Pregenerated sensors for LONRF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016239Ensembl transcript IDs: ENSMUST00000016383.10, ENSMUST00000126147.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CATTTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGATGTTTACAAGAACATaGCCTCGGGGCAGTGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HFCVVKKNNNIYLGYSLLMFTRT*PRGSGE Trigger: CTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACAT...CAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCTCTTCCACAATCCAGTCCCGAGGCCAGCTCCTCTTaGGGGACACTGTCGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCLGAVERVEIPLPQSSPEASSS*GTLSAK Trigger: CTTGGCCGACAGTGTCCCGCAAGAGGAGCTGGCCTC...GGGACTGGATTGTGGAAGAGGAATTTCTACCCTCTCCACTGCCCCGAGGCAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCTCTTCCACAATCCAGTCCCGCCAAGGCATCCGCCTaGGTGAGCAGGACTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HCLGAVERVEIPLPQSSPAKASA*VSRTLH Trigger: GTGCAAAGTCCTGCTCACGCAGGCGGATGCCTTGGC...GGGACTGGATTGTGGAAGAGGAATTTCTACCCTCTCCACTGCCCCGAGGCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCAGCCGGTTGCCCTCGTaGCGGAGTTGCGACGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSSRLPS*RSCDAR Trigger: GCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCT...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCCGCGGAACAGCCGGTTaGCCTCGTGCCGGAGTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSRGTAG*PRAGVA Trigger: CGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCG...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCGGCATTTGCCGGTCCTaGCGGAGGCAGCATCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVGICRS*RRQHPG Trigger: ACCGGGATGCTGCCTCCGTCAGGACCGGCAAATGCC...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCAGGCATCCGCCTGCGTaGGCAGGACTTTGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSRHPPA*AGLCTP Trigger: TGGAGTGCAAAGTCCTGCTCACGCAGGCGGATGCCT...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | CATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCTCTTCCACAATCCAGTCCCATTCTACAAACCCTTTaGCAGGATCTCCAAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HCLGAVERVEIPLPQSSPILQTL*QDLQGT Trigger: TGTGCCTTGGAGATCCTGTCAAAGGGTTTGTAGAAT...GGGACTGGATTGTGGAAGAGGAATTTCTACCCTCTCCACTGCCCCGAGGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCACTAGCTGCTCCAGCTaGTCCGCTACGAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSTSCSS*SATSCC Trigger: GCAGCAGCTCGTAGCGGAGCAGCTGGAGCAGCTAGT...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCTCTTCCACAATCCAGTCCCGCATTCAAGGTCAGATaGATCAAAGGATCCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCLGAVERVEIPLPQSSPAFKVR*IKGSKW Trigger: CCACTTGGATCCTTTGATGCATCTGACCTTGAATGC...GGGACTGGATTGTGGAAGAGGAATTTCTACCCTCTCCACTGCCCCGAGGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTCTTTGCTCGGGCTCTTaGGCCCCGAGAGCTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCLCSGS*APRAWE Trigger: CTCCCAAGCTCTCGGGGCTCAAGAGCCCGAGCAAAG...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCTGCTCCGCTACGAGCTaGTGCCTCTCGGAGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVCSATS*CLSESC Trigger: ACAGCTCTCCGAGAGGCAGCAGCTCGTAGCGGAGCA...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTGCTGCCTCCACCTGGTaGTCGCGGAACAGCCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSAASTW*SRNSRL Trigger: CAACCGGCTGTTCCGCGAGCACCAGGTGGAGGCAGC...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | CATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCTCTTCCACAATCCAGTCCCTTCCTTGAATTCTTCTaGCAGGAACGTAGCTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HCLGAVERVEIPLPQSSPFLEFF*QERSYE Trigger: CTCATAGCTACGTTCCTGCCAGAAGAATTCAAGGAA...GGGACTGGATTGTGGAAGAGGAATTTCTACCCTCTCCACTGCCCCGAGGCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGTACTTGAGCAGAGCTaGCTCCACCTGGTGCTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCVLEQS*LHLVLA Trigger: CGCGAGCACCAGGTGGAGGCAGCTCTGCTCAAGTAC...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTAGAGCTGCCTCCACCTaGTGCTCGCGGAACAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FKKHLKTVSQTGHILLVFRAAST*CSRNSR Trigger: CCGGCTGTTCCGCGAGCACCAGGTGGAGGCAGCTCT...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTATCTCTGCTTGACATTTCAACCACACACTCATTTAGCTATGAACAACAATCAGAGCGGAGAGCTTaGCCCCGCACAGAGCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLDISTTHSFSYEQQSERRA*PRTERS Trigger: GCTGCGCTCTGTGCGGGGTCAAGCTCTCCGCTCTGA...TTGTTGTTCATAGCTAAATGAGTGTGTGGTTGAAATGTCAAGCAGAGATACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCGCTAGGAAGGGAAGCTaGGCTCTGCTTTCCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVARKGS*ALLSRG Trigger: TCCTCTGGAAAGCAGAGCTCAGCTTCCCTTCCTAGC...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTTCCGCTACGAGCTGCTaGCTCTCGGAGAGCTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FKKHLKTVSQTGHILLVFSATSC*LSESCR Trigger: CCGACAGCTCTCCGAGAGGCAGCAGCTCGTAGCGGA...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTAAGCAGCGCACTAGCTaGTCCAGCTGCTCCGCTACG | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSKQRTS*SSCSAT Trigger: CGTAGCGGAGCAGCTGGAGCAGCTAGTGCGCTGCTT...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTCAGCCTCGTTGTACTTaGGCAGAGCTGCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSQPRCT*AELPPP Trigger: AGGTGGAGGCAGCTCTGCTCAAGTACAACGAGGCTG...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTCCACCAGCACCAGGCTaGACCATTCGGATTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCPPAPG*TIRINL Trigger: CAGGTTAATCCGAATGGTCCAGCCTGGTGCTGGTGG...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCCTCTTCTGCAGCTGCTaGTCCCTCCTGATTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVLFCSC*SLLIRT Trigger: TGTTCTAATCAGGAGGGAGCAGCAGCTGCAGAAGAG...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CATTTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGAGCGCCTCTTGCCTATaGTGTCTACCACCGATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFCVVKKNNNIYLGYSLLSASCL*CLPPIG Trigger: GCCGATCGGTGGTAGACAGCATAGGCAAGAGGCGCT...CAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTAGGGAAGCTGAGCTCTaGTTTCCAGAGGAAGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCREAEL*FPEEEP Trigger: CGGTTCTTCCTCTGGAAAGCAGAGCTCAGCTTCCCT...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTAGGGACAAGGAACGGTaGGATAGGCCATGGTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSRDKER*DRPWCT Trigger: TGTGCACCATGGCCTATCCCACCGTTCCTTGTCCCT...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCGTCCACAAGGTGTTGTaGCTGGCTCATAGAATAATC | + |
|
Preference number: 4 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSVHKVL*LAHRII Trigger: GATTATTCTATGAGCCAGTCACAACACCTTGTGGAC...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTCAAGGCTCAAAGATGTaGAAGGGACAAGGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCQGSKM*KGQGTV Trigger: CACCGTTCCTTGTCCCTTGCACATCTTTGAGCCTTG...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCTTTCTCTTCTTTTCCTaGCATTTGCCGGTCCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVFLFFS*HLPVLT Trigger: CGTCAGGACCGGCAAATGCCAGGAAAAGAAGAGAAA...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCCATGAGACTCCAAGGTaGAATAAATTTGGGACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSHETPR*NKFGTD Trigger: ATCGGTCCCAAATTTATTTCACCTTGGAGTCTCATG...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTTCCAGATTCTCCCTTTaGGCTTCAGATCTGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKKHLKTVSQTGHILLVFSRFSL*ASDLAL Trigger: GAGCGCCAGATCTGAAGCTCAAAGGGAGAATCTGGA...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGTTACCTGATGGAGCACTTTaGAGCGCCTCTTGCCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FCVVKKNNNIYLGYSLLLPDGAL*SASCLC Trigger: GCATAGGCAAGAGGCGCTTCAAAGTGCTCCATCAGG...TAACAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCTGCTTTTCTGAAGTGTaGCTTAAAACCCATTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVCFSEV*LKTHWP Trigger: CGGCCAATGGGTTTTAAGGCACACTTCAGAAAAGCA...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CATTTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGCGGAATTTGCTAGGCTaGTGCTCTCTTCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HFCVVKKNNNIYLGYSLLRNLLG*CSLLQL Trigger: CAGCTGCAGAAGAGAGCAGCAGCCTAGCAAATTCCG...CAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTGATCTCCAAGGCACATaGCAAACTGTCTTGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSDLQGT*QTVLCL Trigger: CAGGCACAAGACAGTTTGGCATGTGCCTTGGAGATC...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | CATTTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGAGTTTACAAAAGGTGTaGCCGCACCACAGGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: HFCVVKKNNNIYLGYSLLSLQKV*PHHRDT Trigger: GGTGTCCCTGTGGTGCGGCCACACCTTTTGTAAACT...CAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCTCACCTTGCCTAGAGTaGCTAAAGCTTGTGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVSPCLE*LKLVLF Trigger: GAAAAGCACAAGCTTTAGCCACTCTAGGCAAGGTGA...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTTCTTCAGAGATGCTTTaGGCGAGTGAAACCATGATG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCSSEML*ASETMM Trigger: CATCATGGTTTCACTCGCTCAAAGCATCTCTGAAGA...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTTCTGGTTTGGCTCCCTaGTCAGCAGGAAAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSSGLAP*SAGKSC Trigger: ACAAGATTTTCCTGCTGAGCAGGGAGCCAAACCAGA...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCAATTCTGTGTCTTCTTaGGTTTCGATTTGGCAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSNSVSS*VSIWQR Trigger: TCGTTGCCAAATCGAAACCCAAGAAGACACAGAATT...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGTCTTCGTCCTTCTCTaGCATTGGACCAAAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCVFVLL*HWTKVI Trigger: AATCACTTTGGTCCAATGCCAGAGAAGGACGAAGAC...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTGTGCTTCTTTCACCTTaGCTAGAGTGGCTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSVLLSP*LEWLKL Trigger: AAGCTTTAGCCACTCTAGGCAAGGTGAAAGAAGCAC...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTAGAATTGGACATTTCTaGTCTCTAAGATGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCRIGHF*SLRCSH Trigger: ATGGCTGCATCTTAGAGATCAGAAATGTCCAATTCT...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTGGCATTGGACCAAAGTaGTTTAGTATCCGATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSGIGPK*FSIRFF Trigger: GAAGAATCGGATACTAAATCACTTTGGTCCAATGCC...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCAAATTTGGGACCGATTaGTATAAAGCAAATGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSQTGHILLVFLPHFCVVKFGTD*YKANGR Trigger: ACGACCATTTGCTTTATAGCAATCGGTCCCAAATTT...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTTTTGAGCTTCAGATCTaGCGCTCTTGTTCTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSFELQI*RSCSFH Trigger: ATGGAAAGAACAAGAGCGCCAGATCTGAAGCTCAAA...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | TTAGTATCTCTGCTTGACATTTCAACCACACACTCATTTAGCTATGAACAACAATGCCAAACTGTCTTGTaGCTGTCTCAATACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLLDISTTHSFSYEQQCQTVL*LSQYIS Trigger: GGAGATGTATTGAGACAGGCACAAGACAGTTTGGCA...TTGTTGTTCATAGCTAAATGAGTGTGTGGTTGAAATGTCAAGCAGAGATACTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTATCAAAGGATCCAAGTaGATTACTGAGATCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSIKGSK*ITEIWF Trigger: AAACCAGATCTCAGTAATCCACTTGGATCCTTTGAT...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTAACGTCTTTGCACAGTaGACACTTTGCATTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: FKKHLKTVSQTGHILLVFNVFAQ*TLCIMI Trigger: GATCATAATGCAAAGTGTCCACTGTGCAAAGACGTT...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTCCATCAGAAAAGAATTaGACATTTCTGATCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCPSEKN*TFLISK Trigger: CTTAGAGATCAGAAATGTCCAATTCTTTTCTGATGG...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGTTAAGTAGAGAAATTCTTTaGGTGCTTCTTTCACCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FCVVKKNNNIYLGYSLLLSREIL*VLLSPC Trigger: GCAAGGTGAAAGAAGCACTCAAAGAATTTCTCTACT...TAACAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR GCA 90 bp | TTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGTTAGTAAAAGAACGTCTTTaGACAGTGGACACTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FCVVKKNNNIYLGYSLLLVKERL*TVDTLH Trigger: ATGCAAAGTGTCCACTGTGCAAAGACGTTCTTTTAC...TAACAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CCA 90 bp | TTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGTTATCTTGGGTTTCGATTTaGCAACGATTTCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCVVKKNNNIYLGYSLLLSWVSI*QRFLFF Trigger: AAAGAAGAGAAATCGTTGCCAAATCGAAACCCAAGA...TAACAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | GCGGCCCGCGTGCCCTCCCACTGGCCGCCATCAGAGCGGAGAGCTTaGCCCCGCACAGAGCGCAGCGCCGATCGGCGGCTCGCCCGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AARVPSHWPPSERRA*PRTERSADRRLARA Trigger: AGCGCGGGCGAGCCGCCGATCGGCGCTGCGCTCTGTGCGGGGTCAAGCTCTCCGCTCTGATGGCGGCCAGTGGGAGGGCACGCGGGCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | AGGCCGCTGAGTACCACGTTAACTCGCAGTTGCAGGGGCGCCGGCTaGCCCGCGCGCCGCGGCCCGCGTGCCCTCCCACTGGCCGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RPLSTTLTRSCRGAG*PARRGPRALPLAAI Trigger: GATGGCGGCCAGTGGGAGGGCACGCGGGCCGCGGCGCGCGGGGCAGCCGGCGCCCCTGCAACTGCGAGTTAACGTGGTACTCAGCGGCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | TCCACCTGGTGCTCGCGGAACAGCCGGTTGCCCTCGTGCCGGAGTTaGGACGCCCGCGCGGGGCCCGGGAACAACTTGCCCAGGAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: STWCSRNSRLPSCRS*DARAGPGNNLPRRP Trigger: CGGCCTCCTGGGCAAGTTGTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCACCAGGTGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS GCA 90 bp | AGAGCTGCCTCCACCTGGTGCTCGCGGAACAGCCGGTTGCCCTCGTaGCGGAGTTGCGACGCCCGCGCGGGGCCCGGGAACAACTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RAASTWCSRNSRLPS*RSCDARAGPGNNLP Trigger: GGGCAAGTTGTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCACCAGGTGGAGGCAGCTCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS TCA 90 bp | TCCAGCGGTGTCGGGACCGCCAGAGGCAGGCTTTGCTCGGGCTCTTaGGCCCCGAGAGCTTGGGAGCCCTCGGGTGTCACCTCCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGVGTARGRLCSGS*APRAWEPSGVTSSG Trigger: CCCGGAGGAGGTGACACCCGAGGGCTCCCAAGCTCTCGGGGCTCAAGAGCCCGAGCAAAGCCTGCCTCTGGCGGTCCCGACACCGCTGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | GCGCAGCAGCTCGAAGTGCCGCTCGAGTCGGAGGCCAGCTCCTCTTaGGGGACACTGTCGGCCAAGCAGCGCACTAGCTGCTCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQQLEVPLESEASSS*GTLSAKQRTSCSSC Trigger: GCAGCTGGAGCAGCTAGTGCGCTGCTTGGCCGACAGTGTCCCGCAAGAGGAGCTGGCCTCCGACTCGAGCGGCACTTCGAGCTGCTGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | GGGCTTCCCGAAGGTGCCCCTCAGATGCCAAGGCATCCGCCTGCGTaGGCAGGACTTTGCACTCCAGCGGTGTCGGGACCGCCAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLPEGAPQMPRHPPA*AGLCTPAVSGPPEA Trigger: TGCCTCTGGCGGTCCCGACACCGCTGGAGTGCAAAGTCCTGCTCACGCAGGCGGATGCCTTGGCATCTGAGGGGCACCTTCGGGAAGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | TCGAGGGCTTCCCGAAGGTGCCCCTCAGATGCCAAGGCATCCGCCTaGGTGAGCAGGACTTTGCACTCCAGCGGTGTCGGGACCGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRASRRCPSDAKASA*VSRTLHSSGVGTAR Trigger: TCTGGCGGTCCCGACACCGCTGGAGTGCAAAGTCCTGCTCACGCAGGCGGATGCCTTGGCATCTGAGGGGCACCTTCGGGAAGCCCTCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | GCCAGCTCCTCTTGCGGGACACTGTCGGCCAAGCAGCGCACTAGCTaGTCCAGCTGCTCCGCTACGAGCTGCTGCCTCTCGGAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASSSCGTLSAKQRTS*SSCSATSCCLSESC Trigger: ACAGCTCTCCGAGAGGCAGCAGCTCGTAGCGGAGCAGCTGGAGCAGCTAGTGCGCTGCTTGGCCGACAGTGTCCCGCAAGAGGAGCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | GAGCTGTCGGTACACCTCGAGGGCTTCCCGAAGGTGCCCCTCAGATaGCAAGGCATCCGCCTGCGTGAGCAGGACTTTGCACTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ELSVHLEGFPKVPLR*QGIRLREQDFALQR Trigger: CCGCTGGAGTGCAAAGTCCTGCTCACGCAGGCGGATGCCTTGGCATCTGAGGGGCACCTTCGGGAAGCCCTCGAGGTGTACCGACAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | TCTTGCGGGACACTGTCGGCCAAGCAGCGCACTAGCTGCTCCAGCTaGTCCGCTACGAGCTGCTGCCTCTCGGAGAGCTGTCGGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: SCGTLSAKQRTSCSS*SATSCCLSESCRYT Trigger: GGTGTACCGACAGCTCTCCGAGAGGCAGCAGCTCGTAGCGGAGCAGCTGGAGCAGCTAGTGCGCTGCTTGGCCGACAGTGTCCCGCAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | TGCCTCTCGGAGAGCTGTCGGTACACCTCGAGGGCTTCCCGAAGGTaGCCCTCAGATGCCAAGGCATCCGCCTGCGTGAGCAGGACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSESCRYTSRASRR*PSDAKASACVSRTL Trigger: CAAAGTCCTGCTCACGCAGGCGGATGCCTTGGCATCTGAGGGGCACCTTCGGGAAGCCCTCGAGGTGTACCGACAGCTCTCCGAGAGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | AAGGTGTGGCCGCACCACAGGGACACCGGGTCTGAGAGAAACCCGTaGCACTTCTTGCACTTAAAGCCATCCCATACCTCGGGGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: KVWPHHRDTGSERNP*HFLHLKPSHTSGAT Trigger: CGTGGCCCCCGAGGTATGGGATGGCTTTAAGTGCAAGAAGTGTCACGGGTTTCTCTCAGACCCGGTGTCCCTGTGGTGCGGCCACACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | AAAGCAAATGGTCGTTTGGAGCTAGACGAACAGCCTCGTTGTACTTaGGCAGAGCTGCCTCCACCTGGTGCTCGCGGAACAGCCGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KANGRLELDEQPRCT*AELPPPGARGTAGC Trigger: GCAACCGGCTGTTCCGCGAGCACCAGGTGGAGGCAGCTCTGCTCAAGTACAACGAGGCTGTTCGTCTAGCTCCAAACGACCATTTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS CCA 90 bp | TCTGCTTTCCAGAGGAAGAACCGCCAGTGTCCACCAGCACCAGGCTaGACCATTCGGATTAACCTGGGGGTCTTCGTCCTTCTCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SAFQRKNRQCPPAPG*TIRINLGVFVLLWH Trigger: ATGCCAGAGAAGGACGAAGACCCCCAGGTTAATCCGAATGGTCCAGCCTGGTGCTGGTGGACACTGGCGGTTCTTCCTCTGGAAAGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | TGTCAGCAGTGTTGTAGCCATCCCGTTGACCCTGATGGAGCACTTTaGAGCGCCTCTTGCCTATGCTGTCTACCACCGATCGGCCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: CQQCCSHPVDPDGAL*SASCLCCLPPIGHQ Trigger: CTGATGGCCGATCGGTGGTAGACAGCATAGGCAAGAGGCGCTTCAAAGTGCTCCATCAGGGTCAACGGGATGGCTACAACACTGCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 90 bp | ATCTGTCCTTTAAGGACCTCATTGCTAGGAAGGGAAGCTGAGCTCTaGTTTCCAGAGGAAGAACCGCCAGTGTCCACCAGCACCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ICPLRTSLLGREAEL*FPEEEPPVSTSTRL Trigger: CAGCCTGGTGCTGGTGGACACTGGCGGTTCTTCCTCTGGAAAGCAGAGCTCAGCTTCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | GCACAGTTTACAAAAGGTGTGGCCGCACCACAGGGACACCGGGTCTaGGAGAAACCCGTGACACTTCTTGCACTTAAAGCCATCCCATAC | + |
|
Preference number: 5 (lower is better) Translates to: AQFTKGVAAPQGHRV*EKPVTLLALKAIPY Trigger: GTATGGGATGGCTTTAAGTGCAAGAAGTGTCACGGGTTTCTCTCAGACCCGGTGTCCCTGTGGTGCGGCCACACCTTTTGTAAACTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCTCGCGGAACAGCCGGTaGCCCTCGTGCCGGAGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSQTGHILLVFLPHFCVVSRNSR*PSCRSC Trigger: GCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGA...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | CGATTTGGCAACGATTTCTCTTCTTTTCCTGGCATTTGCCGGTCCTaGCGGAGGCAGCATCCCGGTCCTCTCCTTCCTGATCTTTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RFGNDFSSFPGICRS*RRQHPGPLLPDLSF Trigger: GAAAGAAAGATCAGGAAGGAGAGGACCGGGATGCTGCCTCCGTCAGGACCGGCAAATGCCAGGAAAAGAAGAGAAATCGTTGCCAAATCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCATCAGAGCGGAGAGCTaGACCCCGCACAGAGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSIRAES*TPHRAQ Trigger: CTGCGCTCTGTGCGGGGTCAAGCTCTCCGCTCTGAT...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | CATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCTCTTCCACAATCCAGTCCCTCAGATCTGGCGCTCTaGTTCTTTCCATCAAGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HCLGAVERVEIPLPQSSPSDLAL*FFPSRD Trigger: ATCCCTTGATGGAAAGAACAAGAGCGCCAGATCTGA...GGGACTGGATTGTGGAAGAGGAATTTCTACCCTCTCCACTGCCCCGAGGCAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCGCTTTGCTCGGGCTCTaGAGCCCCGAGAGCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSQTGHILLVFLPHFCVVALLGL*SPESLG Trigger: TCCCAAGCTCTCGGGGCTCAAGAGCCCGAGCAAAGC...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCGCCAGAGGCAGGCTTaGCTCGGGCTCTTGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FKKHLKTVSQTGHILLVFRQRQA*LGLLSP Trigger: GGGGCTCAAGAGCCCGAGCAAAGCCTGCCTCTGGCG...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | CATTTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGGGGCCCGGGAACAACTaGCCCAGGAGGCCGCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFCVVKKNNNIYLGYSLLGPGNN*PRRPLS Trigger: ACTCAGCGGCCTCCTGGGCAAGTTGTTCCCGGGCCC...CAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGTTATCCGCCAGCTCCAAGTaGTTGCTGCCGAGCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FCVVKKNNNIYLGYSLLLSASSK*LLPSSA Trigger: CGCCGAGCTCGGCAGCAACAACTTGGAGCTGGCGGA...TAACAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | GTGAGCATTCAAGGTCAGATGCATCAAAGGATCCAAGTGGATTACTaGGATCTGGTTTGGCTCCCTGCTCAGCAGGAAAATCTTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSIQGQMHQRIQVDY*DLVWLPAQQENLVW Trigger: CCAAACAAGATTTTCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAATCCACTTGGATCCTTTGATGCATCTGACCTTGAATGCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CCA 90 bp | CAATGGGGAAGCTCCAGATTCTCCTGTGACAACTTTGGTAGATTATaGCTGGTGCCTTCAGTAGCCATTGACTCTACGTGTTCCTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: QWGSSRFSCDNFGRL*LVPSVAIDSTCSFN Trigger: ATTAAAGGAACACGTAGAGTCAATGGCTACTGAAGGCACCAGCCATAATCTACCAAAGTTGTCACAGGAGAATCTGGAGCTTCCCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126147.2 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTACAGCCTCGTTGTACTaGAGCAGAGCTGCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FKKHLKTVSQTGHILLVFTASLY*SRAAST Trigger: GGTGGAGGCAGCTCTGCTCAAGTACAACGAGGCTGT...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTAGATATGTTTACAAGAACATTGCCTCGGGGCAGTGGAGAGGGTAGAAATTCCAGCCTCTTTCGTTCCTaGAATTCTTCTGGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LDMFTRTLPRGSGEGRNSSLFRS*NSSGRN Trigger: GTTCCTGCCAGAAGAATTCAAGGAACGAAAGAGGCT...GGAATTTCTACCCTCTCCACTGCCCCGAGGCAATGTTCTTGTAAACATATCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | CGCTCTTGTTCTTTCCATCAAGGGATACGCAGTAGAGAAATTCTTTaGGTGCTTCTTTCACCTTGCCTAGAGTGGCTAAAGCTTGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSCSFHQGIRSREIL*VLLSPCLEWLKLVL Trigger: AAGCACAAGCTTTAGCCACTCTAGGCAAGGTGAAAGAAGCACTCAAAGAATTTCTCTACTGCGTATCCCTTGATGGAAAGAACAAGAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS CCA 90 bp | TTGGAGACTTTATTAGGCAATTCTGTGTCTTCTTGGGTTTCGATTTaGCAACGATTTCTCTTCTTTTCCTGGCATTTGCCGGTCCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LETLLGNSVSSWVSI*QRFLFFSWHLPVLT Trigger: CGTCAGGACCGGCAAATGCCAGGAAAAGAAGAGAAATCGTTGCCAAATCGAAACCCAAGAAGACACAGAATTGCCTAATAAAGTCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CCA 90 bp | TTCAAGGTCAGATGCATCAAAGGATCCAAGTGGATTACTGAGATCTaGTTTGGCTCCCTGCTCAGCAGGAAAATCTTGTTTGGAGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FKVRCIKGSKWITEI*FGSLLSRKILFGDF Trigger: AAAGTCTCCAAACAAGATTTTCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAATCCACTTGGATCCTTTGATGCATCTGACCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CCA 90 bp | CTCTTGCCTATGCTGTCTACCACCGATCGGCCATCAGAAAAGAATTaGACATTTCTGATCTCTAAGATGCAGCCATATTCTACAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLPMLSTTDRPSEKN*TFLISKMQPYSTNP Trigger: AGGGTTTGTAGAATATGGCTGCATCTTAGAGATCAGAAATGTCCAATTCTTTTCTGATGGCCGATCGGTGGTAGACAGCATAGGCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTAGACGAACAGCCTCGTaGTACTTGAGCAGAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FKKHLKTVSQTGHILLVFRRTAS*YLSRAA Trigger: GGCAGCTCTGCTCAAGTACAACGAGGCTGTTCGTCT...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTTTACTGAGATCTGGTTaGGCTCCCTGCTCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSLLRSG*APCSAG Trigger: TCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAA...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 90 bp | GCATTGGACCAAAGTGATTTAGTATCCGATTCTTCAGAGATGCTTTaGGCGAGTGAAACCATGATGACGCTTGCTCATACACACAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALDQSDLVSDSSEML*ASETMMTLAHTHSC Trigger: ACAACTGTGTGTATGAGCAAGCGTCATCATGGTTTCACTCGCTCAAAGCATCTCTGAAGAATCGGATACTAAATCACTTTGGTCCAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | GTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGGTCTGTAAAAGAACGTCTTaGCACAGTGGACACTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VSQTGHILLVFLPHFCVVCKRTS*HSGHFA Trigger: TGCAAAGTGTCCACTGTGCAAAGACGTTCTTTTACA...GACCACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGTTAACTTTGAAGCGCCTCTaGCCTATGCTGTCTACCACC | + |
|
Preference number: 5 (lower is better) Translates to: FCVVKKNNNIYLGYSLLLTLKRL*PMLSTT Trigger: GGTGGTAGACAGCATAGGCAAGAGGCGCTTCAAAGT...TAACAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTAGTATCTCTGCTTGACATTTCAACCACACACTCATTTAGCTATGAACAACAAGTTGTAGCCATCCCGTaGACCCTGATGGAGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVSLLDISTTHSFSYEQQVVAIP*TLMEHF Trigger: AAAGTGCTCCATCAGGGTCAACGGGATGGCTACAAC...TTGTTGTTCATAGCTAAATGAGTGTGTGGTTGAAATGTCAAGCAGAGATACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCCTTTAAGGACCTCATaGCTAGGAAGGGAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKKHLKTVSQTGHILLVFPLRTS*LGREAE Trigger: CTCAGCTTCCCTTCCTAGCAATGAGGTCCTTAAAGG...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | CAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTCGTCCTTCTCTGGCATaGGACCAAAGTGATTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QEAFEDSKSNRSHPFGLSRPSLA*DQSDLV Trigger: TACTAAATCACTTTGGTCCAATGCCAGAGAAGGACG...AGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTTGCACAGTGGACACTTaGCATTATGATCTAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FKKHLKTVSQTGHILLVFCTVDT*HYDLGI Trigger: GATGCCTAGATCATAATGCAAAGTGTCCACTGTGCA...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCAAGAAGCATTTGAAGACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTTATTCTACAAACCCTTaGACAGGATCTCCAAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FKKHLKTVSQTGHILLVFYSTNP*TGSPRH Trigger: GTGCCTTGGAGATCCTGTCAAAGGGTTTGTAGAATA...AAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTCTTCAAATGCTTCTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | GACAGTAAGTCAAACAGGTCACATCCTTTTGGTCTTTCTACCTCATTTCTGTGTGCAGGAAAATCTTGTTaGGAGACTTTATTAGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: DSKSNRSHPFGLSTSFLCAGKSC*ETLLGN Trigger: ATTGCCTAATAAAGTCTCCAAACAAGATTTTCCTGC...ACACAGAAATGAGGTAGAAAGACCAAAAGGATGTGACCTGTTTGACTTACTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | TTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGTTAACATGCCAAACTGTCTaGTGCCTGTCTCAATACATC | + |
|
Preference number: 5 (lower is better) Translates to: FCVVKKNNNIYLGYSLLLTCQTV*CLSQYI Trigger: GATGTATTGAGACAGGCACAAGACAGTTTGGCATGT...TAACAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS-3UTR CAA 90 bp | CATTTCTGTGTGGTCAAAAAGAATAACAACATCTATCTAGGGTACTCTCTTCTGCAAGGTGAAATAAATTaGGGACCGATTGCTATAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HFCVVKKNNNIYLGYSLLQGEIN*GPIAIK Trigger: CTTTATAGCAATCGGTCCCAAATTTATTTCACCTTG...CAGAAGAGAGTACCCTAGATAGATGTTGTTATTCTTTTTGACCACACAGAAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 90 bp | CGCGGCCCGCGTGCCCTCCCACTGGCCGCCATCAGAGCGGAGAGCTaGACCCCGCACAGAGCGCAGCGCCGATCGGCGGCTCGCCCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RGPRALPLAAIRAES*TPHRAQRRSAARPR Trigger: GCGCGGGCGAGCCGCCGATCGGCGCTGCGCTCTGTGCGGGGTCAAGCTCTCCGCTCTGATGGCGGCCAGTGGGAGGGCACGCGGGCCGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 72 bp | AGTACCACGTTAACTCGCAGTTGCAGGGGCGCCGGCTaGCCCGCGCGCCGCGGCCCGCGTGCCCTCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: STTLTRSCRGAG*PARRGPRALPL Trigger: CAGTGGGAGGGCACGCGGGCCGCGGCGCGCGGGGCAGCCGGCGCCCCTGCAACTGCGAGTTAACGTGGTACT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 72 bp | TCCACCTGGTGCTCGCGGAACAGCCGGTTGCCCTCGTaGCGGAGTTGCGACGCCCGCGCGGGGCCCGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: STWCSRNSRLPS*RSCDARAGPGN Trigger: GTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCACCAGGTGGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS GCA 72 bp | GAGCTGCCTCCACCTGGTGCTCGCGGAACAGCCGGTTaGCCTCGTGCCGGAGTTGCGACGCCCGCGCGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELPPPGARGTAG*PRAGVATPARG Trigger: GCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCACCAGGTGGAGGCAGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS GCA 72 bp | TGCTCGCGGAACAGCCGGTTGCCCTCGTGCCGGAGTTaGGACGCCCGCGCGGGGCCCGGGAACAACTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: CSRNSRLPSCRS*DARAGPGNNLP Trigger: GGGCAAGTTGTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS CAA 72 bp | GTGCTCGCGGAACAGCCGGTTGCCCTCGTGCCGGAGTaGCGACGCCCGCGCGGGGCCCGGGAACAACTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLAEQPVALVPE*RRPRGAREQLA Trigger: GGCAAGTTGTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS CAA 72 bp | AGAGCTGCCTCCACCTGGTGCTCGCGGAACAGCCGGTaGCCCTCGTGCCGGAGTTGCGACGCCCGCGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RAASTWCSRNSR*PSCRSCDARAG Trigger: CCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCACCAGGTGGAGGCAGCTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS CAA 90 bp | CTCCACCTGGTGCTCGCGGAACAGCCGGTTGCCCTCGTGCCGGAGTaGCGACGCCCGCGCGGGGCCCGGGAACAACTTGCCCAGGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LHLVLAEQPVALVPE*RRPRGAREQLAQEA Trigger: GGCCTCCTGGGCAAGTTGTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCACCAGGTGGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS TCA 72 bp | GTGCCCTCCCACTGGCCGCCATCAGAGCGGAGAGCTTaGCCCCGCACAGAGCGCAGCGCCGATCGGCGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VPSHWPPSERRA*PRTERSADRRL Trigger: GAGCCGCCGATCGGCGCTGCGCTCTGTGCGGGGTCAAGCTCTCCGCTCTGATGGCGGCCAGTGGGAGGGCAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 72 bp | CGTGCCCTCCCACTGGCCGCCATCAGAGCGGAGAGCTaGACCCCGCACAGAGCGCAGCGCCGATCGGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RALPLAAIRAES*TPHRAQRRSAA Trigger: AGCCGCCGATCGGCGCTGCGCTCTGTGCGGGGTCAAGCTCTCCGCTCTGATGGCGGCCAGTGGGAGGGCACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 90 bp | TACTTGAGCAGAGCTGCCTCCACCTGGTGCTCGCGGAACAGCCGGTaGCCCTCGTGCCGGAGTTGCGACGCCCGCGCGGGGCCCGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: YLSRAASTWCSRNSR*PSCRSCDARAGPGN Trigger: GTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGGCAACCGGCTGTTCCGCGAGCACCAGGTGGAGGCAGCTCTGCTCAAGTA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS CAA 90 bp | CCCTCGTGCCGGAGTTGCGACGCCCGCGCGGGGCCCGGGAACAACTaGCCCAGGAGGCCGCTGAGTACCACGTTAACTCGCAGTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSCRSCDARAGPGNN*PRRPLSTTLTRSCR Trigger: CCTGCAACTGCGAGTTAACGTGGTACTCAGCGGCCTCCTGGGCAAGTTGTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCGGCACGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS TCA 72 bp | GTCGGGACCGCCAGAGGCAGGCTTTGCTCGGGCTCTTaGGCCCCGAGAGCTTGGGAGCCCTCGGGTGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VGTARGRLCSGS*APRAWEPSGVT Trigger: GGTGACACCCGAGGGCTCCCAAGCTCTCGGGGCTCAAGAGCCCGAGCAAAGCCTGCCTCTGGCGGTCCCGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 72 bp | CGGAGTTGCGACGCCCGCGCGGGGCCCGGGAACAACTaGCCCAGGAGGCCGCTGAGTACCACGTTAACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSCDARAGPGNN*PRRPLSTTLTR Trigger: GCGAGTTAACGTGGTACTCAGCGGCCTCCTGGGCAAGTTGTTCCCGGGCCCCGCGCGGGCGTCGCAACTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS GCA 72 bp | CCGGCTCCTCCGGCTCCGCCAGCTCCAAGTTGTTGCTaGCGAGCTCGGCGGACAAGCTCACCATCTGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAPPAPPAPSCC*RARRTSSPSVR Trigger: CCGCACAGATGGTGAGCTTGTCCGCCGAGCTCGGCAGCAACAACTTGGAGCTGGCGGAGCCGGAGGAGCCGG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 72 bp | TCCCCGGCTCCTCCGGCTCCGCCAGCTCCAAGTTGTTaGTGCCGAGCTCGGCGGACAAGCTCACCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SPAPPAPPAPSC*CRARRTSSPSV Trigger: CACAGATGGTGAGCTTGTCCGCCGAGCTCGGCAGCAACAACTTGGAGCTGGCGGAGCCGGAGGAGCCGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 72 bp | GATGTCCCCGGCTCCTCCGGCTCCGCCAGCTCCAAGTaGTTGCTGCCGAGCTCGGCGGACAAGCTCACCATC | + |
|
Preference number: 6 (lower is better) Translates to: DVPGSSGSASSK*LLPSSADKLTI Trigger: GATGGTGAGCTTGTCCGCCGAGCTCGGCAGCAACAACTTGGAGCTGGCGGAGCCGGAGGAGCCGGGGACATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 90 bp | AGGTGCCCCTCAGATGCCAAGGCATCCGCCTGCGTGAGCAGGACTTaGCACTCCAGCGGTGTCGGGACCGCCAGAGGCAGGCTTTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RCPSDAKASACVSRT*HSSGVGTARGRLCS Trigger: CGAGCAAAGCCTGCCTCTGGCGGTCCCGACACCGCTGGAGTGCAAAGTCCTGCTCACGCAGGCGGATGCCTTGGCATCTGAGGGGCACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 72 bp | TCTTGCGGGACACTGTCGGCCAAGCAGCGCACTAGCTaGTCCAGCTGCTCCGCTACGAGCTGCTGCCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SCGTLSAKQRTS*SSCSATSCCLS Trigger: CGAGAGGCAGCAGCTCGTAGCGGAGCAGCTGGAGCAGCTAGTGCGCTGCTTGGCCGACAGTGTCCCGCAAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 72 bp | ACACTGTCGGCCAAGCAGCGCACTAGCTGCTCCAGCTaGTCCGCTACGAGCTGCTGCCTCTCGGAGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TLSAKQRTSCSS*SATSCCLSESC Trigger: ACAGCTCTCCGAGAGGCAGCAGCTCGTAGCGGAGCAGCTGGAGCAGCTAGTGCGCTGCTTGGCCGACAGTGT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 72 bp | GTACACCTCGAGGGCTTCCCGAAGGTGCCCCTCAGATaGCAAGGCATCCGCCTGCGTGAGCAGGACTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VHLEGFPKVPLR*QGIRLREQDFA Trigger: TGCAAAGTCCTGCTCACGCAGGCGGATGCCTTGGCATCTGAGGGGCACCTTCGGGAAGCCCTCGAGGTGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | GGTCGTTTGGAGCTAGACGAACAGCCTCGTTGTACTTaGGCAGAGCTGCCTCCACCTGGTGCTCGCGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: GRLELDEQPRCT*AELPPPGARGT Trigger: TGTTCCGCGAGCACCAGGTGGAGGCAGCTCTGCTCAAGTACAACGAGGCTGTTCGTCTAGCTCCAAACGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS CCA 72 bp | CAGAGGAAGAACCGCCAGTGTCCACCAGCACCAGGCTaGACCATTCGGATTAACCTGGGGGTCTTCGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QRKNRQCPPAPG*TIRINLGVFVL Trigger: AAGGACGAAGACCCCCAGGTTAATCCGAATGGTCCAGCCTGGTGCTGGTGGACACTGGCGGTTCTTCCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | CCGCACCACAGGGACACCGGGTCTGAGAGAAACCCGTaGCACTTCTTGCACTTAAAGCCATCCCATACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PHHRDTGSERNP*HFLHLKPSHTS Trigger: CGAGGTATGGGATGGCTTTAAGTGCAAGAAGTGTCACGGGTTTCTCTCAGACCCGGTGTCCCTGTGGTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CCA 72 bp | GTCCACCAGCACCAGGCTGGACCATTCGGATTAACCTaGGGGTCTTCGTCCTTCTCTGGCATTGGACCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VHQHQAGPFGLT*GSSSFSGIGPK Trigger: CTTTGGTCCAATGCCAGAGAAGGACGAAGACCCCCAGGTTAATCCGAATGGTCCAGCCTGGTGCTGGTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 72 bp | AGCAAATGGTCGTTTGGAGCTAGACGAACAGCCTCGTaGTACTTGAGCAGAGCTGCCTCCACCTGGTGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SKWSFGARRTAS*YLSRAASTWCS Trigger: CGAGCACCAGGTGGAGGCAGCTCTGCTCAAGTACAACGAGGCTGTTCGTCTAGCTCCAAACGACCATTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS TCA 72 bp | AACGATTTCTCTTCTTTTCCTGGCATTTGCCGGTCCTaGCGGAGGCAGCATCCCGGTCCTCTCCTTCCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NDFSSFPGICRS*RRQHPGPLLPD Trigger: ATCAGGAAGGAGAGGACCGGGATGCTGCCTCCGTCAGGACCGGCAAATGCCAGGAAAAGAAGAGAAATCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | TGTTGTAGCCATCCCGTTGACCCTGATGGAGCACTTTaGAGCGCCTCTTGCCTATGCTGTCTACCACCGATC | + |
|
Preference number: 6 (lower is better) Translates to: CCSHPVDPDGAL*SASCLCCLPPI Trigger: GATCGGTGGTAGACAGCATAGGCAAGAGGCGCTTCAAAGTGCTCCATCAGGGTCAACGGGATGGCTACAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CCA 72 bp | TGGGTTTCGATTTGGCAACGATTTCTCTTCTTTTCCTaGCATTTGCCGGTCCTGACGGAGGCAGCATCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WVSIWQRFLFFS*HLPVLTEAASR Trigger: CCGGGATGCTGCCTCCGTCAGGACCGGCAAATGCCAGGAAAAGAAGAGAAATCGTTGCCAAATCGAAACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 72 bp | TCGATTTGGCAACGATTTCTCTTCTTTTCCTGGCATTaGCCGGTCCTGACGGAGGCAGCATCCCGGTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SIWQRFLFFSWH*PVLTEAASRSS Trigger: AGAGGACCGGGATGCTGCCTCCGTCAGGACCGGCAAATGCCAGGAAAAGAAGAGAAATCGTTGCCAAATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | GGTGCCAACAGCTTCAGGATATCGGGAGAATGTTCCTaGGACTCCCCCGGGACTGATGGTGAAAAGAAACTA | + |
|
Preference number: 6 (lower is better) Translates to: GANSFRISGECS*DSPGTDGEKKL Trigger: TAGTTTCTTTTCACCATCAGTCCCGGGGGAGTCTCAGGAACATTCTCCCGATATCCTGAAGCTGTTGGCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126147.2 |
||
| CDS CAA 90 bp | CCAGGATACGCCGAATACCATTCAATCTGTCCTTTAAGGACCTCATaGCTAGGAAGGGAAGCTGAGCTCTGCTTTCCAGAGGAAGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: PGYAEYHSICPLRTS*LGREAELCFPEEEP Trigger: CGGTTCTTCCTCTGGAAAGCAGAGCTCAGCTTCCCTTCCTAGCAATGAGGTCCTTAAAGGACAGATTGAATGGTATTCGGCGTATCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | CAAGGTCAGATGCATCAAAGGATCCAAGTGGATTACTaGGATCTGGTTTGGCTCCCTGCTCAGCAGGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: QGQMHQRIQVDY*DLVWLPAQQEN Trigger: ATTTTCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAATCCACTTGGATCCTTTGATGCATCTGACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | TGGGGGTCTTCGTCCTTCTCTGGCATTGGACCAAAGTaGTTTAGTATCCGATTCTTCAGAGATGCTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WGSSSFSGIGPK*FSIRFFRDALS Trigger: GCTCAAAGCATCTCTGAAGAATCGGATACTAAATCACTTTGGTCCAATGCCAGAGAAGGACGAAGACCCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CCA 72 bp | AGATGCATCAAAGGATCCAAGTGGATTACTGAGATCTaGTTTGGCTCCCTGCTCAGCAGGAAAATCTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RCIKGSKWITEI*FGSLLSRKILF Trigger: AAACAAGATTTTCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAATCCACTTGGATCCTTTGATGCATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 90 bp | TTTGGAGACTTTATTAGGCAATTCTGTGTCTTCTTGGGTTTCGATTaGGCAACGATTTCTCTTCTTTTCCTGGCATTTGCCGGTCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FGDFIRQFCVFLGFD*ATISLLFLAFAGPD Trigger: GTCAGGACCGGCAAATGCCAGGAAAAGAAGAGAAATCGTTGCCAAATCGAAACCCAAGAAGACACAGAATTGCCTAATAAAGTCTCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 90 bp | TGGATTACTGAGATCTGGTTTGGCTCCCTGCTCAGCAGGAAAATCTaGTTTGGAGACTTTATTAGGCAATTCTGTGTCTTCTTGGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: WITEIWFGSLLSRKI*FGDFIRQFCVFLGF Trigger: GAAACCCAAGAAGACACAGAATTGCCTAATAAAGTCTCCAAACAAGATTTTCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | TCTTTCCATCAAGGGATACGCAGTAGAGAAATTCTTTaGGTGCTTCTTTCACCTTGCCTAGAGTGGCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFHQGIRSREIL*VLLSPCLEWLK Trigger: CTTTAGCCACTCTAGGCAAGGTGAAAGAAGCACTCAAAGAATTTCTCTACTGCGTATCCCTTGATGGAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS TCA 72 bp | CCACCGATCGGCCATCAGAAAAGAATTGGACATTTCTaGTCTCTAAGATGCAGCCATATTCTACAAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PPIGHQKRIGHF*SLRCSHILQTL Trigger: AAGGGTTTGTAGAATATGGCTGCATCTTAGAGATCAGAAATGTCCAATTCTTTTCTGATGGCCGATCGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | TTTAGTATCCGATTCTTCAGAGATGCTTTGAGCGAGTaGAACCATGATGACGCTTGCTCATACACACAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSIRFFRDALSE*NHDDACSYTQL Trigger: CAACTGTGTGTATGAGCAAGCGTCATCATGGTTTCACTCGCTCAAAGCATCTCTGAAGAATCGGATACTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS GCA 72 bp | GATCCAAGTGGATTACTGAGATCTGGTTTGGCTCCCTaGTCAGCAGGAAAATCTTGTTTGGAGACTTTATTA | + |
|
Preference number: 6 (lower is better) Translates to: DPSGLLRSGLAP*SAGKSCLETLL Trigger: TAATAAAGTCTCCAAACAAGATTTTCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAATCCACTTGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CCA 72 bp | CTCTTCATAAAGCCTCTTTCGTTCCTTGAATTCTTCTaGCAGGAACGTAGCTATGAGTTCTTCCAGGATTAC | + |
|
Preference number: 6 (lower is better) Translates to: LFIKPLSFLEFF*QERSYEFFQDY Trigger: GTAATCCTGGAAGAACTCATAGCTACGTTCCTGCCAGAAGAATTCAAGGAACGAAAGAGGCTTTATGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 90 bp | TTACTGAGATCTGGTTTGGCTCCCTGCTCAGCAGGAAAATCTTGTTaGGAGACTTTATTAGGCAATTCTGTGTCTTCTTGGGTTTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: LLRSGLAPCSAGKSC*ETLLGNSVSSWVSI Trigger: AATCGAAACCCAAGAAGACACAGAATTGCCTAATAAAGTCTCCAAACAAGATTTTCCTGCTGAGCAGGGAGCCAAACCAGATCTCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS TCA 72 bp | CTGCATCATGCAGTGCATCCTCATGAGACTCCAAGGTaGAATAAATTTGGGACCGATTGCTATAAAGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LHHAVHPHETPR*NKFGTDCYKAN Trigger: ATTTGCTTTATAGCAATCGGTCCCAAATTTATTTCACCTTGGAGTCTCATGAGGATGCACTGCATGATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016383.10 ENSMUST00000126147.2 |
||
| CDS GCA 72 bp | ATTTTCTTGATGGCAAGCACTGTAAAAGAACGTCTTTaGACAGTGGACACTTTGCATTATGATCTAGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: IFLMASTVKERL*TVDTLHYDLGI Trigger: GATGCCTAGATCATAATGCAAAGTGTCCACTGTGCAAAGACGTTCTTTTACAGTGCTTGCCATCAAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||
| CDS CAA 90 bp | AGGAAAATCTTGTTTGGAGACTTTATTAGGCAATTCTGTGTCTTCTaGGGTTTCGATTTGGCAACGATTTCTCTTCTTTTCCTGGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: RKILFGDFIRQFCVF*GFDLATISLLFLAF Trigger: AAATGCCAGGAAAAGAAGAGAAATCGTTGCCAAATCGAAACCCAAGAAGACACAGAATTGCCTAATAAAGTCTCCAAACAAGATTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016383.10 |
||