Pregenerated sensors for LONRF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048814Ensembl transcript IDs: ENSMUST00000039612.5, ENSMUST00000147695.9
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTACAGGGTGGAAAGTCTACTTCGAAAACAGTGCTGTCTGCAGTaGGGACCCCAGCGGAAGCAGACAAAGCAAAGACTTACCAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: LYRVESLLRKQCCLQ*GPQRKQTKQRLTKG Trigger: ACCCTTGGTAAGTCTTTGCTTTGTCTGCTTCCGCTGGGGTCCCCACTGCAGACAGCACTGTTTTCGAAGTAGACTTTCCACCCTGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
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| 3UTR CCA 90 bp | TGTCAACTGATAGGGAGGGGCCTCTTCTACCTCAGCTTTAGGGAATaGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: CQLIGRGLFYLSFRE*VFLLCFAVCGNPAC Trigger: GCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAGGCCCCTCCCTATCAGTTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR CCA 90 bp | AGACCAAAGAGCTTGCTCCAGTTTGTTCTAGGAATAACAATGGATTaGGAGGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: RPKSLLQFVLGITMD*EAFYTATQLAQALW Trigger: CCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCCTCCCAATCCATTGTTATTCCTAGAACAAACTGGAGCAAGCTCTTTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR CCA 90 bp | AAGCTGTATGGAAGGAATGCTGGTCAAGGAAATAGCTTTACAGGGTaGAAAGTCTACTTCGAAAACAGTGCTGTCTGCAGTGGGGACCCC | + |
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Preference number: 1 (lower is better) Translates to: KLYGRNAGQGNSFTG*KVYFENSAVCSGDP Trigger: GGGGTCCCCACTGCAGACAGCACTGTTTTCGAAGTAGACTTTCCACCCTGTAAAGCTATTTCCTTGACCAGCATTCCTTCCATACAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
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| 3UTR GCA 90 bp | CAAGAAAGGGCTTGGTGGGTAGTCAGGGTCTCTTCTGCTGCCTGCTaGTGTTACAATCCATCACTGTTAAAACTGAAACCCATACAATGG | + |
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Preference number: 1 (lower is better) Translates to: QERAWWVVRVSSAAC*CYNPSLLKLKPIQW Trigger: CCATTGTATGGGTTTCAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCTTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR GCA 90 bp | ATGATGCCATCAAGAAAGGGCTTGGTGGGTAGTCAGGGTCTCTTCTaGTGCCTGCTGCTGTTACAATCCATCACTGTTAAAACTGAAACC | + |
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Preference number: 1 (lower is better) Translates to: MMPSRKGLVGSQGLF*CLLLLQSITVKTET Trigger: GGTTTCAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCTTTCTTGATGGCATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR GCA 90 bp | CATCAAGAAAGGGCTTGGTGGGTAGTCAGGGTCTCTTCTGCTGCCTaGTGCTGTTACAATCCATCACTGTTAAAACTGAAACCCATACAA | + |
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Preference number: 1 (lower is better) Translates to: HQERAWWVVRVSSAA*CCYNPSLLKLKPIQ Trigger: TTGTATGGGTTTCAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCTTTCTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR TCA 90 bp | TGTGTAACAGAGAACGTGACAATCATGCCACGTTCTCTTCGGCACTaGATCCCAAAAACTTGTGTTGTTCTCCTTAGCATCACTGCCATG | + |
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Preference number: 1 (lower is better) Translates to: CVTENVTIMPRSLRH*IPKTCVVLLSITAM Trigger: CATGGCAGTGATGCTAAGGAGAACAACACAAGTTTTTGGGATTCAGTGCCGAAGAGAACGTGGCATGATTGTCACGTTCTCTGTTACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR GCA 90 bp | TGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTaGGTTCCAGTCAAACATAGCATCTTTGGAAATCCTTTGTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: WVFLLCFAVCGNPAC*VPVKHSIFGNPLSP Trigger: AGGAGACAAAGGATTTCCAAAGATGCTATGTTTGACTGGAACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR GCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTaGTGCGTTCCAGTCAAACATAGCATCTTTGGAAATCCTTTGTCT | + |
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Preference number: 1 (lower is better) Translates to: EWVFLLCFAVCGNPA*CVPVKHSIFGNPLS Trigger: AGACAAAGGATTTCCAAAGATGCTATGTTTGACTGGAACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR GCA 90 bp | AAACAAGTTCACGGCGACACACAGAACCCAAGTCCAGTTTTGGCTTaGTTATATCTTAATATGTCTGTTCCCACTCACTGTCTAAACACT | + |
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Preference number: 1 (lower is better) Translates to: KQVHGDTQNPSPVLA*LYLNMSVPTHCLNT Trigger: AGTGTTTAGACAGTGAGTGGGAACAGACATATTAAGATATAAGCAAGCCAAAACTGGACTTGGGTTCTGTGTGTCGCCGTGAACTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR CCA 90 bp | ATGTCTGGGTTATTCCAAATGACATTCCCAACATGCACTGGAGGTTaGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTTGAA | + |
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Preference number: 1 (lower is better) Translates to: MSGLFQMTFPTCTGG*ELHLSLSDGNSPVE Trigger: TTCAACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR CCA 90 bp | GGCCATGAGCCTCTCTTTGTCTGGAACAGTAAACTTCTCTCTCAATaGTATTCATTGTTAGCTGCCATTTATAAATCGACACCCAGTACA | + |
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Preference number: 1 (lower is better) Translates to: GHEPLFVWNSKLLSQ*YSLLAAIYKSTPST Trigger: TGTACTGGGTGTCGATTTATAAATGGCAGCTAACAATGAATACCATTGAGAGAGAAGTTTACTGTTCCAGACAAAGAGAGGCTCATGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGATGTCTTTTCAGGCACTaGGATGGGGCCTGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SPYGTGVMATRSQSRKPRCLFRH*DGAWLL Trigger: GAGCAGCCAGGCCCCATCGCAGTGCCTGAAAAGACA...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGAAGCCACCAGCACACCTaGACCATGGCACAGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: SPYGTGVMATRSQSRKPRSHQHT*TMAQRS Trigger: AGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCT...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR CAA 90 bp | GGCAGTATGGGAGTGGAGAGCAGAGGACCACTGTGTACTGTGCACTaGGCCTTAAGGGATGTCCTCATTAGAAGCAGGAGCAGCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: GSMGVESRGPLCTVH*ALRDVLIRSRSSHW Trigger: CCAGTGGCTGCTCCTGCTTCTAATGAGGACATCCCTTAAGGCCAAGTGCACAGTACACAGTGGTCCTCTGCTCTCCACTCCCATACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCCGTGGTTGGGGAAGGTaGGGGAGTTACTGCTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSRGWGR*GSYCLS Trigger: GCTTAAGCAGTAACTCCCCCACCTTCCCCAACCACG...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGCCCACACACCTTGAATaGAGAAAGCAGAAGGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: GNGFFFYALQSVETLPAAPTHLE*RKQKVP Trigger: CGGCACCTTCTGCTTTCTTCATTCAAGGTGTGTGGG...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GTCAGGGTCTCTTCTGCTGCCTGCTGCTGTTACAATCCATCACTGTTAAAACTGAGCCTGAGAATCACCTaGACTCCTAGCCGCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: VRVSSAACCCYNPSLLKLSLRIT*TPSRLT Trigger: TGTCAGGCGGCTAGGAGTGCAGGTGATTCTCAGGCT...CAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGAGTCAGGGTCTCTTCTaGTGCCTGCTGCTGTTACAA | + |
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Preference number: 2 (lower is better) Translates to: GNGFFFYALQSVETLPAASQGLF*CLLLLQ Trigger: TTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACT...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGGACAAAAGTGTGTTGCGGTATAAGCTGTATGGAAGGAATGCTGGTCAAGCGATGGGGCCTGGCTaGTCTGTGATTCCAGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SVDKSVLRYKLYGRNAGQAMGPG*SVIPVC Trigger: GCACACTGGAATCACAGAGCAGCCAGGCCCCATCGC...TTGACCAGCATTCCTTCCATACAGCTTATACCGCAACACACTTTTGTCCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGAACATGCACTGGAGGTTaGGAGTTGCACTTATCATTA | + |
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Preference number: 2 (lower is better) Translates to: SPYGTGVMATRSQSRKPRTCTGG*ELHLSL Trigger: TAATGATAAGTGCAACTCCCAACCTCCAGTGCATGT...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCCTGAAACCCATACAATaGAGCCTGAGAATCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSLKPIQ*SLRITC Trigger: GCAGGTGATTCTCAGGCTCCATTGTATGGGTTTCAG...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTCAAGAAAGGGCTTGGTaGGTAGTCAGGGTCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTQERAW*VVRVSS Trigger: AGAAGAGACCCTGACTACCCACCAAGCCCTTTCTTG...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGACAGAATCTAGGCCATaGGCCTCTCTTTGTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: GNGFFFYALQSVETLPAATESRP*ASLCLE Trigger: TTCCAGACAAAGAGAGGCTCATGGCCTAGATTCTGT...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTCTTCTGCTGCCTGCTaGTGTTACAATCCATCACTG | + |
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Preference number: 2 (lower is better) Translates to: GNGFFFYALQSVETLPAASSAAC*CYNPSL Trigger: CAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGA...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GTATCACAAGTGAACGAGGCAGGACTAGGCAGCTTTGCAACCTACCGATTAGCCTCTTCTGCTGCCTGCTaGTGTTACAATCCATCACTG | + |
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Preference number: 2 (lower is better) Translates to: VSQVNEAGLGSFATYRLASSAAC*CYNPSL Trigger: CAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGA...GGCTAATCGGTAGGTTGCAAAGCTGCCTAGTCCTGCCTCGTTCACTTGTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGATCAGATACTAGAGTCTaGATGTGTGTGCATTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPYGTGVMATRSQSRKPRSDTRV*MCVHFS Trigger: TGAGAAATGCACACACATGCAGACTCTAGTATCTGA...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | GTATCACAAGTGAACGAGGCAGGACTAGGCAGCTTTGCAACCTACCGATTAGCCCTGAAACCCATACAATaGAGCCTGAGAATCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: VSQVNEAGLGSFATYRLALKPIQ*SLRITC Trigger: GCAGGTGATTCTCAGGCTCCATTGTATGGGTTTCAG...GGCTAATCGGTAGGTTGCAAAGCTGCCTAGTCCTGCCTCGTTCACTTGTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGACTTCAGTCGAATCTTaGACAGTGTCCAAGTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: GNGFFFYALQSVETLPAATSVES*TVSKSS Trigger: GCTAGACTTGGACACTGTGCAAGATTCGACTGAAGT...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR CAA 90 bp | AAAACAGGGTTTTGCACATCTAGTATGATGCCATCAAGAAAGGGCTaGGTGGGTAGTCAGGGTCTCTTCTGCTGCCTGCTGCTGTTACAA | + |
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Preference number: 2 (lower is better) Translates to: KTGFCTSSMMPSRKG*VGSQGLFCCLLLLQ Trigger: TTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCTTTCTTGATGGCATCATACTAGATGTGCAAAACCCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR CAA 90 bp | GCCTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTaGCAGTCTGTGGAAACCCTGCCTGCTGCGTTCCAGTCAAACATA | + |
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Preference number: 2 (lower is better) Translates to: ASSTSALGNGFFFYA*QSVETLPAAFQSNI Trigger: TATGTTTGACTGGAACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR TCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTGCTGACCTGGTCTGCTaGCTTACAGAGTTTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: EWVFLLCFAVCGNPACCVADLVC*LTEFLS Trigger: AGAAAGAAACTCTGTAAGTCAGCAGACCAGGTCAGC...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTACTTCAGTCGAATCTTaGACAGTGTCCAAGTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: GILHSHTASTGALELSVITSVES*TVSKSS Trigger: GCTAGACTTGGACACTGTGCAAGATTCGACTGAAGT...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTTCACTGTCTAAACACTaGCACTCGCATTGTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: EWVFLLCFAVCGNPACCVSLSKH*HSHCPP Trigger: AGGTGGACAATGCGAGTGCCAGTGTTTAGACAGTGA...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGGGAATAACAATGGATTaGGAGGCATTTTACACAGCC | + |
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Preference number: 2 (lower is better) Translates to: GNGFFFYALQSVETLPAAGITMD*EAFYTA Trigger: GGCTGTGTAAAATGCCTCCCAATCCATTGTTATTCC...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGAACTCCTAACCGTGGTTaGGGAAGGTGGGGGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: QITLGITIRKQKLLGSMGTPNRG*GRWGSY Trigger: GTAACTCCCCCACCTTCCCCAACCACGGTTAGGAGT...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR TCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGACCCACACACCTTGAATaGAGAAAGCAGAAGGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: QITLGITIRKQKLLGSMGPTHLE*RKQKVP Trigger: CGGCACCTTCTGCTTTCTTCATTCAAGGTGTGTGGG...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTTGGAAAACAGGGTTTTaGACATCTAGTATGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTWKTGF*TSSMMP Trigger: TGGCATCATACTAGATGTGCAAAACCCTGTTTTCCA...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTAAGCTATGTTCACACTaGATAGACACTTCCGTACAG | + |
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Preference number: 2 (lower is better) Translates to: GILHSHTASTGALELSVIKLCSH*IDTSVQ Trigger: CTGTACGGAAGTGTCTATCCAGTGTGAACATAGCTT...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGGTCTCTTCTGCTGCCTGCTGCTGTTACAATCCATCACTGTTAAAACTGCTTCCAGTAGAGTCGTaGAGAAGCTATGTTCACACT | + |
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Preference number: 2 (lower is better) Translates to: VRVSSAACCCYNPSLLKLLPVES*RSYVHT Trigger: AGTGTGAACATAGCTTCTCCACGACTCTACTGGAAG...CAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGAATGCTTTGCAGTCTGTaGAAACCCTGCCTGCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: QITLGITIRKQKLLGSMGMLCSL*KPCLLR Trigger: ACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCAT...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| 3UTR-3UTR CCA 90 bp | TACCGATTAGCCACTTTTTCCAAAGCTCAGTGGACAAAAGTGTGTTGCGGTATAATGCTTTGCAGTCTGTaGAAACCCTGCCTGCTGCGT | + |
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Preference number: 2 (lower is better) Translates to: YRLATFSKAQWTKVCCGIMLCSL*KPCLLR Trigger: ACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCAT...TATACCGCAACACACTTTTGTCCACTGAGCTTTGGAAAAAGTGGCTAATCGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
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| 3UTR-3UTR GCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTATGCGTGGAATGTCTTaGTCAAAAGGGCTTTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: EWVFLLCFAVCGNPACCVMRGMS*SKGLLS Trigger: GGATAAAAGCCCTTTTGAGCAAGACATTCCACGCAT...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTGTATTTGTCAGTTTCTaGAACTCAAAAACACTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GILHSHTASTGALELSVIVFVSF*NSKTLG Trigger: CCCCAGTGTTTTTGAGTTCCAGAAACTGACAAATAC...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | GTATCACAAGTGAACGAGGCAGGACTAGGCAGCTTTGCAACCTACCGATTAGCCGAGAAATTCAGTATTTaGCAAATGTCCCACTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: VSQVNEAGLGSFATYRLAEKFSI*QMSHLP Trigger: TGGTAAGTGGGACATTTGCCAAATACTGAATTTCTC...GGCTAATCGGTAGGTTGCAAAGCTGCCTAGTCCTGCCTCGTTCACTTGTGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTTTCTTCCTAGAGTGCATACTTGCTCAGAACGAGCTGCTGCAACCCAGACATGCACTGGAGGTTaGGAGTTGCACTTATCATTA | + |
|
Preference number: 2 (lower is better) Translates to: SFFLPRVHTCSERAAATQTCTGG*ELHLSL Trigger: TAATGATAAGTGCAACTCCCAACCTCCAGTGCATGT...CTGGGTTGCAGCAGCTCGTTCTGAGCAAGTATGCACTCTAGGAAGAAAGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTCTTTCTTCCTAGAGTGCATACTTGCTCAGAACGAGCTGCTGCAACCCAGGGCGGCAAGAATGTCTaGGTTATTCCAAATGACATT | + |
|
Preference number: 2 (lower is better) Translates to: SFFLPRVHTCSERAAATQGGKNV*VIPNDI Trigger: AATGTCATTTGGAATAACCCAGACATTCTTGCCGCC...CTGGGTTGCAGCAGCTCGTTCTGAGCAAGTATGCACTCTAGGAAGAAAGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGAAACTTCTCTCTCAATaGTATTCATTGTTAGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: GNGFFFYALQSVETLPAAKLLSQ*YSLLAA Trigger: GGCAGCTAACAATGAATACCATTGAGAGAGAAGTTT...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 90 bp | TCTGTGGAAACCCTGCCTGCTGCGTTCCAGTCAAACATAGCATCTTaGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SVETLPAAFQSNIAS*EILCLLLISIQTTE Trigger: TTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGATGCTATGTTTGACTGGAACGCAGCAGGCAGGGTTTCCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR TCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTCACTTACCACCACATTaGCAAGATTTTACAAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: EWVFLLCFAVCGNPACCVHLPPH*QDFTKC Trigger: GCACTTTGTAAAATCTTGTCAATGTGGTGGTAAGTG...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTCATTTAATTACAACATaGAATTTACAACACCCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: GILHSHTASTGALELSVIHLITT*NLQHPG Trigger: CCCCGGGTGTTGTAAATTGCATGTTGTAATTAAATG...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTCTGGGTTATTCCAAATaGCATTCCCAACATGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LFYLSFREWVFLLCFAVCLGYSK*HSQHAL Trigger: CAGTGCATGTTGGGAATGTCATTTGGAATAACCCAG...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGGGTCTCTTCTGCTGCCTGCTGCTGTTACAATCCATCACTGTTAAAACTGGAGAAATTCAGTATTTaGCAAATGTCCCACTTACCA | + |
|
Preference number: 2 (lower is better) Translates to: VRVSSAACCCYNPSLLKLEKFSI*QMSHLP Trigger: TGGTAAGTGGGACATTTGCCAAATACTGAATTTCTC...CAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTGGACAAAAGTGTGTTGCGGTATAAGCTGTATGGAAGGAATGCTGGTCAAGGCGGCAAGAATGTCTaGGTTATTCCAAATGACATT | + |
|
Preference number: 2 (lower is better) Translates to: SVDKSVLRYKLYGRNAGQGGKNV*VIPNDI Trigger: AATGTCATTTGGAATAACCCAGACATTCTTGCCGCC...TTGACCAGCATTCCTTCCATACAGCTTATACCGCAACACACTTTTGTCCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTCTTCCAGTAGAGTCGTaGAGAAGCTATGTTCACACT | + |
|
Preference number: 2 (lower is better) Translates to: LFYLSFREWVFLLCFAVCLPVES*RSYVHT Trigger: AGTGTGAACATAGCTTCTCCACGACTCTACTGGAAG...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR GCA 90 bp | TACCGATTAGCCACTTTTTCCAAAGCTCAGTGGACAAAAGTGTGTTGCGGTATAATGCGTGGAATGTCTTaGTCAAAAGGGCTTTTATCC | + |
|
Preference number: 2 (lower is better) Translates to: YRLATFSKAQWTKVCCGIMRGMS*SKGLLS Trigger: GGATAAAAGCCCTTTTGAGCAAGACATTCCACGCAT...TATACCGCAACACACTTTTGTCCACTGAGCTTTGGAAAAAGTGGCTAATCGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTTGTATTTGTCAGTTTCTaGAACTCAAAAACACTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: CTGGWELHLSLSDGNSPVVFVSF*NSKTLG Trigger: CCCCAGTGTTTTTGAGTTCCAGAAACTGACAAATAC...AACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAACATGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCATTTAATTACAACATaGAATTTACAACACCCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PTCTGGWELHLSLSDGNSHLITT*NLQHPG Trigger: CCCCGGGTGTTGTAAATTGCATGTTGTAATTAAATG...GGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCATGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR GCA 90 bp | TACCGATTAGCCACTTTTTCCAAAGCTCAGTGGACAAAAGTGTGTTGCGGTATATGGAAAACAGGGTTTTaGACATCTAGTATGATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: YRLATFSKAQWTKVCCGIWKTGF*TSSMMP Trigger: TGGCATCATACTAGATGTGCAAAACCCTGTTTTCCA...TATACCGCAACACACTTTTGTCCACTGAGCTTTGGAAAAAGTGGCTAATCGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR CAA 90 bp | CCTCTCTTTGTCTGGAACAGTAAACTTCTCTCTCAATGGTATTCATaGTTAGCTGCCATTTATAAATCGACACCCAGTACAGTTCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PLFVWNSKLLSQWYS*LAAIYKSTPSTVQR Trigger: TCTCTGAACTGTACTGGGTGTCGATTTATAAATGGCAGCTAACAATGAATACCATTGAGAGAGAAGTTTACTGTTCCAGACAAAGAGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACCTGGGTTATTCCAAATaGCATTCCCAACATGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: SLEILCLLLISIQTTEMYLGYSK*HSQHAL Trigger: CAGTGCATGTTGGGAATGTCATTTGGAATAACCCAG...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTAAACTTCTCTCTCAATaGTATTCATTGTTAGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: LFYLSFREWVFLLCFAVCKLLSQ*YSLLAA Trigger: GGCAGCTAACAATGAATACCATTGAGAGAGAAGTTT...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACAAGCTATGTTCACACTaGATAGACACTTCCGTACAG | + |
|
Preference number: 2 (lower is better) Translates to: SLEILCLLLISIQTTEMYKLCSH*IDTSVQ Trigger: CTGTACGGAAGTGTCTATCCAGTGTGAACATAGCTT...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 90 bp | GAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTaGAATAAAGATAAAACTTTGTTTACAATGCGTTTGGCTGTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: EVGSCTYHYLMEIPQ*NKDKTLFTMRLAVS Trigger: ACTTACAGCCAAACGCATTGTAAACAAAGTTTTATCTTTATTCAACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACGTATTGTCAGTCAGATaGACATCTTACAGACTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SLEILCLLLISIQTTEMYVLSVR*TSYRLS Trigger: ACTTAGTCTGTAAGATGTGCATCTGACTGACAATAC...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | ACTCCTAACCGTGGTTGGGGAAGGTGGGGGAGTTACTaGTTAAGCCCAGCATGGGCTCCGCTGACCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TPNRGWGRWGSY*LSPAWAPLTWS Trigger: AGACCAGGTCAGCGGAGCCCATGCTGGGCTTAAGCAGTAACTCCCCCACCTTCCCCAACCACGGTTAGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | AGAGTGCATGCGCCAGCCCATATGGTACGGGAGTCATaGCAACAAGGAGCCAGAGCAGGAAGCCGAGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVHAPAHMVRES*QQGARAGSREV Trigger: GACCTCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCTGGCGCATGCACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | GCTCCATCTTGTCTTTTCAGGCACTGCGATGGGGCCTaGCTGCTCTGTGATTCCAGTGTGCAGCTGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: APSCLFRHCDGA*LLCDSSVQLVC Trigger: ACAGACCAGCTGCACACTGGAATCACAGAGCAGCCAGGCCCCATCGCAGTGCCTGAAAAGACAAGATGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR TCA 72 bp | TCTTTTCAGGCACTGCGATGGGGCCTGGCTGCTCTGTaGTTCCAGTGTGCAGCTGGTCTGTTGCTATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SFQALRWGLAAL*FQCAAGLLLCS Trigger: AGAGCATAGCAACAGACCAGCTGCACACTGGAATCACAGAGCAGCCAGGCCCCATCGCAGTGCCTGAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | CATCTTGTCTTTTCAGGCACTGCGATGGGGCCTGGCTaGTCTGTGATTCCAGTGTGCAGCTGGTCTGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: HLVFSGTAMGPG*SVIPVCSWSVA Trigger: AGCAACAGACCAGCTGCACACTGGAATCACAGAGCAGCCAGGCCCCATCGCAGTGCCTGAAAAGACAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | GTCCGCACCAGCTGCTCAGGCGGCGGCAAGAATGTCTaGGTTATTCCAAATGACATTCCCAACATGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: VRTSCSGGGKNV*VIPNDIPNMHW Trigger: CCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCCTGAGCAGCTGGTGCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | AGGTCTACTACAGCTCCATCTTGTCTTTTCAGGCACTaGGATGGGGCCTGGCTGCTCTGTGATTCCAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RSTTAPSCLFRH*DGAWLLCDSSV Trigger: CACACTGGAATCACAGAGCAGCCAGGCCCCATCGCAGTGCCTGAAAAGACAAGATGGAGCTGTAGTAGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR TCA 72 bp | CTCAGGCGGCGGCAAGAATGTCTGGGTTATTCCAAATaGCATTCCCAACATGCACTGGAGGTTGGGAGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRRRQECLGYSK*HSQHALEVGSC Trigger: GCAACTCCCAACCTCCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | TGGCTGCTCTGTGATTCCAGTGTGCAGCTGGTCTGTTaGTATGCTCTCCCCGTGAAGAGGAGTCTGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: WLLCDSSVQLVC*YALPVKRSLKM Trigger: CATTTTCAGACTCCTCTTCACGGGGAGAGCATAGCAACAGACCAGCTGCACACTGGAATCACAGAGCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | GGAAATGTACTAAACCCTGCTACTCCTAACCGTGGTTaGGGAAGGTGGGGGAGTTACTGCTTAAGCCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GNVLNPATPNRG*GRWGSYCLSPA Trigger: TGCTGGGCTTAAGCAGTAACTCCCCCACCTTCCCCAACCACGGTTAGGAGTAGCAGGGTTTAGTACATTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | TTAAGGGATGTCCTCATTAGAAGCAGGAGCAGCCACTaGGGTTACTGTCAACTGATAGGGAGGGGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRDVLIRSRSSH*GYCQLIGRGLF Trigger: GAAGAGGCCCCTCCCTATCAGTTGACAGTAACCCCAGTGGCTGCTCCTGCTTCTAATGAGGACATCCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTCTGTGTACTGTGCACTaGGCCTTAAGGGATGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTLCTVH*ALRDVL Trigger: GAGGACATCCCTTAAGGCCAAGTGCACAGTACACAG...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTCAGCTCAGCAGGGTATaGTCAGTCAGATGCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTQLSRV*SVRCTS Trigger: AGATGTGCATCTGACTGACAATACCCTGCTGAGCTG...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGATTGTTTACAATGCGTTaGGCTGTAAGTTTGACATCC | + |
|
Preference number: 3 (lower is better) Translates to: SPYGTGVMATRSQSRKPRLFTMR*AVSLTS Trigger: GGATGTCAAACTTACAGCCAAACGCATTGTAAACAA...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | GCTTGGTGGGTAGTCAGGGTCTCTTCTGCTGCCTGCTaGTGTTACAATCCATCACTGTTAAAACTGAAACCC | + |
|
Preference number: 3 (lower is better) Translates to: AWWVVRVSSAAC*CYNPSLLKLKP Trigger: GGGTTTCAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | GAGAAAGTCTTTTCTTGGAAAAGCCACCAGCACACCTaGACCATGGCACAGAGGTCTACTACAGCTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: EKVFSWKSHQHT*TMAQRSTTAPS Trigger: AGATGGAGCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGACTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | AGGGCTTGGTGGGTAGTCAGGGTCTCTTCTGCTGCCTaGTGCTGTTACAATCCATCACTGTTAAAACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RAWWVVRVSSAA*CCYNPSLLKLK Trigger: TTTCAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | AGAAAGGGCTTGGTGGGTAGTCAGGGTCTCTTCTGCTaGCTGCTGCTGTTACAATCCATCACTGTTAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: RKGLVGSQGLFC*LLLLQSITVKT Trigger: AGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | TCAAGAAAGGGCTTGGTGGGTAGTCAGGGTCTCTTCTaGTGCCTGCTGCTGTTACAATCCATCACTGTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SRKGLVGSQGLF*CLLLLQSITVK Trigger: TTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCTTTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | GGTCTGCTGACTTACAGAGTTTCTTTCTTCCTAGAGTaGATACTTGCTCAGAACGAGCTGCTGCAACCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLLTYRVSFFLE*ILAQNELLQPS Trigger: ACTGGGTTGCAGCAGCTCGTTCTGAGCAAGTATGCACTCTAGGAAGAAAGAAACTCTGTAAGTCAGCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | TCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATaGCACAGAGGTCTACTACAGCTCCATCTTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SFLGKATSTPGP*HRGLLQLHLVF Trigger: AAAGACAAGATGGAGCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCTCTCTTAACTCATTTTaGACTACCCTTCTGGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSSLNSF*TTLLEC Trigger: ACACTCCAGAAGGGTAGTCAAAAATGAGTTAAGAGA...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCGTTGTGCTACTGAAATaGTCCAATAACCAAGAATCC | + |
|
Preference number: 3 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSVVLLK*SNNQES Trigger: GGATTCTTGGTTATTGGACAATTTCAGTAGCACAAC...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCTTTCTTCCTAGAGTGCATACTTGCTCAGAACGAGCTGCTGCAACCCAGACAGGCGCTCTGGAGTaGTCTGTAATTCTGGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFFLPRVHTCSERAAATQTGALE*SVILEN Trigger: GTTTTCCAGAATTACAGACAACTCCAGAGCGCCTGT...CTGGGTTGCAGCAGCTCGTTCTGAGCAAGTATGCACTCTAGGAAGAAAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCAAAATGCCTGATGGGTaGATAAGCCATCAACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSKMPDG*ISHQHF Trigger: AAAATGTTGATGGCTTATCAACCCATCAGGCATTTT...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | GACTTACAGAGTTTCTTTCTTCCTAGAGTGCATACTTaGTCAGAACGAGCTGCTGCAACCCAGTTAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DLQSFFLPRVHT*SERAAATQLEP Trigger: TGGCTCTAACTGGGTTGCAGCAGCTCGTTCTGAGCAAGTATGCACTCTAGGAAGAAAGAAACTCTGTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | CTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTaGGTTCCAGTCAAACATAGCATCTTTGGAAATCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLCFAVCGNPAC*VPVKHSIFGNP Trigger: AGGATTTCCAAAGATGCTATGTTTGACTGGAACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | AGTATCACAAGTGAACGAGGCAGGACTAGGCAGCTTTaGAACCTACCGATTAGCCACTTTTTCCAAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SITSERGRTRQL*NLPISHFFQSS Trigger: TGAGCTTTGGAAAAAGTGGCTAATCGGTAGGTTGCAAAGCTGCCTAGTCCTGCCTCGTTCACTTGTGATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | ATAGGGAGGGGCCTCTTCTACCTCAGCTTTAGGGAATaGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IGRGLFYLSFRE*VFLLCFAVCGN Trigger: GTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAGGCCCCTCCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTCCACTTACCACCACATaGACAAGATTTTACAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: GILHSHTASTGALELSVIPLTTT*TRFYKV Trigger: CACTTTGTAAAATCTTGTCAATGTGGTGGTAAGTGG...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCGGCGGCAAGAATGTCTGGGTTATTCCAAATGACATTCCCAACATGCACTGGTTCAGTTCATTAATTTaGCAAACAAGTTCACGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: GGGKNVWVIPNDIPNMHWFSSLI*QTSSRR Trigger: TCGCCGTGAACTTGTTTGCAAAATTAATGAACTGAA...CCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR TCA 72 bp | TTCAGTATTTGGCAAATGTCCCACTTACCACCACATTaGCAAGATTTTACAAAGTGCGCCGAAGAGGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: FSIWQMSHLPPH*QDFTKCAEEDG Trigger: CCCGTCCTCTTCGGCGCACTTTGTAAAATCTTGTCAATGTGGTGGTAAGTGGGACATTTGCCAAATACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR TCA 72 bp | GAGAACGTGACAATCATGCCACGTTCTCTTCGGCACTaGATCCCAAAAACTTGTGTTGTTCTCCTTAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: ENVTIMPRSLRH*IPKTCVVLLSI Trigger: GATGCTAAGGAGAACAACACAAGTTTTTGGGATTCAGTGCCGAAGAGAACGTGGCATGATTGTCACGTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | AGCTTGCTCCAGTTTGTTCTAGGAATAACAATGGATTaGGAGGCATTTTACACAGCCACACAGCTAGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLLQFVLGITMD*EAFYTATQLAQ Trigger: CTGTGCTAGCTGTGTGGCTGTGTAAAATGCCTCCCAATCCATTGTTATTCCTAGAACAAACTGGAGCAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | GGAAGGAATGCTGGTCAAGGAAATAGCTTTACAGGGTaGAAAGTCTACTTCGAAAACAGTGCTGTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GRNAGQGNSFTG*KVYFENSAVCS Trigger: ACTGCAGACAGCACTGTTTTCGAAGTAGACTTTCCACCCTGTAAAGCTATTTCCTTGACCAGCATTCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGAGCCATGAGCCTCTCTTaGTCTGGAACAGTAAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: QITLGITIRKQKLLGSMGAMSLS*SGTVNF Trigger: GAAGTTTACTGTTCCAGACAAAGAGAGGCTCATGGC...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR GCA 72 bp | TTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTaGTGCGTTCCAGTCAAACATAGCATCTTTGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FLLCFAVCGNPA*CVPVKHSIFGN Trigger: ATTTCCAAAGATGCTATGTTTGACTGGAACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | AAGTTCACGGCGACACACAGAACCCAAGTCCAGTTTTaGCTTGCTTATATCTTAATATGTCTGTTCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: KFTATHRTQVQF*LAYILICLFPL Trigger: GAGTGGGAACAGACATATTAAGATATAAGCAAGCCAAAACTGGACTTGGGTTCTGTGTGTCGCCGTGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | AGCAGACAAAGCAAAGACTTACCAAGGGTTTCAACATaGTTCACAGTACTCAAGCTTTGTCCAGCTTTCCGT | + |
|
Preference number: 3 (lower is better) Translates to: SRQSKDLPRVST*FTVLKLCPAFR Trigger: ACGGAAAGCTGGACAAAGCTTGAGTACTGTGAACCATGTTGAAACCCTTGGTAAGTCTTTGCTTTGTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGAGAAGAGGACGGGTATTaGTCAGTTTCTGGAACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QITLGITIRKQKLLGSMGEEDGY*SVSGTQ Trigger: TTGAGTTCCAGAAACTGACAAATACCCGTCCTCTTC...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTAAAATGCCTGATGGGTaGATAAGCCATCAACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: EWVFLLCFAVCGNPACCVKMPDG*ISHQHF Trigger: AAAATGTTGATGGCTTATCAACCCATCAGGCATTTT...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTGTTTACAATGCGTTTGGCTGTAAGTTTGACATCCCAATGGACACACATCGAAGAGGACGGGTATTaGTCAGTTTCTGGAACTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TLFTMRLAVSLTSQWTHIEEDGY*SVSGTQ Trigger: TTGAGTTCCAGAAACTGACAAATACCCGTCCTCTTC...GATGTGTGTCCATTGGGATGTCAAACTTACAGCCAAACGCATTGTAAACAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTTTAAACCCACACACCTaGAATGAAGAAAGCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LFYLSFREWVFLLCFAVCLNPHT*NEESRR Trigger: CCTTCTGCTTTCTTCATTCAAGGTGTGTGGGTTTAA...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTTCCCAAAAACTTGTGTaGTTCTCCTTAGCATCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LFYLSFREWVFLLCFAVCSQKLV*FSLASL Trigger: CAGTGATGCTAAGGAGAACAACACAAGTTTTTGGGA...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTAGGAATAACAATGGATaGGGAGGCATTTTACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LFYLSFREWVFLLCFAVCRNNNG*GGILHS Trigger: GCTGTGTAAAATGCCTCCCAATCCATTGTTATTCCT...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCGATTAGCCACTTTTTCCAAAGCTCAGTGGACAAAAGTGTGTTGCGGTATATTTTTCTTCTATGCTTaGCAGTCTGTGGAAACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YRLATFSKAQWTKVCCGIFFFYA*QSVETL Trigger: CAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAA...TATACCGCAACACACTTTTGTCCACTGAGCTTTGGAAAAAGTGGCTAATCGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | TTCTCACAGAATCTAGGCCATGAGCCTCTCTTTGTCTaGAACAGTAAACTTCTCTCTCAATGGTATTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: FSQNLGHEPLFV*NSKLLSQWYSL Trigger: CAATGAATACCATTGAGAGAGAAGTTTACTGTTCCAGACAAAGAGAGGCTCATGGCCTAGATTCTGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCGATTAGCCACTTTTTCCAAAGCTCAGTGGACAAAAGTGTGTTGCGGTATACCACTTACCACCACATaGACAAGATTTTACAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YRLATFSKAQWTKVCCGIPLTTT*TRFYKV Trigger: CACTTTGTAAAATCTTGTCAATGTGGTGGTAAGTGG...TATACCGCAACACACTTTTGTCCACTGAGCTTTGGAAAAAGTGGCTAATCGGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTTCTCTTAACTCATTTTaGACTACCCTTCTGGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LFYLSFREWVFLLCFAVCSLNSF*TTLLEC Trigger: ACACTCCAGAAGGGTAGTCAAAAATGAGTTAAGAGA...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACTTAAACCCACACACCTaGAATGAAGAAAGCAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLEILCLLLISIQTTEMYLNPHT*NEESRR Trigger: CCTTCTGCTTTCTTCATTCAAGGTGTGTGGGTTTAA...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACAGGAATAACAATGGATaGGGAGGCATTTTACACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLEILCLLLISIQTTEMYRNNNG*GGILHS Trigger: GCTGTGTAAAATGCCTCCCAATCCATTGTTATTCCT...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CCA 72 bp | CCTCTCTTTGTCTGGAACAGTAAACTTCTCTCTCAATaGTATTCATTGTTAGCTGCCATTTATAAATCGACA | + |
|
Preference number: 3 (lower is better) Translates to: PLFVWNSKLLSQ*YSLLAAIYKST Trigger: TGTCGATTTATAAATGGCAGCTAACAATGAATACCATTGAGAGAGAAGTTTACTGTTCCAGACAAAGAGAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGAGCTGCTGGGTGCCGCTaGGACGATGCCTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPYGTGVMATRSQSRKPRAAGCR*DDAFQS Trigger: GCTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGC...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTCCATCTCGGTGGCGGTaGCTCAGGACTCTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GILHSHTASTGALELSVIPSRWR*LRTLKR Trigger: CCGCTTCAGAGTCCTGAGCCACCGCCACCGAGATGG...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTTTGCACAGTGGACAGTaGGGGGCGTGGTCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GILHSHTASTGALELSVILHSGQ*GAWSRQ Trigger: TTGCCTGGACCACGCCCCTCACTGTCCACTGTGCAA...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTTGCATCTCCTTATCATaGGCCGGTAGCGGGGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTCISLS*AGSGAR Trigger: TCGAGCCCCGCTACCGGCTCATGATAAGGAGATGCA...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGAGCCCGCACCGGCACCTaGTCCACGCAGCGCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QITLGITIRKQKLLGSMGARTGT*STQRLH Trigger: GTGCAAGCGCTGCGTGGAGCAGGTGCCGGTGCGGGC...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGAAGATGGGCACATCTCTaGTCAGATTGGACAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPYGTGVMATRSQSRKPRRWAHL*SDWTAL Trigger: CAGAGCTGTCCAATCTGACCAGAGATGTGCCCATCT...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTGCATCACTGGGAAGCTaGCTCTTCAAGGTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTASLGS*LFKVLL Trigger: CAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGC...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGAATCTGGGCTTTTATATaGTGCCCCTTGGTCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPYGTGVMATRSQSRKPRIWAFI*CPLVRR Trigger: TCTCCTGACCAAGGGGCACCATATAAAAGCCCAGAT...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTCGTCCTGGGCATCACTaGGAAGCTGCCTCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GILHSHTASTGALELSVIRPGHH*EAASSR Trigger: CCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACG...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTTTGTCTGCATTAGCGTaGCCGCCTGCTTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTLSALA*PPASSR Trigger: TCTGGAAGAAGCAGGCGGTCACGCTAATGCAGACAA...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCCAGTCGCATCGATTGTaGACTCTGGCTCTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSQSHRL*TLALPL Trigger: TAGAGGAAGAGCCAGAGTTCACAATCGATGCGACTG...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTTTCTTCCTAGAGTGCATACTTGCTCAGAACGAGCTGCTGCAACCCAGTGCATCTCCTTATCATaGGCCGGTAGCGGGGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFFLPRVHTCSERAAATQCISLS*AGSGAR Trigger: TCGAGCCCCGCTACCGGCTCATGATAAGGAGATGCA...CTGGGTTGCAGCAGCTCGTTCTGAGCAAGTATGCACTCTAGGAAGAAAGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCTTCACACAGGGCCTCTaGTCCAGTTTCAGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSFTQGL*SSFSGR Trigger: TCTTCCACTGAAACTGGACCAGAGGCCCTGTGTGAA...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | TACCGATTAGCCACTTTTTCCAAAGCTCAGTGGACAAAAGTGTGTTGCGGTATAGCTGCTGGGTGCCGCTaGGACGATGCCTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRLATFSKAQWTKVCCGIAAGCR*DDAFQS Trigger: GCTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGC...TATACCGCAACACACTTTTGTCCACTGAGCTTTGGAAAAAGTGGCTAATCGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTTTCTTCCTAGAGTGCATACTTGCTCAGAACGAGCTGCTGCAACCCAGCGTCCTGGGCATCACTaGGAAGCTGCCTCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFFLPRVHTCSERAAATQRPGHH*EAASSR Trigger: CCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACG...CTGGGTTGCAGCAGCTCGTTCTGAGCAAGTATGCACTCTAGGAAGAAAGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGCATGTGATCCTGGAGTaGAGCAAACCAGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNGFFFYALQSVETLPAAHVILE*SKPGHR Trigger: TCTGTGTCCTGGTTTGCTTCACTCCAGGATCACATG...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | GGCATTTTACACAGCCACACAGCTAGCACAGGCGCTCTGGAGTTGTCTGTAATTTGCCAAACCGCTTGGTaGCAGTTTCCATGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GILHSHTASTGALELSVICQTAW*QFPCIS Trigger: GGAGATGCATGGAAACTGGCACCAAGCGGTTTGGCA...AATTACAGACAACTCCAGAGCGCCTGTGCTAGCTGTGTGGCTGTGTAAAATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTTTATATGGTGCCCCTTaGTCAGGAGAGGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTLYGAP*SGEVPS Trigger: AGAGGGAACCTCTCCTGACCAAGGGGCACCATATAA...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGCGGCGGCAAGAATGTCTGGGTTATTCCAAATGACATTCCCAACATGCACTGGTTATATGGTGCCCCTTaGTCAGGAGAGGTTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGKNVWVIPNDIPNMHWLYGAP*SGEVPS Trigger: AGAGGGAACCTCTCCTGACCAAGGGGCACCATATAA...CCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGCGCATTCCTCTGAGGTaGGGAGTCTGCATCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNGFFFYALQSVETLPAARIPLR*GVCIFL Trigger: AAGAAAGATGCAGACTCCCCACCTCAGAGGAATGCG...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTATCACAAGTGAACGAGGCAGGACTAGGCAGCTTTGCAACCTACCGATTAGCCCGCATTCCTCTGAGGTaGGGAGTCTGCATCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSQVNEAGLGSFATYRLARIPLR*GVCIFL Trigger: AAGAAAGATGCAGACTCCCCACCTCAGAGGAATGCG...GGCTAATCGGTAGGTTGCAAAGCTGCCTAGTCCTGCCTCGTTCACTTGTGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGACCATCTCGGTGGCGGTaGCTCAGGACTCTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QITLGITIRKQKLLGSMGPSRWR*LRTLKR Trigger: CCGCTTCAGAGTCCTGAGCCACCGCCACCGAGATGG...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGTCTCTTCTGCTGCCTGCTGCTGTTACAATCCATCACTGTTAAAACTGATTGCTCTGTGGCTCTaGCTCCCTGTCTGGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: VRVSSAACCCYNPSLLKLIALWL*LPVWHR Trigger: TCGATGCCAGACAGGGAGCCAGAGCCACAGAGCAAT...CAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTTTGTCTGCATTAGCGTaGCCGCCTGCTTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWVFLLCFAVCGNPACCVLSALA*PPASSR Trigger: TCTGGAAGAAGCAGGCGGTCACGCTAATGCAGACAA...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTATCCGCGGGTGCATCTaGCTTCTCAGATGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EWVFLLCFAVCGNPACCVIRGCI*LLRWSL Trigger: AAGACTCCATCTGAGAAGTCAGATGCACCCGCGGAT...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGCTGAGGTGGGGAGTCTaGATCTTTCTTGGGAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNGFFFYALQSVETLPAALRWGV*IFLGNL Trigger: AAGATTCCCAAGAAAGATGCAGACTCCCCACCTCAG...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACAGCGCTTCCCCCAGCTaGAAGCACAGGCCGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLEILCLLLISIQTTEMYSASPS*KHRPRS Trigger: GGAGCGCGGCCTGTGCTTGCAGCTGGGGGAAGCGCT...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTATCTGGGCTTTTATATaGTGCCCCTTGGTCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTIWAFI*CPLVRR Trigger: TCTCCTGACCAAGGGGCACCATATAAAAGCCCAGAT...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | TTTTGCACATCTAGTATGATGCCATCAAGAAAGGGCTaGGTGGGTAGTCAGGGTCTCTTCTGCTGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FCTSSMMPSRKG*VGSQGLFCCLL Trigger: CAGCAGGCAGCAGAAGAGACCCTGACTACCCACCAAGCCCTTTCTTGATGGCATCATACTAGATGTGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTCATGTGATCCTGGAGTaGAGCAAACCAGGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EWVFLLCFAVCGNPACCVHVILE*SKPGHR Trigger: TCTGTGTCCTGGTTTGCTTCACTCCAGGATCACATG...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | TGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTTCCGCGGATAAACACATaGCAAACCGCTTGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CTGGWELHLSLSDGNSPVPRINT*QTAWCQ Trigger: CTGGCACCAAGCGGTTTGGCATGTGTTTATCCGCGG...AACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGCATCTCTGGTCAGATTaGACAGCTCTGACATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNGFFFYALQSVETLPAAHLWSD*TALTSL Trigger: AAGAGATGTCAGAGCTGTCCAATCTGACCAGAGATG...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGCGGCGGCAAGAATGTCTGGGTTATTCCAAATGACATTCCCAACATGCACTGGCATCTCTGGTCAGATTaGACAGCTCTGACATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGGKNVWVIPNDIPNMHWHLWSD*TALTSL Trigger: AAGAGATGTCAGAGCTGTCCAATCTGACCAGAGATG...CCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTACATGCCAAACCGCTTaGTGCCAGTTTCCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: EWVFLLCFAVCGNPACCVTCQTA*CQFPCI Trigger: GATGCATGGAAACTGGCACCAAGCGGTTTGGCATGT...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTAAGTTCTTCAAACTCTaGACCTTCCACCTTCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTKFFKL*TFHLLV Trigger: GACGAGAAGGTGGAAGGTCCAGAGTTTGAAGAACTT...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGACAAAAGTGTGTTGCGGTATAAGCTGTATGGAAGGAATGCTGGTCAAAGGCCATGCCGAGAATaGCCAGTTGAGCCTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVDKSVLRYKLYGRNAGQRPCRE*PVEPCV Trigger: AACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCT...TTGACCAGCATTCCTTCCATACAGCTTATACCGCAACACACTTTTGTCCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | TGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTTATCCGCGGGTGCATCTaGCTTCTCAGATGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGGWELHLSLSDGNSPVIRGCI*LLRWSL Trigger: AAGACTCCATCTGAGAAGTCAGATGCACCCGCGGAT...AACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGAGCATCACTGGGAAGCTaGCTCTTCAAGGTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QITLGITIRKQKLLGSMGASLGS*LFKVLL Trigger: CAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGC...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTCCGCGGATAAACACATaGCAAACCGCTTGGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFYLSFREWVFLLCFAVCPRINT*QTAWCQ Trigger: CTGGCACCAAGCGGTTTGGCATGTGTTTATCCGCGG...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGAATTGCTCTGTGGCTCTaGCTCCCTGTCTGGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: QITLGITIRKQKLLGSMGIALWL*LPVWHR Trigger: TCGATGCCAGACAGGGAGCCAGAGCCACAGAGCAAT...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTAGGCCATGCCGAGAATaGCCAGTTGAGCCTTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFYLSFREWVFLLCFAVCRPCRE*PVEPCV Trigger: AACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCT...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACTTGCACAGTGGACAGTaGGGGGCGTGGTCCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLEILCLLLISIQTTEMYLHSGQ*GAWSRQ Trigger: TTGCCTGGACCACGCCCCTCACTGTCCACTGTGCAA...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGATTTGTTTCTTCATGTaGTCCTGGAGTGAAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GNGFFFYALQSVETLPAAICFFM*SWSEAN Trigger: GTTTGCTTCACTCCAGGATCACATGAAGAAACAAAT...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | CAAATTACACTAGGCATAACCATCAGGAAACAGAAGCTGTTAGGCAGTATGGGATGCCAAACCGCTTGGTaGCAGTTTCCATGCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QITLGITIRKQKLLGSMGCQTAW*QFPCIS Trigger: GGAGATGCATGGAAACTGGCACCAAGCGGTTTGGCA...TCCCATACTGCCTAACAGCTTCTGTTTCCTGATGGTTATGCCTAGTGTAATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGTTTACAATGCGTTTGGCTGTAAGTTTGACATCCCAATGGACACACATCTACTGGGGATTCGTCTaGCCTTCACACAGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLFTMRLAVSLTSQWTHIYWGFV*PSHRAS Trigger: AGAGGCCCTGTGTGAAGGCCAGACGAATCCCCAGTA...GATGTGTGTCCATTGGGATGTCAAACTTACAGCCAAACGCATTGTAAACAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTCTTTTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTGGCATCGACCCAAAATaGCTAAGAATTTGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSWKSHQHTWTMAQRSTGIDPK*LRICFF Trigger: GAAGAAACAAATTCTTAGCCATTTTGGGTCGATGCC...AGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGCGGCGGCAAGAATGTCTGGGTTATTCCAAATGACATTCCCAACATGCACTGGTTGTTAGCCATTTCTTaGCGACTATTCAGCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: GGGKNVWVIPNDIPNMHWLLAIS*RLFSLR Trigger: ACGTAAGCTGAATAGTCGCCAAGAAATGGCTAACAA...CCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTATCCTCTTCACAGTaGAGGCCCAGAATAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GNGFFFYALQSVETLPAALSSSQ*RPRIKY Trigger: ATATTTTATTCTGGGCCTCCACTGTGAAGAGGATAA...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTAGTCTGCATCTTTCTTaGGAATCTTCTCAGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EWVFLLCFAVCGNPACCVSLHLS*ESSQGY Trigger: ATACCCCTGAGAAGATTCCCAAGAAAGATGCAGACT...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | GAGCTTGCTCCAGTTTGTTCTAGGAATAACAATGGATaGGGAGGCATTTTACACAGCCACACAGCTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ELAPVCSRNNNG*GGILHSHTAST Trigger: TGTGCTAGCTGTGTGGCTGTGTAAAATGCCTCCCAATCCATTGTTATTCCTAGAACAAACTGGAGCAAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | GGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGATTAAAATTTCTGGTTaGCAACAGCTCAGAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNGFFFYALQSVETLPAAIKISG*QQLRKL Trigger: AAGCTTTCTGAGCTGTTGGCAACCAGAAATTTTAAT...CGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGTCTCTTCTGCTGCCTGCTGCTGTTACAATCCATCACTGTTAAAACTGTTGTTAGCCATTTCTTaGCGACTATTCAGCTTACGT | + |
|
Preference number: 4 (lower is better) Translates to: VRVSSAACCCYNPSLLKLLLAIS*RLFSLR Trigger: ACGTAAGCTGAATAGTCGCCAAGAAATGGCTAACAA...CAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | ATTCAGTATTTGGCAAATGTCCCACTTACCACCACATaGACAAGATTTTACAAAGTGCGCCGAAGAGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: IQYLANVPLTTT*TRFYKVRRRGR Trigger: CCGTCCTCTTCGGCGCACTTTGTAAAATCTTGTCAATGTGGTGGTAAGTGGGACATTTGCCAAATACTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | AGAGATTCTCAAGGATTTCTCACCTGTACCGTCTACTaGAACTTCAGTCGAATCTTGCACAGTGTCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDSQGFLTCTVY*NFSRILHSVQV Trigger: GACTTGGACACTGTGCAAGATTCGACTGAAGTTCAAGTAGACGGTACAGGTGAGAAATCCTTGAGAATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | CAAGTTCACGGCGACACACAGAACCCAAGTCCAGTTTaGGCTTGCTTATATCTTAATATGTCTGTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QVHGDTQNPSPV*ACLYLNMSVPT Trigger: AGTGGGAACAGACATATTAAGATATAAGCAAGCCAAAACTGGACTTGGGTTCTGTGTGTCGCCGTGAACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | AGCCACTTTTTCCAAAGCTCAGTGGACAAAAGTGTGTaGCGGTATAAGCTGTATGGAAGGAATGCTGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SHFFQSSVDKSV*RYKLYGRNAGQ Trigger: TTGACCAGCATTCCTTCCATACAGCTTATACCGCAACACACTTTTGTCCACTGAGCTTTGGAAAAAGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | ACTTTGTTTACAATGCGTTTGGCTGTAAGTTTGACATCCCAATGGACACACATCAACGCTCAAGGCATTTaGGGCAAAACGTATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLFTMRLAVSLTSQWTHINAQGI*GKTYVH Trigger: GTGGACATACGTTTTGCCTCAAATGCCTTGAGCGTT...GATGTGTGTCCATTGGGATGTCAAACTTACAGCCAAACGCATTGTAAACAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | TGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTTCCTTTATCTCCAACATaGACCCATACTCTGAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CTGGWELHLSLSDGNSPVPLSPT*THTLKS Trigger: GGATTTCAGAGTATGGGTGCATGTTGGAGATAAAGG...AACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | CCAACATGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCAATCCAGAAAGAATCTaGGCTTTTATATGGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTCTGGWELHLSLSDGNSNPERI*AFIWCP Trigger: GGGGCACCATATAAAAGCCCAGATTCTTTCTGGATT...GGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCATGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGGGTCTCTTCTGCTGCCTGCTGCTGTTACAATCCATCACTGTTAAAACTGTTATCCTCTTCACAGTaGAGGCCCAGAATAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: VRVSSAACCCYNPSLLKLLSSSQ*RPRIKY Trigger: ATATTTTATTCTGGGCCTCCACTGTGAAGAGGATAA...CAGTTTTAACAGTGATGGATTGTAACAGCAGCAGGCAGCAGAAGAGACCCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTAAGTTCTTCAAACTCTaGACCTTCCACCTTCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFYLSFREWVFLLCFAVCKFFKL*TFHLLV Trigger: GACGAGAAGGTGGAAGGTCCAGAGTTTGAAGAACTT...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | TATCACATCGAGATACTAGCTAGGATTGTATCACCTTaGATACCGAAGTCACATGTCACCCATGTGAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: YHIEILARIVSP*IPKSHVTHVNV Trigger: GACGTTCACATGGGTGACATGTGACTTCGGTATCAAAGGTGATACAATCCTAGCTAGTATCTCGATGTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | CAAATGACATTCCCAACATGCACTGGAGGTTGGGAGTaGCACTTATCATTATCTGATGGAAATTCCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QMTFPTCTGGWE*HLSLSDGNSPV Trigger: AACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCATGTTGGGAATGTCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR GCA 90 bp | TGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTTGATGTTGAGGTTTGGTaGTCACTTTCTGAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTGGWELHLSLSDGNSPVDVEVW*SLSEVE Trigger: TTCAACTTCAGAAAGTGAGCACCAAACCTCAACATC...AACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACTTCACACAGGGCCTCTaGTCCAGTTTCAGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLEILCLLLISIQTTEMYFTQGL*SSFSGR Trigger: TCTTCCACTGAAACTGGACCAGAGGCCCTGTGTGAA...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTAGTCTGCATCTTTCTTaGGAATCTTCTCAGGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFYLSFREWVFLLCFAVCSLHLS*ESSQGY Trigger: ATACCCCTGAGAAGATTCCCAAGAAAGATGCAGACT...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACACATGCCAAACCGCTTaGTGCCAGTTTCCATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLEILCLLLISIQTTEMYTCQTA*CQFPCI Trigger: GATGCATGGAAACTGGCACCAAGCGGTTTGGCATGT...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACAACGCTCAAGGCATTTaGGGCAAAACGTATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLEILCLLLISIQTTEMYNAQGI*GKTYVH Trigger: GTGGACATACGTTTTGCCTCAAATGCCTTGAGCGTT...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTATTTGTTTCTTCATGTaGTCCTGGAGTGAAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFYLSFREWVFLLCFAVCICFFM*SWSEAN Trigger: GTTTGCTTCACTCCAGGATCACATGAAGAAACAAAT...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGATGTTGAGGTTTGGTaGTCACTTTCTGAAGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFYLSFREWVFLLCFAVCDVEVW*SLSEVE Trigger: TTCAACTTCAGAAAGTGAGCACCAAACCTCAACATC...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGCATCGACCCAAAATaGCTAAGAATTTGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFYLSFREWVFLLCFAVCGIDPK*LRICFF Trigger: GAAGAAACAAATTCTTAGCCATTTTGGGTCGATGCC...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR GCA 90 bp | TCAGTGGACAAAAGTGTGTTGCGGTATAAGCTGTATGGAAGGAATGCTGGTCAAATTAAAATTTCTGGTTaGCAACAGCTCAGAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVDKSVLRYKLYGRNAGQIKISG*QQLRKL Trigger: AAGCTTTCTGAGCTGTTGGCAACCAGAAATTTTAAT...TTGACCAGCATTCCTTCCATACAGCTTATACCGCAACACACTTTTGTCCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | GGAATTCCTGTCTCACCCAAGAGAATCAGAAACTATTaGAGTTTTCTCTGGCCTGTAACAAAAGGTAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GIPVSPKRIRNY*SFLWPVTKGKH Trigger: ATGCTTACCTTTTGTTACAGGCCAGAGAAAACTCAAATAGTTTCTGATTCTCTTGGGTGAGACAGGAATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | GTCTGGAACAGTAAACTTCTCTCTCAATGGTATTCATaGTTAGCTGCCATTTATAAATCGACACCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VWNSKLLSQWYS*LAAIYKSTPST Trigger: TGTACTGGGTGTCGATTTATAAATGGCAGCTAACAATGAATACCATTGAGAGAGAAGTTTACTGTTCCAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | TGCGTTCCAGTCAAACATAGCATCTTTGGAAATCCTTaGTCTCCTTCTAATCTCCATACAAACTACGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVPVKHSIFGNP*SPSNLHTNYGN Trigger: ATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGATGCTATGTTTGACTGGAACGCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| 3UTR CAA 72 bp | CAGTTGAATAAAGATAAAACTTTGTTTACAATGCGTTaGGCTGTAAGTTTGACATCCCAATGGACACACATC | + |
|
Preference number: 4 (lower is better) Translates to: QLNKDKTLFTMR*AVSLTSQWTHI Trigger: GATGTGTGTCCATTGGGATGTCAAACTTACAGCCAAACGCATTGTAAACAAAGTTTTATCTTTATTCAACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 90 bp | GACGCTCTTTCAGGGAGGCCATGCCGAGAATGGCCAGTTGAGCCTTaGGTTCCAAGGGCAACACGGCCAGAATCCACCAGGACCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DALSGRPCREWPVEP*VPRATRPESTRTRQ Trigger: CTGCCTGGTCCTGGTGGATTCTGGCCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS TCA 90 bp | GCCAGAAGACGCTCTTTCAGGGAGGCCATGCCGAGAATGGCCAGTTaGGCCTTGCGTTCCAAGGGCAACACGGCCAGAATCCACCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARRRSFREAMPRMAS*ALRSKGNTARIHQD Trigger: GTCCTGGTGGATTCTGGCCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGTCTTCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 90 bp | CCTCATCGTCCTGGGCATCACTGGGAAGCTGCCTCTTCAAGGTGCTaGTGGGTGCCGCTGGGACGATGCCTTCCAGAGCCTTTTTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: PHRPGHHWEAASSRC*WVPLGRCLPEPFYP Trigger: AGGATAAAAAGGCTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACGATGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS CCA 90 bp | GTCGAATGGCCAGAAGACGCTCTTTCAGGGAGGCCATGCCGAGAATaGCCAGTTGAGCCTTGCGTTCCAAGGGCAACACGGCCAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VEWPEDALSGRPCRE*PVEPCVPRATRPES Trigger: GGATTCTGGCCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGTCTTCTGGCCATTCGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 90 bp | GGCATCACTGGGAAGCTGCCTCTTCAAGGTGCTGCTGGGTGCCGCTaGGACGATGCCTTCCAGAGCCTTTTTATCCTCTTCACAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GITGKLPLQGAAGCR*DDAFQSLFILFTVE Trigger: CTCCACTGTGAAGAGGATAAAAAGGCTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 90 bp | CATCGTCCTGGGCATCACTGGGAAGCTGCCTCTTCAAGGTGCTGCTaGGTGCCGCTGGGACGATGCCTTCCAGAGCCTTTTTATCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRPGHHWEAASSRCC*VPLGRCLPEPFYPL Trigger: AAGAGGATAAAAAGGCTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 90 bp | TTGGGAATCTTCTCAGGGGTATTCGCTTTGAGCTCCTCATCGTCCTaGGCATCACTGGGAAGCTGCCTCTTCAAGGTGCTGCTGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGIFSGVFALSSSSS*ASLGSCLFKVLLGA Trigger: GGCACCCAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACGATGAGGAGCTCAAAGCGAATACCCCTGAGAAGATTCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 90 bp | GGCCAGAATCCACCAGGACCAGGCAGGGCCACTAGAATTGCTCTGTaGCTCTGGCTCCCTGTCTGGCATCGACCCAAAATGGCTAAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GQNPPGPGRATRIAL*LWLPVWHRPKMAKN Trigger: ATTCTTAGCCATTTTGGGTCGATGCCAGACAGGGAGCCAGAGCCACAGAGCAATTCTAGTGGCCCTGCCTGGTCCTGGTGGATTCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 90 bp | CTAATATTCGTCGAATGGCCAGAAGACGCTCTTTCAGGGAGGCCATaGCGAGAATGGCCAGTTGAGCCTTGCGTTCCAAGGGCAACACGG | + |
|
Preference number: 5 (lower is better) Translates to: LIFVEWPEDALSGRP*REWPVEPCVPRATR Trigger: CCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGTCTTCTGGCCATTCGACGAATATTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 90 bp | GCAGCCTCATGCACAGCGCACACTCAAAGTCAGTCGCATCGATTGTaGACTCTGGCTCTTCCTCTAACGAGCTCGCATTCCTCTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AASCTAHTQSQSHRL*TLALPLTSSHSSEV Trigger: CACCTCAGAGGAATGCGAGCTCGTTAGAGGAAGAGCCAGAGTTCACAATCGATGCGACTGACTTTGAGTGTGCGCTGTGCATGAGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 90 bp | ATCTCGGTGGCGGTGGCTCAGGACTCTGAAGCGGCTGATCCCAATTaGATCCACAACAGAGCTTCCATCAGGGAAAGTCCTGACATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ISVAVAQDSEAADPN*IHNRASIRESPDIL Trigger: AAGGATGTCAGGACTTTCCCTGATGGAAGCTCTGTTGTGGATGCAATTGGGATCAGCCGCTTCAGAGTCCTGAGCCACCGCCACCGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 90 bp | CTGCTGGTAAACAGACTCATGGAGGGCGGTAAGTTCTTCAAACTCTaGACCTTCCACCTTCTCGTCCTCCAGGTACTCGATGTCCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLVNRLMEGGKFFKL*TFHLLVLQVLDVRR Trigger: ACGGCGGACATCGAGTACCTGGAGGACGAGAAGGTGGAAGGTCCAGAGTTTGAAGAACTTACCGCCCTCCATGAGTCTGTTTACCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 90 bp | GGGAGTCTGCATCTTTCTTGGGAATCTTCTCAGGGGTATTCGCTTTaGGCTCCTCATCGTCCTGGGCATCACTGGGAAGCTGCCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSLHLSWESSQGYSL*APHRPGHHWEAASS Trigger: TGAAGAGGCAGCTTCCCAGTGATGCCCAGGACGATGAGGAGCTCAAAGCGAATACCCCTGAGAAGATTCCCAAGAAAGATGCAGACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 90 bp | GCATCTGACTTCTCAGATGGAGTCTTAGGATTGTCTGCATTAGCGTaGCCGCCTGCTTCTTCCAGAGGATACTGGGGATTCGTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASDFSDGVLGLSALA*PPASSRGYWGFVWP Trigger: AGGCCAGACGAATCCCCAGTATCCTCTGGAAGAAGCAGGCGGTCACGCTAATGCAGACAATCCTAAGACTCCATCTGAGAAGTCAGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 90 bp | AAAATTTCTGGTTGCCAACAGCTCAGAAAGCTTGTCCTTGCACAGTaGACAGTGAGGGGCGTGGTCCAGGCAACGCTCAAGGCATTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KISGCQQLRKLVLAQ*TVRGVVQATLKAFE Trigger: CTCAAATGCCTTGAGCGTTGCCTGGACCACGCCCCTCACTGTCCACTGTGCAAGGACAAGCTTTCTGAGCTGTTGGCAACCAGAAATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | GTATCACAAGTGAACGAGGCAGGACTAGGCAGCTTTGCAACCTACCGATTAGCCCACATGCCAAACCGCTaGGTGCCAGTTTCCATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSQVNEAGLGSFATYRLAHMPNR*VPVSMH Trigger: ATGCATGGAAACTGGCACCAAGCGGTTTGGCATGTG...GGCTAATCGGTAGGTTGCAAAGCTGCCTAGTCCTGCCTCGTTCACTTGTGATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | TTCTTGGAAAAGCCACCAGCACACCTGGACCATGGCACAGAGGTCTACTACAGCCAACGCTCAAGGCATTaGAGGCAAAACGTATGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLEKPPAHLDHGTEVYYSQRSRH*RQNVCP Trigger: TGGACATACGTTTTGCCTCAAATGCCTTGAGCGTTG...GCTGTAGTAGACCTCTGTGCCATGGTCCAGGTGTGCTGGTGGCTTTTCCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CAA 90 bp | AGCCCATATGGTACGGGAGTCATGGCAACAAGGAGCCAGAGCAGGAAGCCGAGATTATCTCTCTGTGTGTaGTTAGCCATTTCTTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPYGTGVMATRSQSRKPRLSLCV*LAISWR Trigger: TCGCCAAGAAATGGCTAACAACACACAGAGAGATAA...TCTCGGCTTCCTGCTCTGGCTCCTTGTTGCCATGACTCCCGTACCATATGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 90 bp | GTCTTCCCAATCCAGAAAGAATCTGGGCTTTTATATGGTGCCCCTTaGTCAGGAGAGGTTCCCTCTGACAAACTGCTTCAGCATCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VFPIQKESGLLYGAP*SGEVPSDKLLQHPA Trigger: TGCAGGATGCTGAAGCAGTTTGTCAGAGGGAACCTCTCCTGACCAAGGGGCACCATATAAAAGCCCAGATTCTTTCTGGATTGGGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | GGCGGCGGCAAGAATGTCTGGGTTATTCCAAATGACATTCCCAACATGCACTGGTCTTTCTTCGCCGAGTaGCACTCAGGGTTTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGGKNVWVIPNDIPNMHWSFFAE*HSGFKA Trigger: TGCTTTAAACCCTGAGTGCAACTCGGCGAAGAAAGA...CCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CAA 90 bp | GGCGGCGGCAAGAATGTCTGGGTTATTCCAAATGACATTCCCAACATGCACTGGGAGTCTGCATCTTTCTaGGGAATCTTCTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGGKNVWVIPNDIPNMHWESASF*GIFSGV Trigger: TACCCCTGAGAAGATTCCCAAGAAAGATGCAGACTC...CCAGTGCATGTTGGGAATGTCATTTGGAATAACCCAGACATTCTTGCCGCCGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CAA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTACATCTCTGGTCAGATaGGACAGCTCTGACATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: EWVFLLCFAVCGNPACCVTSLVR*DSSDIS Trigger: AGAGATGTCAGAGCTGTCCAATCTGACCAGAGATGT...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTCACATGCCAAACCGCTaGGTGCCAGTTTCCATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LFYLSFREWVFLLCFAVCHMPNR*VPVSMH Trigger: ATGCATGGAAACTGGCACCAAGCGGTTTGGCATGTG...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS GCA 90 bp | CACAGGGCCTCTGGTCCAGTTTCAGTGGAAGATGTTGAGGTTTGGTaGTCACTTTCTGAAGTTGAAAAGAACACCTCACATATTACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HRASGPVSVEDVEVW*SLSEVEKNTSHITF Trigger: GAAGGTAATATGTGAGGTGTTCTTTTCAACTTCAGAAAGTGAGCACCAAACCTCAACATCTTCCACTGAAACTGGACCAGAGGCCCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS CCA 90 bp | TCACACAGGGCCTCTGGTCCAGTTTCAGTGGAAGATGTTGAGGTTTaGTGCTCACTTTCTGAAGTTGAAAAGAACACCTCACATATTACC | + |
|
Preference number: 5 (lower is better) Translates to: SHRASGPVSVEDVEV*CSLSEVEKNTSHIT Trigger: GGTAATATGTGAGGTGTTCTTTTCAACTTCAGAAAGTGAGCACCAAACCTCAACATCTTCCACTGAAACTGGACCAGAGGCCCTGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CAA 90 bp | TCAGTGGACAAAAGTGTGTTGCGGTATAAGCTGTATGGAAGGAATGCTGGTCAAGAGTCTGCATCTTTCTaGGGAATCTTCTCAGGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SVDKSVLRYKLYGRNAGQESASF*GIFSGV Trigger: TACCCCTGAGAAGATTCCCAAGAAAGATGCAGACTC...TTGACCAGCATTCCTTCCATACAGCTTATACCGCAACACACTTTTGTCCACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147695.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTTCTTTCTTCGCCGAGTaGCACTCAGGGTTTAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFYLSFREWVFLLCFAVCSFFAE*HSGFKA Trigger: TGCTTTAAACCCTGAGTGCAACTCGGCGAAGAAAGA...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
||
| CDS-3UTR CAA 90 bp | GAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTGGAAACCCTGCCTGCTGCGTTGCTCACTTTCTGAAGTaGAAAAGAACACCTCACATA | + |
|
Preference number: 5 (lower is better) Translates to: EWVFLLCFAVCGNPACCVAHFLK*KRTPHI Trigger: TATGTGAGGTGTTCTTTTCAACTTCAGAAAGTGAGC...AACGCAGCAGGCAGGGTTTCCACAGACTGCAAAGCATAGAAGAAAAACCCATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTACATCTCTGGTCAGATaGGACAGCTCTGACATCTCT | + |
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Preference number: 5 (lower is better) Translates to: LFYLSFREWVFLLCFAVCTSLVR*DSSDIS Trigger: AGAGATGTCAGAGCTGTCCAATCTGACCAGAGATGT...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | CCAACATGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCTTTCAGTGGAAGATGTaGAGGTTTGGTGCTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: PTCTGGWELHLSLSDGNSFQWKM*RFGAHF Trigger: AAAGTGAGCACCAAACCTCAACATCTTCCACTGAAA...GGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCATGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | TGCACTGGAGGTTGGGAGTTGCACTTATCATTATCTGATGGAAATTCCCCAGTTGCTCACTTTCTGAAGTaGAAAAGAACACCTCACATA | + |
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Preference number: 5 (lower is better) Translates to: CTGGWELHLSLSDGNSPVAHFLK*KRTPHI Trigger: TATGTGAGGTGTTCTTTTCAACTTCAGAAAGTGAGC...AACTGGGGAATTTCCATCAGATAATGATAAGTGCAACTCCCAACCTCCAGTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | CTCTTCTACCTCAGCTTTAGGGAATGGGTTTTTCTTCTATGCTTTGCAGTCTGTTTATCTCTCTGTGTGTaGTTAGCCATTTCTTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: LFYLSFREWVFLLCFAVCLSLCV*LAISWR Trigger: TCGCCAAGAAATGGCTAACAACACACAGAGAGATAA...ACAGACTGCAAAGCATAGAAGAAAAACCCATTCCCTAAAGCTGAGGTAGAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS-3UTR CAA 90 bp | TCTTTGGAAATCCTTTGTCTCCTTCTAATCTCCATACAAACTACGGAAATGTACCAACGCTCAAGGCATTaGAGGCAAAACGTATGTCCA | + |
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Preference number: 5 (lower is better) Translates to: SLEILCLLLISIQTTEMYQRSRH*RQNVCP Trigger: TGGACATACGTTTTGCCTCAAATGCCTTGAGCGTTG...GTACATTTCCGTAGTTTGTATGGAGATTAGAAGGAGACAAAGGATTTCCAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 72 bp | CGTCCTGGGCATCACTGGGAAGCTGCCTCTTCAAGGTaGTGCTGGGTGCCGCTGGGACGATGCCTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RPGHHWEAASSR*CWVPLGRCLPE Trigger: CTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 72 bp | TTGAGCTCCTCATCGTCCTGGGCATCACTGGGAAGCTaGCTCTTCAAGGTGCTGCTGGGTGCCGCTGGGACG | + |
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Preference number: 6 (lower is better) Translates to: LSSSSSWASLGS*LFKVLLGAAGT Trigger: CGTCCCAGCGGCACCCAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACGATGAGGAGCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 72 bp | TCAGGGAGGCCATGCCGAGAATGGCCAGTTGAGCCTTaGGTTCCAAGGGCAACACGGCCAGAATCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SGRPCREWPVEP*VPRATRPESTR Trigger: CCTGGTGGATTCTGGCCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | GGGCATCACTGGGAAGCTGCCTCTTCAAGGTGCTGCTaGGTGCCGCTGGGACGATGCCTTCCAGAGCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GHHWEAASSRCC*VPLGRCLPEPF Trigger: AAAAGGCTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CAA 90 bp | GGCCAGAAGACGCTCTTTCAGGGAGGCCATGCCGAGAATGGCCAGTaGAGCCTTGCGTTCCAAGGGCAACACGGCCAGAATCCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GQKTLFQGGHAENGQ*SLAFQGQHGQNPPG Trigger: TCCTGGTGGATTCTGGCCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGTCTTCTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 72 bp | CGCTCTTTCAGGGAGGCCATGCCGAGAATGGCCAGTTaGGCCTTGCGTTCCAAGGGCAACACGGCCAGAATC | + |
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Preference number: 6 (lower is better) Translates to: RSFREAMPRMAS*ALRSKGNTARI Trigger: GATTCTGGCCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | CCAGAAGACGCTCTTTCAGGGAGGCCATGCCGAGAATaGCCAGTTGAGCCTTGCGTTCCAAGGGCAACACGG | + |
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Preference number: 6 (lower is better) Translates to: PEDALSGRPCRE*PVEPCVPRATR Trigger: CCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGTCTTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 72 bp | ACCGCTTGGTGCCAGTTTCCATGCATCTCCTTATCATaGGCCGGTAGCGGGGCTCGAACACATGGAGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TAWCQFPCISLS*AGSGARTHGEG Trigger: GCCCTCTCCATGTGTTCGAGCCCCGCTACCGGCTCATGATAAGGAGATGCATGGAAACTGGCACCAAGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 72 bp | GTCGAATGGCCAGAAGACGCTCTTTCAGGGAGGCCATaGCGAGAATGGCCAGTTGAGCCTTGCGTTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VEWPEDALSGRP*REWPVEPCVPR Trigger: CCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGTCTTCTGGCCATTCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | GGTTGCCAACAGCTCAGAAAGCTTGTCCTTGCACAGTaGACAGTGAGGGGCGTGGTCCAGGCAACGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: GCQQLRKLVLAQ*TVRGVVQATLK Trigger: CTTGAGCGTTGCCTGGACCACGCCCCTCACTGTCCACTGTGCAAGGACAAGCTTTCTGAGCTGTTGGCAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CAA 72 bp | ACGCTCTTTCAGGGAGGCCATGCCGAGAATGGCCAGTaGAGCCTTGCGTTCCAAGGGCAACACGGCCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: TLFQGGHAENGQ*SLAFQGQHGQN Trigger: ATTCTGGCCGTGTTGCCCTTGGAACGCAAGGCTCAACTGGCCATTCTCGGCATGGCCTCCCTGAAAGAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 72 bp | GCCTCTTCAAGGTGCTGCTGGGTGCCGCTGGGACGATaGCTTCCAGAGCCTTTTTATCCTCTTCACAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: ASSRCCWVPLGR*LPEPFYPLHSG Trigger: TCCACTGTGAAGAGGATAAAAAGGCTCTGGAAGGCATCGTCCCAGCGGCACCCAGCAGCACCTTGAAGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 72 bp | GCGGTGGCTCAGGACTCTGAAGCGGCTGATCCCAATTaGATCCACAACAGAGCTTCCATCAGGGAAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: AVAQDSEAADPN*IHNRASIRESP Trigger: AGGACTTTCCCTGATGGAAGCTCTGTTGTGGATGCAATTGGGATCAGCCGCTTCAGAGTCCTGAGCCACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | TTCTCAGGGGTATTCGCTTTGAGCTCCTCATCGTCCTaGGCATCACTGGGAAGCTGCCTCTTCAAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSGVFALSSSSS*ASLGSCLFKVL Trigger: CAGCACCTTGAAGAGGCAGCTTCCCAGTGATGCCCAGGACGATGAGGAGCTCAAAGCGAATACCCCTGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CAA 90 bp | GGGGAGTCTGCATCTTTCTTGGGAATCTTCTCAGGGGTATTCGCTTaGAGCTCCTCATCGTCCTGGGCATCACTGGGAAGCTGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GESASFLGIFSGVFA*SSSSSWASLGSCLF Trigger: GAAGAGGCAGCTTCCCAGTGATGCCCAGGACGATGAGGAGCTCAAAGCGAATACCCCTGAGAAGATTCCCAAGAAAGATGCAGACTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 72 bp | TGCACAGCGCACACTCAAAGTCAGTCGCATCGATTGTaGACTCTGGCTCTTCCTCTAACGAGCTCGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: CTAHTQSQSHRL*TLALPLTSSHS Trigger: GGAATGCGAGCTCGTTAGAGGAAGAGCCAGAGTTCACAATCGATGCGACTGACTTTGAGTGTGCGCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS GCA 72 bp | ACTCTGAAATCCCTGCGTTCTCCGCGGATAAACACATaGCAAACCGCTTGGTGCCAGTTTCCATGCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: TLKSLRSPRINT*QTAWCQFPCIS Trigger: GGAGATGCATGGAAACTGGCACCAAGCGGTTTGGCATGTGTTTATCCGCGGAGAACGCAGGGATTTCAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CAA 72 bp | GCATCTTTCTTGGGAATCTTCTCAGGGGTATTCGCTTaGAGCTCCTCATCGTCCTGGGCATCACTGGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: ASFLGIFSGVFA*SSSSSWASLGS Trigger: GCTTCCCAGTGATGCCCAGGACGATGAGGAGCTCAAAGCGAATACCCCTGAGAAGATTCCCAAGAAAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 72 bp | CATCTTTCTTGGGAATCTTCTCAGGGGTATTCGCTTTaGGCTCCTCATCGTCCTGGGCATCACTGGGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: HLSWESSQGYSL*APHRPGHHWEA Trigger: AGCTTCCCAGTGATGCCCAGGACGATGAGGAGCTCAAAGCGAATACCCCTGAGAAGATTCCCAAGAAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 72 bp | AACTCTGGCTCTTCCTCTAACGAGCTCGCATTCCTCTaGGGTGGGGAGTCTGCATCTTTCTTGGGAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: NSGSSSNELAFL*GGESASFLGIF Trigger: GAAGATTCCCAAGAAAGATGCAGACTCCCCACCTCAGAGGAATGCGAGCTCGTTAGAGGAAGAGCCAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | TCTGGCCTTCACACAGGGCCTCTGGTCCAGTTTCAGTaGAAGATGTTGAGGTTTGGTGCTCACTTTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SGLHTGPLVQFQ*KMLRFGAHFLK Trigger: CTTCAGAAAGTGAGCACCAAACCTCAACATCTTCCACTGAAACTGGACCAGAGGCCCTGTGTGAAGGCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | AACAGACTCATGGAGGGCGGTAAGTTCTTCAAACTCTaGACCTTCCACCTTCTCGTCCTCCAGGTACTCGAT | + |
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Preference number: 6 (lower is better) Translates to: NRLMEGGKFFKL*TFHLLVLQVLD Trigger: ATCGAGTACCTGGAGGACGAGAAGGTGGAAGGTCCAGAGTTTGAAGAACTTACCGCCCTCCATGAGTCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 72 bp | TTCTCAGATGGAGTCTTAGGATTGTCTGCATTAGCGTaGCCGCCTGCTTCTTCCAGAGGATACTGGGGATTC | + |
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Preference number: 6 (lower is better) Translates to: FSDGVLGLSALA*PPASSRGYWGF Trigger: GAATCCCCAGTATCCTCTGGAAGAAGCAGGCGGTCACGCTAATGCAGACAATCCTAAGACTCCATCTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | ATCCAGAAAGAATCTGGGCTTTTATATGGTGCCCCTTaGTCAGGAGAGGTTCCCTCTGACAAACTGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: IQKESGLLYGAP*SGEVPSDKLLQ Trigger: CTGAAGCAGTTTGTCAGAGGGAACCTCTCCTGACCAAGGGGCACCATATAAAAGCCCAGATTCTTTCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS TCA 72 bp | TTGCATCCACAACAGAGCTTCCATCAGGGAAAGTCCTaGCATCCTTTATCTCCAACATGCACCCATACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LHPQQSFHQGKS*HPLSPTCTHTL Trigger: CAGAGTATGGGTGCATGTTGGAGATAAAGGATGTCAGGACTTTCCCTGATGGAAGCTCTGTTGTGGATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CAA 72 bp | CACACAGGGCCTCTGGTCCAGTTTCAGTGGAAGATGTaGAGGTTTGGTGCTCACTTTCTGAAGTTGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: HTGPLVQFQWKM*RFGAHFLKLKR Trigger: TCTTTTCAACTTCAGAAAGTGAGCACCAAACCTCAACATCTTCCACTGAAACTGGACCAGAGGCCCTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | AACACTTCTCTATGTCTTCCCAATCCAGAAAGAATCTaGGCTTTTATATGGTGCCCCTTGGTCAGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: NTSLCLPNPERI*AFIWCPLVRRG Trigger: ACCTCTCCTGACCAAGGGGCACCATATAAAAGCCCAGATTCTTTCTGGATTGGGAAGACATAGAGAAGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CCA 72 bp | GCCTCTGGTCCAGTTTCAGTGGAAGATGTTGAGGTTTaGTGCTCACTTTCTGAAGTTGAAAAGAACACCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASGPVSVEDVEV*CSLSEVEKNTS Trigger: TGAGGTGTTCTTTTCAACTTCAGAAAGTGAGCACCAAACCTCAACATCTTCCACTGAAACTGGACCAGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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| CDS CAA 90 bp | CAGTTTCAGTGGAAGATGTTGAGGTTTGGTGCTCACTTTCTGAAGTaGAAAAGAACACCTCACATATTACCTTCTGTGTTTCTTTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: QFQWKMLRFGAHFLK*KRTPHILPSVFLSS Trigger: CGAAGAAAGAAACACAGAAGGTAATATGTGAGGTGTTCTTTTCAACTTCAGAAAGTGAGCACCAAACCTCAACATCTTCCACTGAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039612.5 ENSMUST00000147695.9 |
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