | ACCTGGATCTTGACCACATCGGAGGGCACCTGCCGCTaGTGGTGCTCAGGAGCGGGCTGCTGGAAGTACTCA | + |
|
Preference number: 6 (lower is better) Translates to: TWILTTSEGTCR*WCSGAGCWKYS Trigger: TGAGTACTTCCAGCAGCCCGCTCCTGAGCACCATCAGCGGCAGGTGCCCTCCGATGTGGTCAAGATCCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 72 bp | TTCCGGAACCTTGAGGGTCCATCGGGGCTGAAGATCTaGCTAGGCACACAACTGACCACAGCTGGCTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: FRNLEGPSGLKI*LGTQLTTAGCP Trigger: CGGGCAGCCAGCTGTGGTCAGTTGTGTGCCTAGCCAGATCTTCAGCCCCGATGGACCCTCAAGGTTCCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CAA 90 bp | CAGGTGGCGTTCTTCACAGGGTCCCGGGTCACGGAAGGGCCCAGCTaGCAGCTGGAGATATGCGCTTCAGTGCCCGTGCAGTTCATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QVAFFTGSRVTEGPS*QLEICASVPVQFIE Trigger: TTCTATGAACTGCACGGGCACTGAAGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCGTGACCCGGGACCCTGTGAAGAACGCCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 72 bp | CAAGGGTTGCTCTGGCTTGTAGGCTTTCCGGAACCTTaGGGGTCCATCGGGGCTGAAGATCTGGCTAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: QGLLWLVGFPEP*GSIGAEDLARH Trigger: GTGCCTAGCCAGATCTTCAGCCCCGATGGACCCTCAAGGTTCCGGAAAGCCTACAAGCCAGAGCAACCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CAA 72 bp | TGGCAGTCGTGCCAAATCCACGCATGGCGGCCATTCTaGGGGCGGAAGTCAGACTGGCCATTGTTGTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: WQSCQIHAWRPF*GRKSDWPLLWI Trigger: GATCCACAACAATGGCCAGTCTGACTTCCGCCCCAAGAATGGCCGCCATGCGTGGATTTGGCACGACTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | CGGGTCACGGAAGGGCCCAGCTTGCAGCTGGAGATATaGGCTTCAGTGCCCGTGCAGTTCATAGAAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVTEGPSLQLEI*ASVPVQFIENF Trigger: GAAGTTTTCTATGAACTGCACGGGCACTGAAGCGCATATCTCCAGCTGCAAGCTGGGCCCTTCCGTGACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | TATTTCCATGCCAGTACCAGGTCTCCTGAAAGGCATTaGTGGCAAAGCCCAGGCCTAGCTGCCGGCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: YFHASTRSPERH*WQSPGLAAGRP Trigger: TGGTCTGCCGGCAGCTAGGCCTGGGCTTTGCCAGCAATGCCTTTCAGGAGACCTGGTACTGGCATGGAAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | CTGCTGGACAATCTCAGCATTAAGCACCAGGTCAGGTaGAGTTTCCGAGCAGGCGACTCCAGCACCAAACCG | + |
|
Preference number: 6 (lower is better) Translates to: LLDNLSIKHQVR*SFRAGDSSTKP Trigger: CGGTTTGGTGCTGGAGTCGCCTGCTCGGAAACTGCACCTGACCTGGTGCTTAATGCTGAGATTGTCCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CCA 72 bp | ACTCTTTGCCAGTACAGTAGATATTGTCCAACCAGATaGGGCCTTCGCCTGGACCGTAGGAGGAGCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLCQYSRYCPTR*GLRLDRRRSWQ Trigger: CTGCCAGCTCCTCCTACGGTCCAGGCGAAGGCCCCATCTGGTTGGACAATATCTACTGTACTGGCAAAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CAA 72 bp | TCTTCAGTGTGCTTGCAGTCAGTGACACCCCAGCCATaGGAGGAGCAAGATGCCAGGGTCGACTCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSVCLQSVTPQP*EEQDARVDSLP Trigger: TGGCAAAGAGTCGACCCTGGCATCTTGCTCCTCCAATGGCTGGGGTGTCACTGACTGCAAGCACACTGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | TCTCTGTTAGCACCTCCACTCGGCCCTCATAAGGATTaGGGCCTCCATTCAGGCGCACCTTTTTCTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLLAPPLGPHKD*GLHSGAPFSGN Trigger: GTTTCCAGAAAAAGGTGCGCCTGAATGGAGGCCGCAATCCTTATGAGGGCCGAGTGGAGGTGCTAACAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | AGCCATTGGAGGAGCAAGATGCCAGGGTCGACTCTTTaGCAGTACAGTAGATATTGTCCAACCAGATGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SHWRSKMPGSTL*QYSRYCPTRWG Trigger: GCCCCATCTGGTTGGACAATATCTACTGTACTGGCAAAGAGTCGACCCTGGCATCTTGCTCCTCCAATGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | GCAGTCAGTGACACCCCAGCCATTGGAGGAGCAAGATaGCAGGGTCGACTCTTTGCCAGTACAGTAGATATT | + |
|
Preference number: 6 (lower is better) Translates to: AVSDTPAIGGAR*QGRLFASTVDI Trigger: AATATCTACTGTACTGGCAAAGAGTCGACCCTGGCATCTTGCTCCTCCAATGGCTGGGGTGTCACTGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS GCA 72 bp | AAAGGTTTTATAGGCTTTGGGGTTGTAGGTCTTCTCTaGAGGGAAGCCGAACATGCCACAGACCACGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KGFIGFGVVGLL*REAEHATDHVG Trigger: TCCCACGTGGTCTGTGGCATGTTCGGCTTCCCTGCAGAGAAGACCTACAACCCCAAAGCCTATAAAACCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS CAA 72 bp | TCCGTTCCTGAGCACTTCACTCCACTCATGACCACGTaGTTGGCGAAGATATTTCCATGCCAGTACCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVPEHFTPLMTT*LAKIFPCQYQV Trigger: GACCTGGTACTGGCATGGAAATATCTTCGCCAACAACGTGGTCATGAGTGGAGTGAAGTGCTCAGGAACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
||
| CDS TCA 72 bp | CATCGCACCCCGGCATCTTCTTCATGGTTGCAGCCTTaGGACTCTGTGTTGAATTTGCAGTCTATGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: HRTPASSSWLQP*DSVLNLQSMMD Trigger: GTCCATCATAGACTGCAAATTCAACACAGAGTCTCAAGGCTGCAACCATGAAGAAGATGCCGGGGTGCGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| CDS CCA 72 bp | CGGATGTCTTCCACCTGTATATTTAGGCTCTCTATTTaGTTGATCAACGAATTGTCAAATTTGAAGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RMSSTCIFRLSI*LINELSNLKPG Trigger: TCCTGGCTTCAAATTTGACAATTCGTTGATCAACCAAATAGAGAGCCTAAATATACAGGTGGAAGACATCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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| CDS CAA 90 bp | TGTATATTTAGGCTCTCTATTTGGTTGATCAACGAATTGTCAAATTaGAAGCCAGGAATTCTTTTCTCACTACACACCACTCCAACGTCT | + |
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Preference number: 6 (lower is better) Translates to: CIFRLSIWLINELSN*KPGILFSLHTTPTS Trigger: AGACGTTGGAGTGGTGTGTAGTGAGAAAAGAATTCCTGGCTTCAAATTTGACAATTCGTTGATCAACCAAATAGAGAGCCTAAATATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022660.14 ENSMUST00000100420.4 |
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