RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LOXHD1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032818

Ensembl transcript IDs: ENSMUST00000096547.11, ENSMUST00000123410.9, ENSMUST00000148341.9

Found 592 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGAGATGGAGAAGGTAGAGGCCAGGATTCCACAAACTGTCACTTaGAAGGAGCAGCCTCTGGCGGATATGAGACCCCATGTCCACTAC +
Preference number: 1 (lower is better)
Translates to: QEMEKVEARIPQTVT*KEQPLADMRPHVHY
Trigger: GTAGTGGACATGGGGTCTCATATCCGCCAGAGGCTGCTCCTTGCAAGTGACAGTTTGTGGAATCCTGGCCTCTACCTTCTCCATCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
3UTR-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCCACAAACTGTCACTTaGAAGGAGCAGCCTCTGGCG +
Preference number: 2 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYPQTVT*KEQPLA
Trigger: CGCCAGAGGCTGCTCCTTGCAAGTGACAGTTTGTGG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
3UTR TCA 72 bp AAACTGTCACTTGCAAGGAGCAGCCTCTGGCGGATATaGGACCCCATGTCCACTACCCTAGTCCCACTCCCG +
Preference number: 3 (lower is better)
Translates to: KLSLARSSLWRI*DPMSTTLVPLP
Trigger: CGGGAGTGGGACTAGGGTAGTGGACATGGGGTCTCATATCCGCCAGAGGCTGCTCCTTGCAAGTGACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
3UTR-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTCCACAAACTGTCACTaGCAAGGAGCAGCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLSTNCH*QGAASG
Trigger: GCCAGAGGCTGCTCCTTGCAAGTGACAGTTTGTGGA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
3UTR GCA 72 bp GAGAAGGTAGAGGCCAGGATTCCACAAACTGTCACTTaGAAGGAGCAGCCTCTGGCGGATATGAGACCCCAT +
Preference number: 3 (lower is better)
Translates to: EKVEARIPQTVT*KEQPLADMRPH
Trigger: ATGGGGTCTCATATCCGCCAGAGGCTGCTCCTTGCAAGTGACAGTTTGTGGAATCCTGGCCTCTACCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
3UTR-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCCACAAACTGTCACTaGCAAGGAGCAGCCTCTGGC +
Preference number: 3 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSTNCH*QGAASG
Trigger: GCCAGAGGCTGCTCCTTGCAAGTGACAGTTTGTGGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
3UTR CCA 72 bp CAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTaGGTACCACTGTTATTATTACAAGGAAAGAAAGTT +
Preference number: 3 (lower is better)
Translates to: QFSIHTLQQVPT*VPLLLLQGKKV
Trigger: AACTTTCTTTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTCCTCCCTGGCCAGGTaGCCCACACAGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLSSLAR*PTQREA
Trigger: CGCCTCCCTCTGTGTGGGCCACCTGGCCAGGGAGGA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCCACAGAGCCACAGCTaGAGCCTCGCTTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTPQSHS*SLASPG
Trigger: CCCAGGGGAAGCGAGGCTTCAGCTGTGGCTCTGTGG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTAGACTCGGGAAGTGGTaGCGGCGCCACCCACATCCC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTRLGKW*RRHPHP
Trigger: GGGATGTGGGTGGCGCCGGCACCACTTCCCGAGTCT...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACGGGGCACACGGATCTaGACGCTGCCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVRGTRI*TLPRNQ
Trigger: CTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAACCGGGCCATTCCCATaGTCCTCCGCACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVTGPFP*SSAQLG
Trigger: GCCCAACTGTGCGGAGGATCATGGGAATGGCCCGGT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACTCCACCAGCCAGCCTaGGTAGTAGCCGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVLHQPA*VVAAAV
Trigger: GACAGCAGCGGCTACTACTCAGGCTGGCTGGTGGAG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGCCCAGGAACCAGCCTaGATGCATGCCCGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLAQEPA*MHARAV
Trigger: GACAGCACGGGCATGCATGCAGGCTGGTTCCTGGGC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGGGTTATTGTCACCCTaGCCCCCGCCCTCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVGLLSP*PPPSSS
Trigger: AGACGAGGAGGGCGGGGGGCAGGGTGACAATAACCC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTCTCAGGGAGGAGCCTaGGGATGTCCACGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTSQGGA*GCPRGS
Trigger: GCTCCCACGTGGACATCCGCAGGCTCCTCCCTGAGA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGAGACGTTGGCATCGGTaGCGGCCTTGGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLRRWHR*RPWARS
Trigger: GGAACGTGCCCAAGGCCGGCACCGATGCCAACGTCT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTGTTGCCATGCCCGATaGAGACCCGGCTCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLCCHAR*RPGSEG
Trigger: GCCCTCTGAGCCGGGTCTCCATCGGGCATGGCAACA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTGTCCACAAACCAGCTaGGCCCGAAGCCCTCGCCTG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLCPQTS*ARSPRL
Trigger: CAGGCGAGGGCTTCGGGCCCAGCTGGTTTGTGGACA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTAGGAACCAGCCTGCATaGATGCCCGTGCTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTRNQPA*MPVLSC
Trigger: GCACGACAGCACGGGCATGCATGCAGGCTGGTTCCT...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGAAGGTGTACTGCTTaGCTTGGCGGGGCACACGGA +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTGRCTA*LGGAHG
Trigger: TCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLTSLGP*LCCHGR
Trigger: TCGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGTTCATTGTCTTCCTTaGCCCGGGCCAGCCAGCGGT +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLVHCLP*PGPASG
Trigger: ACCGCTGGCTGGCCCGGGGCAAGGAAGACAATGAAC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCCCGAGAATCTGTGCTaGCCCCAGAGACATCCCCAG +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTPENLC*PQRHPQ
Trigger: CTGGGGATGTCTCTGGGGCCAGCACAGATTCTCGGG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTGTACTGCTTGCCTTaGCGGGGCACACGGATCTGG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVYCLP*RGTRIW
Trigger: CCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTAGGACTCGTCCACTaGCAGCAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVGLVH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGCTGCCAGTGGACGAGTCCTAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGCCAGACGTTCTCTCTaGTTTCGCCCCCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVARRSL*FRPRCL
Trigger: CAGGCAACGGGGGCGAAACCAGAGAGAACGTCTGGC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCCAGACGTTCTCTCTaGTTTCGCCCCCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTARRSL*FRPRCL
Trigger: CAGGCAACGGGGGCGAAACCAGAGAGAACGTCTGGC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGGACCTCGTAGGTGTTaGGCTCAGGACCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVGPRRC*AQDQTG
Trigger: GCCAGTCTGGTCCTGAGCCCAACACCTACGAGGTCC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTGGTCAGGTAGACGTTaGCATCGGTGCCGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTWSGRR*HRCRPW
Trigger: CCAAGGCCGGCACCGATGCCAACGTCTACCTGACCA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCCTGCCCTCCAGTATaGGCCAGACGTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSCPPV*ARRSLW
Trigger: CCAGAGAGAACGTCTGGCTCATACTGGAGGGCAGGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCTGCATGCATGCCCGTaGTGTCGTGCCCAATCACCA +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLHACP*CRAQSP
Trigger: TGGTGATTGGGCACGACAGCACGGGCATGCATGCAG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTCCACGTGGGAGCAGTaGCACCCAGGGTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLSTWEQ*HPGFMP
Trigger: AGGCATAAACCCTGGGTGGCACTGCTCCCACGTGGA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCAGGGCTGCTGCAGTTaGTACTGCGGTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLQGCCS*YCGLQC
Trigger: ACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACAGGGCTGCTGCAGTTaGTACTGCGGTCTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVQGCCS*YCGLQC
Trigger: ACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCCAGACCCTCAGTTTaGAGAGGTGTCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTARPSV*RGVPGS
Trigger: TGAGCCTGGGACACCTCTGCAAACTGAGGGTCTGGC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGATCCTCCGCACAGTTaGGCCTTCTGCGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVDPPHS*AFCGHL
Trigger: GAGATGACCGCAGAAGGCCCAACTGTGCGGAGGATC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGATCCTCCGCACAGTTaGGCCTTCTGCGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTDPPHS*AFCGHL
Trigger: GAGATGACCGCAGAAGGCCCAACTGTGCGGAGGATC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTCTCCACCACCTCGCTaGGATACAGCTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLSPPPR*DTAPPP
Trigger: TGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCATCGCCTCGGTCCTTaGCAAGCCAACAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLHRLGP*QANSCS
Trigger: GCTGCAACTGTTGGCTTGCCAAGGACCGAGGCGATG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACAGGGGAAAGTCTGCTaGATGCCAGTAAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVQGKVC*MPVKGH
Trigger: GTGCCCCTTTACTGGCATTCAGCAGACTTTCCCCTG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACTTTGCCGTCATGTCTaGCCCTCACCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVLCRHV*PSPSSL
Trigger: AAGTGAGGAGGGTGAGGGTCAGACATGACGGCAAAG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGGTCACCCTCCACCTTaGTCAGCCAGTTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVGHPPP*SASCCS
Trigger: ACTGCAACAACTGGCTGAGCAAGGTGGAGGGTGACC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCACAGTTGGGCCTTCTaGGGTCATCTCCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTHSWAF*GHLPHD
Trigger: ATCGTGAGGGAGATGACCGCAGAAGGCCCAACTGTG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAGACTCGGGAAGTGGTaGCGGCGCCACCCACATCCC +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKERLGKW*RRHPHP
Trigger: GGGATGTGGGTGGCGCCGGCACCACTTCCCGAGTCT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTTCCCTCTTGTTGGTaGACAGGAACTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVPSCW*TGTSAG
Trigger: CCCGGCAGAAGTTCCTGTGCACCAACAAGAGGGAAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCTTGGCATCTGTCCCTaGCCCAGGAACATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLGICP*PRNIPC
Trigger: ACAGGGAATGTTCCTGGGGCAGGGACAGATGCCAAG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTATTGGCATCCGTGCCTaGCCCCAAGATGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTIGIRA*PQDVTG
Trigger: ACCAGTGACATCTTGGGGGCAGGCACGGATGCCAAT...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLALPKR*GIHLYP
Trigger: TGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGLRMST*EQCHPG
Trigger: CCCTGGGTGGCACTGCTCCCACGTGGACATCCGCAG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAAGTCAGCGCACCACTTaGTGTTGTCATGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSQRTT*CCHGGA
Trigger: AGCTCCGCCATGACAACACCAAGTGGTGCGCTGACT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
3UTR CAA 72 bp GGAGAAGGTAGAGGCCAGGATTCCACAAACTGTCACTaGCAAGGAGCAGCCTCTGGCGGATATGAGACCCCA +
Preference number: 4 (lower is better)
Translates to: GEGRGQDSTNCH*QGAASGGYETP
Trigger: TGGGGTCTCATATCCGCCAGAGGCTGCTCCTTGCAAGTGACAGTTTGTGGAATCCTGGCCTCTACCTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAACTCACTCTTGCTGGTaGGATGGAGCTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVTHSCW*DGAWER
Trigger: TCTCTCCCAAGCTCCATCTCACCAGCAAGAGTGAGT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTCCCGTAAATCTGGATaGAGATGGGCGAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTSRKSG*RWASWC
Trigger: GCACCAACTCGCCCATCTTCATCCAGATTTACGGGA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACCAGCGTCTCCACAGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVPASPQ*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACTGTGGAGACGCTGG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGGTCTCCGTAGATGGTaGTGTAGACCTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLGLRRW*CRPWHL
Trigger: CAGATGCCAAGGTCTACATCACCATCTACGGAGACC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTGGTGCGGTTCTCTaGCTTGCCAAGGTATCGTTC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTVGAVL*LAKVSF
Trigger: GAACGATACCTTGGCAAGTCAGAGAACCGCACCAAC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACATCATCTTCCCCAATaGGCAAGACAAAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVHHLPQ*ARQRHG
Trigger: GCCGTGCCTTTGTCTTGCTCATTGGGGAAGATGATG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCTTGTTGGACTTGTCTaGTTTCTTCAGGGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLLVGLV*FLQGPL
Trigger: GAGCGGCCCCTGAAGAAATCAGACAAGTCCAACAAG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCATCCAGCCAGTTGCTaGAGGGGAAAGTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTHPASC*RGKSAE
Trigger: TTCAGCAGACTTTCCCCTGCAGCAACTGGCTGGATG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCTCAATCAGCCCGTCTaGCTTCTTCTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLLNQPV*LLLIQP
Trigger: TGGCTGGATGAGAAGAAGGCAGACGGGCTGATTGAG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGTCGGTGTTGTTCCTaGAGTTGTAAAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTGRCCS*SCKAAA
Trigger: AGCGGCTGCTTTACAACTGCAGGAACAACACCGACC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGCCCAGGAACCAGCCTaGATGCATGCCCGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGAQEPA*MHARAV
Trigger: GACAGCACGGGCATGCATGCAGGCTGGTTCCTGGGC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGACTTGTCTAGCCACCTaGCGCAGGAGAAGATTGTGG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLTCLAT*RRRRLW
Trigger: CCACAATCTTCTCCTGCGGCAGGTGGCTAGACAAGT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATCCTGCACCACCAGGTaGCGCAGCCACACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKESCTTR*RSHTVS
Trigger: GGACACAGTGTGGCTGCGGCACCTGGTGGTGCAGGA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATGTAGGTTATGGCTGTaGTCTCAGCTCCGCCCACTA +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVCRLWL*SQLRPL
Trigger: TAGTGGGCGGAGCTGAGACCACAGCCATAACCTACA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTGGCATTGCTGTCACTaGGCAGCAACTCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLWHCCH*AATLEP
Trigger: TGGTTCGAGAGTTGCTGCCCAGTGACAGCAATGCCA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTGGCATTGCTGTCACTaGGCAGCAACTCTCGAACCA +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTWHCCH*AATLEP
Trigger: TGGTTCGAGAGTTGCTGCCCAGTGACAGCAATGCCA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAACACTTTGGAACGGCTaGAGAGGAAGAGGACTTCGG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVTLWNG*RGRGLR
Trigger: CCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTGTCATCCTCAGAGGTaGCAAGCCATCGATCACAGG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLCHPQR*QAIDHR
Trigger: CCTGTGATCGATGGCTTGCCACCTCTGAGGATGACA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGCCAGTTGTTGCAGTTaGAGTAGTAGCGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLASCCS*SSSGDV
Trigger: CACATCTCCGCTACTACTTCAACTGCAACAACTGGC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCGGGCCATTCCCATaGTCCTCCGCACAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIITGPFP*SSAQLG
Trigger: GCCCAACTGTGCGGAGGATCATGGGAATGGCCCGGT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACTTTGTCCAGCCACCTaGGGCAGGGGAACTCCACGT +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKELCPAT*GRGTPR
Trigger: ACGTGGAGTTCCCCTGCCTCAGGTGGCTGGACAAAG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACGTTATTCACGTCGGTaGTGTCTACTCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVRYSRR*CLLCPG
Trigger: TCCTGGACAGAGTAGACATCACCGACGTGAATAACG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCAAAGACACGGGAGGTaGCACCATCGCCTCGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYQRHGR*HHRLGP
Trigger: AGGACCGAGGCGATGGTGTCACCTCCCGTGTCTTTG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGCTCTCTCTTGGGAATaGACCGGTCCTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGALSWE*TGPPWP
Trigger: TGGCCAGGGAGGACCGGTTCATTCCCAAGAGAGAGC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTGTGGAAGATATCTGTaGGGCCTCTGTCAAACACGC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTCGRYL*GLCQTR
Trigger: GCGTGTTTGACAGAGGCCGCACAGATATCTTCCACA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCCAGAGCCAGGGTTCTaGCTATCATGCCACGCCCGA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYPEPGF*LSCHAR
Trigger: TCGGGCGTGGCATGATAGGCAGAACCCTGGCTCTGG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACCAGAGCCAGGGTTCTaGCTATCATGCCACGCCCGA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEPEPGF*LSCHAR
Trigger: TCGGGCGTGGCATGATAGGCAGAACCCTGGCTCTGG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGGAACCAGCCTGCATaGATGCCCGTGCTGTCGTGC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGRNQPA*MPVLSC
Trigger: GCACGACAGCACGGGCATGCATGCAGGCTGGTTCCT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACACGGATCTGGACGCTaGCCAGGAACCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGHGSGR*PGTSLH
Trigger: ATGCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGGGTTATTGTCACCCTaGCCCCCGCCCTCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIGLLSP*PPPSSS
Trigger: AGACGAGGAGGGCGGGGGGCAGGGTGACAATAACCC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTGGCATCTGTGCCTaGATTCTTCTTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTVGICA*ILLVPS
Trigger: ACTGGGGACAAGAAGAATGCAGGCACAGATGCCAAC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAACCAGCCTGGGGCCTTaGCTGTGTTGTCATGGCCGA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKETSLGP*LCCHGR
Trigger: TCGGCCATGACAACACAGGCAAGGCCCCAGGCTGGT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGTCGTCCTCATTCTTTaGCAGCCAGCGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGVVLIL*QPAATG
Trigger: CCCTGTGGCCGCTGGCTGGCAAAGAATGAGGACGAC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGTCGTCCTCATTCTTTaGCAGCCAGCGGCCACAGGG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYVVLIL*QPAATG
Trigger: CCCTGTGGCCGCTGGCTGGCAAAGAATGAGGACGAC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTTCTCAGGGAGGAGCCTaGGGATGTCCACGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIISQGGA*GCPRGS
Trigger: GCTCCCACGTGGACATCCGCAGGCTCCTCCCTGAGA...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGTCAGGTTCTCCTCCTaGACCACCAGGTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIVRFSS*TTRCRS
Trigger: GCTGCGGCACCTGGTGGTGCAGGAGGAGAACCTGAC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGTCCAGGTACCAGCTaGCATTCAAGCCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTGPGTS*HSSLCY
Trigger: ATAACACAGGCTTGAATGCCAGCTGGTACCTGGACC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACCCGAGAATCTGTGCTaGCCCCAGAGACATCCCCAG +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGPENLC*PQRHPQ
Trigger: CTGGGGATGTCTCTGGGGCCAGCACAGATTCTCGGG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCGAAGACTCGGGAAGTaGTGCCGGCGCCACCCACAT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIRRLGK*CRRHPH
Trigger: ATGTGGGTGGCGCCGGCACCACTTCCCGAGTCTTCG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCTGTTCCCTCTTGTTaGTGCACAGGAACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSVPSC*CTGTSA
Trigger: GGCAGAAGTTCCTGTGCACCAACAAGAGGGAACAGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGGACCAGTTCTCGGATaGTCTTCTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLGPVLG*SSCHPQ
Trigger: CTGAGGATGACAAGAAGACCATCCGAGAACTGGTCC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTTCCCGCTCAAACCTaGCCTTCTTCTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVPAQT*PSSCPT
Trigger: AGTTGGACAAGAAGAAGGCCAGGTTTGAGCGGGAAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACCACAAGGAACTCCTTaGATCTGTTCTTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVPQGTP*ICSSCP
Trigger: AGGGCAGGAAGAACAGATCCAAGGAGTTCCTTGTGG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGGCTCTGGATCTTACTaGCGAAGCTCTCTGTCGTTT +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLGSGSY*RSSLSF
Trigger: AAACGACAGAGAGCTTCGCCAGTAAGATCCAGAGCC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCTTTGTCCAGCCACCTaGGGCAGGGGAACTCCACGT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIILCPAT*GRGTPR
Trigger: ACGTGGAGTTCCCCTGCCTCAGGTGGCTGGACAAAG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACTTGTTCCAGTTGGCTaGCTGCTTCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGLVPVG*LLQGQG
Trigger: ACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTCCTGCCCTCCAGTATaGGCCAGACGTTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSCPPV*ARRSLW
Trigger: CCAGAGAGAACGTCTGGCTCATACTGGAGGGCAGGA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAATTGGCATCAGTTCCTaGACCTTCAAGTTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVIGISS*TFKFPC
Trigger: ACAGGGGAACTTGAAGGTGCAGGAACTGATGCCAAT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGATTGGCATCAGTTCCTaGACCTTCAAGTTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLIGISS*TFKFPC
Trigger: ACAGGGGAACTTGAAGGTGCAGGAACTGATGCCAAT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACCAGGTACCAGCCACTaGCAGAGCCTTTGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGPGTSH*QSLCRH
Trigger: ATGACGGCAAAGGCTCTGGCAGTGGCTGGTACCTGG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACACACCCGAGAATCTGTaGTGGCCCCAGAGACATCCC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYTPENL*WPQRHP
Trigger: GGGATGTCTCTGGGGCCAGCACAGATTCTCGGGTGT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATCCACGTGGGAGCAGTaGCACCCAGGGTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKESTWEQ*HPGFMP
Trigger: AGGCATAAACCCTGGGTGGCACTGCTCCCACGTGGA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTTCCCTGTGAAGATCTaGACCGAGTACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTFPVKI*TEYSTM
Trigger: CATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTCCCTGTGAAGATCTaGACCGAGTACAGCACAATG +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLFPVKI*TEYSTM
Trigger: CATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAGTCAGCAGGGCTGCTaGAGTTGCTACTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSQQGC*SCYCGL
Trigger: GAGACCGCAGTAGCAACTGCAGCAGCCCTGCTGACT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATTCCAGTTGGCTGACTaGTTCAGGGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEFQLAD*FRARVP
Trigger: TGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGACGTCGAACTTGTACTaGACAATCACCTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLTSNLY*TITSCI
Trigger: GATGCAGGAGGTGATTGTGCAGTACAAGTTCGACGT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTATCTGTCTGGCCCTaGTCAAACTTGTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVSVWP*SNLLDL
Trigger: CAAGTCCAACAAGTTTGAGCAGGGCCAGACAGATAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGTGTACTGCTTGCCTTaGCGGGGCACACGGATCTGG +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIVYCLP*RGTRIW
Trigger: CCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACAC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTCTCCACCACCTCGCTaGGATACAGCTCCACCTCCA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSPPPR*DTAPPP
Trigger: TGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGTAGGACTCGTCCACTaGCAGCAGCTCCCTGGACAG +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIVGLVH*QQLPGQ
Trigger: CTGTCCAGGGAGCTGCTGCCAGTGGACGAGTCCTAC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCCACGTCTGCCATCTTaGAACTCAGGGCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYPRLPS*NSGRSP
Trigger: GGGAGATCGCCCTGAGTTCCAAGATGGCAGACGTGG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACACCTCCTGCATCCCTaGCCCATACTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGHLLHP*PILLFL
Trigger: GAGGAAGAGGAGTATGGGCCAGGGATGCAGGAGGTG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTACTCTTCACCGTAGATaGTCAGGTAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTTLHRR*SGRRWH
Trigger: ATGCCAACGTCTACCTGACCATCTACGGTGAAGAGT...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCGGAGCGTCCAGTGTaGACTTGTCTTCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPERPV*TCLQLP
Trigger: AGGGAGCTGAAGACAAGTTCACACTGGACGCTCCGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCTTTGCCGTCATGTCTaGCCCTCACCCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYLCRHV*PSPSSL
Trigger: AAGTGAGGAGGGTGAGGGTCAGACATGACGGCAAAG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTGCCATAGAGGGTCATaGAGATATTGGAGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLCHRGS*RYWSQY
Trigger: GTACTGACTCCAATATCTTCATGACCCTCTATGGCA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTGTCTCTCTGGATTTTaGCATCATCTTCATCCAGCG +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTCLSGF*HHLHPA
Trigger: CGCTGGATGAAGATGATGGCAAAATCCAGAGAGACA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATGTCTCTCTGGATTTTaGCATCATCTTCATCCAGCG +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVCLSGF*HHLHPA
Trigger: CGCTGGATGAAGATGATGGCAAAATCCAGAGAGACA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTATGCCCGTGCTGTCGTaGCCAATCACCAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIMPVLS*PITSLL
Trigger: CAACAGGCTGGTGATTGGGCACGACAGCACGGGCAT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCTCGTCTGAAGCTCTaGGTGGAAGAGGTCCCTGAC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPRLKL*VEEVPD
Trigger: GTCAGGGACCTCTTCCACGCAGAGCTTCAGACGAGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGAAGTCAAGGTTTCTGTaGCATCTTTCTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLKSRFL*HLSQGG
Trigger: TCCTCCCTGAGAAAGATGGCACAGAAACCTTGACTT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACTTGGCATCTGTCCCTaGCCCAGGAACATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKELGICP*PRNIPC
Trigger: ACAGGGAATGTTCCTGGGGCAGGGACAGATGCCAAG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCTCAAACTTGTTGGTaGGGTTCTCTGACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSQTCW*GSLTCQ
Trigger: TTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTAGTCAGCAGGGCTGCTaGAGTTGCTACTGCGGTCTC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIISQQGC*SCYCGL
Trigger: GAGACCGCAGTAGCAACTGCAGCAGCCCTGCTGACT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAGAAGTCAGCAGGGCTaGTGCAGTTGCTACTGCGGT +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYRSQQG*CSCYCG
Trigger: ACCGCAGTAGCAACTGCAGCAGCCCTGCTGACTTCT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCCCTCTCGAAGAGGTTaGGCATTTTCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTPSRRG*AFSVSV
Trigger: AACTGAAACAGAAAATGCGCAACCTCTTCGAGAGGG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAGAAGCGGTCTGTACTaGCCCTCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYRSGLY*PSRRGC
Trigger: GCAACCTCTTCGAGAGGGGCAGTACAGACCGCTTCT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGAAGCGGTCTGTACTaGCCCTCTCGAAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGRSGLY*PSRRGC
Trigger: GCAACCTCTTCGAGAGGGGCAGTACAGACCGCTTCT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACTCTTGCTGGTGAGATaGAGCTTGGGAGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGLLLVR*SLGESP
Trigger: TGGGCTCTCTCCCAAGCTCCATCTCACCAGCAAGAG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTATTTGTTTCCTCTTaGCATGTCCATGGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVFVSS*HVHGVE
Trigger: TTCGACCCCATGGACATGCCAAGAGGAAACAAATAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAGACGCCCATCAGCTTaGTTCTTATCCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYRRPSA*FLSSHR
Trigger: CCGGTGGCTGGATAAGAACCAAGCTGATGGGCGTCT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAGACGCCCATCAGCTTaGTTCTTATCCAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKERRPSA*FLSSHR
Trigger: CCGGTGGCTGGATAAGAACCAAGCTGATGGGCGTCT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTGCCTGTGTTGTCATaGCCGATCCTAACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLLPVLS*PILTFQ
Trigger: TTGGAAAGTTAGGATCGGCCATGACAACACAGGCAA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGTCTACAAACCAGCCTaGGGCCTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYVYKPA*GLACVV
Trigger: GACAACACAGGCAAGGCCCCAGGCTGGTTTGTAGAC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGTCTACAAACCAGCCTaGGGCCTTGCCTGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGVYKPA*GLACVV
Trigger: GACAACACAGGCAAGGCCCCAGGCTGGTTTGTAGAC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCTTTCTCAAACTTGTTaGTGCGGTTCTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLSQTC*CGSLTC
Trigger: GCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCTTTCTCAAACTTGTTaGTGCGGTTCTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLLSQTC*CGSLTC
Trigger: GCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACATTTGCGCCAAAGATaGTCACAAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVHLRQR*SQRRWH
Trigger: ATGCCAACGTCTTTGTGACCATCTTTGGCGCAAATG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCATTTGCGCCAAAGATaGTCACAAAGACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLHLRQR*SQRRWH
Trigger: ATGCCAACGTCTTTGTGACCATCTTTGGCGCAAATG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTCCACGGCTTCCAGCTaGAAAATGTCCTTGGACCCC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSTASS*KMSLDP
Trigger: GGGGTCCAAGGACATTTTCCAGCTGGAAGCCGTGGA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACTCACTCTTGCTGGTaGGATGGAGCTTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGTHSCW*DGAWER
Trigger: TCTCTCCCAAGCTCCATCTCACCAGCAAGAGTGAGT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATGTTGTGGCCCACATTaGTCTTCATCAGCTGCCCCA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKECCGPH*SSSAAP
Trigger: TGGGGCAGCTGATGAAGATCAATGTGGGCCACAACA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCAGGGGAAAGTCTGCTaGATGCCAGTAAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIQGKVC*MPVKGH
Trigger: GTGCCCCTTTACTGGCATTCAGCAGACTTTCCCCTG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATCCCGTAAATCTGGATaGAGATGGGCGAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKESRKSG*RWASWC
Trigger: GCACCAACTCGCCCATCTTCATCCAGATTTACGGGA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCCAGCGTCTCCACAGTaGAGATTTCAATGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYPASPQ*RFQCCP
Trigger: GGGACAGCATTGAAATCTTCACTGTGGAGACGCTGG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGGTCTCCGTAGATGGTaGTGTAGACCTTGGCATCTG +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEGLRRW*CRPWHL
Trigger: CAGATGCCAAGGTCTACATCACCATCTACGGAGACC...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGTTGGTGCGGTTCTCTaGCTTGCCAAGGTATCGTTC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGVGAVL*LAKVSF
Trigger: GAACGATACCTTGGCAAGTCAGAGAACCGCACCAAC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAATTGGCATCTGTCCCTaGACCACGAACATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEIGICP*TTNIPC
Trigger: ACAGGGGATGTTCGTGGTGCAGGGACAGATGCCAAT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATTGATCTTCATCAGCTaGCCCAAATCCGGAGCGTCC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGLIFIS*PKSGAS
Trigger: GGACGCTCCGGATTTGGGGCAGCTGATGAAGATCAA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACATCCAGCCAGTTGCTaGAGGGGAAAGTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEHPASC*RGKSAE
Trigger: TTCAGCAGACTTTCCCCTGCAGCAACTGGCTGGATG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTCTCATCCAGCCAGTTaGTGCAGGGGAAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSHPAS*CRGKSA
Trigger: AGCAGACTTTCCCCTGCAGCAACTGGCTGGATGAGA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCTCATCCAGCCAGTTaGTGCAGGGGAAAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSHPAS*CRGKSA
Trigger: AGCAGACTTTCCCCTGCAGCAACTGGCTGGATGAGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCACAGTTGGGCCTTCTaGGGTCATCTCCCTCACGAT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIHSWAF*GHLPHD
Trigger: ATCGTGAGGGAGATGACCGCAGAAGGCCCAACTGTG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTGCTGCAGTTGCTACTaGGGTCTCCAGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYCCSCY*GLQCTP
Trigger: AGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATGCTGCAGTTGCTACTaGGGTCTCCAGTGTACTCCT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGCCSCY*GLQCTP
Trigger: AGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGCCCGTGTCCCCATTTaGGCCAAAGATGGTCACAAA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEARVPI*AKDGHK
Trigger: TTTGTGACCATCTTTGGCGCAAATGGGGACACGGGC...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTTCCTTCTTCAGCAGCTaGCGCAGCTTGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIISFFSS*RSLSFS
Trigger: GGAGAAGGACAAGCTGCGGCAGCTGCTGAAGAAGGA...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCCTCCTCATCATCGCTaGCTTTCTTCTTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLPPHHR*LSSFSS
Trigger: AGAAGAAAAAGAAGAAAGGCAGCGATGATGAGGAGG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTGTAGGTTATGGCTGTaGTCTCAGCTCCGCCCACTA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYCRLWL*SQLRPL
Trigger: TAGTGGGCGGAGCTGAGACCACAGCCATAACCTACA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCTTCTCAATGATGCCTaGCTTGAACCACTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLLNDA*LEPLVV
Trigger: AACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACACACTTTGGAACGGCTaGAGAGGAAGAGGACTTCGG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYTLWNG*RGRGLR
Trigger: CCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCA +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIALPKR*GIHLYP
Trigger: TGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATGTCATCCTCAGAGGTaGCAAGCCATCGATCACAGG +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKECHPQR*QAIDHR
Trigger: CCTGTGATCGATGGCTTGCCACCTCTGAGGATGACA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTAGTCAGCGCACCACTTaGTGTTGTCATGGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIISQRTT*CCHGGA
Trigger: AGCTCCGCCATGACAACACCAAGTGGTGCGCTGACT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGGGGAGGCTCCATCGTaGCCCAGCTCTATTTTCTTG +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIGEAPS*PSSIFL
Trigger: CAAGAAAATAGAGCTGGGCCACGATGGAGCCTCCCC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR CCA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCTCCATAGTAGAACATaGTTAGGTCTCCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLHSRT*LGLLCS
Trigger: TGAACACAGGAGACCTAACCATGTTCTACTATGGAG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTGGCACCAGGCTCTaGATCTTACTGGCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIITGTRL*ILLAKL
Trigger: GAGCTTCGCCAGTAAGATCCAGAGCCTGGTGCCAGT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGACCTCGTACTTGACTaGCACCAGGCTCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGDLVLD*HQALDL
Trigger: AAGATCCAGAGCCTGGTGCCAGTCAAGTACGAGGTC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGCCAGTTGTTGCAGTTaGAGTAGTAGCGGAGATGTG +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGASCCS*SSSGDV
Trigger: CACATCTCCGCTACTACTTCAACTGCAACAACTGGC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACGTTATTCACGTCGGTaGTGTCTACTCTGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKERYSRR*CLLCPG
Trigger: TCCTGGACAGAGTAGACATCACCGACGTGAATAACG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACACTGGTGTAGAGGGTaGTCTCATAGGGGACAAATG +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGHWCRG*SHRGQM
Trigger: CATTTGTCCCCTATGAGATCACCCTCTACACCAGTG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCACTGGTGTAGAGGGTaGTCTCATAGGGGACAAATG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYHWCRG*SHRGQM
Trigger: CATTTGTCCCCTATGAGATCACCCTCTACACCAGTG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCAGGAACATTCCCTGTaGAGATCTGCACCGAGTACA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYQEHSL*RSAPST
Trigger: TGTACTCGGTGCAGATCTTCACAGGGAATGTTCCTG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAATCAGCATCTGTCCCTaGACCAATCACGTCACCAGT +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEISICP*TNHVTS
Trigger: ACTGGTGACGTGATTGGTGCAGGGACAGATGCTGAT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATGTGGAAGATATCTGTaGGGCCTCTGTCAAACACGC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGCGRYL*GLCQTR
Trigger: GCGTGTTTGACAGAGGCCGCACAGATATCTTCCACA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCTCAATCAGCCCGTCTaGCTTCTTCTCATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIILNQPV*LLLIQP
Trigger: TGGCTGGATGAGAAGAAGGCAGACGGGCTGATTGAG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAGAGGACTTCGGTCTTaGCTTCTTCCCCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKERGLRS*LLPRRS
Trigger: AGATCTACGGGGAAGAAGGCAAGACCGAAGTCCTCT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGTTGGCATCTGTGCCTaGATTCTTCTTGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGVGICA*ILLVPS
Trigger: ACTGGGGACAAGAAGAATGCAGGCACAGATGCCAAC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAGACGTTGGCATCTGTaGCTGCATTCTTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKERRWHL*LHSSCP
Trigger: GGGACAAGAAGAATGCAGGCACAGATGCCAACGTCT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTTGCGGTTCTCTGACTTaGCAAGGTATCGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIICGSLT*QGIVPL
Trigger: CAGGGGAACGATACCTTGGCAAGTCAGAGAACCGCA...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGCCAGATGCGGTTGGTaGATTCATCATCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYARCGW*IHHLPQ
Trigger: TTGGGGAAGATGATGAATGCACCAACCGCATCTGGC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGCCAGATGCGGTTGGTaGATTCATCATCTTCCCCAA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEARCGW*IHHLPQ
Trigger: TTGGGGAAGATGATGAATGCACCAACCGCATCTGGC...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATTCTTCTTGTCCAACTaGACCTCTTCTGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGFFLSN*TSSVLP
Trigger: CGGGAGCACAGAAGAGGTGCAGTTGGACAAGAAGAA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTTCTTCTTGTCCAACTaGACCTCTTCTGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYFFLSN*TSSVLP
Trigger: CGGGAGCACAGAAGAGGTGCAGTTGGACAAGAAGAA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACATCCCTTTGTTGTCGTaGCAGACCCTCAGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYIPLLS*QTLSLQ
Trigger: CTGCAAACTGAGGGTCTGGCACGACAACAAAGGGAT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGCCCGTGTCCCCATTTaGGCCAAAGATGGTCACAAA +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIARVPI*AKDGHK
Trigger: TTTGTGACCATCTTTGGCGCAAATGGGGACACGGGC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCCCGATCAAACACTTTaGAACGGCTGGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYPDQTL*NGWRGR
Trigger: TCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACAAATTTGTCACTGTTaGTTTTGGAGGACTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVQICHC*FWRTSG
Trigger: TCCTGAAGTCCTCCAAAACCAACAGTGACAAATTTG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATCTGTTCCCTCTTGTTaGTGCACAGGAACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKESVPSC*CTGTSA
Trigger: GGCAGAAGTTCCTGTGCACCAACAAGAGGGAACAGA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGTTCCCGCTCAAACCTaGCCTTCTTCTTGTCCAACT +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYVPAQT*PSSCPT
Trigger: AGTTGGACAAGAAGAAGGCCAGGTTTGAGCGGGAAC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCAAACTTGTTCCAGTTaGCTGACTGCTTCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYQTCSS*LTASGP
Trigger: TGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTTGTCACCTTCGCTCTTaGACAGCCAGCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIICHLRS*TASSHT
Trigger: AGTGTGACTGCTGGCTGTCCAAGAGCGAAGGTGACA...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTCCTCCCTGGCCAGGTaGCCCACACAGAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRSSLAR*PTQREA
Trigger: CGCCTCCCTCTGTGTGGGCCACCTGGCCAGGGAGGA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGACCTCGTACTTGACTaGCACCAGGCTCTGGATCTT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIDLVLD*HQALDL
Trigger: AAGATCCAGAGCCTGGTGCCAGTCAAGTACGAGGTC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACCCCAGTCTTCACGCTaGTGTGATAACGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGPQSSR*CDNGNS
Trigger: AGAATTTCCGTTATCACATCAGCGTGAAGACTGGGG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCAGGAACATTCCCTGTaGAGATCTGCACCGAGTACA +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIQEHSL*RSAPST
Trigger: TGTACTCGGTGCAGATCTTCACAGGGAATGTTCCTG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCCACAGAGCCACAGCTaGAGCCTCGCTTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRPQSHS*SLASPG
Trigger: CCCAGGGGAAGCGAGGCTTCAGCTGTGGCTCTGTGG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCAATGGCATAGATGGTaGAGGTATCTGTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIQWHRW*RYLSGP
Trigger: AGGGCCAGACAGATACCTTCACCATCTATGCCATTG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGTCATCTTTTCTAAATaGCACCCAGAGCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGVIFSK*HPEPGF
Trigger: GAACCCTGGCTCTGGGTGGCATTTAGAAAAGATGAC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTAGAGGACTTCGGTCTTaGCTTCTTCCCCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIRGLRS*LLPRRS
Trigger: AGATCTACGGGGAAGAAGGCAAGACCGAAGTCCTCT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTGGCAAGCCAACAGTTaGAGCGTAATGTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYWQANS*SVMCTW
Trigger: CCAAGTACACATTACGCTGCAACTGTTGGCTTGCCA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCATTGTCATCTTCATTaGCATCCAGCCAGCGATTGC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYHCHLH*HPASDC
Trigger: GCAATCGCTGGCTGGATGCCAATGAAGATGACAATG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGGCAGAGATAGACATTaGCATCAGTTCCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGGRDRH*HQFLHL
Trigger: AAGGTGCAGGAACTGATGCCAATGTCTATCTCTGCC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCGGGGCACACGGATCTaGACGCTGCCCAGGAACCAG +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRRGTRI*TLPRNQ
Trigger: CTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCCGATCAAACACTTTaGAACGGCTGGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPDQTL*NGWRGR
Trigger: TCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGGACCAGTTCTCGGATaGTCTTCTTGTCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIGPVLG*SSCHPQ
Trigger: CTGAGGATGACAAGAAGACCATCCGAGAACTGGTCC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCACAAGGAACTCCTTaGATCTGTTCTTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPQGTP*ICSSCP
Trigger: AGGGCAGGAAGAACAGATCCAAGGAGTTCCTTGTGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGTGAAGGTATCTGTCTaGCCCTGCTCAAACTTGTTG +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYVKVSV*PCSNLL
Trigger: CAACAAGTTTGAGCAGGGCCAGACAGATACCTTCAC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATGCCATAGAGGGTCATaGAGATATTGGAGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKECHRGS*RYWSQY
Trigger: GTACTGACTCCAATATCTTCATGACCCTCTATGGCA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTCTCCTCTCCATCAATaGCTGCACATATCTCACACA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSPLHQ*LHISHT
Trigger: TGTGTGAGATATGTGCAGTCATTGATGGAGAGGAGA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCTCCTCTCCATCAATaGCTGCACATATCTCACACA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSPLHQ*LHISHT
Trigger: TGTGTGAGATATGTGCAGTCATTGATGGAGAGGAGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGCATGTCAGAAAAGTTaGAGGTGTCTGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYACQKS*RCLCCS
Trigger: GGAACAACACAGACACCTTCAACTTTTCTGACATGC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCTCCACCAGCCAGCCTaGGTAGTAGCCGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRLHQPA*VVAAAV
Trigger: GACAGCAGCGGCTACTACTCAGGCTGGCTGGTGGAG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGTCATCTTTTCTAAATaGCACCCAGAGCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIVIFSK*HPEPGF
Trigger: GAACCCTGGCTCTGGGTGGCATTTAGAAAAGATGAC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAAGTCAAGGTTTCTGTaGCATCTTTCTCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEKSRFL*HLSQGG
Trigger: TCCTCCCTGAGAAAGATGGCACAGAAACCTTGACTT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCTCAAACTTGTTGGTaGGGTTCTCTGACTTGCCAA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSQTCW*GSLTCQ
Trigger: TTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACCCTCTCGAAGAGGTTaGGCATTTTCTGTTTCAGTT +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEPSRRG*AFSVSV
Trigger: AACTGAAACAGAAAATGCGCAACCTCTTCGAGAGGG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATTCTTCTTCTTTCTCTaGAGCTTAGCCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGFFFFL*SLAFSL
Trigger: GAGGCTGAAGGCTAAGCTGCAGAGAAAGAAGAAGAA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGTATTTGTTTCCTCTTaGCATGTCCATGGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEVFVSS*HVHGVE
Trigger: TTCGACCCCATGGACATGCCAAGAGGAAACAAATAC...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCATTGTCATCTTCATTaGCATCCAGCCAGCGATTGC +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIHCHLH*HPASDC
Trigger: GCAATCGCTGGCTGGATGCCAATGAAGATGACAATG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATTGCCTGTGTTGTCATaGCCGATCCTAACTTTCCAA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGLPVLS*PILTFQ
Trigger: TTGGAAAGTTAGGATCGGCCATGACAACACAGGCAA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACAATGGCATAGATGGTaGAGGTATCTGTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGQWHRW*RYLSGK
Trigger: TTTTCCAGACAGATACCTTCACCATCTATGCCATTG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCACGGATCTGGACGCTaGCCAGGAACCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRHGSGR*PGTSLH
Trigger: ATGCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCTTCTCAATGATGCCTaGCTTGAACCACTTGTTGTT +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYLLNDA*LEPLVV
Trigger: AACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCTCCAGGAACCACTCTaGCCGGCTACCCATCCCATC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRLQEPL*PATHPI
Trigger: GATGGGATGGGTAGCCGGCCAGAGTGGTTCCTGGAG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGAAAGGCTCTCTGTCTaGAAGAATTTTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGERLSV*KNFPQG
Trigger: TCCTTGTGGAAAATTCTTCCAGACAGAGAGCCTTTC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGAAAGGCTCTCTGTCTaGAAGAATTTTCCACAAGGA +
Preference number: 4 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEERLSV*KNFPQG
Trigger: TCCTTGTGGAAAATTCTTCCAGACAGAGAGCCTTTC...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCTTGTTCCAGTTGGCTaGCTGCTTCAGGGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRLVPVG*LLQGQG
Trigger: ACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCCAGGTACCAGCCACTaGCAGAGCCTTTGCCGTCAT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRPGTSH*QSLCRH
Trigger: ATGACGGCAAAGGCTCTGGCAGTGGCTGGTACCTGG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGACACCCGAGAATCTGTaGTGGCCCCAGAGACATCCC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRTPENL*WPQRHP
Trigger: GGGATGTCTCTGGGGCCAGCACAGATTCTCGGGTGT...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGATGCCCGTGCTGTCGTaGCCAATCACCAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRMPVLS*PITSLL
Trigger: CAACAGGCTGGTGATTGGGCACGACAGCACGGGCAT...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCTGCATGCATGCCCGTaGTGTCGTGCCCAATCACCA +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRLHACP*CRAQSP
Trigger: TGGTGATTGGGCACGACAGCACGGGCATGCATGCAG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTTCCAGTTGGCTGACTaGTTCAGGGCCAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRFQLAD*FRARVP
Trigger: TGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGCCAGACCCTCAGTTTaGAGAGGTGTCCCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRARPSV*RGVPGS
Trigger: TGAGCCTGGGACACCTCTGCAAACTGAGGGTCTGGC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCTCTTGGCATGTCCATaGGGTCGAAGCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRLLACP*GRSWPA
Trigger: TGCTGGCCAGCTTCGACCCCATGGACATGCCAAGAG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCAAATTTGTCACTGTTaGTTTTGGAGGACTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYQICHC*FWRTSG
Trigger: TCCTGAAGTCCTCCAAAACCAACAGTGACAAATTTG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCTCCATAGTAGAACATaGTTAGGTCTCCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: IFHPHPAASPNLGTTVIILHSRT*LGLLCS
Trigger: TGAACACAGGAGACCTAACCATGTTCTACTATGGAG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACCTGCTCAAACTTGTTaGACTTGTCTGATTTCTTCA +
Preference number: 4 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGPAQTC*TCLISS
Trigger: TGAAGAAATCAGACAAGTCCAACAAGTTTGAGCAGG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGGTCACCCTCCACCTTaGTCAGCCAGTTGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRGHPPP*SASCCS
Trigger: ACTGCAACAACTGGCTGAGCAAGGTGGAGGGTGACC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGATTGGCATCCGTGCCTaGCCCCAAGATGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRIGIRA*PQDVTG
Trigger: ACCAGTGACATCTTGGGGGCAGGCACGGATGCCAAT...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGACTGGCACCAGGCTCTaGATCTTACTGGCGAAGCTC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRTGTRL*ILLAKL
Trigger: GAGCTTCGCCAGTAAGATCCAGAGCCTGGTGCCAGT...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCATCATCTTCCCCAATaGGCAAGACAAAGGCACGGC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRHHLPQ*ARQRHG
Trigger: GCCGTGCCTTTGTCTTGCTCATTGGGGAAGATGATG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGGTCGGTGTTGTTCCTaGAGTTGTAAAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRGRCCS*SCKAAA
Trigger: AGCGGCTGCTTTACAACTGCAGGAACAACACCGACC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTGCGGTTCTCTGACTTaGCAAGGTATCGTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRCGSLT*QGIVPL
Trigger: CAGGGGAACGATACCTTGGCAAGTCAGAGAACCGCA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGACTTGTCTAGCCACCTaGCGCAGGAGAAGATTGTGG +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRTCLAT*RRRRLW
Trigger: CCACAATCTTCTCCTGCGGCAGGTGGCTAGACAAGT...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR GCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGAGACGTTGGCATCTGTaGCTGCATTCTTCTTGTCCC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRRRWHL*LHSSCP
Trigger: GGGACAAGAAGAATGCAGGCACAGATGCCAACGTCT...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGGTCCAGGTACCAGCTaGCATTCAAGCCTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRGPGTS*HSSLCY
Trigger: ATAACACAGGCTTGAATGCCAGCTGGTACCTGGACC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGTAGTAGCGGAGATGTaGCCTCTTCATGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRVVAEM*PLHVSH
Trigger: GTGACTGACATGAAGAGGCCACATCTCCGCTACTAC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGGCTCTGGATCTTACTaGCGAAGCTCTCTGTCGTTT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRGSGSY*RSSLSF
Trigger: AAACGACAGAGAGCTTCGCCAGTAAGATCCAGAGCC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR TCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCCCCAGTCTTCACGCTaGTGTGATAACGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRPQSSR*CDNGNS
Trigger: AGAATTTCCGTTATCACATCAGCGTGAAGACTGGGG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGGCAGAGATAGACATTaGCATCAGTTCCTGCACCTT +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRGRDRH*HQFLHL
Trigger: AAGGTGCAGGAACTGATGCCAATGTCTATCTCTGCC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGTGAAGGTATCTGTCTaGAAAATGTCCTTGGACCCC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRVKVSV*KMSLDP
Trigger: GGGGTCCAAGGACATTTTCCAGACAGATACCTTCAC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR TCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGCATGTCAGAAAAGTTaGAGGTGTCTGTGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRACQKS*RCLCCS
Trigger: GGAACAACACAGACACCTTCAACTTTTCTGACATGC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCAATATTCACAACCATaGCGTCCAGGAGGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRQYSQP*RPGGQR
Trigger: TCTTTGACCTCCTGGACGCCATGGTTGTGAATATTG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR TCA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGGTTCAAAGTAGTCTTTaGGGTTGTTGTCGGAGACAA +
Preference number: 4 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRVQSSL*GCCRRQ
Trigger: TTGTCTCCGACAACAACCTCAAAGACTACTTTGAAC...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS GCA 90 bp GCCTTGGCGGGGCACACGGATCTGGACGCTGCCCAGGAACCAGCCTaGATGCATGCCCGTGCTGTCGTGCCCAATCACCAGCCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: ALAGHTDLDAAQEPA*MHARAVVPNHQPVD
Trigger: ATCAACAGGCTGGTGATTGGGCACGACAGCACGGGCATGCATGCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp GGAAGGTGTACTGCTTGCCTTGGCGGGGCACACGGATCTGGACGCTaGCCAGGAACCAGCCTGCATGCATGCCCGTGCTGTCGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: GRCTACLGGAHGSGR*PGTSLHACPCCRAQ
Trigger: TTGGGCACGACAGCACGGGCATGCATGCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp TTAGCCGGGAAGGTGTACTGCTTGCCTTGGCGGGGCACACGGATCTaGACGCTGCCCAGGAACCAGCCTGCATGCATGCCCGTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: LAGKVYCLPWRGTRI*TLPRNQPACMPVLS
Trigger: CGACAGCACGGGCATGCATGCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp ACCACCTTCTCACAGTACCAGCCGCGGTTGACGCCTATGTTGCCATaGCCGATGGAGACCCGGCTCAGAGGGCTAAGGAGGACGGCCAGG +
Preference number: 5 (lower is better)
Translates to: TTFSQYQPRLTPMLP*PMETRLRGLRRTAR
Trigger: CCTGGCCGTCCTCCTTAGCCCTCTGAGCCGGGTCTCCATCGGGCATGGCAACATAGGCGTCAACCGCGGCTGGTACTGTGAGAAGGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 90 bp GGCATGTCCATGGGGTCGAAGCTGGCCAGCAGGTCCCGGCACCACTaGCGGTCACCCTCCACCTTGCTCAGCCAGTTGTTGCAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GMSMGSKLASRSRHH*RSPSTLLSQLLQLK
Trigger: CTTCAACTGCAACAACTGGCTGAGCAAGGTGGAGGGTGACCGTCAGTGGTGCCGGGACCTGCTGGCCAGCTTCGACCCCATGGACATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp TTCTTATCCAGCCACCGGTTAGCCGGGAAGGTGTACTGCTTGCCTTaGCGGGGCACACGGATCTGGACGCTGCCCAGGAACCAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: FLSSHRLAGKVYCLP*RGTRIWTLPRNQPA
Trigger: TGCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCTGGATAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TCAGCTTGGTTCTTATCCAGCCACCGGTTAGCCGGGAAGGTGTACTaGTTGCCTTGGCGGGGCACACGGATCTGGACGCTGCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SAWFLSSHRLAGKVY*LPWRGTRIWTLPRN
Trigger: GTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCTGGATAAGAACCAAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp ATGGAGACCCGGCTCAGAGGGCTAAGGAGGACGGCCAGGTCGATGTaGAAGATATCTGTGCGGCCTCTGTCAAACACGCCACCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: METRLRGLRRTARSM*KISVRPLSNTPPSR
Trigger: CCTGGAGGGTGGCGTGTTTGACAGAGGCCGCACAGATATCTTCCACATCGACCTGGCCGTCCTCCTTAGCCCTCTGAGCCGGGTCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp CGGTCTTGCCTTCTTCCCCGTAGATCTGCACGAAGACTCGGGAAGTaGTGCCGGCGCCACCCACATCCCCCGTCCAAATCTCAATCTCGT +
Preference number: 5 (lower is better)
Translates to: RSCLLPRRSARRLGK*CRRHPHPPSKSQSR
Trigger: ACGAGATTGAGATTTGGACGGGGGATGTGGGTGGCGCCGGCACCACTTCCCGAGTCTTCGTGCAGATCTACGGGGAAGAAGGCAAGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGGGAAGGTGTACTGCTaGCCTTGGCGGGGCACACGG +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLGKVYC*PWRGTR
Trigger: CCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACCATCGCCCCGAGACTaGTCTAGCCACCTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVPSPRD*SSHLPQ
Trigger: CTGCGGCAGGTGGCTAGACAAGTCTCGGGGCGATGG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS TCA 90 bp ATGGTGTGTAAAGCCTCGTCTGAAGCTCTGCGTGGAAGAGGTCCCTaGCGATGCTGCCGTCGTCCTCATTCTTTGCCAGCCAGCGGCCAC +
Preference number: 5 (lower is better)
Translates to: MVCKASSEALRGRGP*RCCRRPHSLPASGH
Trigger: GTGGCCGCTGGCTGGCAAAGAATGAGGACGACGGCAGCATCGTCAGGGACCTCTTCCACGCAGAGCTTCAGACGAGGCTTTACACACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp GCCAGCCTGAGTAGTAGCCGCTGCTGTCGTGTTCCAGCCGAACCTTaGGCAGCTCTCCCAACTCTAACGTCTCCAGAAAGAAGCGGTCTG +
Preference number: 5 (lower is better)
Translates to: ASLSSSRCCRVPAEP*AALPTLTSPERSGL
Trigger: CAGACCGCTTCTTTCTGGAGACGTTAGAGTTGGGAGAGCTGCGCAAGGTTCGGCTGGAACACGACAGCAGCGGCTACTACTCAGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS GCA 90 bp TCTTCCTTGCCCCGGGCCAGCCAGCGGTTAACGTCGAACTTGTACTaGACAATCACCTCCTGCATCCCTGGCCCATACTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSLPRASQRLTSNLY*TITSCIPGPYSSSS
Trigger: GGAGGAAGAGGAGTATGGGCCAGGGATGCAGGAGGTGATTGTGCAGTACAAGTTCGACGTTAACCGCTGGCTGGCCCGGGGCAAGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CCA 90 bp ACCACCTCGCTGGGATACAGCTCCACCTCCAGACGCCCATCAGCTTaGTTCTTATCCAGCCACCGGTTAGCCGGGAAGGTGTACTGCTTG +
Preference number: 5 (lower is better)
Translates to: TTSLGYSSTSRRPSA*FLSSHRLAGKVYCL
Trigger: CAAGCAGTACACCTTCCCGGCTAACCGGTGGCTGGATAAGAACCAAGCTGATGGGCGTCTGGAGGTGGAGCTGTATCCCAGCGAGGTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp TCCTTGGCAAGCCAACAGTTGCAGCGTAATGTGTACTTGGTACCCTaGGTAGGCACCGCCAAGCACAGCTCCTCCACCAGCCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SLASQQLQRNVYLVP*VGTAKHSSSTSQQL
Trigger: GAGCTGCTGGCTGGTGGAGGAGCTGTGCTTGGCGGTGCCTACCCAGGGTACCAAGTACACATTACGCTGCAACTGTTGGCTTGCCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CCA 90 bp CAGACAAGCTCTCTCTTGGGAATGAACCGGTCCTCCCTGGCCAGGTaGCCCACACAGAGGGAGGCGATGTCTCCCAAGAAGATGCTGTCA +
Preference number: 5 (lower is better)
Translates to: QTSSLLGMNRSSLAR*PTQREAMSPKKMLS
Trigger: TGACAGCATCTTCTTGGGAGACATCGCCTCCCTCTGTGTGGGCCACCTGGCCAGGGAGGACCGGTTCATTCCCAAGAGAGAGCTTGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGGTGTACTGCTTGCCTaGGCGGGGCACACGGATCTG +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVGVLLA*AGHTDL
Trigger: CAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACGTCGTCCTCATTCTTaGCCAGCCAGCGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVRRPHS*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCAAAGAATGAGGACGACG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCAGGGCTGCTGCAGTaGCTACTGCGGTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTAGLLQ*LLRSPV
Trigger: CACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTGC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS TCA 90 bp CAAGTTCCCCTGTGCATACAGTCACACGATACCGGGCCATTCCCATaGTCCTCCGCACAGTTGGGCCTTCTGCGGTCATCTCCCTCACGA +
Preference number: 5 (lower is better)
Translates to: QVPLCIQSHDTGPFP*SSAQLGLLRSSPSR
Trigger: TCGTGAGGGAGATGACCGCAGAAGGCCCAACTGTGCGGAGGATCATGGGAATGGCCCGGTATCGTGTGACTGTATGCACAGGGGAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TCTTGCCTTCTTCCCCGTAGATCTGCACGAAGACTCGGGAAGTGGTaGCGGCGCCACCCACATCCCCCGTCCAAATCTCAATCTCGTAGT +
Preference number: 5 (lower is better)
Translates to: SCLLPRRSARRLGKW*RRHPHPPSKSQSRS
Trigger: ACTACGAGATTGAGATTTGGACGGGGGATGTGGGTGGCGCCGGCACCACTTCCCGAGTCTTCGTGCAGATCTACGGGGAAGAAGGCAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp AGGGGAAAGTCAAGGTTTCTGTGCCATCTTTCTCAGGGAGGAGCCTaGGGATGTCCACGTGGGAGCAGTGCCACCCAGGGTTTATGCCTG +
Preference number: 5 (lower is better)
Translates to: RGKSRFLCHLSQGGA*GCPRGSSATQGLCL
Trigger: CAGGCATAAACCCTGGGTGGCACTGCTCCCACGTGGACATCCGCAGGCTCCTCCCTGAGAAAGATGGCACAGAAACCTTGACTTTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TCAGGGCGATCTCCCAGAAGTCAGCAGGGCTGCTGCAGTTGCTACTaGGGTCTCCAGTGTACTCCTTCTCATAGAAGAGCCTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SGRSPRSQQGCCSCY*GLQCTPSHRRASPA
Trigger: GGCTGGAGAGGCTCTTCTATGAGAAGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TGGCCAGGTGGCCCACACAGAGGGAGGCGATGTCTCCCAAGAAGATaGTGTCAAACTCAAAGGTGTCTGTGGTCCCCTTCCGAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: WPGGPHRGRRCLPRR*CQTQRCLWSPSERL
Trigger: GAGCCTTTCGGAAGGGGACCACAGACACCTTTGAGTTTGACAGCATCTTCTTGGGAGACATCGCCTCCCTCTGTGTGGGCCACCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp GCCAGCCAGCGGTTAACGTCGAACTTGTACTGCACAATCACCTCCTaGATCCCTGGCCCATACTCCTCTTCCTCCTCCTCCTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: ASQRLTSNLYCTITS*IPGPYSSSSSSSSD
Trigger: GTCAGAGGAGGAGGAGGAGGAAGAGGAGTATGGGCCAGGGATGCAGGAGGTGATTGTGCAGTACAAGTTCGACGTTAACCGCTGGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CCA 90 bp GGGAAGCCGACTTCCTCTCGAAGAACAGTTTCTGTTCCCTCTTGTTaGTGCACAGGAACTTCTGCCGGGTGCACACGGCGTCACAGCCGT +
Preference number: 5 (lower is better)
Translates to: GKPTSSRRTVSVPSC*CTGTSAGCTRRHSR
Trigger: ACGGCTGTGACGCCGTGTGCACCCGGCAGAAGTTCCTGTGCACCAACAAGAGGGAACAGAAACTGTTCTTCGAGAGGAAGTCGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp GTTTCTGTGCCATCTTTCTCAGGGAGGAGCCTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGGTTTATGCCTGTGTTGTCATGGCCA +
Preference number: 5 (lower is better)
Translates to: VSVPSFSGRSLRMST*EQCHPGFMPVLSWP
Trigger: TGGCCATGACAACACAGGCATAAACCCTGGGTGGCACTGCTCCCACGTGGACATCCGCAGGCTCCTCCCTGAGAAAGATGGCACAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCGGTTGACGCCTATGTaGCCATGCCCGATGGAGACC +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLRLTPM*PCPMET
Trigger: GGTCTCCATCGGGCATGGCAACATAGGCGTCAACCG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACAGGGGAACTCCACGTaGTCACTCTCGGGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVQGNST*SLSGCP
Trigger: GGGACAACCCGAGAGTGACAACGTGGAGTTCCCCTG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTCAGTCAGCGCACCACTaGGTGTTGTCATGGCGGAGC +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTQSAHH*VLSWRS
Trigger: GCTCCGCCATGACAACACCAAGTGGTGCGCTGACTG...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGCGCACCACTTGGTGTaGTCATGGCGGAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVAHHLV*SWRSLI
Trigger: GATCAAGCTCCGCCATGACAACACCAAGTGGTGCGC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCCACGTCTGCCATCTaGGAACTCAGGGCGATCTCC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSTSAI*ELRAIS
Trigger: GGAGATCGCCCTGAGTTCCAAGATGGCAGACGTGGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACTGTCACCTTCGCTCTaGGACAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVLSPSL*DSQQSH
Trigger: GTGTGACTGCTGGCTGTCCAAGAGCGAAGGTGACAG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAACGATGACCTCGTACTaGACTGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVTMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCAGTCAAGTACGAGGTCATCGT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS TCA 90 bp ATCGCTGGCATGGGAAGTAGTACGTGGTCTCGTTATTCACGTCGGTaGTGTCTACTCTGTCCAGGAACCAGCCTGGCCTGTTGCCCGTGT +
Preference number: 5 (lower is better)
Translates to: IAGMGSSTWSRYSRR*CLLCPGTSLACCPC
Trigger: ACACGGGCAACAGGCCAGGCTGGTTCCTGGACAGAGTAGACATCACCGACGTGAATAACGAGACCACGTACTACTTCCCATGCCAGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 90 bp CAATATTCACAACCATGGCGTCCAGGAGGTCAAAGACACGGGAGGTaGCACCATCGCCTCGGTCCTTGGCAAGCCAACAGTTGCAGCGTA +
Preference number: 5 (lower is better)
Translates to: QYSQPWRPGGQRHGR*HHRLGPWQANSCSV
Trigger: TACGCTGCAACTGTTGGCTTGCCAAGGACCGAGGCGATGGTGTCACCTCCCGTGTCTTTGACCTCCTGGACGCCATGGTTGTGAATATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS GCA 90 bp CCTCAGAGACACCATCTCATAGAGCTGCCTCTCAATCAGCCCGTCTaGCTTCTTCTCATCCAGCCAGTTGCTGCAGGGGAAAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: PQRHHLIELPLNQPV*LLLIQPVAAGESLL
Trigger: CAGCAGACTTTCCCCTGCAGCAACTGGCTGGATGAGAAGAAGGCAGACGGGCTGATTGAGAGGCAGCTCTATGAGATGGTGTCTCTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp CGTCGTCCTCATTCTTTGCCAGCCAGCGGCCACAGGGAAAAGTCATaGACTTCCCAAGAGATGGGGCATCCACCTCTACCCAGTCTACAA +
Preference number: 5 (lower is better)
Translates to: RRPHSLPASGHREKS*TSQEMGHPPLPSLQ
Trigger: TTGTAGACTGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGCATGACTTTTCCCTGTGGCCGCTGGCTGGCAAAGAATGAGGACGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TGGAACTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTGCTGCAGTTaGTACTGCGGTCTCCAGTGTACTCCTTCTCATAGAAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: WNSGRSPRSQQGCCS*YCGLQCTPSHRRAS
Trigger: AGAGGCTCTTCTATGAGAAGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp CTGCCATCTTGGAACTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTaGTGCAGTTGCTACTGCGGTCTCCAGTGTACTCCTTCTCATAGA +
Preference number: 5 (lower is better)
Translates to: LPSWNSGRSPRSQQG*CSCYCGLQCTPSHR
Trigger: TCTATGAGAAGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGTTCCAAGATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp CGCTCCTGGTTCGTAGCCTGTCGTCACGATGACCTCGTACTTGACTaGCACCAGGCTCTGGATCTTACTGGCGAAGCTCTCTGTCGTTTT +
Preference number: 5 (lower is better)
Translates to: RSWFVACRHDDLVLD*HQALDLTGEALCRF
Trigger: AAAACGACAGAGAGCTTCGCCAGTAAGATCCAGAGCCTGGTGCCAGTCAAGTACGAGGTCATCGTGACGACAGGCTACGAACCAGGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp CGGCTTCCAGCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTTaGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTGCCTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RLPAGKCPWTPDQTL*NGWRGRGLRSCLLP
Trigger: GGGAAGAAGGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGCTGGAAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTATGAGGCCCACGTTATaGGTTCGCACCCGGAATACG +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTMRPTL*VRTRNT
Trigger: CGTATTCCGGGTGCGAACCAATAACGTGGGCCTCAT...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTCTTGAGCGTGGCATaGCTGTCACTGGGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLFLSVA*LSLGSN
Trigger: GTTGCTGCCCAGTGACAGCAATGCCACGCTCAAGAA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTGGCGAATCCGAATCTaGGTAAGAGCCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTWRIRI*VRAPRS
Trigger: TGACCTGGGGGCTCTTACCAAGATTCGGATTCGCCA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATGGCGAATCCGAATCTaGGTAAGAGCCCCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVWRIRI*VRAPRS
Trigger: TGACCTGGGGGCTCTTACCAAGATTCGGATTCGCCA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTAGCAGCTGCCGCAGCTaGTCCTTCTCCTTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTSSCRS*SFSFFF
Trigger: GAAGAAGAAGGAGAAGGACAAGCTGCGGCAGCTGCT...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCCACAACAAGTTCATaGTCTTCCTTGCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSTTSS*SSLPRA
Trigger: GGCCCGGGGCAAGGAAGACAATGAACTTGTTGTGGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS TCA 90 bp GAAGGTGTCAGCCGTTCCTTTCTCAAACTTGTTGGTGCGGTTCTCTaGCTTGCCAAGGTATCGTTCCCCTGTGTCCCCGAGGTCTCCGTA +
Preference number: 5 (lower is better)
Translates to: EGVSRSFLKLVGAVL*LAKVSFPCVPEVSV
Trigger: TACGGAGACCTCGGGGACACAGGGGAACGATACCTTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAACGGCTGACACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp GATCAAACACTTTGGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTaGCTTCTTCCCCGTAGATCTGCACGAAGACTCGGGAAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: DQTLWNGWRGRGLRS*LLPRRSARRLGKWC
Trigger: GCACCACTTCCCGAGTCTTCGTGCAGATCTACGGGGAAGAAGGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TGTCAGCCGTTCCTTTCTCAAACTTGTTGGTGCGGTTCTCTGACTTaGCAAGGTATCGTTCCCCTGTGTCCCCGAGGTCTCCGTAGATGG +
Preference number: 5 (lower is better)
Translates to: CQPFLSQTCWCGSLT*QGIVPLCPRGLRRW
Trigger: CCATCTACGGAGACCTCGGGGACACAGGGGAACGATACCTTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAACGGCTGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp CCATCTTGGAACTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTGCTaGAGTTGCTACTGCGGTCTCCAGTGTACTCCTTCTCATAGAAGA +
Preference number: 5 (lower is better)
Translates to: PSWNSGRSPRSQQGC*SCYCGLQCTPSHRR
Trigger: TCTTCTATGAGAAGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGTTCCAAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp AACATAGTCAACCATAGGTCCTGTCACCGTGTCGATGTCCACGTCTaGCATCTTGGAACTCAGGGCGATCTCCCAGAAGTCAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: NIVNHRSCHRVDVHV*HLGTQGDLPEVSRA
Trigger: AGCCCTGCTGACTTCTGGGAGATCGCCCTGAGTTCCAAGATGGCAGACGTGGACATCGACACGGTGACAGGACCTATGGTTGACTATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp AATCACGTCACCAGTGTACACCTTGATCTCGTATTTGTTTCCTCTTaGCATGTCCATGGGGTCGAAGCTGGCCAGCAGGTCCCGGCACCA +
Preference number: 5 (lower is better)
Translates to: NHVTSVHLDLVFVSS*HVHGVEAGQQVPAP
Trigger: TGGTGCCGGGACCTGCTGGCCAGCTTCGACCCCATGGACATGCCAAGAGGAAACAAATACGAGATCAAGGTGTACACTGGTGACGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp TACAGTCACACGATACCGGGCCATTCCCATGATCCTCCGCACAGTTaGGCCTTCTGCGGTCATCTCCCTCACGATCTCATTGTCATCTTC +
Preference number: 5 (lower is better)
Translates to: YSHTIPGHSHDPPHS*AFCGHLPHDLIVIF
Trigger: GAAGATGACAATGAGATCGTGAGGGAGATGACCGCAGAAGGCCCAACTGTGCGGAGGATCATGGGAATGGCCCGGTATCGTGTGACTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp TGTAGATCTCACCCACGTCCACGGCTTCCAGCTGGAAAATGTCCTTaGACCCCCGATCAAACACTTTGGAACGGCTGGAGAGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: CRSHPRPRLPAGKCP*TPDQTLWNGWRGRG
Trigger: TCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGCTGGAAGCCGTGGACGTGGGTGAGATCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGATGAAGATGGGCGAGTaGGTGCCGGCTTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLMKMGE*VPAFFR
Trigger: TCTGAAGAAAGCCGGCACCAACTCGCCCATCTTCAT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGGTGTACTGCTTGCCTaGGCGGGGCACACGGATCTG +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGGVLLA*AGHTDL
Trigger: CAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGGGAAGGTGTACTGCTaGCCTTGGCGGGGCACACGG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIGKVYC*PWRGTR
Trigger: CCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCG +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGNQPGA*PVLSWP
Trigger: CGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAACCAGCCTGGGGCCTaGCCTGTGTTGTCATGGCCG +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKENQPGA*PVLSWP
Trigger: CGGCCATGACAACACAGGCAAGGCCCCAGGCTGGTT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTCTCGGATGGTCTTCTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLSRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAGAAGACCATCCGAGA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCAAACTTGTTCCAGTaGGCTGACTGCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSNLFQ*ADCFRA
Trigger: GGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACTGGTTTCGCCCCCGTaGCCTGTTTCTATGACAATC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVLVSPP*PVSMTI
Trigger: GATTGTCATAGAAACAGGCAACGGGGGCGAAACCAG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTCCACAAGGAACTCCTaGGATCTGTTCTTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTSTRNS*DLFFLP
Trigger: GGGCAGGAAGAACAGATCCAAGGAGTTCCTTGTGGA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTGATGGTGATCGTCTaGACGTGCCAGACAAGCTCT +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVMVIV*TCQTSS
Trigger: AGAGCTTGTCTGGCACGTCAAGACGATCACCATCAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTACTTCCTCTTCCGCTaGAGGGGGATGAGGCAATCA +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTYFLFR*RGMRQS
Trigger: TGATTGCCTCATCCCCCTCAAGCGGAAGAGGAAGTA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAACTCCAGTACTAGTGTaGGTGACCTCCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVTPVLV*VTSTFS
Trigger: GGAGAAGGTGGAGGTCACCAACACTAGTACTGGAGT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGACTCCAGTACTAGTGTaGGTGACCTCCACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLTPVLV*VTSTFS
Trigger: GGAGAAGGTGGAGGTCACCAACACTAGTACTGGAGT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS TCA 90 bp TCTGCCTTCTTCTCATCCAGCCAGTTGCTGCAGGGGAAAGTCTGCTaGATGCCAGTAAAGGGGCACAGGATCACCACCTTCTCACAGTAC +
Preference number: 5 (lower is better)
Translates to: SAFFSSSQLLQGKVC*MPVKGHRITTFSQY
Trigger: GTACTGTGAGAAGGTGGTGATCCTGTGCCCCTTTACTGGCATTCAGCAGACTTTCCCCTGCAGCAACTGGCTGGATGAGAAGAAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 90 bp GTTGAAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTTGGCTaGCTGCTTCAGGGCCAGGGTCCCACTGTCTCCATTTTCCCCGAA +
Preference number: 5 (lower is better)
Translates to: VEGVCVVPLKLVPVG*LLQGQGPTVSIFPE
Trigger: TTCGGGGAAAATGGAGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp GATCTCATAGGGGACAAATGGTGTGTAAAGCCTCGTCTGAAGCTCTaGGTGGAAGAGGTCCCTGACGATGCTGCCGTCGTCCTCATTCTT +
Preference number: 5 (lower is better)
Translates to: DLIGDKWCVKPRLKL*VEEVPDDAAVVLIL
Trigger: AAGAATGAGGACGACGGCAGCATCGTCAGGGACCTCTTCCACGCAGAGCTTCAGACGAGGCTTTACACACCATTTGTCCCCTATGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp AAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTTGGCTGACTaGTTCAGGGCCAGGGTCCCACTGTCTCCATTTTCCCCGAAGATG +
Preference number: 5 (lower is better)
Translates to: KVSVLFRSNLFQLAD*FRARVPLSPFSPKM
Trigger: CATCTTCGGGGAAAATGGAGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp GTAGGTGGTCTCTTCCAGCTCATCACGGATCTCGTTGTTGGCACATaGGAAGTCTCGGAGTGTTTGTCTGTCACCTTCGCTCTTGGACAG +
Preference number: 5 (lower is better)
Translates to: VGGLFQLITDLVVGT*EVSECLSVTFALGQ
Trigger: CTGTCCAAGAGCGAAGGTGACAGACAAACACTCCGAGACTTCGCATGTGCCAACAACGAGATCCGTGATGAGCTGGAAGAGACCACCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TACACATTGCCATATTCCATCTCGGTGATGGTGATCGTCTTGACGTaGCAGACAAGCTCTCTCTTGGGAATGAACCGGTCCTCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: YTLPYSISVMVIVLT*QTSSLLGMNRSSLA
Trigger: GGCCAGGGAGGACCGGTTCATTCCCAAGAGAGAGCTTGTCTGGCACGTCAAGACGATCACCATCACCGAGATGGAATATGGCAATGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp GCAGCTCTCCCAACTCTAACGTCTCCAGAAAGAAGCGGTCTGTACTaGCCCTCTCGAAGAGGTTGCGCATTTTCTGTTTCAGTTCGCGCT +
Preference number: 5 (lower is better)
Translates to: AALPTLTSPERSGLY*PSRRGCAFSVSVRA
Trigger: AGCGCGAACTGAAACAGAAAATGCGCAACCTCTTCGAGAGGGGCAGTACAGACCGCTTCTTTCTGGAGACGTTAGAGTTGGGAGAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp TCCTGTGTTCATGTTCTTCAACAGGATCCTCTCCAGGAACCACTCTaGCCGGCTACCCATCCCATCAATGCGGATGCGCATCTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: SCVHVLQQDPLQEPL*PATHPINADAHLGE
Trigger: TTCACCAAGATGCGCATCCGCATTGATGGGATGGGTAGCCGGCCAGAGTGGTTCCTGGAGAGGATCCTGTTGAAGAACATGAACACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTAAAGCAGACTCACTCTaGCTGGTGAGATGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTKADSL*LVRWSL
Trigger: CAAGCTCCATCTCACCAGCAAGAGTGAGTCTGCTTT...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCGGTCACCCTCCACCTaGCTCAGCCAGTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYRSPST*LSQLLQ
Trigger: CTGCAACAACTGGCTGAGCAAGGTGGAGGGTGACCG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACGGTCACCCTCCACCTaGCTCAGCCAGTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGRSPST*LSQLLQ
Trigger: CTGCAACAACTGGCTGAGCAAGGTGGAGGGTGACCG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGCGTCCAGTGTGAACTaGTCTTCAGCTCCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLASSVN*SSAPFS
Trigger: TGAAAAGGGAGCTGAAGACAAGTTCACACTGGACGC...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACGGTTGACGCCTATGTaGCCATGCCCGATGGAGACC +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKERLTPM*PCPMET
Trigger: GGTCTCCATCGGGCATGGCAACATAGGCGTCAACCG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCTTTCTTCAGATCAGTaGTCCAGACCCAAAGGGACC +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLLSSDQ*SRPKGT
Trigger: GGTCCCTTTGGGTCTGGACAACTGATCTGAAGAAAG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACCTGGCTTGAACCACTaGTTGTTGGGGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVPGLNH*LLGFRR
Trigger: TCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCAATGATGCCTGGCTaGAACCACTTGTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSMMPG*NHLLLG
Trigger: CCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTCAATGATGCCTGGCTaGAACCACTTGTTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLSMMPG*NHLLLG
Trigger: CCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCCAATCACCAGCCTGTaGATGGTTCCAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLPITSL*MVPMFS
Trigger: GCTGAACATTGGAACCATCAACAGGCTGGTGATTGG...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGTGCCTGCATTCTTCTaGTCCCCAGTCTTTATGGTC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVVPAFF*SPVFMV
Trigger: GACCATAAAGACTGGGGACAAGAAGAATGCAGGCAC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCGTCGTCCTCATTCTTaGCCAGCCAGCGGCCACAGG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIRRPHS*PASGHR
Trigger: CCTGTGGCCGCTGGCTGGCAAAGAATGAGGACGACG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGCAGGGCTGCTGCAGTaGCTACTGCGGTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIAGLLQ*LLRSPV
Trigger: CACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTGC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGAGGGTCATGAAGATATaGGAGTCAGTACCTCCACCG +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLRVMKI*ESVPPP
Trigger: CGGTGGAGGTACTGACTCCAATATCTTCATGACCCT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGATGAAGGTGTCATTTaGTTCCCGCTCAAACCTGGC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVDEGVI*FPLKPG
Trigger: GCCAGGTTTGAGCGGGAACAAAATGACACCTTCATC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGATGAAGGTGTCATTTaGTTCCCGCTCAAACCTGGC +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTDEGVI*FPLKPG
Trigger: GCCAGGTTTGAGCGGGAACAAAATGACACCTTCATC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGT +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVGNIPL*SCQTLS
Trigger: ACTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGAGCTGGAAAATGTCCTaGGACCCCCGATCAAACACT +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLSWKMS*DPRSNT
Trigger: AGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGCT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTACGGTTAACGTCGAACTaGTACTGCACAATCACCTCC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVRLTSN*YCTITS
Trigger: GGAGGTGATTGTGCAGTACAAGTTCGACGTTAACCG...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTAGTTCATTGTCTTCCTaGCCCCGGGCCAGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIISSLSS*PRASQR
Trigger: CCGCTGGCTGGCCCGGGGCAAGGAAGACAATGAACT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS TCA 90 bp GATAGTCCAGCCAGATGCGGTTGGTGCATTCATCATCTTCCCCAATaGGCAAGACAAAGGCACGGCTATCAGTGGCTGCCTCCTTGTGTT +
Preference number: 5 (lower is better)
Translates to: DSPARCGWCIHHLPQ*ARQRHGYQWLPPCV
Trigger: AACACAAGGAGGCAGCCACTGATAGCCGTGCCTTTGTCTTGCTCATTGGGGAAGATGATGAATGCACCAACCGCATCTGGCTGGACTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 90 bp TTTCCACAAGGAACTCCTTGGATCTGTTCTTCCTGCCCTCCAGTATaGGCCAGACGTTCTCTCTGGTTTCGCCCCCGTTGCCTGTTTCTA +
Preference number: 5 (lower is better)
Translates to: FPQGTPWICSSCPPV*ARRSLWFRPRCLFL
Trigger: TAGAAACAGGCAACGGGGGCGAAACCAGAGAGAACGTCTGGCTCATACTGGAGGGCAGGAAGAACAGATCCAAGGAGTTCCTTGTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp CTGCCTATCATGCCACGCCCGAATCTTATAGAACCTGCCGAGATCTaGGAGCTCCATCCTGAACTTCTCAATGATGCCTGGCTTGAACCA +
Preference number: 5 (lower is better)
Translates to: LPIMPRPNLIEPAEI*ELHPELLNDAWLEP
Trigger: TGGTTCAAGCCAGGCATCATTGAGAAGTTCAGGATGGAGCTCCCAGATCTCGGCAGGTTCTATAAGATTCGGGCGTGGCATGATAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp TCTCAATCTCGTAGTGGACCAATTTCTGGATCTCCACCACCTCGCTaGGATACAGCTCCACCTCCAGACGCCCATCAGCTTGGTTCTTAT +
Preference number: 5 (lower is better)
Translates to: SQSRSGPISGSPPPR*DTAPPPDAHQLGSY
Trigger: ATAAGAACCAAGCTGATGGGCGTCTGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGATCCAGAAATTGGTCCACTACGAGATTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp AGGTATCTGTCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTTaGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTGCCTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: RYLSGKCPWTPDQTL*NGWRGRGLRSCLLP
Trigger: GGGAAGAAGGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGACAGATACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CCA 90 bp CAATCTCGTAGGTGGTCTCTTCCAGCTCATCACGGATCTCGTTGTTaGCACATGCGAAGTCTCGGAGTGTTTGTCTGTCACCTTCGCTCT +
Preference number: 5 (lower is better)
Translates to: QSRRWSLPAHHGSRC*HMRSLGVFVCHLRS
Trigger: AGAGCGAAGGTGACAGACAAACACTCCGAGACTTCGCATGTGCCAACAACGAGATCCGTGATGAGCTGGAAGAGACCACCTACGAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGGCTTGAACCACTTGTaGTTGGGGTTCAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVGLNHL*LGFRRI
Trigger: GATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGGCTTGAACCACTTGTaGTTGGGGTTCAGAAGAATC +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTGLNHL*LGFRRI
Trigger: GATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTCATTGTCATCTTCATaGGCATCCAGCCAGCGATTG +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTSLSSS*ASSQRL
Trigger: CAATCGCTGGCTGGATGCCAATGAAGATGACAATGA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCAGGGGAACTCCACGTaGTCACTCTCGGGTTGTCCC +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIQGNST*SLSGCP
Trigger: GGGACAACCCGAGAGTGACAACGTGGAGTTCCCCTG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACTGTCACCTTCGCTCTaGGACAGCCAGCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGLSPSL*DSQQSH
Trigger: GTGTGACTGCTGGCTGTCCAAGAGCGAAGGTGACAG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAACGATGACCTCGTACTaGACTGGCACCAGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKETMTSY*TGTRLW
Trigger: CCAGAGCCTGGTGCCAGTCAAGTACGAGGTCATCGT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTGGCCCTGCTCAAACTaGTTGGACTTGTCTGATTTC +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLWPCSN*LDLSDF
Trigger: GAAATCAGACAAGTCCAACAAGTTTGAGCAGGGCCA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS TCA 90 bp TCAGAAGAATCTCATCCGTCCTCCCCTTCTTCCCGTAAATCTGGATaGAGATGGGCGAGTTGGTGCCGGCTTTCTTCAGATCAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SEESHPSSPSSRKSG*RWASWCRLSSDQLS
Trigger: GGACAACTGATCTGAAGAAAGCCGGCACCAACTCGCCCATCTTCATCCAGATTTACGGGAAGAAGGGGAGGACGGATGAGATTCTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 90 bp CCCTCAGTTTGCAGAGGTGTCCCAGGCTCAGCATGTCAGAAAAGTTaGAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PSVCRGVPGSACQKS*RCLCCSAQTCSSWL
Trigger: CAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTCTGACATGCTGAGCCTGGGACACCTCTGCAAACTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 90 bp TCCTCCTCATCATCGCTGCCTTTCTTCTTTTTCTTCTTCTTTCTCTaGAGCTTAGCCTTCAGCCTCTCCTTCTTCAGCAGCTGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: SSSSSLPFFFFFFFL*SLAFSLSFFSSCRS
Trigger: GCTGCGGCAGCTGCTGAAGAAGGAGAGGCTGAAGGCTAAGCTGCAGAGAAAGAAGAAGAAAAAGAAGAAAGGCAGCGATGATGAGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CCA 90 bp CACCTTGCTCAGCCAGTTGTTGCAGTTGAAGTAGTAGCGGAGATGTaGCCTCTTCATGTCAGTCACTATAACTCGGTCCAGGTACCAGCT +
Preference number: 5 (lower is better)
Translates to: HLAQPVVAVEVVAEM*PLHVSHYNSVQVPA
Trigger: AGCTGGTACCTGGACCGAGTTATAGTGACTGACATGAAGAGGCCACATCTCCGCTACTACTTCAACTGCAACAACTGGCTGAGCAAGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 90 bp CCTGCCGAGATCTGGGAGCTCCATCCTGAACTTCTCAATGATGCCTaGCTTGAACCACTTGTTGTTGGGGTTCAGAAGAATCTCATCCGT +
Preference number: 5 (lower is better)
Translates to: PAEIWELHPELLNDA*LEPLVVGVQKNLIR
Trigger: ACGGATGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAGTTCAGGATGGAGCTCCCAGATCTCGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCTGGTGAGATGGAGCTaGGGAGAGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYLVRWS*GESPFS
Trigger: AGAGAATGGGCTCTCTCCCAAGCTCCATCTCACCAG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAATGTCTCTCTGGATTTaGCCATCATCTTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVMSLWI*PSSSSS
Trigger: GCTGGATGAAGATGATGGCAAAATCCAGAGAGACAT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACCATCATCCTTGTCTTaGTCCAGCCACCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEPSSLS*SSHLRQ
Trigger: CTGCCTCAGGTGGCTGGACAAAGACAAGGATGATGG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGCGCACCACTTGGTGTaGTCATGGCGGAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIAHHLV*SWRSLI
Trigger: GATCAAGCTCCGCCATGACAACACCAAGTGGTGCGC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAATGATGATGAACACATaGGCATCCGTGCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEMMMNT*ASVPAP
Trigger: GGGGGCAGGCACGGATGCCAATGTGTTCATCATCAT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTTGAAGGTGTCTGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLKVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACAGACACCTTCAA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATTGAAGGTGTCTGTGTaGTTCCGCTCAAACTTGTTC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVLKVSV*FRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACAGACACCTTCAA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCTGGTGAGATGGAGCTaGGGAGAGAGCCCATTCTCT +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIILVRWS*GESPFS
Trigger: AGAGAATGGGCTCTCTCCCAAGCTCCATCTCACCAG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATTGTTGTGGCCCACATaGATCTTCATCAGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKELLWPT*IFISCP
Trigger: GGGGCAGCTGATGAAGATCAATGTGGGCCACAACAA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACATGAAGATGGGCGAGTaGGTGCCGGCTTTCTTCAGA +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYMKMGE*VPAFFR
Trigger: TCTGAAGAAAGCCGGCACCAACTCGCCCATCTTCAT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTTGAACCACTTGTTGTaGGGGTTCAGAAGAATCTCA +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLNHLL*GFRRIS
Trigger: TGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTGAACCACTTGTTGTaGGGGTTCAGAAGAATCTCA +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLLNHLL*GFRRIS
Trigger: TGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAA...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTTTCTTGAGCGTGGCATaGCTGTCACTGGGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIFLSVA*LSLGSN
Trigger: GTTGCTGCCCAGTGACAGCAATGCCACGCTCAAGAA...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGACAAGAAGAACCTGCTaGATGGTATCAGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: KPQFSIHTLQQVPTWVPLTRRTC*MVSDFS
Trigger: AGAGAAGTCTGATACCATCAAGCAGGTTCTTCTTGT...CAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAACAAGAAGAACCTGCTaGATGGTATCAGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVTRRTC*MVSDFS
Trigger: AGAGAAGTCTGATACCATCAAGCAGGTTCTTCTTGT...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCCCGATCAAACACTTaGGAACGGCTGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPRSNT*ERLERK
Trigger: CTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTAGGTAGATTTATCTTTTaGTTCCAGAGCCAGGTTGTC +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVGRFIF*FQSQVV
Trigger: GACAACCTGGCTCTGGAACAAAAAGATAAATCTACC...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp AGTCCCACTCCCGGAGAGCTAGGGAGATGGGTGTTGAACACAAGATGGAGGGTATCAAATTTGTCACTGTaGGTTTTGGAGGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPTPGELGRWVLNTRWRVSNLSL*VLEDFR
Trigger: CCTGAAGTCCTCCAAAACCAACAGTGACAAATTTGA...TACCCTCCATCTTGTGTTCAACACCCATCTCCCTAGCTCTCCGGGAGTGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCTCGGATGGTCTTCTaGTCATCCTCAGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSRMVF*SSSEVA
Trigger: TGCCACCTCTGAGGATGACAAGAAGACCATCCGAGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTATGATGATGAACACATaGGCATCCGTGCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIMMMNT*ASVPAP
Trigger: GGGGGCAGGCACGGATGCCAATGTGTTCATCATCAT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCAAACTTGTTCCAGTaGGCTGACTGCTTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSNLFQ*ADCFRA
Trigger: GGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCTGGTTTCGCCCCCGTaGCCTGTTTCTATGACAATC +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYLVSPP*PVSMTI
Trigger: GATTGTCATAGAAACAGGCAACGGGGGCGAAACCAG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTCCACAAGGAACTCCTaGGATCTGTTCTTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSTRNS*DLFFLP
Trigger: GGGCAGGAAGAACAGATCCAAGGAGTTCCTTGTGGA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGTGATGGTGATCGTCTaGACGTGCCAGACAAGCTCT +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEVMVIV*TCQTSS
Trigger: AGAGCTTGTCTGGCACGTCAAGACGATCACCATCAC...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAAGCAGACTCACTCTaGCTGGTGAGATGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGKADSL*LVRWSL
Trigger: CAAGCTCCATCTCACCAGCAAGAGTGAGTCTGCTTT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACCTTTCTTCAGATCAGTaGTCCAGACCCAAAGGGACC +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYLSSDQ*SRPKGT
Trigger: GGTCCCTTTGGGTCTGGACAACTGATCTGAAGAAAG...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGACCTGGCTTGAACCACTaGTTGTTGGGGTTCAGAAGA +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGPGLNH*LLGFRR
Trigger: TCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGG...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGCATCCAGCCAGCGATaGCAATTGAAGTTATATTTA +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTASSQR*QLKLYL
Trigger: TAAATATAACTTCAATTGCAATCGCTGGCTGGATGC...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACCAATCACCAGCCTGTaGATGGTTCCAATGTTCAGC +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEPITSL*MVPMFS
Trigger: GCTGAACATTGGAACCATCAACAGGCTGGTGATTGG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACTTCTGTTCCCTCTTGTaGGTGCACAGGAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYFCSLL*VHRNFC
Trigger: GCAGAAGTTCCTGTGCACCAACAAGAGGGAACAGAA...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATTGTTCCGCTCAAACTaGTTCCAGTTGGCTGACTGC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGLFRSN*FQLADC
Trigger: GCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGGAAATATCCCTTTGTaGTCGTGCCAGACCCTCAGT +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYGNIPL*SCQTLS
Trigger: ACTGAGGGTCTGGCACGACAACAAAGGGATATTTCC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCAGGAAATATCCCTTaGTTGTCGTGCCAGACCCTC +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPGNIP*LSCQTL
Trigger: GAGGGTCTGGCACGACAACAAAGGGATATTTCCTGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp GAAGCCCCAATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTTTAAAGAAGTACACATaGCCATATTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: EAPIFHPHPAASPNLGTTLKKYT*PYSISV
Trigger: CACCGAGATGGAATATGGCAATGTGTACTTCTTTAA...AGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAATTGGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACCCCTCTCGAAGAGGTaGCGCATTTTCTGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEPLSKR*RIFCFS
Trigger: ACTGAAACAGAAAATGCGCAACCTCTTCGAGAGGGG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGCGTCCAGTGTGAACTaGTCTTCAGCTCCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIASSVN*SSAPFS
Trigger: TGAAAAGGGAGCTGAAGACAAGTTCACACTGGACGC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATTTTCCCACTGTTCTaGTTCCCTCTGGCTCCATAC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGIFPLF*FPLAPY
Trigger: GTATGGAGCCAGAGGGAACAAGAACAGTGGGAAAAT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCATTGTCATCTTCATaGGCATCCAGCCAGCGATTG +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSLSSS*ASSQRL
Trigger: CAATCGCTGGCTGGATGCCAATGAAGATGACAATGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCCCTCACGATCTCATaGTCATCTTCATTGGCATCC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSLTIS*SSSLAS
Trigger: GGATGCCAATGAAGATGACAATGAGATCGTGAGGGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGTGCCTGCATTCTTCTaGTCCCCAGTCTTTATGGTC +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIVPAFF*SPVFMV
Trigger: GACCATAAAGACTGGGGACAAGAAGAATGCAGGCAC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGTTTCTGTTCCCTCTaGTTGGTGCACAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSFCSL*LVHRNF
Trigger: GAAGTTCCTGTGCACCAACAAGAGGGAACAGAAACT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAGTTTCTGTTCCCTCTaGTTGGTGCACAGGAACTTC +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKESFCSL*LVHRNF
Trigger: GAAGTTCCTGTGCACCAACAAGAGGGAACAGAAACT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAACCTTTCTCAAACTTGTaGGTGCGGTTCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEPFSNL*VRFSDL
Trigger: CAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGG...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGTTCCTTTCTCAAACTaGTTGGTGCGGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYVPFSN*LVRFSD
Trigger: GTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAAC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAGTTCCTTTCTCAAACTaGTTGGTGCGGTTCTCTGAC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGVPFSN*LVRFSD
Trigger: GTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAAC...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTAGGGTCATGAAGATATaGGAGTCAGTACCTCCACCG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIRVMKI*ESVPPP
Trigger: CGGTGGAGGTACTGACTCCAATATCTTCATGACCCT...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCCCTCTCGAAGAGGTaGCGCATTTTCTGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPLSKR*RIFCFS
Trigger: ACTGAAACAGAAAATGCGCAACCTCTTCGAGAGGGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCCATCGCCCCGAGACTaGTCTAGCCACCTGCCGCAG +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRPSPRD*SSHLPQ
Trigger: CTGCGGCAGGTGGCTAGACAAGTCTCGGGGCGATGG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATGTCTCTCTGGATTTaGCCATCATCTTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGMSLWI*PSSSSS
Trigger: GCTGGATGAAGATGATGGCAAAATCCAGAGAGACAT...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCATTCCGTTGTTATCTaGGGTGCCAAAGAGCGTGAT +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIHSVVI*GAKERD
Trigger: ATCACGCTCTTTGGCACCCAAGATAACAACGGAATG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACGTAACCTCAAATACCTaGAAGTACTTCCTCTTCCGC +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYVTSNT*KYFLFR
Trigger: GCGGAAGAGGAAGTACTTCAAGGTATTTGAGGTTAC...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGATCAAACTTGTTGGACTaGTCTGATTTCTTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: IHTLQQVPTWVPLLLLQGSNLLD*SDFFRG
Trigger: GCCCCTGAAGAAATCAGACAAGTCCAACAAGTTTGA...TCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CCA 90 bp TCTTCTTTCCCTTCTTTTGGGACAGCCAGTCTCCATAGTAGAACATaGTTAGGTCTCCTGTGTTCATGTTCTTCAACAGGATCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SSFPSFGTASLHSRT*LGLLCSCSSTGSSP
Trigger: TGGAGAGGATCCTGTTGAAGAACATGAACACAGGAGACCTAACCATGTTCTACTATGGAGACTGGCTGTCCCAAAAGAAGGGAAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAATCAAATTTGTCACTGTaGGTTTTGGAGGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKESNLSL*VLEDFR
Trigger: CCTGAAGTCCTCCAAAACCAACAGTGACAAATTTGA...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTCCCAGCTCTATTTTCTaGATGATGCCCACATCTAAG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIPSSIF*MMPTSK
Trigger: CTTAGATGTGGGCATCATCAAGAAAATAGAGCTGGG...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000096547.11
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAAGCATGTCAGAAAAGTaGAAGGTGTCTGTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKESMSEK*KVSVLF
Trigger: GAACAACACAGACACCTTCAACTTTTCTGACATGCT...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAGCATGTCAGAAAAGTaGAAGGTGTCTGTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: FPSTPCSKSQPGYHCYYYSMSEK*KVSVLF
Trigger: GAACAACACAGACACCTTCAACTTTTCTGACATGCT...GTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTACAAGGAAGCATCCAGCCAGCGATaGCAATTGAAGTTATATTTA +
Preference number: 5 (lower is better)
Translates to: STPCSKSQPGYHCYYYKEASSQR*QLKLYL
Trigger: TAAATATAACTTCAATTGCAATCGCTGGCTGGATGC...TTCCTTGTAATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTGGTAGATTTATCTTTTaGTTCCAGAGCCAGGTTGTC +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIGRFIF*FQSQVV
Trigger: GACAACCTGGCTCTGGAACAAAAAGATAAATCTACC...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTCCACGTCTGCCATCTaGGAACTCAGGGCGATCTCC +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRSTSAI*ELRAIS
Trigger: GGAGATCGCCCTGAGTTCCAAGATGGCAGACGTGGA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCCATCATCCTTGTCTTaGTCCAGCCACCTGAGGCAG +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRPSSLS*SSHLRQ
Trigger: CTGCCTCAGGTGGCTGGACAAAGACAAGGATGATGG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCCCCGATCAAACACTTaGGAACGGCTGGAGAGGAAG +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRPRSNT*ERLERK
Trigger: CTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTTTAAAGAAGTACACATaGCCATATTCCATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIILKKYT*PYSISV
Trigger: CACCGAGATGGAATATGGCAATGTGTACTTCTTTAA...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp ATTTTCCATCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTGTTATTATTTACTCTCCAAAGATGTaGATAAAGACATCAGCATCT +
Preference number: 5 (lower is better)
Translates to: IFHPHPAASPNLGTTVIIYSPKM*IKTSAS
Trigger: AGATGCTGATGTCTTTATCAACATCTTTGGAGAGTA...AATAATAACAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGATGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTACTTCCTCTTCCGCTaGAGGGGGATGAGGCAATCA +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRYFLFR*RGMRQS
Trigger: TGATTGCCTCATCCCCCTCAAGCGGAAGAGGAAGTA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS TCA 90 bp CCTTGTAGACTTGTCTTAAGGATCCATCTTTCATATACTTCTCAGTaGAGATGTCATAAGGGACCAGTTCTCGGATGGTCTTCTTGTCAT +
Preference number: 5 (lower is better)
Translates to: PCRLVLRIHLSYTSQ*RCHKGPVLGWSSCH
Trigger: ATGACAAGAAGACCATCCGAGAACTGGTCCCTTATGACATCTTCACTGAGAAGTATATGAAAGATGGATCCTTAAGACAAGTCTACAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCGTATTTGTTTCCTCTaGGCATGTCCATGGGGTCGA +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRRICFL*ACPWGR
Trigger: TCGACCCCATGGACATGCCAAGAGGAAACAAATACG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTTCTGTTCCCTCTTGTaGGTGCACAGGAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRFCSLL*VHRNFC
Trigger: GCAGAAGTTCCTGTGCACCAACAAGAGGGAACAGAA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGATTTTCCCACTGTTCTaGTTCCCTCTGGCTCCATAC +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRIFPLF*FPLAPY
Trigger: GTATGGAGCCAGAGGGAACAAGAACAGTGGGAAAAT...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTCCCTCACGATCTCATaGTCATCTTCATTGGCATCC +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRSLTIS*SSSLAS
Trigger: GGATGCCAATGAAGATGACAATGAGATCGTGAGGGA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCATTCCGTTGTTATCTaGGGTGCCAAAGAGCGTGAT +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRHSVVI*GAKERD
Trigger: ATCACGCTCTTTGGCACCCAAGATAACAACGGAATG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGCCTTTCTCAAACTTGTaGGTGCGGTTCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRPFSNL*VRFSDL
Trigger: CAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGG...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS-3UTR CAA 90 bp TGGATTATGAGATGTGCTGAATATAATTCTTGTATATCCAAGAGATGGAGAAGGTACTCTCCAAAGATGTaGATAAAGACATCAGCATCT +
Preference number: 5 (lower is better)
Translates to: WIMRCAEYNSCISKRWRRYSPKM*IKTSAS
Trigger: AGATGCTGATGTCTTTATCAACATCTTTGGAGAGTA...CCTTCTCCATCTCTTGGATATACAAGAATTATATTCAGCACATCTCATAATCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS GCA 72 bp GGGCACACGGATCTGGACGCTGCCCAGGAACCAGCCTaGATGCATGCCCGTGCTGTCGTGCCCAATCACCAG +
Preference number: 6 (lower is better)
Translates to: GHTDLDAAQEPA*MHARAVVPNHQ
Trigger: CTGGTGATTGGGCACGACAGCACGGGCATGCATGCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp AGCCACCGGTTAGCCGGGAAGGTGTACTGCTTGCCTTaGCGGGGCACACGGATCTGGACGCTGCCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SHRLAGKVYCLP*RGTRIWTLPRN
Trigger: GTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp CAGCCACCGGTTAGCCGGGAAGGTGTACTGCTTGCCTaGGCGGGGCACACGGATCTGGACGCTGCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: QPPVSREGVLLA*AGHTDLDAAQE
Trigger: TTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp TTATCCAGCCACCGGTTAGCCGGGAAGGTGTACTGCTaGCCTTGGCGGGGCACACGGATCTGGACGCTGCCC +
Preference number: 6 (lower is better)
Translates to: LSSHRLAGKVYC*PWRGTRIWTLP
Trigger: GGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCTGGATAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GTTCTTATCCAGCCACCGGTTAGCCGGGAAGGTGTACTGCTTGCCTaGGCGGGGCACACGGATCTGGACGCTGCCCAGGAACCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: VLIQPPVSREGVLLA*AGHTDLDAAQEPAC
Trigger: GCAGGCTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCTGGATAAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GCTTGGTTCTTATCCAGCCACCGGTTAGCCGGGAAGGTGTACTGCTaGCCTTGGCGGGGCACACGGATCTGGACGCTGCCCAGGAACCAG +
Preference number: 6 (lower is better)
Translates to: AWFLSSHRLAGKVYC*PWRGTRIWTLPRNQ
Trigger: CTGGTTCCTGGGCAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCTGGATAAGAACCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp CGTTGGCATCGGTGCCGGCCTTGGGCACGTTCCCTGTaGTCACTTGGACCTCGTAGGTGTTGGGCTCAGGAC +
Preference number: 6 (lower is better)
Translates to: RWHRCRPWARSL*SLGPRRCWAQD
Trigger: GTCCTGAGCCCAACACCTACGAGGTCCAAGTGATCACAGGGAACGTGCCCAAGGCCGGCACCGATGCCAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS GCA 72 bp TCACAGTACCAGCCGCGGTTGACGCCTATGTTGCCATaGCCGATGGAGACCCGGCTCAGAGGGCTAAGGAGG +
Preference number: 6 (lower is better)
Translates to: SQYQPRLTPMLP*PMETRLRGLRR
Trigger: CCTCCTTAGCCCTCTGAGCCGGGTCTCCATCGGGCATGGCAACATAGGCGTCAACCGCGGCTGGTACTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp TCCAGAGCCAGGTTGTCAAGGGGGTTATTGTCACCCTaGCCCCCGCCCTCCTCGTCTTCACTGGGTAGCACG +
Preference number: 6 (lower is better)
Translates to: SRARLSRGLLSP*PPPSSSSLGST
Trigger: CGTGCTACCCAGTGAAGACGAGGAGGGCGGGGGGCAGGGTGACAATAACCCCCTTGACAACCTGGCTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp AGGATCACCACCTTCTCACAGTACCAGCCGCGGTTGACGCCTATGTaGCCATGCCCGATGGAGACCCGGCTCAGAGGGCTAAGGAGGACG +
Preference number: 6 (lower is better)
Translates to: RITTFSQYQPRLTPM*PCPMETRLRGLRRT
Trigger: CGTCCTCCTTAGCCCTCTGAGCCGGGTCTCCATCGGGCATGGCAACATAGGCGTCAACCGCGGCTGGTACTGTGAGAAGGTGGTGATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GTAAAGGGGCACAGGATCACCACCTTCTCACAGTACCAGCCGCGGTaGACGCCTATGTTGCCATGCCCGATGGAGACCCGGCTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: VKGHRITTFSQYQPR*TPMLPCPMETRLRG
Trigger: CCCTCTGAGCCGGGTCTCCATCGGGCATGGCAACATAGGCGTCAACCGCGGCTGGTACTGTGAGAAGGTGGTGATCCTGTGCCCCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp ACAGGATCACCACCTTCTCACAGTACCAGCCGCGGTTaGCGCCTATGTTGCCATGCCCGATGGAGACCCGGC +
Preference number: 6 (lower is better)
Translates to: TGSPPSHSTSRG*RLCCHARWRPG
Trigger: GCCGGGTCTCCATCGGGCATGGCAACATAGGCGTCAACCGCGGCTGGTACTGTGAGAAGGTGGTGATCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp TTCTTATCCAGCCACCGGTTAGCCGGGAAGGTGTACTaGTTGCCTTGGCGGGGCACACGGATCTGGACGCTG +
Preference number: 6 (lower is better)
Translates to: FLSSHRLAGKVY*LPWRGTRIWTL
Trigger: CAGCGTCCAGATCCGTGTGCCCCGCCAAGGCAAGCAGTACACCTTCCCGGCTAACCGGTGGCTGGATAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CTTCCCCGTAGATCTGCACGAAGACTCGGGAAGTGGTaGCGGCGCCACCCACATCCCCCGTCCAAATCTCAA +
Preference number: 6 (lower is better)
Translates to: LPRRSARRLGKW*RRHPHPPSKSQ
Trigger: TTGAGATTTGGACGGGGGATGTGGGTGGCGCCGGCACCACTTCCCGAGTCTTCGTGCAGATCTACGGGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CCCCGGGCCAGCCAGCGGTTAACGTCGAACTTGTACTaGACAATCACCTCCTGCATCCCTGGCCCATACTCC +
Preference number: 6 (lower is better)
Translates to: PRASQRLTSNLY*TITSCIPGPYS
Trigger: GGAGTATGGGCCAGGGATGCAGGAGGTGATTGTGCAGTACAAGTTCGACGTTAACCGCTGGCTGGCCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CCA 72 bp CTTCTTCCCCGTAGATCTGCACGAAGACTCGGGAAGTaGTGCCGGCGCCACCCACATCCCCCGTCCAAATCT +
Preference number: 6 (lower is better)
Translates to: LLPRRSARRLGK*CRRHPHPPSKS
Trigger: AGATTTGGACGGGGGATGTGGGTGGCGCCGGCACCACTTCCCGAGTCTTCGTGCAGATCTACGGGGAAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp TCTCTCTTGGGAATGAACCGGTCCTCCCTGGCCAGGTaGCCCACACAGAGGGAGGCGATGTCTCCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: SLLGMNRSSLAR*PTQREAMSPKK
Trigger: CTTCTTGGGAGACATCGCCTCCCTCTGTGTGGGCCACCTGGCCAGGGAGGACCGGTTCATTCCCAAGAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp ACCTTCTCACAGTACCAGCCGCGGTTGACGCCTATGTaGCCATGCCCGATGGAGACCCGGCTCAGAGGGCTA +
Preference number: 6 (lower is better)
Translates to: TFSQYQPRLTPM*PCPMETRLRGL
Trigger: TAGCCCTCTGAGCCGGGTCTCCATCGGGCATGGCAACATAGGCGTCAACCGCGGCTGGTACTGTGAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp CACAGGATCACCACCTTCTCACAGTACCAGCCGCGGTaGACGCCTATGTTGCCATGCCCGATGGAGACCCGG +
Preference number: 6 (lower is better)
Translates to: HRITTFSQYQPR*TPMLPCPMETR
Trigger: CCGGGTCTCCATCGGGCATGGCAACATAGGCGTCAACCGCGGCTGGTACTGTGAGAAGGTGGTGATCCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp AAGAGCTCTCGCCAGGTGAGTCCATCGCCCCGAGACTaGTCTAGCCACCTGCCGCAGGAGAAGATTGTGGCC +
Preference number: 6 (lower is better)
Translates to: KSSRQVSPSPRD*SSHLPQEKIVA
Trigger: GGCCACAATCTTCTCCTGCGGCAGGTGGCTAGACAAGTCTCGGGGCGATGGACTCACCTGGCGAGAGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS CAA 72 bp TCCTTGCCCCGGGCCAGCCAGCGGTTAACGTCGAACTaGTACTGCACAATCACCTCCTGCATCCCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: SLPRASQRLTSN*YCTITSCIPGP
Trigger: TGGGCCAGGGATGCAGGAGGTGATTGTGCAGTACAAGTTCGACGTTAACCGCTGGCTGGCCCGGGGCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 72 bp ATCGGTGCCGGCCTTGGGCACGTTCCCTGTGATCACTaGGACCTCGTAGGTGTTGGGCTCAGGACCAGACTG +
Preference number: 6 (lower is better)
Translates to: IGAGLGHVPCDH*DLVGVGLRTRL
Trigger: CAGTCTGGTCCTGAGCCCAACACCTACGAGGTCCAAGTGATCACAGGGAACGTGCCCAAGGCCGGCACCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 90 bp ACAGACGGGAAGAGCTCTCGCCAGGTGAGTCCATCGCCCCGAGACTaGTCTAGCCACCTGCCGCAGGAGAAGATTGTGGCCACTCCAGTA +
Preference number: 6 (lower is better)
Translates to: TDGKSSRQVSPSPRD*SSHLPQEKIVATPV
Trigger: TACTGGAGTGGCCACAATCTTCTCCTGCGGCAGGTGGCTAGACAAGTCTCGGGGCGATGGACTCACCTGGCGAGAGCTCTTCCCGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000148341.9
CDS TCA 72 bp CAACCATGGCGTCCAGGAGGTCAAAGACACGGGAGGTaGCACCATCGCCTCGGTCCTTGGCAAGCCAACAGT +
Preference number: 6 (lower is better)
Translates to: QPWRPGGQRHGR*HHRLGPWQANS
Trigger: ACTGTTGGCTTGCCAAGGACCGAGGCGATGGTGTCACCTCCCGTGTCTTTGACCTCCTGGACGCCATGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS GCA 72 bp TCAAGGTTTCTGTGCCATCTTTCTCAGGGAGGAGCCTaGGGATGTCCACGTGGGAGCAGTGCCACCCAGGGT +
Preference number: 6 (lower is better)
Translates to: SRFLCHLSQGGA*GCPRGSSATQG
Trigger: ACCCTGGGTGGCACTGCTCCCACGTGGACATCCGCAGGCTCCTCCCTGAGAAAGATGGCACAGAAACCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CGGCTCAGAGGGCTAAGGAGGACGGCCAGGTCGATGTaGAAGATATCTGTGCGGCCTCTGTCAAACACGCCA +
Preference number: 6 (lower is better)
Translates to: RLRGLRRTARSM*KISVRPLSNTP
Trigger: TGGCGTGTTTGACAGAGGCCGCACAGATATCTTCCACATCGACCTGGCCGTCCTCCTTAGCCCTCTGAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CTGGGATACAGCTCCACCTCCAGACGCCCATCAGCTTaGTTCTTATCCAGCCACCGGTTAGCCGGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: LGYSSTSRRPSA*FLSSHRLAGKV
Trigger: CACCTTCCCGGCTAACCGGTGGCTGGATAAGAACCAAGCTGATGGGCGTCTGGAGGTGGAGCTGTATCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CCATCTTTCTCAGGGAGGAGCCTGCGGATGTCCACGTaGGAGCAGTGCCACCCAGGGTTTATGCCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: PSFSGRSLRMST*EQCHPGFMPVL
Trigger: CAACACAGGCATAAACCCTGGGTGGCACTGCTCCCACGTGGACATCCGCAGGCTCCTCCCTGAGAAAGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp AGCACCCTGTCCAGGTACCAGCCACTGCCAGAGCCTTaGCCGTCATGTCTGACCCTCACCCTCCTCACTTTC +
Preference number: 6 (lower is better)
Translates to: STLSRYQPLPEP*PSCLTLTLLTF
Trigger: GAAAGTGAGGAGGGTGAGGGTCAGACATGACGGCAAAGGCTCTGGCAGTGGCTGGTACCTGGACAGGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GGCCGGCTACCCATCCCATCAATGCGGATGCGCATCTaGGTGAAGGGGGCGATGTCCAGGATCTCCATGATG +
Preference number: 6 (lower is better)
Translates to: GRLPIPSMRMRI*VKGAMSRISMM
Trigger: CATCATGGAGATCCTGGACATCGCCCCCTTCACCAAGATGCGCATCCGCATTGATGGGATGGGTAGCCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp ATGGTGATCGTCTTGACGTGCCAGACAAGCTCTCTCTaGGGAATGAACCGGTCCTCCCTGGCCAGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: MVIVLTCQTSSL*GMNRSSLARWP
Trigger: GGGCCACCTGGCCAGGGAGGACCGGTTCATTCCCAAGAGAGAGCTTGTCTGGCACGTCAAGACGATCACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TCTCTCACCAGCACCCTGTCCAGGTACCAGCCACTGCCAGAGCCTTaGCCGTCATGTCTGACCCTCACCCTCCTCACTTTCCTCATGGTG +
Preference number: 6 (lower is better)
Translates to: SLTSTLSRYQPLPEP*PSCLTLTLLTFLMV
Trigger: CACCATGAGGAAAGTGAGGAGGGTGAGGGTCAGACATGACGGCAAAGGCTCTGGCAGTGGCTGGTACCTGGACAGGGTGCTGGTGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp CGGGAAGCCGACTTCCTCTCGAAGAACAGTTTCTGTTCCCTCTTGTaGGTGCACAGGAACTTCTGCCGGGTGCACACGGCGTCACAGCCG +
Preference number: 6 (lower is better)
Translates to: READFLSKNSFCSLL*VHRNFCRVHTASQP
Trigger: CGGCTGTGACGCCGTGTGCACCCGGCAGAAGTTCCTGTGCACCAACAAGAGGGAACAGAAACTGTTCTTCGAGAGGAAGTCGGCTTCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp ACACGGGAGGTGACACCATCGCCTCGGTCCTTGGCAAGCCAACAGTaGCAGCGTAATGTGTACTTGGTACCCTGGGTAGGCACCGCCAAG +
Preference number: 6 (lower is better)
Translates to: TREVTPSPRSLASQQ*QRNVYLVPWVGTAK
Trigger: CTTGGCGGTGCCTACCCAGGGTACCAAGTACACATTACGCTGCAACTGTTGGCTTGCCAAGGACCGAGGCGATGGTGTCACCTCCCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CAA 90 bp ATCTCGGTGATGGTGATCGTCTTGACGTGCCAGACAAGCTCTCTCTaGGGAATGAACCGGTCCTCCCTGGCCAGGTGGCCCACACAGAGG +
Preference number: 6 (lower is better)
Translates to: ISVMVIVLTCQTSSL*GMNRSSLARWPTQR
Trigger: CCTCTGTGTGGGCCACCTGGCCAGGGAGGACCGGTTCATTCCCAAGAGAGAGCTTGTCTGGCACGTCAAGACGATCACCATCACCGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TCATCCTTGTCTTTGTCCAGCCACCTGAGGCAGGGGAACTCCACGTaGTCACTCTCGGGTTGTCCCTCTTCTCTCACCAGCACCCTGTCC +
Preference number: 6 (lower is better)
Translates to: SSLSLSSHLRQGNST*SLSGCPSSLTSTLS
Trigger: GGACAGGGTGCTGGTGAGAGAAGAGGGACAACCCGAGAGTGACAACGTGGAGTTCCCCTGCCTCAGGTGGCTGGACAAAGACAAGGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp AAAGCCTCGTCTGAAGCTCTGCGTGGAAGAGGTCCCTaGCGATGCTGCCGTCGTCCTCATTCTTTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: KASSEALRGRGP*RCCRRPHSLPA
Trigger: GGCTGGCAAAGAATGAGGACGACGGCAGCATCGTCAGGGACCTCTTCCACGCAGAGCTTCAGACGAGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp CCGTGCCGGCCGCGAAGACGTCACTGGTGTAGAGGGTaGTCTCATAGGGGACAAATGGTGTGTAAAGCCTCG +
Preference number: 6 (lower is better)
Translates to: PCRPRRRHWCRG*SHRGQMVCKAS
Trigger: CGAGGCTTTACACACCATTTGTCCCCTATGAGATCACCCTCTACACCAGTGACGTCTTCGCGGCCGGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp GGGGACAAATGGTGTGTAAAGCCTCGTCTGAAGCTCTaGGTGGAAGAGGTCCCTGACGATGCTGCCGTCGTC +
Preference number: 6 (lower is better)
Translates to: GDKWCVKPRLKL*VEEVPDDAAVV
Trigger: GACGACGGCAGCATCGTCAGGGACCTCTTCCACGCAGAGCTTCAGACGAGGCTTTACACACCATTTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp TGGAACTCAGGGCGATCTCCCAGAAGTCAGCAGGGCTaGTGCAGTTGCTACTGCGGTCTCCAGTGTACTCCT +
Preference number: 6 (lower is better)
Translates to: WNSGRSPRSQQG*CSCYCGLQCTP
Trigger: AGGAGTACACTGGAGACCGCAGTAGCAACTGCAGCAGCCCTGCTGACTTCTGGGAGATCGCCCTGAGTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp AGCCAACAGTTGCAGCGTAATGTGTACTTGGTACCCTaGGTAGGCACCGCCAAGCACAGCTCCTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: SQQLQRNVYLVP*VGTAKHSSSTS
Trigger: GCTGGTGGAGGAGCTGTGCTTGGCGGTGCCTACCCAGGGTACCAAGTACACATTACGCTGCAACTGTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CAA 72 bp TCTTTGTCCAGCCACCTGAGGCAGGGGAACTCCACGTaGTCACTCTCGGGTTGTCCCTCTTCTCTCACCAGC +
Preference number: 6 (lower is better)
Translates to: SLSSHLRQGNST*SLSGCPSSLTS
Trigger: GCTGGTGAGAGAAGAGGGACAACCCGAGAGTGACAACGTGGAGTTCCCCTGCCTCAGGTGGCTGGACAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp CTGGGCAGCAACTCTCGAACCAGCTGTCCATCATCCTaGTCTTTGTCCAGCCACCTGAGGCAGGGGAACTCC +
Preference number: 6 (lower is better)
Translates to: LGSNSRTSCPSS*SLSSHLRQGNS
Trigger: GGAGTTCCCCTGCCTCAGGTGGCTGGACAAAGACAAGGATGATGGACAGCTGGTTCGAGAGTTGCTGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GACTGGCCAGCCGGAACCAATTCCACAACAAGTTCATaGTCTTCCTTGCCCCGGGCCAGCCAGCGGTTAACG +
Preference number: 6 (lower is better)
Translates to: DWPAGTNSTTSS*SSLPRASQRLT
Trigger: CGTTAACCGCTGGCTGGCCCGGGGCAAGGAAGACAATGAACTTGTTGTGGAATTGGTTCCGGCTGGCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 90 bp AAGCGGGAAGCCGACTTCCTCTCGAAGAACAGTTTCTGTTCCCTCTaGTTGGTGCACAGGAACTTCTGCCGGGTGCACACGGCGTCACAG +
Preference number: 6 (lower is better)
Translates to: KREADFLSKNSFCSL*LVHRNFCRVHTASQ
Trigger: CTGTGACGCCGTGTGCACCCGGCAGAAGTTCCTGTGCACCAACAAGAGGGAACAGAAACTGTTCTTCGAGAGGAAGTCGGCTTCCCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TCCAGGAGGTCAAAGACACGGGAGGTGACACCATCGCCTCGGTCCTaGGCAAGCCAACAGTTGCAGCGTAATGTGTACTTGGTACCCTGG +
Preference number: 6 (lower is better)
Translates to: SRRSKTREVTPSPRS*ASQQLQRNVYLVPW
Trigger: CCAGGGTACCAAGTACACATTACGCTGCAACTGTTGGCTTGCCAAGGACCGAGGCGATGGTGTCACCTCCCGTGTCTTTGACCTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CAA 90 bp AACCACTCTGGCCGGCTACCCATCCCATCAATGCGGATGCGCATCTaGGTGAAGGGGGCGATGTCCAGGATCTCCATGATGAAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: NHSGRLPIPSMRMRI*VKGAMSRISMMKVS
Trigger: TGACACCTTCATCATGGAGATCCTGGACATCGCCCCCTTCACCAAGATGCGCATCCGCATTGATGGGATGGGTAGCCGGCCAGAGTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TCATTGTCTTCCTTGCCCCGGGCCAGCCAGCGGTTAACGTCGAACTaGTACTGCACAATCACCTCCTGCATCCCTGGCCCATACTCCTCT +
Preference number: 6 (lower is better)
Translates to: SLSSLPRASQRLTSN*YCTITSCIPGPYSS
Trigger: AGAGGAGTATGGGCCAGGGATGCAGGAGGTGATTGTGCAGTACAAGTTCGACGTTAACCGCTGGCTGGCCCGGGGCAAGGAAGACAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 90 bp TCAGGACCAGACTGGCCAGCCGGAACCAATTCCACAACAAGTTCATaGTCTTCCTTGCCCCGGGCCAGCCAGCGGTTAACGTCGAACTTG +
Preference number: 6 (lower is better)
Translates to: SGPDWPAGTNSTTSS*SSLPRASQRLTSNL
Trigger: CAAGTTCGACGTTAACCGCTGGCTGGCCCGGGGCAAGGAAGACAATGAACTTGTTGTGGAATTGGTTCCGGCTGGCCAGTCTGGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS TCA 72 bp CTGTGCATACAGTCACACGATACCGGGCCATTCCCATaGTCCTCCGCACAGTTGGGCCTTCTGCGGTCATCT +
Preference number: 6 (lower is better)
Translates to: LCIQSHDTGPFP*SSAQLGLLRSS
Trigger: AGATGACCGCAGAAGGCCCAACTGTGCGGAGGATCATGGGAATGGCCCGGTATCGTGTGACTGTATGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CTTTGGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTaGCTTCTTCCCCGTAGATCTGCACGAAGACTCGGG +
Preference number: 6 (lower is better)
Translates to: LWNGWRGRGLRS*LLPRRSARRLG
Trigger: CCCGAGTCTTCGTGCAGATCTACGGGGAAGAAGGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp GGCCCACACAGAGGGAGGCGATGTCTCCCAAGAAGATaGTGTCAAACTCAAAGGTGTCTGTGGTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GPHRGRRCLPRR*CQTQRCLWSPS
Trigger: GGAAGGGGACCACAGACACCTTTGAGTTTGACAGCATCTTCTTGGGAGACATCGCCTCCCTCTGTGTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp ACGATACCGGGCCATTCCCATGATCCTCCGCACAGTTaGGCCTTCTGCGGTCATCTCCCTCACGATCTCATT +
Preference number: 6 (lower is better)
Translates to: TIPGHSHDPPHS*AFCGHLPHDLI
Trigger: AATGAGATCGTGAGGGAGATGACCGCAGAAGGCCCAACTGTGCGGAGGATCATGGGAATGGCCCGGTATCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CGTAGTGGACCAATTTCTGGATCTCCACCACCTCGCTaGGATACAGCTCCACCTCCAGACGCCCATCAGCTT +
Preference number: 6 (lower is better)
Translates to: RSGPISGSPPPR*DTAPPPDAHQL
Trigger: AAGCTGATGGGCGTCTGGAGGTGGAGCTGTATCCCAGCGAGGTGGTGGAGATCCAGAAATTGGTCCACTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp GCGGCCACAGGGAAAAGTCATGCACTTCCCAAGAGATaGGGCATCCACCTCTACCCAGTCTACAAACCAGCC +
Preference number: 6 (lower is better)
Translates to: AATGKSHALPKR*GIHLYPVYKPA
Trigger: GGCTGGTTTGTAGACTGGGTAGAGGTGGATGCCCCATCTCTTGGGAAGTGCATGACTTTTCCCTGTGGCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CACCCACGTCCACGGCTTCCAGCTGGAAAATGTCCTTaGACCCCCGATCAAACACTTTGGAACGGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: HPRPRLPAGKCP*TPDQTLWNGWR
Trigger: TCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGCTGGAAGCCGTGGACGTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 72 bp TCCACACCCTGCAGCAAGTCCCAACCTGGGTACCACTaGCGCAGCTCTCCCAACTCTAACGTCTCCAGAAAG +
Preference number: 6 (lower is better)
Translates to: STPCSKSQPGYH*RSSPNSNVSRK
Trigger: CTTTCTGGAGACGTTAGAGTTGGGAGAGCTGCGCAAGTGGTACCCAGGTTGGGACTTGCTGCAGGGTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000123410.9
CDS CAA 72 bp TCACCCACGTCCACGGCTTCCAGCTGGAAAATGTCCTaGGACCCCCGATCAAACACTTTGGAACGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SPTSTASSWKMS*DPRSNTLERLE
Trigger: CTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGCTGGAAGCCGTGGACGTGGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 90 bp ATGGCTGTGGTCTCAGCTCCGCCCACTAAGATGTCTCTCTGGATTTaGCCATCATCTTCATCCAGCGCCAGCCAGCGGTTAAGGGGGAAG +
Preference number: 6 (lower is better)
Translates to: MAVVSAPPTKMSLWI*PSSSSSASQRLRGK
Trigger: CTTCCCCCTTAACCGCTGGCTGGCGCTGGATGAAGATGATGGCAAAATCCAGAGAGACATCTTAGTGGGCGGAGCTGAGACCACAGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GACTGGCCAGCCGGAACCAATTCCACAACAAGTTCATTGTCTTCCTaGCCCCGGGCCAGCCAGCGGTTAACGTCGAACTTGTACTGCACA +
Preference number: 6 (lower is better)
Translates to: DWPAGTNSTTSSLSS*PRASQRLTSNLYCT
Trigger: TGTGCAGTACAAGTTCGACGTTAACCGCTGGCTGGCCCGGGGCAAGGAAGACAATGAACTTGTTGTGGAATTGGTTCCGGCTGGCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS TCA 72 bp CCTTGGCATCTGTCCCTGCCCCAGGAACATTCCCTGTaGAGATCTGCACCGAGTACAGCACAATGTCCAGAG +
Preference number: 6 (lower is better)
Translates to: PWHLSLPQEHSL*RSAPSTAQCPE
Trigger: CTCTGGACATTGTGCTGTACTCGGTGCAGATCTTCACAGGGAATGTTCCTGGGGCAGGGACAGATGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CACCATCTCATAGAGCTGCCTCTCAATCAGCCCGTCTaGCTTCTTCTCATCCAGCCAGTTGCTGCAGGGGAA +
Preference number: 6 (lower is better)
Translates to: HHLIELPLNQPV*LLLIQPVAAGE
Trigger: TTCCCCTGCAGCAACTGGCTGGATGAGAAGAAGGCAGACGGGCTGATTGAGAGGCAGCTCTATGAGATGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp AACCATAGGTCCTGTCACCGTGTCGATGTCCACGTCTaGCATCTTGGAACTCAGGGCGATCTCCCAGAAGTC +
Preference number: 6 (lower is better)
Translates to: NHRSCHRVDVHV*HLGTQGDLPEV
Trigger: GACTTCTGGGAGATCGCCCTGAGTTCCAAGATGGCAGACGTGGACATCGACACGGTGACAGGACCTATGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp TGTCCTTGGACCCCCGATCAAACACTTTGGAACGGCTaGAGAGGAAGAGGACTTCGGTCTTGCCTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: CPWTPDQTLWNG*RGRGLRSCLLP
Trigger: GGGAAGAAGGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CATGTTCTTCAACAGGATCCTCTCCAGGAACCACTCTaGCCGGCTACCCATCCCATCAATGCGGATGCGCAT +
Preference number: 6 (lower is better)
Translates to: HVLQQDPLQEPL*PATHPINADAH
Trigger: ATGCGCATCCGCATTGATGGGATGGGTAGCCGGCCAGAGTGGTTCCTGGAGAGGATCCTGTTGAAGAACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp AGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTTaGCTGACTGCTTCAGGGCCAGGGTCCCACTGTCTC +
Preference number: 6 (lower is better)
Translates to: RCLCCSAQTCSS*LTASGPGSHCL
Trigger: GAGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp AAGGTATCTGTCTGGCCCTGCTCAAACTTGTTGGACTaGTCTGATTTCTTCAGGGGCCGCTCCCCCGTGTCC +
Preference number: 6 (lower is better)
Translates to: KVSVWPCSNLLD*SDFFRGRSPVS
Trigger: GGACACGGGGGAGCGGCCCCTGAAGAAATCAGACAAGTCCAACAAGTTTGAGCAGGGCCAGACAGATACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 90 bp ACGGCTTCCAGCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTaGGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTGCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: TASSWKMSLDPRSNT*ERLERKRTSVLPSS
Trigger: GGAAGAAGGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGCTGGAAGCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS TCA 72 bp TTCTCATCCAGCCAGTTGCTGCAGGGGAAAGTCTGCTaGATGCCAGTAAAGGGGCACAGGATCACCACCTTC +
Preference number: 6 (lower is better)
Translates to: FSSSQLLQGKVC*MPVKGHRITTF
Trigger: GAAGGTGGTGATCCTGTGCCCCTTTACTGGCATTCAGCAGACTTTCCCCTGCAGCAACTGGCTGGATGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp AGCCGTTCCTTTCTCAAACTTGTTGGTGCGGTTCTCTaGCTTGCCAAGGTATCGTTCCCCTGTGTCCCCGAG +
Preference number: 6 (lower is better)
Translates to: SRSFLKLVGAVL*LAKVSFPCVPE
Trigger: CTCGGGGACACAGGGGAACGATACCTTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAACGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp GCCAGATGCGGTTGGTGCATTCATCATCTTCCCCAATaGGCAAGACAAAGGCACGGCTATCAGTGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: ARCGWCIHHLPQ*ARQRHGYQWLP
Trigger: AGGCAGCCACTGATAGCCGTGCCTTTGTCTTGCTCATTGGGGAAGATGATGAATGCACCAACCGCATCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp GTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTTGGCTaGCTGCTTCAGGGCCAGGGTCCCACTGTCTCCATT +
Preference number: 6 (lower is better)
Translates to: VCVVPLKLVPVG*LLQGQGPTVSI
Trigger: AATGGAGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp GTGTTGTTCCGCTCAAACTTGTTCCAGTTGGCTGACTaGTTCAGGGCCAGGGTCCCACTGTCTCCATTTTCC +
Preference number: 6 (lower is better)
Translates to: VLFRSNLFQLAD*FRARVPLSPFS
Trigger: GGAAAATGGAGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp GAAAGAAGCGGTCTGTACTGCCCCTCTCGAAGAGGTTaGGCATTTTCTGTTTCAGTTCGCGCTTGCCCGTGT +
Preference number: 6 (lower is better)
Translates to: ERSGLYCPSRRG*AFSVSVRACPC
Trigger: ACACGGGCAAGCGCGAACTGAAACAGAAAATGCGCAACCTCTTCGAGAGGGGCAGTACAGACCGCTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp ACACATTGGCATCCGTGCCTGCCCCCAAGATGTCACTaGTCTTCACCGAGACTGTGTAAGATGTCCACTCCA +
Preference number: 6 (lower is better)
Translates to: THWHPCLPPRCH*SSPRLCKMSTP
Trigger: TGGAGTGGACATCTTACACAGTCTCGGTGAAGACCAGTGACATCTTGGGGGCAGGCACGGATGCCAATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp GATGGTCACAAAGACGTTGGCATCAGTACCCGCTCCTaGTTCGTAGCCTGTCGTCACGATGACCTCGTACTT +
Preference number: 6 (lower is better)
Translates to: DGHKDVGISTRS*FVACRHDDLVL
Trigger: AAGTACGAGGTCATCGTGACGACAGGCTACGAACCAGGAGCGGGTACTGATGCCAACGTCTTTGTGACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp GCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTTaGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: AGKCPWTPDQTL*NGWRGRGLRSC
Trigger: GCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 72 bp TGCATGCCCGTGCTGTCGTGCCCAATCACCAGCCTGTaGATGGTTCCAATGTTCAGCGTCTCCAGAGTAAAC +
Preference number: 6 (lower is better)
Translates to: CMPVLSCPITSL*MVPMFSVSRVN
Trigger: GTTTACTCTGGAGACGCTGAACATTGGAACCATCAACAGGCTGGTGATTGGGCACGACAGCACGGGCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp TCAAAGACACGGGAGGTGACACCATCGCCTCGGTCCTaGGCAAGCCAACAGTTGCAGCGTAATGTGTACTTG +
Preference number: 6 (lower is better)
Translates to: SKTREVTPSPRS*ASQQLQRNVYL
Trigger: CAAGTACACATTACGCTGCAACTGTTGGCTTGCCAAGGACCGAGGCGATGGTGTCACCTCCCGTGTCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CAA 72 bp AAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTaGGCTGACTGCTTCAGGGCCAGGGTCCCACTGTCT +
Preference number: 6 (lower is better)
Translates to: KVSVLFRSNLFQ*ADCFRARVPLS
Trigger: AGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GATCTCGTTGTTGGCACATGCGAAGTCTCGGAGTGTTaGTCTGTCACCTTCGCTCTTGGACAGCCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: DLVVGTCEVSEC*SVTFALGQPAV
Trigger: GACTGCTGGCTGTCCAAGAGCGAAGGTGACAGACAAACACTCCGAGACTTCGCATGTGCCAACAACGAGATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp AGAAAGAAGCGGTCTGTACTGCCCCTCTCGAAGAGGTaGCGCATTTTCTGTTTCAGTTCGCGCTTGCCCGTG +
Preference number: 6 (lower is better)
Translates to: RKKRSVLPLSKR*RIFCFSSRLPV
Trigger: CACGGGCAAGCGCGAACTGAAACAGAAAATGCGCAACCTCTTCGAGAGGGGCAGTACAGACCGCTTCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GGTGAAGGGGGCGATGTCCAGGATCTCCATGATGAAGGTGTCATTTaGTTCCCGCTCAAACCTGGCCTTCTTCTTGTCCAACTGCACCTC +
Preference number: 6 (lower is better)
Translates to: GEGGDVQDLHDEGVI*FPLKPGLLLVQLHL
Trigger: GAGGTGCAGTTGGACAAGAAGAAGGCCAGGTTTGAGCGGGAACAAAATGACACCTTCATCATGGAGATCCTGGACATCGCCCCCTTCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp CTCATCACGGATCTCGTTGTTGGCACATGCGAAGTCTCGGAGTGTTaGTCTGTCACCTTCGCTCTTGGACAGCCAGCAGTCACACTGGAA +
Preference number: 6 (lower is better)
Translates to: LITDLVVGTCEVSEC*SVTFALGQPAVTLE
Trigger: TTCCAGTGTGACTGCTGGCTGTCCAAGAGCGAAGGTGACAGACAAACACTCCGAGACTTCGCATGTGCCAACAACGAGATCCGTGATGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp CATCTGTCCCTGCACCACGAACATCCCCTGTGGCTGTaGCCACCTCATACACCTTGGCTTTGTAGTACTCAT +
Preference number: 6 (lower is better)
Translates to: HLSLHHEHPLWL*PPHTPWLCSTH
Trigger: ATGAGTACTACAAAGCCAAGGTGTATGAGGTGGTCACAGCCACAGGGGATGTTCGTGGTGCAGGGACAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp TCTCATCCGTCCTCCCCTTCTTCCCGTAAATCTGGATaGAGATGGGCGAGTTGGTGCCGGCTTTCTTCAGAT +
Preference number: 6 (lower is better)
Translates to: SHPSSPSSRKSG*RWASWCRLSSD
Trigger: ATCTGAAGAAAGCCGGCACCAACTCGCCCATCTTCATCCAGATTTACGGGAAGAAGGGGAGGACGGATGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp ATGGGAAGTAGTACGTGGTCTCGTTATTCACGTCGGTaGTGTCTACTCTGTCCAGGAACCAGCCTGGCCTGT +
Preference number: 6 (lower is better)
Translates to: MGSSTWSRYSRR*CLLCPGTSLAC
Trigger: ACAGGCCAGGCTGGTTCCTGGACAGAGTAGACATCACCGACGTGAATAACGAGACCACGTACTACTTCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp CGTTCTCTCTGGTTTCGCCCCCGTTGCCTGTTTCTATaGCAATCTCGTAGGTGGTCTCTTCCAGCTCATCAC +
Preference number: 6 (lower is better)
Translates to: RSLWFRPRCLFL*QSRRWSLPAHH
Trigger: GTGATGAGCTGGAAGAGACCACCTACGAGATTGTCATAGAAACAGGCAACGGGGGCGAAACCAGAGAGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CCCTTGTTGTTGTGGCCCACATTGATCTTCATCAGCTaGCCCAAATCCGGAGCGTCCAGTGTGAACTTGTCT +
Preference number: 6 (lower is better)
Translates to: PLLLWPTLIFIS*PKSGASSVNLS
Trigger: AGACAAGTTCACACTGGACGCTCCGGATTTGGGGCAGCTGATGAAGATCAATGTGGGCCACAACAACAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp TTCCTTTCTCAAACTTGTTGGTGCGGTTCTCTGACTTaGCAAGGTATCGTTCCCCTGTGTCCCCGAGGTCTC +
Preference number: 6 (lower is better)
Translates to: FLSQTCWCGSLT*QGIVPLCPRGL
Trigger: GAGACCTCGGGGACACAGGGGAACGATACCTTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CCATATTCCATCTCGGTGATGGTGATCGTCTTGACGTaGCAGACAAGCTCTCTCTTGGGAATGAACCGGTCC +
Preference number: 6 (lower is better)
Translates to: PYSISVMVIVLT*QTSSLLGMNRS
Trigger: GGACCGGTTCATTCCCAAGAGAGAGCTTGTCTGGCACGTCAAGACGATCACCATCACCGAGATGGAATATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CGAAGAGGTTGCGCATTTTCTGTTTCAGTTCGCGCTTaGCCGTGTCCCCATTTGCGCCAAAGATGGTCACAA +
Preference number: 6 (lower is better)
Translates to: RRGCAFSVSVRA*PCPHLRQRWSQ
Trigger: TTGTGACCATCTTTGGCGCAAATGGGGACACGGGCAAGCGCGAACTGAAACAGAAAATGCGCAACCTCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp ACCAGTGTACACCTTGATCTCGTATTTGTTTCCTCTTaGCATGTCCATGGGGTCGAAGCTGGCCAGCAGGTC +
Preference number: 6 (lower is better)
Translates to: TSVHLDLVFVSS*HVHGVEAGQQV
Trigger: GACCTGCTGGCCAGCTTCGACCCCATGGACATGCCAAGAGGAAACAAATACGAGATCAAGGTGTACACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp ATGCCACGCCCGAATCTTATAGAACCTGCCGAGATCTaGGAGCTCCATCCTGAACTTCTCAATGATGCCTGG +
Preference number: 6 (lower is better)
Translates to: MPRPNLIEPAEI*ELHPELLNDAW
Trigger: CCAGGCATCATTGAGAAGTTCAGGATGGAGCTCCCAGATCTCGGCAGGTTCTATAAGATTCGGGCGTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp TCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTTaGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: SGKCPWTPDQTL*NGWRGRGLRSC
Trigger: GCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CCA 72 bp AGGTGGTCTCTTCCAGCTCATCACGGATCTCGTTGTTaGCACATGCGAAGTCTCGGAGTGTTTGTCTGTCAC +
Preference number: 6 (lower is better)
Translates to: RWSLPAHHGSRC*HMRSLGVFVCH
Trigger: GTGACAGACAAACACTCCGAGACTTCGCATGTGCCAACAACGAGATCCGTGATGAGCTGGAAGAGACCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp GTCACGATGACCTCGTACTTGACTGGCACCAGGCTCTaGATCTTACTGGCGAAGCTCTCTGTCGTTTTCGTA +
Preference number: 6 (lower is better)
Translates to: VTMTSYLTGTRL*ILLAKLSVVFV
Trigger: TACGAAAACGACAGAGAGCTTCGCCAGTAAGATCCAGAGCCTGGTGCCAGTCAAGTACGAGGTCATCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp ACGTCAACGTTGGCTTTCTCGAAAGCAGACTCACTCTaGCTGGTGAGATGGAGCTTGGGAGAGAGCCCATTC +
Preference number: 6 (lower is better)
Translates to: TSTLAFSKADSL*LVRWSLGESPF
Trigger: GAATGGGCTCTCTCCCAAGCTCCATCTCACCAGCAAGAGTGAGTCTGCTTTCGAGAAAGCCAACGTTGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GTTGGGCCTTCTGCGGTCATCTCCCTCACGATCTCATaGTCATCTTCATTGGCATCCAGCCAGCGATTGCAA +
Preference number: 6 (lower is better)
Translates to: VGPSAVISLTIS*SSSLASSQRLQ
Trigger: TTGCAATCGCTGGCTGGATGCCAATGAAGATGACAATGAGATCGTGAGGGAGATGACCGCAGAAGGCCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GTCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTaGGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTG +
Preference number: 6 (lower is better)
Translates to: VWKMSLDPRSNT*ERLERKRTSVL
Trigger: CAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CAA 72 bp GTTCCTTTCTCAAACTTGTTGGTGCGGTTCTCTGACTaGCCAAGGTATCGTTCCCCTGTGTCCCCGAGGTCT +
Preference number: 6 (lower is better)
Translates to: VPFSNLLVRFSD*PRYRSPVSPRS
Trigger: AGACCTCGGGGACACAGGGGAACGATACCTTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp TCGAAGAGGTTGCGCATTTTCTGTTTCAGTTCGCGCTaGCCCGTGTCCCCATTTGCGCCAAAGATGGTCACA +
Preference number: 6 (lower is better)
Translates to: SKRLRIFCFSSR*PVSPFAPKMVT
Trigger: TGTGACCATCTTTGGCGCAAATGGGGACACGGGCAAGCGCGAACTGAAACAGAAAATGCGCAACCTCTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp AGCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTaGGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SWKMSLDPRSNT*ERLERKRTSVL
Trigger: CAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148341.9
CDS CAA 90 bp AGGTGTCCCAGGCTCAGCATGTCAGAAAAGTTGAAGGTGTCTGTGTaGTTCCGCTCAAACTTGTTCCAGTTGGCTGACTGCTTCAGGGCC +
Preference number: 6 (lower is better)
Translates to: RCPRLSMSEKLKVSV*FRSNLFQLADCFRA
Trigger: GGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTCTGACATGCTGAGCCTGGGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp AGCTCCATCCTGAACTTCTCAATGATGCCTGGCTTGAACCACTTGTaGTTGGGGTTCAGAAGAATCTCATCCGTCCTCCCCTTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: SSILNFSMMPGLNHL*LGFRRISSVLPFFP
Trigger: CGGGAAGAAGGGGAGGACGGATGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAGTTCAGGATGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GGGAGCTCCATCCTGAACTTCTCAATGATGCCTGGCTTGAACCACTaGTTGTTGGGGTTCAGAAGAATCTCATCCGTCCTCCCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: GSSILNFSMMPGLNH*LLGFRRISSVLPFF
Trigger: GAAGAAGGGGAGGACGGATGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAGTTCAGGATGGAGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp CTCCGCACAGTTGGGCCTTCTGCGGTCATCTCCCTCACGATCTCATaGTCATCTTCATTGGCATCCAGCCAGCGATTGCAATTGAAGTTA +
Preference number: 6 (lower is better)
Translates to: LRTVGPSAVISLTIS*SSSLASSQRLQLKL
Trigger: TAACTTCAATTGCAATCGCTGGCTGGATGCCAATGAAGATGACAATGAGATCGTGAGGGAGATGACCGCAGAAGGCCCAACTGTGCGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp AAGGTATCTGTCTGGAAAATGTCCTTGGACCCCCGATCAAACACTTaGGAACGGCTGGAGAGGAAGAGGACTTCGGTCTTGCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: KVSVWKMSLDPRSNT*ERLERKRTSVLPSS
Trigger: GGAAGAAGGCAAGACCGAAGTCCTCTTCCTCTCCAGCCGTTCCAAAGTGTTTGATCGGGGGTCCAAGGACATTTTCCAGACAGATACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
CDS CAA 90 bp GAAAAGTTGAAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTaGGCTGACTGCTTCAGGGCCAGGGTCCCACTGTCTCCATTTTCC +
Preference number: 6 (lower is better)
Translates to: EKLKVSVLFRSNLFQ*ADCFRARVPLSPFS
Trigger: GGAAAATGGAGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp AGCATGTCAGAAAAGTTGAAGGTGTCTGTGTTGTTCCGCTCAAACTaGTTCCAGTTGGCTGACTGCTTCAGGGCCAGGGTCCCACTGTCT +
Preference number: 6 (lower is better)
Translates to: SMSEKLKVSVLFRSN*FQLADCFRARVPLS
Trigger: AGACAGTGGGACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTCTGACATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp TTTCTGTTTCAGTTCGCGCTTGCCCGTGTCCCCATTTaGGCCAAAGATGGTCACAAAGACGTTGGCATCAGT +
Preference number: 6 (lower is better)
Translates to: FLFQFALARVPI*AKDGHKDVGIS
Trigger: ACTGATGCCAACGTCTTTGTGACCATCTTTGGCGCAAATGGGGACACGGGCAAGCGCGAACTGAAACAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GAAAAGTTGAAGGTGTCTGTGTTGTTCCGCTCAAACTaGTTCCAGTTGGCTGACTGCTTCAGGGCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: EKLKVSVLFRSN*FQLADCFRARV
Trigger: GACCCTGGCCCTGAAGCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp ACCCTCAGTTTGCAGAGGTGTCCCAGGCTCAGCATGTCAGAAAAGTaGAAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCCAGTTGGCT +
Preference number: 6 (lower is better)
Translates to: TLSLQRCPRLSMSEK*KVSVLFRSNLFQLA
Trigger: AGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTCTGACATGCTGAGCCTGGGACACCTCTGCAAACTGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp AAGAAGTACACATTGCCATATTCCATCTCGGTGATGGTGATCGTCTaGACGTGCCAGACAAGCTCTCTCTTGGGAATGAACCGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: KKYTLPYSISVMVIV*TCQTSSLLGMNRSS
Trigger: GGAGGACCGGTTCATTCCCAAGAGAGAGCTTGTCTGGCACGTCAAGACGATCACCATCACCGAGATGGAATATGGCAATGTGTACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp CTGTCCCTGCACCAATCACGTCACCAGTGTACACCTTaGTCTCGTATTTGTTTCCTCTTGGCATGTCCATGG +
Preference number: 6 (lower is better)
Translates to: LSLHQSRHQCTP*SRICFLLACPW
Trigger: CCATGGACATGCCAAGAGGAAACAAATACGAGATCAAGGTGTACACTGGTGACGTGATTGGTGCAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp TCTTCATCAGCTGCCCCAAATCCGGAGCGTCCAGTGTaGACTTGTCTTCAGCTCCCTTTTCAAAGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SSSAAPNPERPV*TCLQLPFQSCP
Trigger: AGGACAACTTTGAAAAGGGAGCTGAAGACAAGTTCACACTGGACGCTCCGGATTTGGGGCAGCTGATGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp TGCAGAGGTGTCCCAGGCTCAGCATGTCAGAAAAGTTaGAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTCC +
Preference number: 6 (lower is better)
Translates to: CRGVPGSACQKS*RCLCCSAQTCS
Trigger: GGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTCTGACATGCTGAGCCTGGGACACCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp GAAATATCCCTTTGTTGTCGTGCCAGACCCTCAGTTTaGAGAGGTGTCCCAGGCTCAGCATGTCAGAAAAGT +
Preference number: 6 (lower is better)
Translates to: EISLCCRARPSV*RGVPGSACQKS
Trigger: ACTTTTCTGACATGCTGAGCCTGGGACACCTCTGCAAACTGAGGGTCTGGCACGACAACAAAGGGATATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS GCA 72 bp CCAACTCTAACGTCTCCAGAAAGAAGCGGTCTGTACTaGCCCTCTCGAAGAGGTTGCGCATTTTCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: PTLTSPERSGLY*PSRRGCAFSVS
Trigger: TGAAACAGAAAATGCGCAACCTCTTCGAGAGGGGCAGTACAGACCGCTTCTTTCTGGAGACGTTAGAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CAGCCAGTTGTTGCAGTTGAAGTAGTAGCGGAGATGTaGCCTCTTCATGTCAGTCACTATAACTCGGTCCAG +
Preference number: 6 (lower is better)
Translates to: QPVVAVEVVAEM*PLHVSHYNSVQ
Trigger: CTGGACCGAGTTATAGTGACTGACATGAAGAGGCCACATCTCCGCTACTACTTCAACTGCAACAACTGGCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp CTCCCAAGAAGATGCTGTCAAACTCAAAGGTGTCTGTaGTCCCCTTCCGAAAGGCTCTCTGTCTGGAAGAAT +
Preference number: 6 (lower is better)
Translates to: LPRRCCQTQRCL*SPSERLSVWKN
Trigger: ATTCTTCCAGACAGAGAGCCTTTCGGAAGGGGACCACAGACACCTTTGAGTTTGACAGCATCTTCTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp CTGAACTTCTCAATGATGCCTGGCTTGAACCACTTGTaGTTGGGGTTCAGAAGAATCTCATCCGTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: LNFSMMPGLNHL*LGFRRISSVLP
Trigger: GGGGAGGACGGATGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GGCGATGTCCAGGATCTCCATGATGAAGGTGTCATTTaGTTCCCGCTCAAACCTGGCCTTCTTCTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: GDVQDLHDEGVI*FPLKPGLLLVQ
Trigger: TTGGACAAGAAGAAGGCCAGGTTTGAGCGGGAACAAAATGACACCTTCATCATGGAGATCCTGGACATCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GCGAAGCTCTCTGTCGTTTTCGTAACCTCAAATACCTaGAAGTACTTCCTCTTCCGCTTGAGGGGGATGAGG +
Preference number: 6 (lower is better)
Translates to: AKLSVVFVTSNT*KYFLFRLRGMR
Trigger: CCTCATCCCCCTCAAGCGGAAGAGGAAGTACTTCAAGGTATTTGAGGTTACGAAAACGACAGAGAGCTTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TTCCGAAAGGCTCTCTGTCTGGAAGAATTTTCCACAAGGAACTCCTaGGATCTGTTCTTCCTGCCCTCCAGTATGAGCCAGACGTTCTCT +
Preference number: 6 (lower is better)
Translates to: FRKALCLEEFSTRNS*DLFFLPSSMSQTFS
Trigger: AGAGAACGTCTGGCTCATACTGGAGGGCAGGAAGAACAGATCCAAGGAGTTCCTTGTGGAAAATTCTTCCAGACAGAGAGCCTTTCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp TCTGTCCCTGCACCAATCACGTCACCAGTGTACACCTaGATCTCGTATTTGTTTCCTCTTGGCATGTCCATG +
Preference number: 6 (lower is better)
Translates to: SVPAPITSPVYT*ISYLFPLGMSM
Trigger: CATGGACATGCCAAGAGGAAACAAATACGAGATCAAGGTGTACACTGGTGACGTGATTGGTGCAGGGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp AACTTCTCAATGATGCCTGGCTTGAACCACTTGTTGTaGGGGTTCAGAAGAATCTCATCCGTCCTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: NFSMMPGLNHLL*GFRRISSVLPF
Trigger: GAAGGGGAGGACGGATGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp AGGCTCAGCATGTCAGAAAAGTTGAAGGTGTCTGTGTaGTTCCGCTCAAACTTGTTCCAGTTGGCTGACTGC +
Preference number: 6 (lower is better)
Translates to: RLSMSEKLKVSV*FRSNLFQLADC
Trigger: GCAGTCAGCCAACTGGAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTCTGACATGCTGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp TTGCAGAGGTGTCCCAGGCTCAGCATGTCAGAAAAGTaGAAGGTGTCTGTGTTGTTCCGCTCAAACTTGTTC +
Preference number: 6 (lower is better)
Translates to: LQRCPRLSMSEK*KVSVLFRSNLF
Trigger: GAACAAGTTTGAGCGGAACAACACAGACACCTTCAACTTTTCTGACATGCTGAGCCTGGGACACCTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp ACATTGCCATATTCCATCTCGGTGATGGTGATCGTCTaGACGTGCCAGACAAGCTCTCTCTTGGGAATGAAC +
Preference number: 6 (lower is better)
Translates to: TLPYSISVMVIV*TCQTSSLLGMN
Trigger: GTTCATTCCCAAGAGAGAGCTTGTCTGGCACGTCAAGACGATCACCATCACCGAGATGGAATATGGCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TCATCCAGCGCCAGCCAGCGGTTAAGGGGGAAGTCGTATTTCCTTTaGTTTCCAATATCTTCAATGATGATCTTGGACAGGAACCAGCCT +
Preference number: 6 (lower is better)
Translates to: SSSASQRLRGKSYFL*FPISSMMILDRNQP
Trigger: AGGCTGGTTCCTGTCCAAGATCATCATTGAAGATATTGGAAACAAAAGGAAATACGACTTCCCCCTTAACCGCTGGCTGGCGCTGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp ATCTTACTGGCGAAGCTCTCTGTCGTTTTCGTAACCTCAAATACCTaGAAGTACTTCCTCTTCCGCTTGAGGGGGATGAGGCAATCACAG +
Preference number: 6 (lower is better)
Translates to: ILLAKLSVVFVTSNT*KYFLFRLRGMRQSQ
Trigger: CTGTGATTGCCTCATCCCCCTCAAGCGGAAGAGGAAGTACTTCAAGGTATTTGAGGTTACGAAAACGACAGAGAGCTTCGCCAGTAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CCA 72 bp ATCTGGGAGCTCCATCCTGAACTTCTCAATGATGCCTaGCTTGAACCACTTGTTGTTGGGGTTCAGAAGAAT +
Preference number: 6 (lower is better)
Translates to: IWELHPELLNDA*LEPLVVGVQKN
Trigger: ATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAGTTCAGGATGGAGCTCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp ATCCTGAACTTCTCAATGATGCCTGGCTTGAACCACTaGTTGTTGGGGTTCAGAAGAATCTCATCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: ILNFSMMPGLNH*LLGFRRISSVL
Trigger: GAGGACGGATGAGATTCTTCTGAACCCCAACAACAAGTGGTTCAAGCCAGGCATCATTGAGAAGTTCAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp TCAATGATGAAGGTGTCAGCCGTTCCTTTCTCAAACTaGTTGGTGCGGTTCTCTGACTTGCCAAGGTATCGT +
Preference number: 6 (lower is better)
Translates to: SMMKVSAVPFSN*LVRFSDLPRYR
Trigger: ACGATACCTTGGCAAGTCAGAGAACCGCACCAACAAGTTTGAGAAAGGAACGGCTGACACCTTCATCATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GGGCCTTCTGCGGTCATCTCCCTCACGATCTCATTGTCATCTTCATaGGCATCCAGCCAGCGATTGCAATTGAAGTTATATTTATCCTTA +
Preference number: 6 (lower is better)
Translates to: GPSAVISLTISLSSS*ASSQRLQLKLYLSL
Trigger: TAAGGATAAATATAACTTCAATTGCAATCGCTGGCTGGATGCCAATGAAGATGACAATGAGATCGTGAGGGAGATGACCGCAGAAGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GCGGTCATCTCCCTCACGATCTCATTGTCATCTTCATaGGCATCCAGCCAGCGATTGCAATTGAAGTTATAT +
Preference number: 6 (lower is better)
Translates to: AVISLTISLSSS*ASSQRLQLKLY
Trigger: ATATAACTTCAATTGCAATCGCTGGCTGGATGCCAATGAAGATGACAATGAGATCGTGAGGGAGATGACCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp GTCGTTTTCGTAACCTCAAATACCTTGAAGTACTTCCTCTTCCGCTaGAGGGGGATGAGGCAATCACAGTTAAAGAAGTACACATTGCCA +
Preference number: 6 (lower is better)
Translates to: VVFVTSNTLKYFLFR*RGMRQSQLKKYTLP
Trigger: TGGCAATGTGTACTTCTTTAACTGTGATTGCCTCATCCCCCTCAAGCGGAAGAGGAAGTACTTCAAGGTATTTGAGGTTACGAAAACGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 72 bp GTAACCTCAAATACCTTGAAGTACTTCCTCTTCCGCTaGAGGGGGATGAGGCAATCACAGTTAAAGAAGTAC +
Preference number: 6 (lower is better)
Translates to: VTSNTLKYFLFR*RGMRQSQLKKY
Trigger: GTACTTCTTTAACTGTGATTGCCTCATCCCCCTCAAGCGGAAGAGGAAGTACTTCAAGGTATTTGAGGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TCCACAGTGAAGATTTCAATGCTGTCCCTTTCAAATTTGTCACTGTaGGTTTTGGAGGACTTCAGGAGGGTCATTCCGTTGTTATCTTGG +
Preference number: 6 (lower is better)
Translates to: STVKISMLSLSNLSL*VLEDFRRVIPLLSW
Trigger: CCAAGATAACAACGGAATGACCCTCCTGAAGTCCTCCAAAACCAACAGTGACAAATTTGAAAGGGACAGCATTGAAATCTTCACTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS TCA 72 bp CTTGTCTTAAGGATCCATCTTTCATATACTTCTCAGTaGAGATGTCATAAGGGACCAGTTCTCGGATGGTCT +
Preference number: 6 (lower is better)
Translates to: LVLRIHLSYTSQ*RCHKGPVLGWS
Trigger: AGACCATCCGAGAACTGGTCCCTTATGACATCTTCACTGAGAAGTATATGAAAGATGGATCCTTAAGACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TTGGCATCCAGCCAGCGATTGCAATTGAAGTTATATTTATCCTTATaGATGGTATTCATCAGAGTCATCTTTTCTAAATGCCACCCAGAG +
Preference number: 6 (lower is better)
Translates to: LASSQRLQLKLYLSL*MVFIRVIFSKCHPE
Trigger: CTCTGGGTGGCATTTAGAAAAGATGACTCTGATGAATACCATCAATAAGGATAAATATAACTTCAATTGCAATCGCTGGCTGGATGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp TCCCTCACGATCTCATTGTCATCTTCATTGGCATCCAGCCAGCGATaGCAATTGAAGTTATATTTATCCTTATTGATGGTATTCATCAGA +
Preference number: 6 (lower is better)
Translates to: SLTISLSSSLASSQR*QLKLYLSLLMVFIR
Trigger: TCTGATGAATACCATCAATAAGGATAAATATAACTTCAATTGCAATCGCTGGCTGGATGCCAATGAAGATGACAATGAGATCGTGAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9
CDS CAA 90 bp ACGATCTCATTGTCATCTTCATTGGCATCCAGCCAGCGATTGCAATaGAAGTTATATTTATCCTTATTGATGGTATTCATCAGAGTCATC +
Preference number: 6 (lower is better)
Translates to: TISLSSSLASSQRLQ*KLYLSLLMVFIRVI
Trigger: GATGACTCTGATGAATACCATCAATAAGGATAAATATAACTTCAATTGCAATCGCTGGCTGGATGCCAATGAAGATGACAATGAGATCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000096547.11
ENSMUST00000123410.9
ENSMUST00000148341.9