Pregenerated sensors for LOXL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032334Ensembl transcript IDs: ENSMUST00000061799.10
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTGGTTTGGGTCCATGTTCACTCCCTGAGGCCGGCAGGGAGGGATaGCCCAGCGGCCAGCTGCCTTTGCCTTGGGCTAGGCGGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: CGLGPCSLPEAGREG*PSGQLPLPWARRLS Trigger: GCTCAGCCGCCTAGCCCAAGGCAAAGGCAGCTGGCCGCTGGGGCATCCCTCCCTGCCGGCCTCAGGGAGTGAACATGGACCCAAACCACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 90 bp | GCCAAGTCTCTCTCCCGTTCCTACAGTGATTCTCCAGGGTGGCAGTaGCAGGTGGGCGGAAAGAAAGCTCGAGAGCTGGTGGGAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: AKSLSRSYSDSPGWQ*QVGGKKARELVGEE Trigger: CTCCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAGAGACTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 90 bp | CTCTCTCCCGTTCCTACAGTGATTCTCCAGGGTGGCAGTGGCAGGTaGGCGGAAAGAAAGCTCGAGAGCTGGTGGGAGAGGAGCAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: LSPVPTVILQGGSGR*AERKLESWWERSKE Trigger: TTCTTTGCTCCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR TCA 90 bp | GGCATAGCATGCCTGGCTCGGCATCAAACGCTAGAACTAGAGCCTTaGGCCAAGTCTCTCTCCCGTTCCTACAGTGATTCTCCAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GIACLARHQTLELEP*AKSLSRSYSDSPGW Trigger: CCACCCTGGAGAATCACTGTAGGAACGGGAGAGAGACTTGGCTCAAGGCTCTAGTTCTAGCGTTTGATGCCGAGCCAGGCATGCTATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR TCA 90 bp | CTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACACAAAGGCTaGAACCCCAGAATATCTCTTGGGCTTGACCCAGCTGTGGTCCGC | + |
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Preference number: 1 (lower is better) Translates to: LAVQQLPFNIFLHKG*NPRISLGLDPAVVR Trigger: GCGGACCACAGCTGGGTCAAGCCCAAGAGATATTCTGGGGTTTCAGCCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 90 bp | CAGGGTGGCAGTGGCAGGTGGGCGGAAAGAAAGCTCGAGAGCTGGTaGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QGGSGRWAERKLESW*ERSKEVDIFFSRLP Trigger: AGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 90 bp | CTCCAGGGTGGCAGTGGCAGGTGGGCGGAAAGAAAGCTCGAGAGCTaGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTT | + |
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Preference number: 1 (lower is better) Translates to: LQGGSGRWAERKLES*WERSKEVDIFFSRL Trigger: AAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 90 bp | CTAGGAGATGAAGCCACCTACCACCTCTGTCCTCATTCTATGAGATaGGGTCCTCTGTCCAGGAAGACGACATGGCTTTGGACTAAACTC | + |
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Preference number: 1 (lower is better) Translates to: LGDEATYHLCPHSMR*GPLSRKTTWLWTKL Trigger: GAGTTTAGTCCAAAGCCATGTCGTCTTCCTGGACAGAGGACCCCATCTCATAGAATGAGGACAGAGGTGGTAGGTGGCTTCATCTCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR GCA 90 bp | CTCCCTAGAGCCTCCAGACCCACTACTCTACCTAACTCTAACCCATaGTATCCCCTCTGCCAAGAATTCATGTGTCTTCTCTCTTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: LPRASRPTTLPNSNP*YPLCQEFMCLLSLG Trigger: TCCCAAAGAGAGAAGACACATGAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAGTAGTGGGTCTGGAGGCTCTAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 90 bp | GTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCTaGTCCAGACTGGTGTCCAGGAGTTCTAGGATACCATATCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: VGEEQRSGHFLFTSS*SRLVSRSSRIPYPG Trigger: CCCTGGATATGGTATCCTAGAACTCCTGGACACCAGTCTGGACCAGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 90 bp | AGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCTGGTCCAGACTaGTGTCCAGGAGTTCTAGGATACCATATCCAGGGAAGGATAGTG | + |
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Preference number: 1 (lower is better) Translates to: SKEVDIFFSRLPGPD*CPGVLGYHIQGRIV Trigger: CACTATCCTTCCCTGGATATGGTATCCTAGAACTCCTGGACACCAGTCTGGACCAGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR TCA 90 bp | CTCCAGGGTGGCAGTGGCAGGTGGGCGGAAAGAAAGCTCGAGAGCTGGTGGGAGAATATCTCTTGGGCTTaGCCCAGCTGTGGTCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: LQGGSGRWAERKLESWWENISWA*PSCGPP Trigger: TGGCGGACCACAGCTGGGTCAAGCCCAAGAGATATT...CTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CAA 90 bp | AGAAGTAGGTACAAGACAGGGTCTGGCATCCAGAATCCCTGTGGTTaGGGTCCATGTTCACTCCCTGAGGCCGGCAGGGAGGGATGCCCC | + |
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Preference number: 2 (lower is better) Translates to: RSRYKTGSGIQNPCG*GPCSLPEAGREGCP Trigger: GGGGCATCCCTCCCTGCCGGCCTCAGGGAGTGAACATGGACCCAAACCACAGGGATTCTGGATGCCAGACCCTGTCTTGTACCTACTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCGTTCCTACAGTGATTCTCCAGGGTGGCAGTGGCAGGTGGGCGGAAAGAAGCTCGAGAGCTGGTaGGAGAGGAGCAAAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSRSYSDSPGWQWQVGGKKLESW*ERSKEV Trigger: CACTTCTTTGCTCCTCTCCCACCAGCTCTCGAGCTT...CTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR GCA 90 bp | CTAGGAGATGAAGCCACCTACCACCTCTGTCCTCATTCTATGAGATGGGGTCCTCCTCATGGGGGAGGCTaGCTGGAAGCAGGTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LGDEATYHLCPHSMRWGPPHGGG*LEAGPA Trigger: AGCAGGACCTGCTTCCAGGCAGCCTCCCCCATGAGG...AGGACCCCATCTCATAGAATGAGGACAGAGGTGGTAGGTGGCTTCATCTCCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CAA 90 bp | GCCCAGCACTGTGAAAGCTGTGGTAAGGGCCCAGGGCTGCTGCCATaGGTGGTGGTGATGATGGTGGTGATGACAGTGATGATGATGATG | + |
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Preference number: 2 (lower is better) Translates to: AQHCESCGKGPGLLP*VVVMMVVMTVMMMM Trigger: CATCATCATCATCACTGTCATCACCACCATCATCACCACCACCAATGGCAGCAGCCCTGGGCCCTTACCACAGCTTTCACAGTGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTCCCAAGGATGCCCAGCACTGTGAAAGCTGTGGTAAGGGCCCAGGGCTGCCTCATTCTATGAGATaGGGTCCTCTGTCCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SCPKDAQHCESCGKGPGLPHSMR*GPLSRK Trigger: CTTCCTGGACAGAGGACCCCATCTCATAGAATGAGG...CAGCCCTGGGCCCTTACCACAGCTTTCACAGTGCTGGGCATCCTTGGGACAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CAA 90 bp | TCCGCCAAACCACAGGGCACAGCAGAGCTCCAGACTAGAAAACCCTaGTTTTATTCAGCACCCGGGCAATCTTGCTGTGTGGGATGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SAKPQGTAELQTRKP*FYSAPGQSCCVGWP Trigger: TGGCCATCCCACACAGCAAGATTGCCCGGGTGCTGAATAAAACAAGGGTTTTCTAGTCTGGAGCTCTGCTGTGCCCTGTGGTTTGGCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CCA 90 bp | CGAGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCATGGGGGAGGCTGCCTaGAAGCAGGTCCTGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: RELVGEEQRSGHFLFTSSMGEAA*KQVLLF Trigger: GAAAAGCAGGACCTGCTTCCAGGCAGCCTCCCCCAT...GGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCCTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCATCCAGAATCCCTGTaGTTTGGGTCCATGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: WPGSCWSPGRPAATLQHFHPESL*FGSMFT Trigger: AGTGAACATGGACCCAAACCACAGGGATTCTGGATG...AAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGAAGGTAGACCTTTCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTCCTGGAAGCAGGTCCTaGTTTTCAAGGAGAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: FGKVDLSHSKGPLPLSSCPGSRS*FSRRDK Trigger: CTTGTCTCTCCTTGAAAAGCAGGACCTGCTTCCAGG...ACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGAAAGGTCTACCTTCCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR GCA 90 bp | CGAGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCCCTAACTCTAACCCATaGTATCCCCTCTGCCAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RELVGEEQRSGHFLFTSSPNSNP*YPLCQE Trigger: TTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGG...GGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACACAAAGGCAACAACAGACACCATaGTGTTGTAGAGGAGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: CWSPGRPAATLQHFPTQRQQQTP*CCRGEV Trigger: TACTTCTCCTCTACAACACCATGGTGTCTGTTGTTG...CCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR GCA 90 bp | GTGGACATTTTCTTTTCACGTCTTCCTGGTCCAGACTGGTGTCCAGGAGTTCTACCATGCTATCCCCTCTaGCAAGAATTCATGTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: VDIFFSRLPGPDWCPGVLPCYPL*QEFMCL Trigger: AAGACACATGAATTCTTGGCAGAGGGGATAGCATGG...TAGAACTCCTGGACACCAGTCTGGACCAGGAAGACGTGAAAAGAAAATGTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | AGGGAGGGATGCCCCAGCGGCCAGCTGCCTTTGCCTTaGGCTAGGCGGCTGAGCCTCATGGGGGAGGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: REGCPSGQLPLP*ARRLSLMGEAA Trigger: GGCAGCCTCCCCCATGAGGCTCAGCCGCCTAGCCCAAGGCAAAGGCAGCTGGCCGCTGGGGCATCCCTCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR TCA 72 bp | CCAGCGGCCAGCTGCCTTTGCCTTGGGCTAGGCGGCTaGGCCTCATGGGGGAGGCTGCCTGGAAGCAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: PAASCLCLGLGG*ASWGRLPGSRS Trigger: GGACCTGCTTCCAGGCAGCCTCCCCCATGAGGCTCAGCCGCCTAGCCCAAGGCAAAGGCAGCTGGCCGCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CAA 90 bp | TCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTCCCAAGGATGCCCAGCACAGCGGCCAGCTGCCTTaGCCTTGGGCTAGGCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SHSKGPLPLSSCPKDAQHSGQLP*PWARRL Trigger: CAGCCGCCTAGCCCAAGGCAAAGGCAGCTGGCCGCT...GTGCTGGGCATCCTTGGGACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | GTTCCTACAGTGATTCTCCAGGGTGGCAGTGGCAGGTaGGCGGAAAGAAAGCTCGAGAGCTGGTGGGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: VPTVILQGGSGR*AERKLESWWER Trigger: CCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | CTCTCCCGTTCCTACAGTGATTCTCCAGGGTGGCAGTaGCAGGTGGGCGGAAAGAAAGCTCGAGAGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: LSRSYSDSPGWQ*QVGGKKARELV Trigger: CACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CAA 90 bp | TCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTCCCAAGGATGCCCAGCACACCCCAGAATATCTCTaGGGCTTGACCCAGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SHSKGPLPLSSCPKDAQHTPEYL*GLTQLW Trigger: CCACAGCTGGGTCAAGCCCAAGAGATATTCTGGGGT...GTGCTGGGCATCCTTGGGACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CAA 90 bp | TTTGGGAAGGTAGACCTTTCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTCTGGTGGCCTGGAAGTaGCTGGAGTCCTGGCCGTCC | + |
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Preference number: 3 (lower is better) Translates to: FGKVDLSHSKGPLPLSSCLVAWK*LESWPS Trigger: GGACGGCCAGGACTCCAGCAACTTCCAGGCCACCAG...ACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGAAAGGTCTACCTTCCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR TCA 72 bp | AGAGCCTTGAGCCAAGTCTCTCTCCCGTTCCTACAGTaGTTCTCCAGGGTGGCAGTGGCAGGTGGGCGGAAA | + |
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Preference number: 3 (lower is better) Translates to: RALSQVSLPFLQ*FSRVAVAGGRK Trigger: TTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAGAGACTTGGCTCAAGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | GAAACCCCAGAATATCTCTTGGGCTTGACCCAGCTGTaGTCCGCCAAACCACAGGGCACAGCAGAGCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: ETPEYLLGLTQL*SAKPQGTAELQ Trigger: CTGGAGCTCTGCTGTGCCCTGTGGTTTGGCGGACCACAGCTGGGTCAAGCCCAAGAGATATTCTGGGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CAA 90 bp | TGGCCTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTGAATATCTCTTGGGCTaGACCCAGCTGTGGTCCGCC | + |
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Preference number: 3 (lower is better) Translates to: WPGSCWSPGRPAATLQHFEYLLG*TQLWSA Trigger: GGCGGACCACAGCTGGGTCAAGCCCAAGAGATATTC...AAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | AAGTCTCTCTCCCGTTCCTACAGTGATTCTCCAGGGTaGCAGTGGCAGGTGGGCGGAAAGAAAGCTCGAGAG | + |
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Preference number: 3 (lower is better) Translates to: KSLSRSYSDSPG*QWQVGGKKARE Trigger: CTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR TCA 72 bp | ACACAAAGGCTGAAACCCCAGAATATCTCTTGGGCTTaGCCCAGCTGTGGTCCGCCAAACCACAGGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: TQRLKPQNISWA*PSCGPPNHRAQ Trigger: CTGTGCCCTGTGGTTTGGCGGACCACAGCTGGGTCAAGCCCAAGAGATATTCTGGGGTTTCAGCCTTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CAA 90 bp | GTGGGCGGAAAGAAAGCTCGAGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATCAGAATCCCTGTGGTTaGGGTCCATGTTCACTCCCT | + |
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Preference number: 3 (lower is better) Translates to: VGGKKARELVGEEQRSGHQNPCG*GPCSLP Trigger: AGGGAGTGAACATGGACCCAAACCACAGGGATTCTG...ATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR TCA 72 bp | GAGATGAAGCCACCTACCACCTCTGTCCTCATTCTATaGGATGGGGTCCTCTGTCCAGGAAGACGACATGGC | + |
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Preference number: 3 (lower is better) Translates to: EMKPPTTSVLIL*DGVLCPGRRHG Trigger: GCCATGTCGTCTTCCTGGACAGAGGACCCCATCTCATAGAATGAGGACAGAGGTGGTAGGTGGCTTCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | GGCAGTGGCAGGTGGGCGGAAAGAAAGCTCGAGAGCTaGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: GSGRWAERKLES*WERSKEVDIFF Trigger: AAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CAA 90 bp | CTCTACCTAACTCTAACCCATGCTATCCCCTCTGCCAAGAATTCATGTGTCTTCAGCACCCGGGCAATCTaGCTGTGTGGGATGGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: LYLTLTHAIPSAKNSCVFSTRAI*LCGMAK Trigger: TTTGGCCATCCCACACAGCAAGATTGCCCGGGTGCT...GAAGACACATGAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR GCA 72 bp | GCCTCCAGACCCACTACTCTACCTAACTCTAACCCATaGTATCCCCTCTGCCAAGAATTCATGTGTCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: ASRPTTLPNSNP*YPLCQEFMCLL Trigger: GAGAAGACACATGAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAGTAGTGGGTCTGGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR TCA 72 bp | CAGCAGCTACCCTTCAACATTTTCCTACACAAAGGCTaGAACCCCAGAATATCTCTTGGGCTTGACCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: QQLPFNIFLHKG*NPRISLGLDPA Trigger: AGCTGGGTCAAGCCCAAGAGATATTCTGGGGTTTCAGCCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | GTGGACATTTTCTTTTCACGTCTTCCTGGTCCAGACTaGTGTCCAGGAGTTCTAGGATACCATATCCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: VDIFFSRLPGPD*CPGVLGYHIQG Trigger: TCCCTGGATATGGTATCCTAGAACTCCTGGACACCAGTCTGGACCAGGAAGACGTGAAAAGAAAATGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR-3UTR CAA 90 bp | AGACCCACTACTCTACCTAACTCTAACCCATGCTATCCCCTCTGCCAAGAATTCCAGACTAGAAAACCCTaGTTTTATTCAGCACCCGGG | + |
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Preference number: 3 (lower is better) Translates to: RPTTLPNSNPCYPLCQEFQTRKP*FYSAPG Trigger: CCCGGGTGCTGAATAAAACAAGGGTTTTCTAGTCTG...GAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAGTAGTGGGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CCA 72 bp | GAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCTaGTCCAGACTGGTGTCCAGGAGTTCTAGGATACCA | + |
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Preference number: 3 (lower is better) Translates to: EQRSGHFLFTSS*SRLVSRSSRIP Trigger: TGGTATCCTAGAACTCCTGGACACCAGTCTGGACCAGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR GCA 72 bp | ACTACTCTACCTAACTCTAACCCATGCTATCCCCTCTaGCAAGAATTCATGTGTCTTCTCTCTTTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: TTLPNSNPCYPL*QEFMCLLSLGR Trigger: CCTTCCCAAAGAGAGAAGACACATGAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAGTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CAA 72 bp | GCCGGCAGGGAGGGATGCCCCAGCGGCCAGCTGCCTTaGCCTTGGGCTAGGCGGCTGAGCCTCATGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AGREGCPSGQLP*PWARRLSLMGE Trigger: CTCCCCCATGAGGCTCAGCCGCCTAGCCCAAGGCAAAGGCAGCTGGCCGCTGGGGCATCCCTCCCTGCCGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | CTCTCCCGTTCCTACAGTGATTCTCCAGGGTGGCAGTGGCAGGTGGGCGGAAAGGAGGCGGAGCCCCCGTaGCGTTGCTGGGAGACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSRSYSDSPGWQWQVGGKEAEPP*RCWETE Trigger: CTCCGTCTCCCAGCAACGGCACGGGGGCTCCGCCTC...CTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR GCA 90 bp | TCTCCCGTTCCTACAGTGATTCTCCAGGGTGGCAGTGGCAGGTGGGCGGAAAGAGAGCCCCCGTGCCGTTaGTGGGAGACGGAGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVPTVILQGGSGRWAEREPPCR*WETEVR Trigger: CCGCACCTCCGTCTCCCAGCAACGGCACGGGGGCTC...TCTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGTGGTCCGCCAAACCACAGGGCACAGCAGAGCTCCAGACTAGAAAACCTGAGACGGCCCTGCTaGGCGCCGTTCCGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSCGPPNHRAQQSSRLENLRRPC*APFRSP Trigger: TGGGGAGCGGAACGGCGCCCAGCAGGGCCGTCTCAG...GTTTTCTAGTCTGGAGCTCTGCTGTGCCCTGTGGTTTGGCGGACCACAGCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | TCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTCCCAAGGATGCCCAGCACGAGCCCTGTCCTGGCTaGGCTTGCTGCCCGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SHSKGPLPLSSCPKDAQHEPCPG*ACCPCT Trigger: GGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTC...GTGCTGGGCATCCTTGGGACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | CTAAGGCTGGTGGCCTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTCTGCGGGTAGGAGGATaGCTGGCGATAGGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLVAWKLLESWPSSSYPLRVGG*LAIGGG Trigger: GCCACCACCTATCGCCAGCCATCCTCCTACCCGCAG...AGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAGGCCACCAGCCTTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | CTAAGGCTGGTGGCCTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTGTGGCGTGGCCGGTTaGGGAGAAAGTCCGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLVAWKLLESWPSSSYPCGVAG*GESPLC Trigger: GCACAGCGGACTTTCTCCCCAACCGGCCACGCCACA...AGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAGGCCACCAGCCTTAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | ATGATGGTGCGGGGAGGTGCTGGTGGTGAGCTACAGTCTGAGAAGGAAAGGAACTGCGGGCCCGAGCCATaGCGGTACTGTCCCCGACGG | + |
|
Preference number: 4 (lower is better) Translates to: MMVRGGAGGELQSEKERNCGPEP*RYCPRR Trigger: CCGTCGGGGACAGTACCGGCATGGCTCGGGCCCGCA...GTTCCTTTCCTTCTCAGACTGTAGCTCACCACCAGCACCTCCCCGCACCATCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | CTAGGATACCATATCCAGGGAAGGATAGTGGAGCTCTTCCCTCCTGCACTCCCTCCCCCGTGCCGTTGCTaGGAGACGGAGGTGCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGYHIQGRIVELFPPALPPPCRC*ETEVRA Trigger: GGCCCGCACCTCCGTCTCCCAGCAACGGCACGGGGG...AGGGAGTGCAGGAGGGAAGAGCTCCACTATCCTTCCCTGGATATGGTATCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | CTCTCCCGTTCCTACAGTGATTCTCCAGGGTGGCAGTGGCAGGTGGGCGGAAAGCTCCCAGGTGTGGCGTaGCCGGTTGGGGAGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRSYSDSPGWQWQVGGKLPGVA*PVGEKV Trigger: GACTTTCTCCCCAACCGGCCACGCCACACCTGGGAG...CTTTCCGCCCACCTGCCACTGCCACCCTGGAGAATCACTGTAGGAACGGGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | AGCCTCATGGGGGAGGCTGCCTGGAAGCAGGTCCTGCTTTTCAAGGAGAGACAATCCCACTGGATCAGCTaGCGCCAGCGTCCTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLMGEAAWKQVLLFKERQSHWIS*RQRPGS Trigger: GGACCCAGGACGCTGGCGGCAGCTGATCCAGTGGGA...TTGTCTCTCCTTGAAAAGCAGGACCTGCTTCCAGGCAGCCTCCCCCATGAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR GCA 90 bp | GTGGGCGGAAAGAAAGCTCGAGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATCCGAAGCCGAACGGGTaGCGCGTTTGGCCGCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VGGKKARELVGEEQRSGHPKPNG*RVWPRT Trigger: TGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGG...ATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACACAAAGGACGCTGAGACGGCCCTaGTGGGCGCCGTTCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CWSPGRPAATLQHFPTQRTLRRP*WAPFRS Trigger: GGAGCGGAACGGCGCCCAGCAGGGCCGTCTCAGCGT...CCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | ATGATGGTGCGGGGAGGTGCTGGTGGTGAGCTACAGTCTGAGAAGGAAAGGAACGTCCGAGCCCTGTCCTaGCTGCGCTTGCTGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MMVRGGAGGELQSEKERNVRALS*LRLLPV Trigger: CACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGAC...GTTCCTTTCCTTCTCAGACTGTAGCTCACCACCAGCACCTCCCCGCACCATCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGTGGTCCGCCAAACCACAGGGCACAGCAGAGCTCCAGACTAGAAAACGCTGGCGATAGGTGGTaGCGAAGGCCGAGGCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSCGPPNHRAQQSSRLENAGDRW*RRPRPK Trigger: TTTCGGCCTCGGCCTTCGCCACCACCTATCGCCAGC...GTTTTCTAGTCTGGAGCTCTGCTGTGCCCTGTGGTTTGGCGGACCACAGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR GCA 90 bp | AGACAGGGTCTGGCATCCAGAATCCCTGTGGTTTGGGTCCATGTTCACTCCCTGTGCGCTTGCTGCCCGTaGACCAGGACGCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQGLASRIPVVWVHVHSLCACCP*TRTHRQ Trigger: CTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCA...CAGGGAGTGAACATGGACCCAAACCACAGGGATTCTGGATGCCAGACCCTGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGGTAGACCTTTCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTCTGCCGCCAGCGTCCTaGGTCCGAGCCCTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGKVDLSHSKGPLPLSSCLPPAS*VRALSW Trigger: CCAGGACAGGGCTCGGACCCAGGACGCTGGCGGCAG...ACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGAAAGGTCTACCTTCCCAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACACAAAGGGGGCCTCTCTGGGGCTaGGTAAAAGCCCTGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CWSPGRPAATLQHFPTQRGPLWG*VKALGR Trigger: CCGGCCCAGGGCTTTTACCCAGCCCCAGAGAGGCCC...CCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGTGGCAGTGGCAGGTGGGCGGAAAGAAAGCTCGAGAGCTGGTGGGAGCGCAAGGAGTACAGATaGGCTCTCTGCACGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQGGSGRWAERKLESWWERKEYR*ALCTYV Trigger: CACATACGTGCAGAGAGCCCATCTGTACTCCTTGCG...CTCCCACCAGCTCTCGAGCTTTCTTTCCGCCCACCTGCCACTGCCACCCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR TCA 90 bp | TTTGGGAAGGTAGACCTTTCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTACACACTACCCACGCTaGGACGGCCCTGCTGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FGKVDLSHSKGPLPLSSCTHYPR*DGPAGR Trigger: GCGCCCAGCAGGGCCGTCTCAGCGTGGGTAGTGTGT...ACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGAAAGGTCTACCTTCCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | CTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACAGTTGTCGGGCACCTaGCCGAAGCCGAACGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEVAGVLAVQQLPFNIFLQLSGT*PKPNGC Trigger: GCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTG...TAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | TGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACACAAAGGATGGCTGGCGATAGGTaGTGGCGAAGGCCGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CWSPGRPAATLQHFPTQRMAGDR*WRRPRP Trigger: CGGCCTCGGCCTTCGCCACCACCTATCGCCAGCCAT...CCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR TCA 90 bp | AGTTGTCCCAAGGATGCCCAGCACTGTGAAAGCTGTGGTAAGGGCCCAGGGCTGGGTTCACGTGCACCTTaGGGATGTAGTTCCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SCPKDAQHCESCGKGPGLGSRAP*GCSSQA Trigger: AGCCTGGGAACTACATCCTCAAGGTGCACGTGAACC...CAGCCCTGGGCCCTTACCACAGCTTTCACAGTGCTGGGCATCCTTGGGACAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | TCTGCCAAGAATTCATGTGTCTTCTCTCTTTGGGAAGGTAGACCTTTCCCACTCGCTGGGAGACGGAGGTaGGGGCCCGAGCCATGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAKNSCVFSLWEGRPFPLAGRRR*GPEPCR Trigger: CCGGCATGGCTCGGGCCCGCACCTCCGTCTCCCAGC...GAGTGGGAAAGGTCTACCTTCCCAAAGAGAGAAGACACATGAATTCTTGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | TGGTGTTGTAGAGGAGAAGTAGGTACAAGACAGGGTCTGGCATCCAGAATCCCTGCCGGGTACTCGGGCTaGTCCTCGCCTCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WCCRGEVGTRQGLASRIPAGYSG*SSPPPP Trigger: AGGTGGAGGAGGCGAGGAGCAGCCCGAGTACCCGGC...AGGGATTCTGGATGCCAGACCCTGTCTTGTACCTACTTCTCCTCTACAACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | AGCCTCATGGGGGAGGCTGCCTGGAAGCAGGTCCTGCTTTTCAAGGAGAGACAACACATAGGGCCTCTCTaGGGCTGGGTAAAAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLMGEAAWKQVLLFKERQHIGPL*GWVKAL Trigger: CAGGGCTTTTACCCAGCCCCAGAGAGGCCCTATGTG...TTGTCTCTCCTTGAAAAGCAGGACCTGCTTCCAGGCAGCCTCCCCCATGAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| 3UTR CAA 72 bp | TACAAGACAGGGTCTGGCATCCAGAATCCCTGTGGTTaGGGTCCATGTTCACTCCCTGAGGCCGGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YKTGSGIQNPCG*GPCSLPEAGRE Trigger: CTCCCTGCCGGCCTCAGGGAGTGAACATGGACCCAAACCACAGGGATTCTGGATGCCAGACCCTGTCTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | TCTGCCAAGAATTCATGTGTCTTCTCTCTTTGGGAAGGTAGACCTTTCCCACTCGGGTCCTCAGCTGGCTaGCGGCTCCGGCCAGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAKNSCVFSLWEGRPFPLGSSAG*RLRPEP Trigger: TGGCTCTGGCCGGAGCCGGCAGCCAGCTGAGGACCC...GAGTGGGAAAGGTCTACCTTCCCAAAGAGAGAAGACACATGAATTCTTGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | TGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACACAAAGGGGGCATAGGCTGTGCTaGCCAGGCACTTCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWSPGRPAATLQHFPTQRGHRLC*PGTSPL Trigger: CAGAGGAGAAGTGCCTGGCCAGCACAGCCTATGCCC...CCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR TCA 90 bp | CTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACTGTTCGTAGGTCCGTaGCGCGGGATCGTAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEVAGVLAVQQLPFNIFLLFVGP*RGIVVL Trigger: GAGAACTACGATCCCGCGTCACGGACCTACGAACAG...TAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | CCTTGTTTTATTCAGCACCCGGGCAATCTTGCTGTGTGGGATGGCCAAAATATACCTGGCTGCGCTTGCTaGCCGTGCACCAGGACGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PCFIQHPGNLAVWDGQNIPGCAC*PCTRTH Trigger: GTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGG...TATATTTTGGCCATCCCACACAGCAAGATTGCCCGGGTGCTGAATAAAACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | AGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCTGTGCCACTCCCAGGTGTaGCGTGGCCGGTTGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RAGGRGAKKWTFSFHVFLCHSQV*RGRLGR Trigger: TCTCCCCAACCGGCCACGCCACACCTGGGAGTGGCA...CAGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | TTTGGGAAGGTAGACCTTTCCCACTCTAAGGGTCCTCTGCCTCTGTCCAGTTGTCCTCCAGGCAGAAGCTaGCCTTGTGTCCCTCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FGKVDLSHSKGPLPLSSCPPGRS*PCVPRL Trigger: TAGCCGAGGGACACAAGGCCAGCTTCTGCCTGGAGG...ACAACTGGACAGAGGCAGAGGACCCTTAGAGTGGGAAAGGTCTACCTTCCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | TGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTACACAAAGGCCTCGGCTACCTTCTTaGCCGTGGATGCATCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWSPGRPAATLQHFPTQRPRLPS*PWMHQA Trigger: TGCTTGATGCATCCACGGGCAAGAAGGTAGCCGAGG...CCTTTGTGTAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | CCCAGCTGTGGTCCGCCAAACCACAGGGCACAGCAGAGCTCCAGACTAGAAAACCTGTGTAGTGGATGTTaGATCTCACCACGTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSCGPPNHRAQQSSRLENLCSGC*ISPRCW Trigger: CCAACAACGTGGTGAGATGCAACATCCACTACACAG...GTTTTCTAGTCTGGAGCTCTGCTGTGCCCTGTGGTTTGGCGGACCACAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CCA 90 bp | CTAGGAGATGAAGCCACCTACCACCTCTGTCCTCATTCTATGAGATGGGGTCCTTGTGTCATAGCAGCCTaGACTCAGGCCCTGCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGDEATYHLCPHSMRWGPCVIAA*TQALRV Trigger: CACACGCAGGGCCTGAGTCCAGGCTGCTATGACACA...AGGACCCCATCTCATAGAATGAGGACAGAGGTGGTAGGTGGCTTCATCTCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| 3UTR CAA 72 bp | CCACAGGGCACAGCAGAGCTCCAGACTAGAAAACCCTaGTTTTATTCAGCACCCGGGCAATCTTGCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PQGTAELQTRKP*FYSAPGQSCCV Trigger: CACACAGCAAGATTGCCCGGGTGCTGAATAAAACAAGGGTTTTCTAGTCTGGAGCTCTGCTGTGCCCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR TCA 90 bp | AGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCTGACTCAGAGCCCGAGTTaGGCAAGCTGTACACCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGGRGAKKWTFSFHVFLTQSPS*ASCTPA Trigger: GGCAGGTGTACAGCTTGCTCAACTCGGGCTCTGAGT...CAGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR TCA 90 bp | AGACCCACTACTCTACCTAACTCTAACCCATGCTATCCCCTCTGCCAAGAATTCTGCAGGCATAGCGCTTaGGGTTGCCGAAGTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPTTLPNSNPCYPLCQEFCRHSA*GCRSHR Trigger: CCTGTGACTTCGGCAACCTCAAGCGCTATGCCTGCA...GAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAGTAGTGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR GCA 90 bp | AGACCCACTACTCTACCTAACTCTAACCCATGCTATCCCCTCTGCCAAGAATTCCTGCACGTATGTGGATaGCTGCACGTAGTTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RPTTLPNSNPCYPLCQEFLHVCG*LHVVRV Trigger: GACCCTAACTACGTGCAGGCATCCACATACGTGCAG...GAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAGTAGTGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR TCA 90 bp | CGAGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCTCACCACGTTGTTGGTaGAGTCAGACTCCAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RELVGEEQRSGHFLFTSSSPRCW*SQTPEQ Trigger: TTGTTCTGGAGTCTGACTTCACCAACAACGTGGTGA...GGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR GCA 90 bp | CCTTGTTTTATTCAGCACCCGGGCAATCTTGCTGTGTGGGATGGCCAAAATATACTTCTTGCCCGTGGATaGATCAAGCAGGTCGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCFIQHPGNLAVWDGQNILLARG*IKQVVV Trigger: CACTACGACCTGCTTGATGCATCCACGGGCAAGAAG...TATATTTTGGCCATCCCACACAGCAAGATTGCCCGGGTGCTGAATAAAACAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | CTCTACCTAACTCTAACCCATGCTATCCCCTCTGCCAAGAATTCATGTGTCTTCCTACCTTCTTGCCCGTaGATGCATCAAGCAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LYLTLTHAIPSAKNSCVFLPSCP*MHQAGR Trigger: ACGACCTGCTTGATGCATCCACGGGCAAGAAGGTAG...GAAGACACATGAATTCTTGGCAGAGGGGATAGCATGGGTTAGAGTTAGGTAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CCA 90 bp | CCTTGTTTTATTCAGCACCCGGGCAATCTTGCTGTGTGGGATGGCCAAAATATATGGTTTTTCACTCGCTaGGGGAAGCGCAATAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PCFIQHPGNLAVWDGQNIWFFTR*GKRNST Trigger: AGTGCTATTGCGCTTCCCCCAGCGAGTGAAAAACCA...TATATTTTGGCCATCCCACACAGCAAGATTGCCCGGGTGCTGAATAAAACAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS GCA 90 bp | AGGGCGGGTACCAGCCGAGGCGAGGATCGCCAGCGCCACCGTAGGTaGCACCGGCCCCCGCGGGGGCCTGCGACACGTCGGTGCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RAGTSRGEDRQRHRR*HRPPRGPATRRCWD Trigger: ATCCCAGCACCGACGTGTCGCAGGCCCCCGCGGGGGCCGGTGGCACCTACGGTGGCGCTGGCGATCCTCGCCTCGGCTGGTACCCGCCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CCA 90 bp | GCCGAGGCCGAAACCGAGGAGGAGGCGGAGCCCCCGTGCCGTTGCTaGGAGACGGAGGTGCGGGCCCGAGCCATGCCGGTACTGTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: AEAETEEEAEPPCRC*ETEVRARAMPVLSP Trigger: CGGGGACAGTACCGGCATGGCTCGGGCCCGCACCTCCGTCTCCCAGCAACGGCACGGGGGCTCCGCCTCCTCCTCGGTTTCGGCCTCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CCA 90 bp | CTCCAGTTGTCGGGCACCTGGCCGAAGCCGAACGGGTGCCGCGTTTaGCCGCGCACAGTGTCCGAACCCACGCGTCCGGGCAGGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQLSGTWPKPNGCRV*PRTVSEPTRPGRGR Trigger: CCTGCCCCTGCCCGGACGCGTGGGTTCGGACACTGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | TGCCGCCAGCGTCCTGGGTCCGAGCCCTGTCCTGGCTGCGCTTGCTaGCCGTGCACCAGGACGCACAGGCAGGCACTCCACACCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: CRQRPGSEPCPGCAC*PCTRTHRQALHTRV Trigger: GACCCTGGTGTGGAGTGCCTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTGGCGGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | GCCACCTCTCTCCAGTTGTCGGGCACCTGGCCGAAGCCGAACGGGTaGCGCGTTTGGCCGCGCACAGTGTCCGAACCCACGCGTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATSLQLSGTWPKPNG*RVWPRTVSEPTRPG Trigger: GCCCGGACGCGTGGGTTCGGACACTGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTGGAGAGAGGTGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | AGCCCCCGTGCCGTTGCTGGGAGACGGAGGTGCGGGCCCGAGCCATaGCGGTACTGTCCCCGACGGCCACCTCTCTCCAGTTGTCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRAVAGRRRCGPEP*RYCPRRPPLSSCRA Trigger: TGCCCGACAACTGGAGAGAGGTGGCCGTCGGGGACAGTACCGGCATGGCTCGGGCCCGCACCTCCGTCTCCCAGCAACGGCACGGGGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | CTCCACCGCACGCGGAGGGACGTAGGCCTCCGGTGGCACATTGGCTaGATAGGGCGGGTACCAGCCGAGGCGAGGATCGCCAGCGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LHRTRRDVGLRWHIG*IGRVPAEARIASAT Trigger: GGTGGCGCTGGCGATCCTCGCCTCGGCTGGTACCCGCCCTATGCAGCCAATGTGCCACCGGAGGCCTACGTCCCTCCGCGTGCGGTGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 90 bp | GTGGCTCCACCGCACGCGGAGGGACGTAGGCCTCCGGTGGCACATTaGCTGCATAGGGCGGGTACCAGCCGAGGCGAGGATCGCCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VAPPHAEGRRPPVAH*LHRAGTSRGEDRQR Trigger: GCGCTGGCGATCCTCGCCTCGGCTGGTACCCGCCCTATGCAGCCAATGTGCCACCGGAGGCCTACGTCCCTCCGCGTGCGGTGGAGCCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS TCA 90 bp | GGAGGCCGCGACCATTCTGGTTGGGTCGGTACACACTACCCACGCTaGGACGGCCCTGCTGGGCGCCGTTCCGCTCCCCACCCTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRDHSGWVGTHYPR*DGPAGRRSAPHPGR Trigger: CCTCCCAGGGTGGGGAGCGGAACGGCGCCCAGCAGGGCCGTCTCAGCGTGGGTAGTGTGTACCGACCCAACCAGAATGGTCGCGGCCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | CAGCGTCCTGGGTCCGAGCCCTGTCCTGGCTGCGCTTGCTGCCCGTaGACCAGGACGCACAGGCAGGCACTCCACACCAGGGTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QRPGSEPCPGCACCP*TRTHRQALHTRVLS Trigger: GCTGAGGACCCTGGTGTGGAGTGCCTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | TGGATCAGCTGCCGCCAGCGTCCTGGGTCCGAGCCCTGTCCTGGCTaGGCTTGCTGCCCGTGCACCAGGACGCACAGGCAGGCACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: WISCRQRPGSEPCPG*ACCPCTRTHRQALH Trigger: GTGGAGTGCCTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTGGCGGCAGCTGATCCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 90 bp | CCACTGGATCAGCTGCCGCCAGCGTCCTGGGTCCGAGCCCTGTCCTaGCTGCGCTTGCTGCCCGTGCACCAGGACGCACAGGCAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PLDQLPPASWVRALS*LRLLPVHQDAQAGT Trigger: AGTGCCTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTGGCGGCAGCTGATCCAGTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 90 bp | CCGGTACTGTCCCCGACGGCCACCTCTCTCCAGTTGTCGGGCACCTaGCCGAAGCCGAACGGGTGCCGCGTTTGGCCGCGCACAGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVLSPTATSLQLSGT*PKPNGCRVWPRTVS Trigger: GGACACTGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTGGAGAGAGGTGGCCGTCGGGGACAGTACCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 90 bp | TGGGGGCTGTGGCTCCACCGCACGCGGAGGGACGTAGGCCTCCGGTaGCACATTGGCTGCATAGGGCGGGTACCAGCCGAGGCGAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: WGLWLHRTRRDVGLR*HIGCIGRVPAEARI Trigger: GATCCTCGCCTCGGCTGGTACCCGCCCTATGCAGCCAATGTGCCACCGGAGGCCTACGTCCCTCCGCGTGCGGTGGAGCCACAGCCCCCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | CCATTCTGGTTGGGTCGGTACACACTACCCACGCTGAGACGGCCCTaGTGGGCGCCGTTCCGCTCCCCACCCTGGGAGGGCGCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFWLGRYTLPTLRRP*WAPFRSPPWEGASE Trigger: CTCTGATGCGCCCTCCCAGGGTGGGGAGCGGAACGGCGCCCAGCAGGGCCGTCTCAGCGTGGGTAGTGTGTACCGACCCAACCAGAATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 90 bp | GATAGGGGAACTGCTGCGGGTAGGAGGATGGCTGGCGATAGGTGGTaGCGAAGGCCGAGGCCGAAACCGAGGAGGAGGCGGAGCCCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: DRGTAAGRRMAGDRW*RRPRPKPRRRRSPR Trigger: ACGGGGGCTCCGCCTCCTCCTCGGTTTCGGCCTCGGCCTTCGCCACCACCTATCGCCAGCCATCCTCCTACCCGCAGCAGTTCCCCTATC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | CTAAGGCTGGTGGCCTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTGGAGCCCCCGTGCCGTaGCTGGGAGACGGAGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRLVAWKLLESWPSSSYPGAPVP*LGDGGA Trigger: CGCACCTCCGTCTCCCAGCAACGGCACGGGGGCTCC...AGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAGGCCACCAGCCTTAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CCA 90 bp | TTCTGGTTGGGTCGGTACACACTACCCACGCTGAGACGGCCCTGCTaGGCGCCGTTCCGCTCCCCACCCTGGGAGGGCGCATCAGAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FWLGRYTLPTLRRPC*APFRSPPWEGASEL Trigger: AAGCTCTGATGCGCCCTCCCAGGGTGGGGAGCGGAACGGCGCCCAGCAGGGCCGTCTCAGCGTGGGTAGTGTGTACCGACCCAACCAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 90 bp | TACGAAGGGCGCCTGCGGATAGGGGAACTGCTGCGGGTAGGAGGATaGCTGGCGATAGGTGGTGGCGAAGGCCGAGGCCGAAACCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YEGRLRIGELLRVGG*LAIGGGEGRGRNRG Trigger: TCCTCGGTTTCGGCCTCGGCCTTCGCCACCACCTATCGCCAGCCATCCTCCTACCCGCAGCAGTTCCCCTATCCGCAGGCGCCCTTCGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS-3UTR CAA 90 bp | ATGCCCAGCACTGTGAAAGCTGTGGTAAGGGCCCAGGGCTGCTGCCATTGGTGGCTGTCCTGGCTGCGCTaGCTGCCCGTGCACCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: MPSTVKAVVRAQGCCHWWLSWLR*LPVHQD Trigger: GTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAG...CCACCAATGGCAGCAGCCCTGGGCCCTTACCACAGCTTTCACAGTGCTGGGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS TCA 90 bp | GCCGCCCGCACCACGGTAGTACACGTAGCCCTGTTCGTAGGTCCGTaGCGCGGGATCGTAGTTCTCATACTGGTTTACGAAGGGCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AARTTVVHVALFVGP*RGIVVLILVYEGRL Trigger: CAGGCGCCCTTCGTAAACCAGTATGAGAACTACGATCCCGCGTCACGGACCTACGAACAGGGCTACGTGTACTACCGTGGTGCGGGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | ACACGTCGGTGCTGGGATCAGGGTAGGCCTGCTCGAATCCCGGGGTaGCTTCATTGTACAGGCTGTGCGAGTAACGACGGTCAAGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TRRCWDQGRPARIPG*LHCTGCASNDGQGR Trigger: ACGGCCTTGACCGTCGTTACTCGCACAGCCTGTACAATGAAGGCACCCCGGGATTCGAGCAGGCCTACCCTGATCCCAGCACCGACGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 90 bp | AGCCTCAGGGGCATAGGCTGTGCTGGCCAGGCACTTCTCCTCTGCTaGGCATCGCAAGGAGTACAGATGGGCTCTCTGCACGTATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLRGIGCAGQALLLC*ASQGVQMGSLHVCG Trigger: TCCACATACGTGCAGAGAGCCCATCTGTACTCCTTGCGATGCGCAGCAGAGGAGAAGTGCCTGGCCAGCACAGCCTATGCCCCTGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTGCCACCTCTCTCCAGTaGTCGGGCACCTGGCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WPGSCWSPGRPAATLQHFATSLQ*SGTWPK Trigger: CTTCGGCCAGGTGCCCGACAACTGGAGAGAGGTGGC...AAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | CTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTCCTAAAGGCCGTCGGAAGGTaGGGGCTGAGGCTGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEVAGVLAVQQLPFNIFLKAVGR*GLRLRL Trigger: CAGCCGCAGCCTCAGCCCCAACCTTCCGACGGCCTT...TAGGAAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | AGGGTCCTCTGCCTCTGTCCAGTTGTCCCAAGGATGCCCAGCACTGTGAAAGCTAAAGTCCGCTGTGCCTaGGTTTTTCACTCGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVLCLCPVVPRMPSTVKAKVRCA*VFHSLG Trigger: CCCCAGCGAGTGAAAAACCAAGGCACAGCGGACTTT...AGCTTTCACAGTGCTGGGCATCCTTGGGACAACTGGACAGAGGCAGAGGACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | AGACAGGGTCTGGCATCCAGAATCCCTGTGGTTTGGGTCCATGTTCACTCCCTGTCCAGAACAATGTACTaGGGGTTCACGTGCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RQGLASRIPVVWVHVHSLSRTMY*GFTCTL Trigger: CAAGGTGCACGTGAACCCCAAGTACATTGTTCTGGA...CAGGGAGTGAACATGGACCCAAACCACAGGGATTCTGGATGCCAGACCCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | TGGCCTGGAAGTTGCTGGAGTCCTGGCCGTCCAGCAGCTACCCTTCAACATTTTTTGCATCTCACCACGTaGTTGGTGAAGTCAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: WPGSCWSPGRPAATLQHFLHLTT*LVKSDS Trigger: GGAGTCTGACTTCACCAACAACGTGGTGAGATGCAA...AAAATGTTGAAGGGTAGCTGCTGGACGGCCAGGACTCCAGCAACTTCCAGGCCA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | TGGTGTTGTAGAGGAGAAGTAGGTACAAGACAGGGTCTGGCATCCAGAATCCCTTACTCAGAGCCCGAGTaGAGCAAGCTGTACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WCCRGEVGTRQGLASRIPYSEPE*SKLYTC Trigger: GCAGGTGTACAGCTTGCTCAACTCGGGCTCTGAGTA...AGGGATTCTGGATGCCAGACCCTGTCTTGTACCTACTTCTCCTCTACAACACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | AGGGTCCTCTGCCTCTGTCCAGTTGTCCCAAGGATGCCCAGCACTGTGAAAGCTCAGGACTGGACGATTTaGCAGTTTGTTGTAGAAACG | + |
|
Preference number: 5 (lower is better) Translates to: RVLCLCPVVPRMPSTVKAQDWTI*QFVVET Trigger: CGTTTCTACAACAAACTGCAAAATCGTCCAGTCCTG...AGCTTTCACAGTGCTGGGCATCCTTGGGACAACTGGACAGAGGCAGAGGACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS TCA 90 bp | CGTAGCGACCTGTGTAGTGGATGTTGCATCTCACCACGTTGTTGGTaGAGTCAGACTCCAGAACAATGTACTTGGGGTTCACGTGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: RSDLCSGCCISPRCW*SQTPEQCTWGSRAP Trigger: AGGTGCACGTGAACCCCAAGTACATTGTTCTGGAGTCTGACTTCACCAACAACGTGGTGAGATGCAACATCCACTACACAGGTCGCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS-3UTR CAA 90 bp | AGAGCTGGTGGGAGAGGAGCAAAGAAGTGGACATTTTCTTTTCACGTCTTCCTGCATCTCACCACGTTGTaGGTGAAGTCAGACTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAGGRGAKKWTFSFHVFLHLTTL*VKSDSR Trigger: TCTGGAGTCTGACTTCACCAACAACGTGGTGAGATG...CAGGAAGACGTGAAAAGAAAATGTCCACTTCTTTGCTCCTCTCCCACCAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 72 bp | ACCAGCCGAGGCGAGGATCGCCAGCGCCACCGTAGGTaGCACCGGCCCCCGCGGGGGCCTGCGACACGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: TSRGEDRQRHRR*HRPPRGPATRR Trigger: CCGACGTGTCGCAGGCCCCCGCGGGGGCCGGTGGCACCTACGGTGGCGCTGGCGATCCTCGCCTCGGCTGGT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 72 bp | GCCGAGGCCGAAACCGAGGAGGAGGCGGAGCCCCCGTaGCGTTGCTGGGAGACGGAGGTGCGGGCCCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AEAETEEEAEPP*RCWETEVRARA Trigger: GGCTCGGGCCCGCACCTCCGTCTCCCAGCAACGGCACGGGGGCTCCGCCTCCTCCTCGGTTTCGGCCTCGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 72 bp | TGCCACCGGCCCCCGCGGGGGCCTGCGACACGTCGGTaGTGGGATCAGGGTAGGCCTGCTCGAATCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CHRPPRGPATRR*WDQGRPARIPG Trigger: CCCCGGGATTCGAGCAGGCCTACCCTGATCCCAGCACCGACGTGTCGCAGGCCCCCGCGGGGGCCGGTGGCA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | TCGGGCACCTGGCCGAAGCCGAACGGGTGCCGCGTTTaGCCGCGCACAGTGTCCGAACCCACGCGTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGTWPKPNGCRV*PRTVSEPTRPG Trigger: GCCCGGACGCGTGGGTTCGGACACTGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CAA 72 bp | GTCGGGCACCTGGCCGAAGCCGAACGGGTGCCGCGTTaGGCCGCGCACAGTGTCCGAACCCACGCGTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGHLAEAERVPR*AAHSVRTHASG Trigger: CCCGGACGCGTGGGTTCGGACACTGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 72 bp | TGCCGCCAGCGTCCTGGGTCCGAGCCCTGTCCTGGCTaGGCTTGCTGCCCGTGCACCAGGACGCACAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: CRQRPGSEPCPG*ACCPCTRTHRQ Trigger: CTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTGGCGGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 72 bp | GAAGGGATAGATGACCCCAGCCGAGGCTACAGCCGCTaGCCCCGCGCCCATGCCGCCGCCCGCACCACGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EGIDDPSRGYSR*PRAHAAARTTV Trigger: TACCGTGGTGCGGGCGGCGGCATGGGCGCGGGGGCAGCGGCTGTAGCCTCGGCTGGGGTCATCTATCCCTTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | CAGCTGCCGCCAGCGTCCTGGGTCCGAGCCCTGTCCTaGCTGCGCTTGCTGCCCGTGCACCAGGACGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QLPPASWVRALS*LRLLPVHQDAQ Trigger: CTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTGGCGGCAGCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | TCCCCGACGGCCACCTCTCTCCAGTTGTCGGGCACCTaGCCGAAGCCGAACGGGTGCCGCGTTTGGCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SPTATSLQLSGT*PKPNGCRVWPR Trigger: GCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTGGAGAGAGGTGGCCGTCGGGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | GAAACCGAGGAGGAGGCGGAGCCCCCGTGCCGTTGCTaGGAGACGGAGGTGCGGGCCCGAGCCATGCCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ETEEEAEPPCRC*ETEVRARAMPV Trigger: TACCGGCATGGCTCGGGCCCGCACCTCCGTCTCCCAGCAACGGCACGGGGGCTCCGCCTCCTCCTCGGTTTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CCA 72 bp | GGTCGGTACACACTACCCACGCTGAGACGGCCCTGCTaGGCGCCGTTCCGCTCCCCACCCTGGGAGGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRYTLPTLRRPC*APFRSPPWEGA Trigger: TGCGCCCTCCCAGGGTGGGGAGCGGAACGGCGCCCAGCAGGGCCGTCTCAGCGTGGGTAGTGTGTACCGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CAA 90 bp | CAGCTGCCGCCAGCGTCCTGGGTCCGAGCCCTGTCCTGGCTGCGCTaGCTGCCCGTGCACCAGGACGCACAGGCAGGCACTCCACACCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLPPASWVRALSWLR*LPVHQDAQAGTPHQ Trigger: CTGGTGTGGAGTGCCTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTGGCGGCAGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CAA 90 bp | TCTCCAGTTGTCGGGCACCTGGCCGAAGCCGAACGGGTGCCGCGTTaGGCCGCGCACAGTGTCCGAACCCACGCGTCCGGGCAGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPVVGHLAEAERVPR*AAHSVRTHASGQGQ Trigger: CTGCCCCTGCCCGGACGCGTGGGTTCGGACACTGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTGGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CAA 90 bp | GCCCGAGCCATGCCGGTACTGTCCCCGACGGCCACCTCTCTCCAGTaGTCGGGCACCTGGCCGAAGCCGAACGGGTGCCGCGTTTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARAMPVLSPTATSLQ*SGTWPKPNGCRVWP Trigger: CGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTGGAGAGAGGTGGCCGTCGGGGACAGTACCGGCATGGCTCGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS GCA 72 bp | GGGTCCGAGCCCTGTCCTGGCTGCGCTTGCTGCCCGTaGACCAGGACGCACAGGCAGGCACTCCACACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSEPCPGCACCP*TRTHRQALHTR Trigger: CCTGGTGTGGAGTGCCTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CAA 72 bp | CCAGCGTCCTGGGTCCGAGCCCTGTCCTGGCTGCGCTaGCTGCCCGTGCACCAGGACGCACAGGCAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PASWVRALSWLR*LPVHQDAQAGT Trigger: AGTGCCTGCCTGTGCGTCCTGGTGCACGGGCAGCAAGCGCAGCCAGGACAGGGCTCGGACCCAGGACGCTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS GCA 72 bp | CTCCAGTTGTCGGGCACCTGGCCGAAGCCGAACGGGTaGCGCGTTTGGCCGCGCACAGTGTCCGAACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LQLSGTWPKPNG*RVWPRTVSEPT Trigger: CGTGGGTTCGGACACTGTGCGCGGCCAAACGCGGCACCCGTTCGGCTTCGGCCAGGTGCCCGACAACTGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS GCA 72 bp | ACGCGGAGGGACGTAGGCCTCCGGTGGCACATTGGCTaGATAGGGCGGGTACCAGCCGAGGCGAGGATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: TRRDVGLRWHIG*IGRVPAEARIA Trigger: GGCGATCCTCGCCTCGGCTGGTACCCGCCCTATGCAGCCAATGTGCCACCGGAGGCCTACGTCCCTCCGCGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
||
| CDS CCA 72 bp | CCGCACGCGGAGGGACGTAGGCCTCCGGTGGCACATTaGCTGCATAGGGCGGGTACCAGCCGAGGCGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: PHAEGRRPPVAH*LHRAGTSRGED Trigger: ATCCTCGCCTCGGCTGGTACCCGCCCTATGCAGCCAATGTGCCACCGGAGGCCTACGTCCCTCCGCGTGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | TGGCTCCACCGCACGCGGAGGGACGTAGGCCTCCGGTaGCACATTGGCTGCATAGGGCGGGTACCAGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: WLHRTRRDVGLR*HIGCIGRVPAE Trigger: CTCGGCTGGTACCCGCCCTATGCAGCCAATGTGCCACCGGAGGCCTACGTCCCTCCGCGTGCGGTGGAGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | ACTGCTGCGGGTAGGAGGATGGCTGGCGATAGGTGGTaGCGAAGGCCGAGGCCGAAACCGAGGAGGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TAAGRRMAGDRW*RRPRPKPRRRR Trigger: CCGCCTCCTCCTCGGTTTCGGCCTCGGCCTTCGCCACCACCTATCGCCAGCCATCCTCCTACCCGCAGCAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | CGCCTGCGGATAGGGGAACTGCTGCGGGTAGGAGGATaGCTGGCGATAGGTGGTGGCGAAGGCCGAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: RLRIGELLRVGG*LAIGGGEGRGR Trigger: TCGGCCTCGGCCTTCGCCACCACCTATCGCCAGCCATCCTCCTACCCGCAGCAGTTCCCCTATCCGCAGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS TCA 72 bp | GACCATTCTGGTTGGGTCGGTACACACTACCCACGCTaGGACGGCCCTGCTGGGCGCCGTTCCGCTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: DHSGWVGTHYPR*DGPAGRRSAPH Trigger: GTGGGGAGCGGAACGGCGCCCAGCAGGGCCGTCTCAGCGTGGGTAGTGTGTACCGACCCAACCAGAATGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | CCTGCCAGTAGAACCCTGGAGCTAGTCTCCCCTCGTTaGGGCCCCGCGGGCACGTACTCAGAGCCCGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: PASRTLELVSPR*GPAGTYSEPEL Trigger: CAACTCGGGCTCTGAGTACGTGCCCGCGGGGCCCCAACGAGGGGAGACTAGCTCCAGGGTTCTACTGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | GGAACTGCTGCGGGTAGGAGGATGGCTGGCGATAGGTaGTGGCGAAGGCCGAGGCCGAAACCGAGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GTAAGRRMAGDR*WRRPRPKPRRR Trigger: CCTCCTCCTCGGTTTCGGCCTCGGCCTTCGCCACCACCTATCGCCAGCCATCCTCCTACCCGCAGCAGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | GGAGGGCGCATCAGAGCTTCGCACGGGCAAGTAAGGTaGCTCCAGCACGCGGAATGGGGGCTGTGGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: GGRIRASHGQVR*LQHAEWGLWLH Trigger: GTGGAGCCACAGCCCCCATTCCGCGTGCTGGAGCCACCTTACTTGCCCGTGCGAAGCTCTGATGCGCCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | GGGTCCGGGACTAAGTCAGGGAGGCCGCGACCATTCTaGTTGGGTCGGTACACACTACCCACGCTGAGACGG | + |
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Preference number: 6 (lower is better) Translates to: GSGTKSGRPRPF*LGRYTLPTLRR Trigger: CCGTCTCAGCGTGGGTAGTGTGTACCGACCCAACCAGAATGGTCGCGGCCTCCCTGACTTAGTCCCGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CAA 72 bp | TCCGGGACTAAGTCAGGGAGGCCGCGACCATTCTGGTaGGGTCGGTACACACTACCCACGCTGAGACGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SGTKSGRPRPFW*GRYTLPTLRRP Trigger: GGGCCGTCTCAGCGTGGGTAGTGTGTACCGACCCAACCAGAATGGTCGCGGCCTCCCTGACTTAGTCCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS TCA 72 bp | TCAGGCCCTGCGTGTGAGAGGTGCAGGCATAGCGCTTaGGGTTGCCGAAGTCACAGGTGCTGTCCTCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SGPACERCRHSA*GCRSHRCCPPG Trigger: GCCTGGAGGACAGCACCTGTGACTTCGGCAACCTCAAGCGCTATGCCTGCACCTCTCACACGCAGGGCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS GCA 72 bp | TGCTGGGATCAGGGTAGGCCTGCTCGAATCCCGGGGTaGCTTCATTGTACAGGCTGTGCGAGTAACGACGGT | + |
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Preference number: 6 (lower is better) Translates to: CWDQGRPARIPG*LHCTGCASNDG Trigger: ACCGTCGTTACTCGCACAGCCTGTACAATGAAGGCACCCCGGGATTCGAGCAGGCCTACCCTGATCCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | ATGTTGGTGACAGCTATGCCACTCCCAGGTGTGGCGTaGCCGGTTGGGGAGAAAGTCCGCTGTGCCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: MLVTAMPLPGVA*PVGEKVRCALV Trigger: AACCAAGGCACAGCGGACTTTCTCCCCAACCGGCCACGCCACACCTGGGAGTGGCATAGCTGTCACCAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS CCA 72 bp | GCAGTCAATGTCCGCATTGTATGTGTCATAGCAGCCTaGACTCAGGCCCTGCGTGTGAGAGGTGCAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: AVNVRIVCVIAA*TQALRVRGAGI Trigger: TATGCCTGCACCTCTCACACGCAGGGCCTGAGTCCAGGCTGCTATGACACATACAATGCGGACATTGACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS TCA 72 bp | ACCACGGTAGTACACGTAGCCCTGTTCGTAGGTCCGTaGCGCGGGATCGTAGTTCTCATACTGGTTTACGAA | + |
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Preference number: 6 (lower is better) Translates to: TTVVHVALFVGP*RGIVVLILVYE Trigger: TTCGTAAACCAGTATGAGAACTACGATCCCGCGTCACGGACCTACGAACAGGGCTACGTGTACTACCGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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| CDS TCA 72 bp | CTGTGTAGTGGATGTTGCATCTCACCACGTTGTTGGTaGAGTCAGACTCCAGAACAATGTACTTGGGGTTCA | + |
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Preference number: 6 (lower is better) Translates to: LCSGCCISPRCW*SQTPEQCTWGS Trigger: TGAACCCCAAGTACATTGTTCTGGAGTCTGACTTCACCAACAACGTGGTGAGATGCAACATCCACTACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061799.10 |
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