Pregenerated sensors for LONRF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039633Ensembl transcript IDs: ENSMUST00000065297.6, ENSMUST00000239119.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATGCACAGTACCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTaGCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCAT | + |
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Preference number: 1 (lower is better) Translates to: GCTVPCVRFAVVPGD*LEIQHPCLPATGMH Trigger: ATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGGTACTGTGCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR CCA 90 bp | TATGAATGGATGCACAGTACCATGTGTCAGGTTTGCAGTTGTTCCTaGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGG | + |
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Preference number: 1 (lower is better) Translates to: YEWMHSTMCQVCSCS*RLARDSASLPAGYW Trigger: CCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGGTACTGTGCATCCATTCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR TCA 90 bp | CAGTGCGTGTTTTCTGTGCAAGTTCTTAGTGGTCTGGGACCTAGTTaGAGGTATTCATTTGCAGATCCACGAGATTCAGGAGGTTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: QCVFSVQVLSGLGPS*RYSFADPRDSGGLK Trigger: CTTTAAACCTCCTGAATCTCGTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCACAGAAAACACGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACAACCAGCACTGGGTGTaGAAAAGGCAGCGGGCAATC | + |
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Preference number: 2 (lower is better) Translates to: ESYSKLLHLPQILDRFIHNQHWV*KRQRAI Trigger: GATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTTCTTAAACCAGCACTaGGTGTGCAAAAGGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: ESYSKLLHLPQILDRFIHFLNQH*VCKRQR Trigger: CCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAGAA...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTACATAAACCAGCACTGGGTGTaGAAAAGGCAGCGGGCAATC | + |
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Preference number: 2 (lower is better) Translates to: YSKLLHLPQILDRFIHYINQHWV*KRQRAI Trigger: GATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT...TATGTAGTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCGTGCAAAGAGAAGCATaGGGGAATAAATCTGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPVQREA*GNKSEA Trigger: TGCCTCAGATTTATTCCCCCATGCTTCTCTTTGCAC...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTAAGTTCTTAGTGGTCTaGGACCTAGTTGAAGGTATT | + |
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Preference number: 2 (lower is better) Translates to: SYDYRCKHGQQRAFSKSAKFLVV*DLVEGI Trigger: AATACCTTCAACTAGGTCCCAGACCACTAAGAACTT...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR CCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCAAGTTCTTAGTGGTCTaGGACCTAGTTGAAGGTATT | + |
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Preference number: 2 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPKFLVV*DLVEGI Trigger: AATACCTTCAACTAGGTCCCAGACCACTAAGAACTT...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACGTGTCAAACTCTAAATaGCATAGACGGGCAGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: ESYSKLLHLPQILDRFIHVSNSK*HRRAVN Trigger: ATTAACTGCCCGTCTATGTCATTTAGAGTTTGACAC...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTACATAACCATGTGTCAGGTTTaGAGTTGTTCCTGGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: YSKLLHLPQILDRFIHYITMCQV*SCSWRL Trigger: CAGTCTCCAGGAACAACTGCAAACCTGACACATGGT...TATGTAGTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTACATACTGCCTGCCGGCTACTaGGATGCATGTATTTACATA | + |
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Preference number: 2 (lower is better) Translates to: YSKLLHLPQILDRFIHYILPAGY*DACIYI Trigger: TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAG...TATGTAGTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR CCA 90 bp | AACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTTCTTAAACCAGCACTaGGTGTGCAAAAGGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: NICTKTRVKTKRTLQAESFLNQH*VCKRQR Trigger: CCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAGAA...GGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTACCATGTGTCAGGTTTaGAGTTGTTCCTGGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: TFAPRPESKQNEPYKLSPTMCQV*SCSWRL Trigger: CAGTCTCCAGGAACAACTGCAAACCTGACACATGGT...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR GCA 90 bp | AACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTTGAAGGTATTCATTTaGAGATCCACGAGATTCAGG | + |
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Preference number: 2 (lower is better) Translates to: NICTKTRVKTKRTLQAESLKVFI*RSTRFR Trigger: CCTGAATCTCGTGGATCTGCAAATGAATACCTTCAA...GGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR CCA 72 bp | GTACCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTaGCTCGAGATTCAGCATCCCTGCCTGCCGGCTACT | + |
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Preference number: 3 (lower is better) Translates to: VPCVRFAVVPGD*LEIQHPCLPAT Trigger: AGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR CCA 72 bp | ATGCACAGTACCATGTGTCAGGTTTGCAGTTGTTCCTaGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: MHSTMCQVCSCS*RLARDSASLPA Trigger: GGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGGTACTGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATAGTTGAAGGTATTCATTaGCAGATCCACGAGATTCAG | + |
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Preference number: 3 (lower is better) Translates to: ARDSASLPAGYWDACIYIVEGIH*QIHEIQ Trigger: CTGAATCTCGTGGATCTGCAAATGAATACCTTCAAC...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR GCA 72 bp | TTTTATGAATGGATGCACAGTACCATGTGTCAGGTTTaGAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: FYEWMHSTMCQV*SCSWRLARDSA Trigger: TGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGGTACTGTGCATCCATTCATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR TCA 72 bp | TTTTCTGTGCAAGTTCTTAGTGGTCTGGGACCTAGTTaGAGGTATTCATTTGCAGATCCACGAGATTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: FSVQVLSGLGPS*RYSFADPRDSG Trigger: TCCTGAATCTCGTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCACAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| 3UTR CCA 72 bp | TCACACATCCACGGAGTTCTTAGTTCATTCAGAATATaGTACATAGTGCAACTTCATCACAATGTCGAGGTT | + |
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Preference number: 3 (lower is better) Translates to: SHIHGVLSSFRI*YIVQLHHNVEV Trigger: AACCTCGACATTGTGATGAAGTTGCACTATGTACCATATTCTGAATGAACTAAGAACTCCGTGGATGTGTGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CCA 90 bp | AACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAGCCAGCGCTCCCTTCAGGTaGCCGCCCAGCGCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NQHWVCKRQRAIRLSTGASAPFR*PPSASS Trigger: GCTGCTGGCGCTGGGCGGCCACCTGAAGGGAGCGCT...GGCTCCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR GCA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGCAGGTCGCTGGGCTCTaGTCGCAGGGCGTCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPQVAGL*SQGVAG Trigger: GCCTGCGACGCCCTGCGAGCAGAGCCCAGCGACCTG...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR GCA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGCAGGTCGCTGGGCTCTaGTCGCAGGGCGTCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: LKPALGVQKAAGNPAVNWQVAGL*SQGVAG Trigger: GCCTGCGACGCCCTGCGAGCAGAGCCCAGCGACCTG...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTGGCGGAGCCGGTAGCTaGACACCAGGCAGTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSAGGAGS*TPGSPL Trigger: TAGTGGACTGCCTGGTGTTCAGCTACCGGCTCCGCC...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTTCTCCGCCAGGTGGTTaGGCACGACGCTGGTTCGGA | + |
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Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSASPPGG*ARRWFG Trigger: TCCGAACCAGCGTCGTGCTCAACCACCTGGCGGAGA...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTGCACTGCCGCTGCACTaGTGGCTTGTGCTGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSAALPLH*WLVLTG Trigger: CCCAGTCAGCACAAGCCATCAGTGCAGCGGCAGTGC...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCCGGCCGGAGAAGACATaGCCCGCACAGGGCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPRPEKT*PAQGCS Trigger: AGAGCAGCCCTGTGCGGGCCATGTCTTCTCCGGCCG...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065297.6 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACGTCACACATCCACGGAGTTCTTAGTTCGCGCGCGCTCGCGCTaGCCCGGGAACCACTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTRHTSTEFLVRARSR*PGNHFS Trigger: GGAGAAGTGGTTCCCGGGCCAGCGCGAGCGCGCGCG...AACTAAGAACTCCGTGGATGTGTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CCA 90 bp | AACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAGCCATGGCTTGTGCTGACTaGGCGCGGCTTAAGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: NQHWVCKRQRAIRLSTGAMACAD*ARLKLP Trigger: AGGAAGCTTAAGCCGCGCCCAGTCAGCACAAGCCAT...GGCTCCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGGGACCTTCCCTTTCCTaGAGTAGACCTCGGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPGPSLS*SRPRAS Trigger: ACTGGCCCGAGGTCTACTTCAGGAAAGGGAAGGTCC...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTGGACCTTCCCTTTCCTaGAGTAGACCTCGGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSAGPSLS*SRPRAS Trigger: ACTGGCCCGAGGTCTACTTCAGGAAAGGGAAGGTCC...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGGGCTTAAGCTTCCTTTaGCAGGCTCTGGGGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: LKPALGVQKAAGNPAVNWGLSFL*QALGHP Trigger: AGGATGCCCCAGAGCCTGTCAAAGGAAGCTTAAGCC...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCCCTCCAGCAGCTGGGTaGCACAGTACCTCCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPPPAAG*HSTSCL Trigger: CAGACAGGAGGTACTGTGTCACCCAGCTGCTGGAGG...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTCACTTCTCCGCCAGGTaGTTGAGCACGACGCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSAHFSAR*LSTTLV Trigger: AACCAGCGTCGTGCTCAACCACCTGGCGGAGAAGTG...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATACCTCCAGCAGCTGGGTaGCACAGTACCTCCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: ARDSASLPAGYWDACIYIPPAAG*HSTSCL Trigger: CAGACAGGAGGTACTGTGTCACCCAGCTGCTGGAGG...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR GCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTCAGCCACCAACACCATaGAGGTCCATTGGGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSAQPPTP*RSIGCC Trigger: GCAACACCCAATGGACCTGCATGGTGTTGGTGGCTG...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACGTCACACATCCACGGAGTTCTTAGTTGGCGGAGCCGGTAGCTaGACACCAGGCAGTCCACTA | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTRHTSTEFLVGGAGS*TPGSPL Trigger: TAGTGGACTGCCTGGTGTTCAGCTACCGGCTCCGCC...AACTAAGAACTCCGTGGATGTGTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACGTCACACATCCACGGAGTTCTTAGTTGCACTGCCGCTGCACTaGTGGCTTGTGCTGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTRHTSTEFLVALPLH*WLVLTG Trigger: CCCAGTCAGCACAAGCCATCAGTGCAGCGGCAGTGC...AACTAAGAACTCCGTGGATGTGTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR GCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTACTCGTTCTTCAGGCTaGTTCAGGCCAAGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSATRSSG*FRPSSA Trigger: TGCTGAGCTTGGCCTGAAGCAGCCTGAAGAACGAGT...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACGTCACACATCCACGGAGTTCTTAGTTCTCCCTGGCAGGCACTaGCGCTGCACTGATGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTRHTSTEFLVLPGRH*RCTDGL Trigger: CAAGCCATCAGTGCAGCGGCAGTGCCTGCCAGGGAG...AACTAAGAACTCCGTGGATGTGTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CCA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGACCATGCAGGTCCATTaGGTGTTGCCTGGAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPTMQVH*VLPGGF Trigger: AAAACCTCCAGGCAACACCCAATGGACCTGCATGGT...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCGGCCAGTTGGGAAGCTaGAAGAGAACTGCGTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPGQLGS*KRTAFR Trigger: TCTGAACGCAGTTCTCTTTCAGCTTCCCAACTGGCC...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR GCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCACTCGTTCTTCAGGCTaGTTCAGGCCAAGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPTRSSG*FRPSSA Trigger: TGCTGAGCTTGGCCTGAAGCAGCCTGAAGAACGAGT...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGACGCACATCCCGAACTaGTTGGTTCCAGTTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LKPALGVQKAAGNPAVNWTHIPN*LVPVWI Trigger: TATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGT...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACAACCAGCTGCAGGCTTaGGAGTACACCGAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ESYSKLLHLPQILDRFIHNQLQA*EYTESW Trigger: CCATGACTCGGTGTACTCGCAAGCCTGCAGCTGGTT...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACAGAAAGCCGGCATCCTaGAGGACCTTCCCTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESYSKLLHLPQILDRFIHRKPAS*RTFPFL Trigger: CAGGAAAGGGAAGGTCCTCCAGGATGCCGGCTTTCT...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATATCCTTTGACAGGCTCTaGGGCATCCTCCACTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARDSASLPAGYWDACIYISFDRL*GILHSF Trigger: GAACGAGTGGAGGATGCCCCAGAGCCTGTCAAAGGA...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACTCTCCGCCAGGTGGTTaGGCACGACGCTGGTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHSPPGG*ARRWFG Trigger: TCCGAACCAGCGTCGTGCTCAACCACCTGGCGGAGA...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGGGACAATATGGCGCATaGTCTAAACAACGCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKPALGVQKAAGNPAVNWGQYGA*SKQRSR Trigger: TCTTGAGCGTTGTTTAGATCATGCGCCATATTGTCC...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGATTCTTGGTCAAGTGTaGGAGCTCAGCAGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPILGQV*ELSSFF Trigger: GAAGAAACTGCTGAGCTCTCACACTTGACCAAGAAT...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTTGTTTTGTGTATCACTaGCGCACATCCCGAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYDYRCKHGQQRAFSKSACFVYH*RTSRTA Trigger: AGCAGTTCGGGATGTGCGTCAGTGATACACAAAACA...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | AACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAGCCATTGATCCAAAGTGCTaGAGGATTTGGCTTCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NQHWVCKRQRAIRLSTGAIDPKC*RIWLRN Trigger: ATTTCGAAGCCAAATCCTTCAGCACTTTGGATCAAT...GGCTCCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGTTCTCTCTCAGGCATTaGTCCAAAGTGCTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LKPALGVQKAAGNPAVNWFSLRH*SKVLKD Trigger: ATCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAA...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCAATTCTGAAACCAGCTaGAGGCTTGCGAGTACACCG | + |
|
Preference number: 4 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPNSETS*RLASTP Trigger: CGGTGTACTCGCAAGCCTGCAGCTGGTTTCAGAATT...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGTGCTTGGTTCCAGTTTaGATACTCCTTCGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPCLVPV*ILLRIM Trigger: CATGATCCGAAGGAGTATCCAAACTGGAACCAAGCA...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATATCGAGGGCTAAGCACTaGAGAAAGAGCTGTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARDSASLPAGYWDACIYISRAKH*RKSCKA Trigger: TGCCTTACAGCTCTTTCTTCAGTGCTTAGCCCTCGA...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACAATTCTGAAACCAGCTaGAGGCTTGCGAGTACACCG | + |
|
Preference number: 4 (lower is better) Translates to: ESYSKLLHLPQILDRFIHNSETS*RLASTP Trigger: CGGTGTACTCGCAAGCCTGCAGCTGGTTTCAGAATT...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTACATACACTTCTCCGCCAGGTaGTTGAGCACGACGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSKLLHLPQILDRFIHYIHFSAR*LSTTLV Trigger: AACCAGCGTCGTGCTCAACCACCTGGCGGAGAAGTG...TATGTAGTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTACATACTGGGCTCGAACACATaGAGTGGGCAAGGCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YSKLLHLPQILDRFIHYILGSNT*SGQGTV Trigger: CACTGTGCCTTGCCCACTCCATGTGTTCGAGCCCAG...TATGTAGTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACACCATGCAGGTCCATTaGGTGTTGCCTGGAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESYSKLLHLPQILDRFIHTMQVH*VLPGGF Trigger: AAAACCTCCAGGCAACACCCAATGGACCTGCATGGT...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGGTCGCCATAAGCTATTaGAAACATACAGTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPVAISY*KHTVFT Trigger: AGTGAAGACTGTATGTTTTCAATAGCTTATGGCGAC...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTGTCAGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCCTGGGAGATTCGCTTTaGTTTTTGAGCTTACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCVRFAVVPGDWLEIQHPLGDSL*FLSLLL Trigger: GAGGAGTAAGCTCAAAAAGCAAAGCGAATCTCCCAG...GGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCTGACACATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATAACGCACATCCCGAACTaGTTGGTTCCAGTTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: ARDSASLPAGYWDACIYITHIPN*LVPVWI Trigger: TATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGT...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATAAGGTCCATTGGGTGTTaGCTGGAGGTTTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARDSASLPAGYWDACIYIRSIGC*LEVFFS Trigger: AGAGAAGAAAACCTCCAGGCAACACCCAATGGACCT...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCATGGGGGAATAAATCTGAGGCAAAGTCAACCTGCGAAAACTCCTATGTCCTTTGACAGGCTCTaGGGCATCCTCCACTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKHGGINLRQSQPAKTPMSFDRL*GILHSF Trigger: GAACGAGTGGAGGATGCCCCAGAGCCTGTCAAAGGA...CATAGGAGTTTTCGCAGGTTGACTTTGCCTCAGATTTATTCCCCCATGCTTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTACATAAACTCCTCCAGCAGCTaGGTGACACAGTACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSKLLHLPQILDRFIHYINSSSS*VTQYLL Trigger: CAGGAGGTACTGTGTCACCCAGCTGCTGGAGGAGTT...TATGTAGTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAGTGCAAACGAATATTaGGACATTCTTGGTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LKPALGVQKAAGNPAVNWSANEY*DILGQV Trigger: CACTTGACCAAGAATGTCCCAATATTCGTTTGCACT...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTGGCTGCTCCATTACTaGTGGAAAACCAAGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESYSKLLHLPQILDRFIHWLLHY*WKTKRF Trigger: AAACCTCTTGGTTTTCCATCAGTAATGGAGCAGCCA...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATAATTCTTGGTCAAGTGTaGGAGCTCAGCAGTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARDSASLPAGYWDACIYIILGQV*ELSSFF Trigger: GAAGAAACTGCTGAGCTCTCACACTTGACCAAGAAT...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACATGGCTTGTGCTGACTaGGCGCGGCTTAAGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHMACAD*ARLKLP Trigger: AGGAAGCTTAAGCCGCGCCCAGTCAGCACAAGCCAT...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTCTGGGCTCGAACACATaGAGTGGGCAAGGCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFAPRPESKQNEPYKLSPLGSNT*SGQGTV Trigger: CACTGTGCCTTGCCCACTCCATGTGTTCGAGCCCAG...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTGGCTTAAGCTTCCTTTaGCAGGCTCTGGGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFAPRPESKQNEPYKLSPGLSFL*QALGHP Trigger: AGGATGCCCCAGAGCCTGTCAAAGGAAGCTTAAGCC...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTAACCAGCTGCAGGCTTaGGAGTACACCGAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TFAPRPESKQNEPYKLSPNQLQA*EYTESW Trigger: CCATGACTCGGTGTACTCGCAAGCCTGCAGCTGGTT...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACGTCACACATCCACGGAGTTCTTAGTTAGGTCCATTGGGTGTTaGCTGGAGGTTTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTRHTSTEFLVRSIGC*LEVFFS Trigger: AGAGAAGAAAACCTCCAGGCAACACCCAATGGACCT...AACTAAGAACTCCGTGGATGTGTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTCAGCCACCAACACCATaGAGGTCCATTGGGTGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFAPRPESKQNEPYKLSPQPPTP*RSIGCC Trigger: GCAACACCCAATGGACCTGCATGGTGTTGGTGGCTG...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACAGACCTCGGGCCAGTTaGGAAGCTGAAAGAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHRPRAS*EAEREL Trigger: CAGTTCTCTTTCAGCTTCCCAACTGGCCCGAGGTCT...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACATATTGGGACATTCTTaGTCAAGTGTGAGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESYSKLLHLPQILDRFIHILGHS*SSVRAQ Trigger: CTGAGCTCTCACACTTGACCAAGAATGTCCCAATAT...GTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTAGGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACTCGAGGGCTAAGCACTaGAGAAAGAGCTGTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHSRAKH*RKSCKA Trigger: TGCCTTACAGCTCTTTCTTCAGTGCTTAGCCCTCGA...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCATGGGGGAATAAATCTGAGGCAAAGTCAACCTGCGAAAACTCCTATGTGTTTTGTGTATCACTaGCGCACATCCCGAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKHGGINLRQSQPAKTPMCFVYH*RTSRTA Trigger: AGCAGTTCGGGATGTGCGTCAGTGATACACAAAACA...CATAGGAGTTTTCGCAGGTTGACTTTGCCTCAGATTTATTCCCCCATGCTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | ACACACACACACACACACACACACACACGTCACACATCCACGGAGTTCTTAGTTTTCTCTCTCAGGCATTaGTCCAAAGTGCTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTRHTSTEFLVFSLRH*SKVLKD Trigger: ATCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAA...AACTAAGAACTCCGTGGATGTGTGACGTGTGTGTGTGTGTGTGTGTGTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATAAGTGCAAACGAATATTaGGACATTCTTGGTCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARDSASLPAGYWDACIYISANEY*DILGQV Trigger: CACTTGACCAAGAATGTCCCAATATTCGTTTGCACT...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCATGGGGGAATAAATCTGAGGCAAAGTCAACCTGCGAAAACTCCTATGTGGCTGCTCCATTACTaGTGGAAAACCAAGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKHGGINLRQSQPAKTPMWLLHY*WKTKRF Trigger: AAACCTCTTGGTTTTCCATCAGTAATGGAGCAGCCA...CATAGGAGTTTTCGCAGGTTGACTTTGCCTCAGATTTATTCCCCCATGCTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCATGGGGGAATAAATCTGAGGCAAAGTCAACCTGCGAAAACTCCTATGGGACAATATGGCGCATaGTCTAAACAACGCTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EKHGGINLRQSQPAKTPMGQYGA*SKQRSR Trigger: TCTTGAGCGTTGTTTAGATCATGCGCCATATTGTCC...CATAGGAGTTTTCGCAGGTTGACTTTGCCTCAGATTTATTCCCCCATGCTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | TACAGTAAGCTTCTCCACCTCCCCCAGATCCTCGACCGATTTATACACTACATAATATTGGGACATTCTTaGTCAAGTGTGAGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSKLLHLPQILDRFIHYIILGHS*SSVRAQ Trigger: CTGAGCTCTCACACTTGACCAAGAATGTCCCAATAT...TATGTAGTGTATAAATCGGTCGAGGATCTGGGGGAGGTGGAGAAGCTTACTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR GCA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTCTGGGAGATTCGCTTTaGTTTTTGAGCTTACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TFAPRPESKQNEPYKLSPLGDSL*FLSLLL Trigger: GAGGAGTAAGCTCAAAAAGCAAAGCGAATCTCCCAG...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCATGGGGGAATAAATCTGAGGCAAAGTCAACCTGCGAAAACTCCTATGACATACAGTCTTCACTaGGAGATTCGCTTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKHGGINLRQSQPAKTPMTYSLH*EIRFAF Trigger: AAAAGCAAAGCGAATCTCCCAGTGAAGACTGTATGT...CATAGGAGTTTTCGCAGGTTGACTTTGCCTCAGATTTATTCCCCCATGCTTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CCA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTTGCTTGGTTCCAGTTTaGATACTCCTTCGGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: TFAPRPESKQNEPYKLSPCLVPV*ILLRIM Trigger: CATGATCCGAAGGAGTATCCAAACTGGAACCAAGCA...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CCA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACACATACAGTCTTCACTaGGAGATTCGCTTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHTYSLH*EIRFAF Trigger: AAAAGCAAAGCGAATCTCCCAGTGAAGACTGTATGT...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR TCA 90 bp | AACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCATTGATCCAAAGTGCTaGAGGATTTGGCTTCGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NICTKTRVKTKRTLQAESIDPKC*RIWLRN Trigger: ATTTCGAAGCCAAATCCTTCAGCACTTTGGATCAAT...GGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 90 bp | GGGACGCCCTCGCCACGGCCGGAGAAGACATGGCCCGCACAGGGCTaGTCTGCCGCCGCCGCCCGCCGCCACGGTCCGGGAACCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTPSPRPEKTWPAQG*SAAAARRHGPGTSG Trigger: CCCGGAGGTTCCCGGACCGTGGCGGCGGGCGGCGGCGGCAGAGCAGCCCTGTGCGGGCCATGTCTTCTCCGGCCGTGGCGAGGGCGTCCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065297.6 |
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| CDS CCA 90 bp | CCGCGGCGCAGCGCAGCCGCGAACGCCTCCAGCGCTCCCTTCAGGTaGCCGCCCAGCGCCAGCAGCTCTCCGCGGCGGAGCAGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRRSAAANASSAPFR*PPSASSSPRRSRSS Trigger: GGAGCTTCTGCTCCGCCGCGGAGAGCTGCTGGCGCTGGGCGGCCACCTGAAGGGAGCGCTGGAGGCGTTCGCGGCTGCGCTGCGCCGCGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | CCGCGGGTGCCGCGCTCCAGCGCAGCCCGTGGCGGAGCCGGTAGCTaGACACCAGGCAGTCCACTAGCGACCCGAGGCGCTCGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PRVPRSSAARGGAGS*TPGSPLATRGARAW Trigger: CCAGGCCCGAGCGCCTCGGGTCGCTAGTGGACTGCCTGGTGTTCAGCTACCGGCTCCGCCACGGGCTGCGCTGGAGCGCGGCACCCGCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CCA 90 bp | GCCCGCGCGCGCTCGCGCTGGCCCGGGAACCACTTCTCCGCCAGGTaGTTGAGCACGACGCTGGTTCGGAAGTCGGCGATGGCGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARARSRWPGNHFSAR*LSTTLVRKSAMAAA Trigger: GGCCGCCGCCATCGCCGACTTCCGAACCAGCGTCGTGCTCAACCACCTGGCGGAGAAGTGGTTCCCGGGCCAGCGCGAGCGCGCGCGGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | GCGCGCGCTCGCGCTGGCCCGGGAACCACTTCTCCGCCAGGTGGTTaGGCACGACGCTGGTTCGGAAGTCGGCGATGGCGGCGGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARARAGPGTTSPPGG*ARRWFGSRRWRRPG Trigger: CCCTGGCCGCCGCCATCGCCGACTTCCGAACCAGCGTCGTGCTCAACCACCTGGCGGAGAAGTGGTTCCCGGGCCAGCGCGAGCGCGCGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 90 bp | CATGGACAGTACGGAGAGCTGATATCTCGGGTCGACAGGGAGGACTaGCAGCAGCCACCAACACCATGCAGGTCCATTGGGTGTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HGQYGELISRVDRED*QQPPTPCRSIGCCL Trigger: CAGGCAACACCCAATGGACCTGCATGGTGTTGGTGGCTGCTGGCAGTCCTCCCTGTCGACCCGAGATATCAGCTCTCCGTACTGTCCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAGCCAAACCAGCTGCAGGCTaGCGAGTACACCGAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: NQHWVCKRQRAIRLSTGAKPAAG*RVHRVM Trigger: CATGACTCGGTGTACTCGCAAGCCTGCAGCTGGTTT...GGCTCCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGCGGCTTAAGCTTCCTTaGACAGGCTCTGGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPRLKLP*TGSGAS Trigger: GGATGCCCCAGAGCCTGTCAAAGGAAGCTTAAGCCG...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | AGGCATCGCCTAGAAAGCCGGCATCCTGGAGGACCTTCCCTTTCCTaGAGTAGACCTCGGGCCAGTTGGGAAGCTGAAAGAGAACTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RHRLESRHPGGPSLS*SRPRASWEAERELR Trigger: ACGCAGTTCTCTTTCAGCTTCCCAACTGGCCCGAGGTCTACTTCAGGAAAGGGAAGGTCCTCCAGGATGCCGGCTTTCTAGGCGATGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 90 bp | ATATCTCGGGTCGACAGGGAGGACTGCCAGCAGCCACCAACACCATaGAGGTCCATTGGGTGTTGCCTGGAGGTTTTCTTCTCTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISRVDREDCQQPPTP*RSIGCCLEVFFSLR Trigger: CCTGAGAGAGAAGAAAACCTCCAGGCAACACCCAATGGACCTGCATGGTGTTGGTGGCTGCTGGCAGTCCTCCCTGTCGACCCGAGATAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATATTCTCCGCCAGGTGGTaGAGCACGACGCTGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARDSASLPAGYWDACIYIFSARW*STTLVR Trigger: CCGAACCAGCGTCGTGCTCAACCACCTGGCGGAGAA...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | TTCGTCAACCGTTCCTCCAAAGACTTCATGGACAGTACGGAGAGCTaGTATCTCGGGTCGACAGGGAGGACTGCCAGCAGCCACCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: FVNRSSKDFMDSTES*YLGSTGRTASSHQH Trigger: GTGTTGGTGGCTGCTGGCAGTCCTCCCTGTCGACCCGAGATATCAGCTCTCCGTACTGTCCATGAAGTCTTTGGAGGAACGGTTGACGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTAGAGACAGCTTTCGTTaGAGCAGGACCCCCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SYDYRCKHGQQRAFSKSARDSFR*SRTPFP Trigger: GGGAAAGGGGGTCCTGCTCAAACGAAAGCTGTCTCT...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAGCCCTTCTCTCTCAGGCATaGATCCAAAGTGCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: NQHWVCKRQRAIRLSTGALLSQA*IQSAEG Trigger: TCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAAG...GGCTCCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | ACTTGTAGCTTTGCGGGCGCGAAGTCTTCATCGAGGGCTAAGCACTaGAGAAAGAGCTGTAAGGCATCGCCTAGAAAGCCGGCATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCSFAGAKSSSRAKH*RKSCKASPRKPASW Trigger: CCAGGATGCCGGCTTTCTAGGCGATGCCTTACAGCTCTTTCTTCAGTGCTTAGCCCTCGATGAAGACTTCGCGCCCGCAAAGCTACAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAGCCACTGGGAGATTCGCTTaGCTTTTTGAGCTTACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NQHWVCKRQRAIRLSTGATGRFA*LFELTP Trigger: AGGAGTAAGCTCAAAAAGCAAAGCGAATCTCCCAGT...GGCTCCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | ACATCCCGAACTGCTTGGTTCCAGTTTGGATACTCCTTCGGATCATaGGCCTGTATCTGGGCTCGAACACATGGAGTGGGCAAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TSRTAWFQFGYSFGS*ACIWARTHGVGKAQ Trigger: CTGTGCCTTGCCCACTCCATGTGTTCGAGCCCAGATACAGGCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGGATTCGCTTTGCTTTTaGAGCTTACTCCTCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPDSLCF*SLLLPS Trigger: AGACGGGAGGAGTAAGCTCAAAAAGCAAAGCGAATC...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGCTGCTTGGTTCCAGTTaGGATACTCCTTCGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPLLGSS*DTPSDH Trigger: ATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAG...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGCTTCTCTCTCAGGCATaGATCCAAAGTGCTGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LKPALGVQKAAGNPAVNWLLSQA*IQSAEG Trigger: TCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAAG...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 90 bp | CGTTCTTCAGGCTGCTTCAGGCCAAGCTCAGCAGGGGAGTGTGGCTaGTCCATTACTGATGGAAAACCAAGAGGTTTGCTCTTAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSSGCFRPSSAGECG*SITDGKPRGLLLMH Trigger: GTGCATTAAGAGCAAACCTCTTGGTTTTCCATCAGTAATGGAGCAGCCACACTCCCCTGCTGAGCTTGGCCTGAAGCAGCCTGAAGAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 90 bp | GAAGGATTTGGCTTCGAAATCTGTCCCTTAAATTCTGAAACCAGCTaGAGGCTTGCGAGTACACCGAGTCATGGAGCTCTCGCAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGFGFEICPLNSETS*RLASTPSHGALAGS Trigger: GGAGCCTGCGAGAGCTCCATGACTCGGTGTACTCGCAAGCCTGCAGCTGGTTTCAGAATTTAAGGGACAGATTTCGAAGCCAAATCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACTTCTCCGCCAGGTGGTaGAGCACGACGCTGGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHFSARW*STTLVR Trigger: CCGAACCAGCGTCGTGCTCAACCACCTGGCGGAGAA...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGAAAGTGCTGAAGGATTaGGCTTCGAAATCTGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKPALGVQKAAGNPAVNWKVLKD*ASKSVP Trigger: AGGGACAGATTTCGAAGCCAAATCCTTCAGCACTTT...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | TCCTATGACTACCGCTGTAAACATGGGCAGCAGAGGGCCTTCAGCAAGTCCGCTACTGGGAGATTCGCTTaGCTTTTTGAGCTTACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SYDYRCKHGQQRAFSKSATGRFA*LFELTP Trigger: AGGAGTAAGCTCAAAAAGCAAAGCGAATCTCCCAGT...AGCGGACTTGCTGAAGGCCCTCTGCTGCCCATGTTTACAGCGGTAGTCATAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGTCTTTTAAGCTTTCTTaGCAGAGGGGACAATATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPSFKLS*QRGQYG Trigger: GCCATATTGTCCCCTCTGCAAAGAAAGCTTAAAAGA...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CCA 90 bp | TCAGAATATGCTGTATCTTCGTCAACCGTTCCTCCAAAGACTTCATaGACAGTACGGAGAGCTGATATCTCGGGTCGACAGGGAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: SEYAVSSSTVPPKTS*TVRRADISGRQGGL Trigger: CAGTCCTCCCTGTCGACCCGAGATATCAGCTCTCCGTACTGTCCATGAAGTCTTTGGAGGAACGGTTGACGAAGATACAGCATATTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACCGGCTTAAGCTTCCTTaGACAGGCTCTGGGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHRLKLP*TGSGAS Trigger: GGATGCCCCAGAGCCTGTCAAAGGAAGCTTAAGCCG...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | CTTAAACCAGCACTGGGTGTGCAAAAGGCAGCGGGCAATCCGGCTGTCAACTGGTGTCGCCATAAGCTATaGAAAACATACAGTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKPALGVQKAAGNPAVNWCRHKL*KTYSLH Trigger: GTGAAGACTGTATGTTTTCAATAGCTTATGGCGACA...CCAGTTGACAGCCGGATTGCCCGCTGCCTTTTGCACACCCAGTGCTGGTTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATACTGCTTGGTTCCAGTTaGGATACTCCTTCGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ARDSASLPAGYWDACIYILLGSS*DTPSDH Trigger: ATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAG...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AGGTTTGCAGTTGTTCCTGGAGACTGGCTCGAGATTCAGCATCCCTGCCTGCCGATCTGCAAAACTGTTTaGTGTATCACTGACGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RFAVVPGDWLEIQHPCLPICKTV*CITDAH Trigger: ATGTGCGTCAGTGATACACAAAACAGTTTTGCAGAT...CGGCAGGCAGGGATGCTGAATCTCGAGCCAGTCTCCAGGAACAACTGCAAACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CCA 90 bp | TTTTGTGTATCACTGACGCACATCCCGAACTGCTTGGTTCCAGTTTaGATACTCCTTCGGATCATGAGCCTGTATCTGGGCTCGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: FCVSLTHIPNCLVPV*ILLRIMSLYLGSNT Trigger: TGTGTTCGAGCCCAGATACAGGCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGATACACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | TGCAAGTTCTTAGTGGTCTGGGACCTAGTTGAAGGTATTCATTTGCAGATCCACAAACCAGCTGCAGGCTaGCGAGTACACCGAGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: CKFLVVWDLVEGIHLQIHKPAAG*RVHRVM Trigger: CATGACTCGGTGTACTCGCAAGCCTGCAGCTGGTTT...GTGGATCTGCAAATGAATACCTTCAACTAGGTCCCAGACCACTAAGAACTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CCA 90 bp | GACAGCTCATCTGGCAGGTATTTCACTATTAACTCCTCCAGCAGCTaGGTGACACAGTACCTCCTGTCTGCTAGATACTCTTTTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSSSGRYFTINSSSS*VTQYLLSARYSFKL Trigger: AAGCTTAAAAGAGTATCTAGCAGACAGGAGGTACTGTGTCACCCAGCTGCTGGAGGAGTTAATAGTGAAATACCTGCCAGATGAGCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | GCTCGAGATTCAGCATCCCTGCCTGCCGGCTACTGGGATGCATGTATTTACATATGTCGCCATAAGCTATaGAAAACATACAGTCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARDSASLPAGYWDACIYICRHKL*KTYSLH Trigger: GTGAAGACTGTATGTTTTCAATAGCTTATGGCGACA...TATGTAAATACATGCATCCCAGTAGCCGGCAGGCAGGGATGCTGAATCTCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCCAGGTCCATTGGGTGTaGCCTGGAGGTTTTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NICTKTRVKTKRTLQAESQVHWV*PGGFLL Trigger: GAGAAGAAAACCTCCAGGCAACACCCAATGGACCTG...GGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | GCTCATCTGGCAGGTATTTCACTATTAACTCCTCCAGCAGCTGGGTaGCACAGTACCTCCTGTCTGCTAGATACTCTTTTAAGCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AHLAGISLLTPPAAG*HSTSCLLDTLLSFL Trigger: AAGAAAGCTTAAAAGAGTATCTAGCAGACAGGAGGTACTGTGTCACCCAGCTGCTGGAGGAGTTAATAGTGAAATACCTGCCAGATGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | TGTCTGCAGTGCAATATCCATCTTTCATTCCTCTTTTTAGAACTCTaGACCGCTTCCCTCCAACTGTGTCAACAACAGACCTTCCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLQCNIHLSFLFLEL*TASLQLCQQQTFRQ Trigger: CTGACGGAAGGTCTGTTGTTGACACAGTTGGAGGGAAGCGGTTCAGAGTTCTAAAAAGAGGAATGAAAGATGGATATTGCACTGCAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | AACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCGATTCGCTTTGCTTTTaGAGCTTACTCCTCCCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NICTKTRVKTKRTLQAESDSLCF*SLLLPS Trigger: AGACGGGAGGAGTAAGCTCAAAAAGCAAAGCGAATC...GGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAGCATGGGGGAATAAATCTGAGGCAAAGTCAACCTGCGAAAACTCCTATGTCTTTTAAGCTTTCTTaGCAGAGGGGACAATATGGC | + |
|
Preference number: 5 (lower is better) Translates to: EKHGGINLRQSQPAKTPMSFKLS*QRGQYG Trigger: GCCATATTGTCCCCTCTGCAAAGAAAGCTTAAAAGA...CATAGGAGTTTTCGCAGGTTGACTTTGCCTCAGATTTATTCCCCCATGCTTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTAAAGTGCTGAAGGATTaGGCTTCGAAATCTGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: TFAPRPESKQNEPYKLSPKVLKD*ASKSVP Trigger: AGGGACAGATTTCGAAGCCAAATCCTTCAGCACTTT...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS-3UTR CAA 90 bp | ACATTTGCACCAAGACCAGAGTCAAAACAAAACGAACCTTACAAGCTGAGTCCTATCTGCAAAACTGTTTaGTGTATCACTGACGCACAT | + |
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Preference number: 5 (lower is better) Translates to: TFAPRPESKQNEPYKLSPICKTV*CITDAH Trigger: ATGTGCGTCAGTGATACACAAAACAGTTTTGCAGAT...AGGACTCAGCTTGTAAGGTTCGTTTTGTTTTGACTCTGGTCTTGGTGCAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 90 bp | AGATACTCTTTTAAGCTTTCTTTGCAGAGGGGACAATATGGCGCATaGTCTAAACAACGCTCAAGACAATTCTTACAGAATGAGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: RYSFKLSLQRGQYGA*SKQRSRQFLQNECP Trigger: TGGACACTCATTCTGTAAGAATTGTCTTGAGCGTTGTTTAGATCATGCGCCATATTGTCCCCTCTGCAAAGAAAGCTTAAAAGAGTATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | TCGCCACGGCCGGAGAAGACATGGCCCGCACAGGGCTaGTCTGCCGCCGCCGCCCGCCGCCACGGTCCGGGA | + |
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Preference number: 6 (lower is better) Translates to: SPRPEKTWPAQG*SAAAARRHGPG Trigger: TCCCGGACCGTGGCGGCGGGCGGCGGCGGCAGAGCAGCCCTGTGCGGGCCATGTCTTCTCCGGCCGTGGCGA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065297.6 |
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| CDS CCA 72 bp | AGCGCAGCCGCGAACGCCTCCAGCGCTCCCTTCAGGTaGCCGCCCAGCGCCAGCAGCTCTCCGCGGCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SAAANASSAPFR*PPSASSSPRRS Trigger: GCTCCGCCGCGGAGAGCTGCTGGCGCTGGGCGGCCACCTGAAGGGAGCGCTGGAGGCGTTCGCGGCTGCGCT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 90 bp | CGCGCGCGCTCGCGCTGGCCCGGGAACCACTTCTCCGCCAGGTGGTaGAGCACGACGCTGGTTCGGAAGTCGGCGATGGCGGCGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RARSRWPGNHFSARW*STTLVRKSAMAAAR Trigger: CCTGGCCGCCGCCATCGCCGACTTCCGAACCAGCGTCGTGCTCAACCACCTGGCGGAGAAGTGGTTCCCGGGCCAGCGCGAGCGCGCGCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | CCGCGCTCCAGCGCAGCCCGTGGCGGAGCCGGTAGCTaGACACCAGGCAGTCCACTAGCGACCCGAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PRSSAARGGAGS*TPGSPLATRGA Trigger: AGCGCCTCGGGTCGCTAGTGGACTGCCTGGTGTTCAGCTACCGGCTCCGCCACGGGCTGCGCTGGAGCGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | CGCTCTGTAGATTTTGAGAGTCAGGTCGCTGGGCTCTaGTCGCAGGGCGTCGCAGGCGGCGGCCAGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RSVDFESQVAGL*SQGVAGGGQGL Trigger: GAGGCCCTGGCCGCCGCCTGCGACGCCCTGCGAGCAGAGCCCAGCGACCTGACTCTCAAAATCTACAGAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | CCTGCAGGCCGGCGTACGACTCCGCTCTGTAGATTTTaGGAGTCAGGTCGCTGGGCTCTGCTCGCAGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: PAGRRTTPLCRF*ESGRWALLAGR Trigger: ACGCCCTGCGAGCAGAGCCCAGCGACCTGACTCTCAAAATCTACAGAGCGGAGTCGTACGCCGGCCTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | ACAGGCTCTGGGGCATCCTCCACTCGTTCTTCAGGCTaGTTCAGGCCAAGCTCAGCAGGGGAGTGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TGSGASSTRSSG*FRPSSAGECGC Trigger: GCAGCCACACTCCCCTGCTGAGCTTGGCCTGAAGCAGCCTGAAGAACGAGTGGAGGATGCCCCAGAGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CCA 72 bp | GCAGGCACTGCCGCTGCACTGATGGCTTGTGCTGACTaGGCGCGGCTTAAGCTTCCTTTGACAGGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AGTAAALMACAD*ARLKLPLTGSG Trigger: CCCAGAGCCTGTCAAAGGAAGCTTAAGCCGCGCCCAGTCAGCACAAGCCATCAGTGCAGCGGCAGTGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | TTAAACCGTCCTCCCTGGCAGGCACTGCCGCTGCACTaGTGGCTTGTGCTGACTGGGCGCGGCTTAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LNRPPWQALPLH*WLVLTGRGLSF Trigger: GAAGCTTAAGCCGCGCCCAGTCAGCACAAGCCATCAGTGCAGCGGCAGTGCCTGCCAGGGAGGACGGTTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | TACGGAGAGCTGATATCTCGGGTCGACAGGGAGGACTaGCAGCAGCCACCAACACCATGCAGGTCCATTGGG | + |
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Preference number: 6 (lower is better) Translates to: YGELISRVDRED*QQPPTPCRSIG Trigger: CCCAATGGACCTGCATGGTGTTGGTGGCTGCTGGCAGTCCTCCCTGTCGACCCGAGATATCAGCTCTCCGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 90 bp | GCTGCACTGATGGCTTGTGCTGACTGGGCGCGGCTTAAGCTTCCTTaGACAGGCTCTGGGGCATCCTCCACTCGTTCTTCAGGCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AALMACADWARLKLP*TGSGASSTRSSGCF Trigger: GAAGCAGCCTGAAGAACGAGTGGAGGATGCCCCAGAGCCTGTCAAAGGAAGCTTAAGCCGCGCCCAGTCAGCACAAGCCATCAGTGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | TGGCTTGTGCTGACTGGGCGCGGCTTAAGCTTCCTTTaGCAGGCTCTGGGGCATCCTCCACTCGTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: WLVLTGRGLSFL*QALGHPPLVLQ Trigger: CTGAAGAACGAGTGGAGGATGCCCCAGAGCCTGTCAAAGGAAGCTTAAGCCGCGCCCAGTCAGCACAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | GTCGACAGGGAGGACTGCCAGCAGCCACCAACACCATaGAGGTCCATTGGGTGTTGCCTGGAGGTTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VDREDCQQPPTP*RSIGCCLEVFF Trigger: GAAGAAAACCTCCAGGCAACACCCAATGGACCTGCATGGTGTTGGTGGCTGCTGGCAGTCCTCCCTGTCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | CGTTCCTCCAAAGACTTCATGGACAGTACGGAGAGCTaGTATCTCGGGTCGACAGGGAGGACTGCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSSKDFMDSTES*YLGSTGRTASS Trigger: GCTGCTGGCAGTCCTCCCTGTCGACCCGAGATATCAGCTCTCCGTACTGTCCATGAAGTCTTTGGAGGAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | ATGGCTTGTGCTGACTGGGCGCGGCTTAAGCTTCCTTaGACAGGCTCTGGGGCATCCTCCACTCGTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: MACADWARLKLP*TGSGASSTRSS Trigger: TGAAGAACGAGTGGAGGATGCCCCAGAGCCTGTCAAAGGAAGCTTAAGCCGCGCCCAGTCAGCACAAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | AGGACTGCCAGCAGCCACCAACACCATGCAGGTCCATaGGGTGTTGCCTGGAGGTTTTCTTCTCTCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RTASSHQHHAGP*GVAWRFSSLSG Trigger: GCCTGAGAGAGAAGAAAACCTCCAGGCAACACCCAATGGACCTGCATGGTGTTGGTGGCTGCTGGCAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | CTAGAAAGCCGGCATCCTGGAGGACCTTCCCTTTCCTaGAGTAGACCTCGGGCCAGTTGGGAAGCTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LESRHPGGPSLS*SRPRASWEAER Trigger: TCTTTCAGCTTCCCAACTGGCCCGAGGTCTACTTCAGGAAAGGGAAGGTCCTCCAGGATGCCGGCTTTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | TTTGCGGGCGCGAAGTCTTCATCGAGGGCTAAGCACTaGAGAAAGAGCTGTAAGGCATCGCCTAGAAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: FAGAKSSSRAKH*RKSCKASPRKP Trigger: CGGCTTTCTAGGCGATGCCTTACAGCTCTTTCTTCAGTGCTTAGCCCTCGATGAAGACTTCGCGCCCGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | CCAGCAGCCACCAACACCATGCAGGTCCATTGGGTGTaGCCTGGAGGTTTTCTTCTCTCTCAGGCATTGATC | + |
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Preference number: 6 (lower is better) Translates to: PAATNTMQVHWV*PGGFLLSQALI Trigger: GATCAATGCCTGAGAGAGAAGAAAACCTCCAGGCAACACCCAATGGACCTGCATGGTGTTGGTGGCTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | ACTGCTTGGTTCCAGTTTGGATACTCCTTCGGATCATaGGCCTGTATCTGGGCTCGAACACATGGAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TAWFQFGYSFGS*ACIWARTHGVG Trigger: GCCCACTCCATGTGTTCGAGCCCAGATACAGGCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CCA 72 bp | TCACTGACGCACATCCCGAACTGCTTGGTTCCAGTTTaGATACTCCTTCGGATCATGAGCCTGTATCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SLTHIPNCLVPV*ILLRIMSLYLG Trigger: GCCCAGATACAGGCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | GGCTTCGAAATCTGTCCCTTAAATTCTGAAACCAGCTaGAGGCTTGCGAGTACACCGAGTCATGGAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GFEICPLNSETS*RLASTPSHGAL Trigger: GAGAGCTCCATGACTCGGTGTACTCGCAAGCCTGCAGCTGGTTTCAGAATTTAAGGGACAGATTTCGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CCA 72 bp | GCTGTATCTTCGTCAACCGTTCCTCCAAAGACTTCATaGACAGTACGGAGAGCTGATATCTCGGGTCGACAG | + |
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Preference number: 6 (lower is better) Translates to: AVSSSTVPPKTS*TVRRADISGRQ Trigger: CTGTCGACCCGAGATATCAGCTCTCCGTACTGTCCATGAAGTCTTTGGAGGAACGGTTGACGAAGATACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | ATCACTGACGCACATCCCGAACTGCTTGGTTCCAGTTaGGATACTCCTTCGGATCATGAGCCTGTATCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ITDAHPELLGSS*DTPSDHEPVSG Trigger: CCCAGATACAGGCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 90 bp | GTTTTGTGTATCACTGACGCACATCCCGAACTGCTTGGTTCCAGTTaGGATACTCCTTCGGATCATGAGCCTGTATCTGGGCTCGAACAC | + |
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Preference number: 6 (lower is better) Translates to: VLCITDAHPELLGSS*DTPSDHEPVSGLEH Trigger: GTGTTCGAGCCCAGATACAGGCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGATACACAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | CTGTTTTGTGTATCACTGACGCACATCCCGAACTGCTaGGTTCCAGTTTGGATACTCCTTCGGATCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LFCVSLTHIPNC*VPVWILLRIMS Trigger: GCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGATACACAAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 90 bp | CAGGTCCATTGGGTGTTGCCTGGAGGTTTTCTTCTCTCTCAGGCATaGATCCAAAGTGCTGAAGGATTTGGCTTCGAAATCTGTCCCTTA | + |
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Preference number: 6 (lower is better) Translates to: QVHWVLPGGFLLSQA*IQSAEGFGFEICPL Trigger: TAAGGGACAGATTTCGAAGCCAAATCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAAGAAAACCTCCAGGCAACACCCAATGGACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 90 bp | TCTGCAAAACTGTTTTGTGTATCACTGACGCACATCCCGAACTGCTaGGTTCCAGTTTGGATACTCCTTCGGATCATGAGCCTGTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAKLFCVSLTHIPNC*VPVWILLRIMSLYL Trigger: CAGATACAGGCTCATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGATACACAAAACAGTTTTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | GGGTGTTGCCTGGAGGTTTTCTTCTCTCTCAGGCATTaGTCCAAAGTGCTGAAGGATTTGGCTTCGAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: GCCLEVFFSLRH*SKVLKDLASKS Trigger: AGATTTCGAAGCCAAATCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAAGAAAACCTCCAGGCAACACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | ACAGTAAGTCACACAGAATCTTTTCTACTTGTAGCTTaGCGGGCGCGAAGTCTTCATCGAGGGCTAAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: TVSHTESFLLVA*RARSLHRGLST Trigger: AGTGCTTAGCCCTCGATGAAGACTTCGCGCCCGCAAAGCTACAAGTAGAAAAGATTCTGTGTGACTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | TGTGGCTGCTCCATTACTGATGGAAAACCAAGAGGTTaGCTCTTAATGCACGGTAACGAACTCCAGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: CGCSITDGKPRG*LLMHGNELQED Trigger: GTCTTCCTGGAGTTCGTTACCGTGCATTAAGAGCAAACCTCTTGGTTTTCCATCAGTAATGGAGCAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | TGGGTGTTGCCTGGAGGTTTTCTTCTCTCTCAGGCATaGATCCAAAGTGCTGAAGGATTTGGCTTCGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: WVLPGGFLLSQA*IQSAEGFGFEI Trigger: GATTTCGAAGCCAAATCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAAGAAAACCTCCAGGCAACACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 90 bp | TTTCAGGTGACAGTAAGTCACACAGAATCTTTTCTACTTGTAGCTTaGCGGGCGCGAAGTCTTCATCGAGGGCTAAGCACTGAAGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: FQVTVSHTESFLLVA*RARSLHRGLSTEER Trigger: TCTTTCTTCAGTGCTTAGCCCTCGATGAAGACTTCGCGCCCGCAAAGCTACAAGTAGAAAAGATTCTGTGTGACTTACTGTCACCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | GCAGGTATTTCACTATTAACTCCTCCAGCAGCTGGGTaGCACAGTACCTCCTGTCTGCTAGATACTCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: AGISLLTPPAAG*HSTSCLLDTLL Trigger: TAAAAGAGTATCTAGCAGACAGGAGGTACTGTGTCACCCAGCTGCTGGAGGAGTTAATAGTGAAATACCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | AAACTGTTTTGTGTATCACTGACGCACATCCCGAACTaGTTGGTTCCAGTTTGGATACTCCTTCGGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: KLFCVSLTHIPN*LVPVWILLRIM Trigger: CATGATCCGAAGGAGTATCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGATACACAAAACAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | AACATACAGTCTTCACTGGGAGATTCGCTTTGCTTTTaGAGCTTACTCCTCCCGTCTTCGTTAATAAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: NIQSSLGDSLCF*SLLLPSSLIST Trigger: CGTGCTTATTAACGAAGACGGGAGGAGTAAGCTCAAAAAGCAAAGCGAATCTCCCAGTGAAGACTGTATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 90 bp | GCTATTGAAAACATACAGTCTTCACTGGGAGATTCGCTTTGCTTTTaGAGCTTACTCCTCCCGTCTTCGTTAATAAGCACGTCCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AIENIQSSLGDSLCF*SLLLPSSLISTSCS Trigger: AGAACAGGACGTGCTTATTAACGAAGACGGGAGGAGTAAGCTCAAAAAGCAAAGCGAATCTCCCAGTGAAGACTGTATGTTTTCAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | TACAACCATAATCTGCAAAACTGTTTTGTGTATCACTaGCGCACATCCCGAACTGCTTGGTTCCAGTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YNHNLQNCFVYH*RTSRTAWFQFG Trigger: TCCAAACTGGAACCAAGCAGTTCGGGATGTGCGTCAGTGATACACAAAACAGTTTTGCAGATTATGGTTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS CAA 72 bp | CGTCGATTAGTTCTTCTGGGATGTCGCCATAAGCTATaGAAAACATACAGTCTTCACTGGGAGATTCGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RRLVLLGCRHKL*KTYSLHWEIRF Trigger: AAAGCGAATCTCCCAGTGAAGACTGTATGTTTTCAATAGCTTATGGCGACATCCCAGAAGAACTAATCGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | AGGTTTTCTTCTCTCTCAGGCATTGATCCAAAGTGCTaGAGGATTTGGCTTCGAAATCTGTCCCTTAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: RFSSLSGIDPKC*RIWLRNLSLKF Trigger: GAATTTAAGGGACAGATTTCGAAGCCAAATCCTTCAGCACTTTGGATCAATGCCTGAGAGAGAAGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS GCA 72 bp | ATTGAAAACATACAGTCTTCACTGGGAGATTCGCTTTaGTTTTTGAGCTTACTCCTCCCGTCTTCGTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: IENIQSSLGDSL*FLSLLLPSSLI Trigger: TATTAACGAAGACGGGAGGAGTAAGCTCAAAAAGCAAAGCGAATCTCCCAGTGAAGACTGTATGTTTTCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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| CDS TCA 72 bp | TTTAAGCTTTCTTTGCAGAGGGGACAATATGGCGCATaGTCTAAACAACGCTCAAGACAATTCTTACAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FKLSLQRGQYGA*SKQRSRQFLQN Trigger: ATTCTGTAAGAATTGTCTTGAGCGTTGTTTAGATCATGCGCCATATTGTCCCCTCTGCAAAGAAAGCTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065297.6 ENSMUST00000239119.2 |
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