Pregenerated sensors for LONP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047866Ensembl transcript IDs: ENSMUST00000034141.18, ENSMUST00000121673.8, ENSMUST00000122188.10, ENSMUST00000155433.10
Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGCGCGCGCGCGCGAGTGTAAACAAGCCCTaGTTGGCCCTGAACCCTACATCATCTCATCTCAGTTCCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVRARASVNKP*LALNPTSSHLSSPG Trigger: ACCTGGGGAACTGAGATGAGATGATGTAGGGTTCAGGGCCAACCAGGGCTTGTTTACACTCGCGCGCGCGCGCACACACACACACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 90 bp | GCACTCATGAAGTGGAGGGATGACTGGAAAATCATTGAGCACTCATaGAGTGGAGGGATGACTCAGGGTCAAGCCAGCATGGGTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: ALMKWRDDWKIIEHS*SGGMTQGQASMGAH Trigger: ATGGGCACCCATGCTGGCTTGACCCTGAGTCATCCCTCCACTTCATGAGTGCTCAATGATTTTCCAGTCATCCCTCCACTTCATGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 90 bp | ACGTTGAGATTCACTGCGAGAATAAACAAGGACTGTTCTGGCAACTaGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATACAAGGCCGC | + |
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Preference number: 1 (lower is better) Translates to: TLRFTARINKDCSGN*ELCGEPVQNVIQGR Trigger: GCGGCCTTGTATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTTGTTTATTCTCGCAGTGAATCTCAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 90 bp | GGAACTGGTAGTAGTCTGTGTTTTTCAAGTAGTTGGGATCAGGGCTaGTTTGCTGCCTCCTTTCTAAGCCCTCGGTGGGCAAGACAACAG | + |
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Preference number: 1 (lower is better) Translates to: GTGSSLCFSSSWDQG*FAASFLSPRWARQQ Trigger: CTGTTGTCTTGCCCACCGAGGGCTTAGAAAGGAGGCAGCAAATCAGCCCTGATCCCAACTACTTGAAAAACACAGACTACTACCAGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 90 bp | TGTTTCAAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTTGGTaGCGCATACCTTTAATCCCAGCATTGGGATCAGAATCGCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: CFKNGNKTWAGARRW*RIPLIPALGSESLS Trigger: AGACAGCGATTCTGATCCCAATGCTGGGATTAAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTTGAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 90 bp | CCCTTACCACATGACCACCCTAGAAATTACCTTTTTGATAAGTCTTaGGAAAGGTTGGTCATGGTTCACGCCTGTAGTCTAGAGCTTGGT | + |
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Preference number: 1 (lower is better) Translates to: PLPHDHPRNYLFDKS*ERLVMVHACSLELG Trigger: ACCAAGCTCTAGACTACAGGCGTGAACCATGACCAACCTTTCTCAAGACTTATCAAAAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 90 bp | AGCCCTCATAGACATCTTTACAGATCTTTCCTAGGAATTTACCTGTaGATCACCTCACCATCTAAATACCACAAATACCTTCAGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: SPHRHLYRSFLGIYL*ITSPSKYHKYLQHP Trigger: AGGGTGCTGAAGGTATTTGTGGTATTTAGATGGTGAGGTGATTCACAGGTAAATTCCTAGGAAAGATCTGTAAAGATGTCTATGAGGGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 90 bp | CTTGTTGTAAGCCCTTGGGAAAAACTATCGTCACTGGTAATGATTTaGAATTTTTGCTGGAGACACTGCCTTATACACAATTTAACAGCC | + |
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Preference number: 1 (lower is better) Translates to: LVVSPWEKLSSLVMI*NFCWRHCLIHNLTA Trigger: GGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAAAAATTCCAAATCATTACCAGTGACGATAGTTTTTCCCAAGGGCTTACAACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 90 bp | AAAGGAATAGTTCAGCTACAGATTACAACCAGATTTTTACTTGTATaGCTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: KGIVQLQITTRFLLV*LFGKAVCVCVCVCV Trigger: CACACACACACACACACACACACACACAGCTTTTCCAAACAGTCATACAAGTAAAAATCTGGTTGTAATCTGTAGCTGAACTATTCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 90 bp | GACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATaGCTAATTAATGCTGATCACTCTTCCTTTGTAAAGAAAAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: DWTSLIFIPIRTLGI*LINADHSSFVKKSE Trigger: CTCACTTTTCTTTACAAAGGAAGAGTGATCAGCATTAATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CAA 90 bp | GTGTGTGTGTGTGTGCGCGCGCGCGCGAGTGTAAACAAGCCCTGGTaGGCCCTGAACCCTACATCATCTCATCTCAGTTCCCCAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VCVCVRARASVNKPW*ALNPTSSHLSSPGA Trigger: AGCACCTGGGGAACTGAGATGAGATGATGTAGGGTTCAGGGCCAACCAGGGCTTGTTTACACTCGCGCGCGCGCGCACACACACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CCA 90 bp | GGACTGAATGTAGGGCCGAGCACTTGCAAATGCTCTACCCATGAGCATATCCCCAAACAAAACATGGGCTaGCGCCAGGCGTTGGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: GLNVGPSTCKCSTHEHIPKQNMG*RQALVA Trigger: CGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTT...GGGGATATGCTCATGGGTAGAGCATTTGCAAGTGCTCGGCCCTACATTCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CCA 90 bp | GGACTGAATGTAGGGCCGAGCACTTGCAAATGCTCTACCCATGAGCATATCCCCCAACTGGGAGCTTTGTaGGGAGCCAGTCCAGAACGT | + |
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Preference number: 2 (lower is better) Translates to: GLNVGPSTCKCSTHEHIPQLGAL*GASPER Trigger: ACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTG...GGGGATATGCTCATGGGTAGAGCATTTGCAAGTGCTCGGCCCTACATTCAGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CAA 90 bp | ATTCACTGCGAGAATAAACAAGGACTGTTCTGGCAACTGGGAGCTTaGTGGGGAGCCAGTCCAGAACGTAATACAAGGCCGCTGCGGATG | + |
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Preference number: 2 (lower is better) Translates to: IHCENKQGLFWQLGA*WGASPERNTRPLRM Trigger: CATCCGCAGCGGCCTTGTATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTTGTTTATTCTCGCAGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR TCA 90 bp | TGTATGACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCCCAGGTGCTATaGGGACAGATGAGTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: CMTVWKSCVCVCVCVCVCVPQVL*GQMSAT Trigger: TGTGGCACTCATCTGTCCTCATAGCACCTGGGGAAC...ACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGTCATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR TCA 90 bp | AGTGTTGGTTGGTTATATAACCCTTACCACATGACCACCCTAGAAATTACCTTTCATGAAGTGGAGGGATaGCTCAGGGTCAAGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: SVGWLYNPYHMTTLEITFHEVEG*LRVKPA Trigger: TGCTGGCTTGACCCTGAGTCATCCCTCCACTTCATG...AAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTTATATAACCAACCAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR TCA 90 bp | ATACCACAAATACCTTCAGCACCCTATTTTATAAGCTACTTCCATCTGCTGCTTGAGCATGAGCACTCATaGAGTGGAGGGATGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: IPQIPSAPYFISYFHLLLEHEHS*SGGMTG Trigger: TCCAGTCATCCCTCCACTTCATGAGTGCTCATGCTC...AAGCAGCAGATGGAAGTAGCTTATAAAATAGGGTGCTGAAGGTATTTGTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCTTTTTGATAAGTCTTaGGAAAGGTTGGTCATGGTT | + |
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Preference number: 2 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRLFDKS*ERLVMV Trigger: AACCATGACCAACCTTTCTCAAGACTTATCAAAAAG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR TCA 90 bp | ATACCACAAATACCTTCAGCACCCTATTTTATAAGCTACTTCCATCTGCTGCTTAGTTGGGATCAGGGCTaGTTTGCTGCCTCCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: IPQIPSAPYFISYFHLLLSWDQG*FAASFL Trigger: TAGAAAGGAGGCAGCAAATCAGCCCTGATCCCAACT...AAGCAGCAGATGGAAGTAGCTTATAAAATAGGGTGCTGAAGGTATTTGTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACCTTTCTGGTCTTTGGTaGCGTAGGAAAGGGAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LLETLPYTQFNSPHRHLYLSGLW*RRKGKS Trigger: GCTTTTCCCTTTCCTACGTCACCAAAGACCAGAAAG...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACAAGTGGAGGGATGACTaGAAAATCATTGAGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: LLETLPYTQFNSPHRHLYKWRDD*KIIEHS Trigger: TGAGTGCTCAATGATTTTCCAGTCATCCCTCCACTT...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CAA 90 bp | CCTTGTTGTAAGCCCTTGGGAAAAACTATCGTCACTGGTAATGATTaGGAATTTTTGCTGGAGACACTGCCTTATACACAATTTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: PCCKPLGKTIVTGND*EFLLETLPYTQFNS Trigger: GCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAAAAATTCCAAATCATTACCAGTGACGATAGTTTTTCCCAAGGGCTTACAACAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR GCA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATCACGTTGAGATTCACTaGGAGAATAAACAAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: RLDISHFHSHKDFRNMTNHVEIH*ENKQGL Trigger: CAGTCCTTGTTTATTCTCGCAGTGAATCTCAACGTG...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR TCA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATCTAGGAATTTACCTGTaGATCACCTCACCATCTAAA | + |
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Preference number: 2 (lower is better) Translates to: RLDISHFHSHKDFRNMTNLGIYL*ITSPSK Trigger: TTTAGATGGTGAGGTGATTCACAGGTAAATTCCTAG...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR GCA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATTTTTGCTGGAGACACTaGCTTATACACAATTTAACA | + |
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Preference number: 2 (lower is better) Translates to: RLDISHFHSHKDFRNMTNFCWRH*LIHNLT Trigger: TGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAAAA...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 72 bp | CAGGGTCAAGCCAGCATGGGTGCCCATAAGAGGTCATaGCTTGGGTCACTTCCATTCAAGAGCCACACTATC | + |
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Preference number: 3 (lower is better) Translates to: QGQASMGAHKRS*LGSLPFKSHTI Trigger: GATAGTGTGGCTCTTGAATGGAAGTGACCCAAGTCATGACCTCTTATGGGCACCCATGCTGGCTTGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | AATAAACAAGGACTGTTCTGGCAACTGGGAGCTTTGTaGGGAGCCAGTCCAGAACGTAATACAAGGCCGCTG | + |
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Preference number: 3 (lower is better) Translates to: NKQGLFWQLGAL*GASPERNTRPL Trigger: CAGCGGCCTTGTATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTTGTTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | AATGGAAACAAAACATGGGCTGGCGCCAGGCGTTGGTaGCGCATACCTTTAATCCCAGCATTGGGATCAGAA | + |
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Preference number: 3 (lower is better) Translates to: NGNKTWAGARRW*RIPLIPALGSE Trigger: TTCTGATCCCAATGCTGGGATTAAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CAA 90 bp | GGACTGAATGTAGGGCCGAGCACTTGCAAATGCTCTACCCATGAGCATATCCCCCCTTGTTGTAAGCCCTaGGGAAAAACTATCGTCACT | + |
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Preference number: 3 (lower is better) Translates to: GLNVGPSTCKCSTHEHIPPCCKP*GKTIVT Trigger: AGTGACGATAGTTTTTCCCAAGGGCTTACAACAAGG...GGGGATATGCTCATGGGTAGAGCATTTGCAAGTGCTCGGCCCTACATTCAGTCC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 72 bp | ACTGGAAAATCATTGAGCACTCATGAAGTGGAGGGATaGCTCAGGGTCAAGCCAGCATGGGTGCCCATAAGA | + |
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Preference number: 3 (lower is better) Translates to: TGKSLSTHEVEG*LRVKPAWVPIR Trigger: TCTTATGGGCACCCATGCTGGCTTGACCCTGAGTCATCCCTCCACTTCATGAGTGCTCAATGATTTTCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 72 bp | AGTAGTCTGTGTTTTTCAAGTAGTTGGGATCAGGGCTaGTTTGCTGCCTCCTTTCTAAGCCCTCGGTGGGCA | + |
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Preference number: 3 (lower is better) Translates to: SSLCFSSSWDQG*FAASFLSPRWA Trigger: TGCCCACCGAGGGCTTAGAAAGGAGGCAGCAAATCAGCCCTGATCCCAACTACTTGAAAAACACAGACTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | GTTGAGATTCACTGCGAGAATAAACAAGGACTGTTCTaGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: VEIHCENKQGLF*QLGALWGASPE Trigger: TTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTTGTTTATTCTCGCAGTGAATCTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | AAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTTaGTGGCGCATACCTTTAATCCCAGCATTGGGATCA | + |
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Preference number: 3 (lower is better) Translates to: KNGNKTWAGARR*WRIPLIPALGS Trigger: TGATCCCAATGCTGGGATTAAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR GCA 72 bp | CATCTCAGTTCCCCAGGTGCTATGAGGACAGATGAGTaGCACAATGCTTGGATGAAAAGCAACTCAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: HLSSPGAMRTDE*HNAWMKSNSVS Trigger: AGACACTGAGTTGCTTTTCATCCAAGCATTGTGGCACTCATCTGTCCTCATAGCACCTGGGGAACTGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | TTCACTGCGAGAATAAACAAGGACTGTTCTGGCAACTaGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATA | + |
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Preference number: 3 (lower is better) Translates to: FTARINKDCSGN*ELCGEPVQNVI Trigger: TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTTGTTTATTCTCGCAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 72 bp | GAATGTAGGGCCGAGCACTTGCAAATGCTCTACCCATaGGCATATCCCCAACCCATAAGTTTGATAAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: ECRAEHLQMLYP*AYPQPISLIKS Trigger: GGACTTTATCAAACTTATGGGTTGGGGATATGCTCATGGGTAGAGCATTTGCAAGTGCTCGGCCCTACATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | CCAGGTGCTATGAGGACAGATGAGTGCCACAATGCTTaGATGAAAAGCAACTCAGTGTCTTTAGGGGAATGT | + |
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Preference number: 3 (lower is better) Translates to: PGAMRTDECHNA*MKSNSVSLGEC Trigger: ACATTCCCCTAAAGACACTGAGTTGCTTTTCATCCAAGCATTGTGGCACTCATCTGTCCTCATAGCACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR GCA 72 bp | AACACCTTGGGTTGTATGGTTCACGTTGAGATTCACTaGGAGAATAAACAAGGACTGTTCTGGCAACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: NTLGCMVHVEIH*ENKQGLFWQLG Trigger: TCCCAGTTGCCAGAACAGTCCTTGTTTATTCTCGCAGTGAATCTCAACGTGAACCATACAACCCAAGGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CAA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCAATGATTTGGAATTTTaGCTGGAGACACTGCCTTAT | + |
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Preference number: 3 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRNDLEF*LETLPY Trigger: ATAAGGCAGTGTCTCCAGCAAAAATTCCAAATCATT...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CAA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATGTGGGGTCCTGGATTTaGCCTTTAGTGTCATGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RLDISHFHSHKDFRNMTNVGSWI*PLVSCP Trigger: GGGACATGACACTAAAGGCAAAATCCAGGACCCCAC...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | ATGTCCCTAGGTACATTCATGTTCACAGCAGAAATCTaGTCATTGGTGAGTACCCAAAGCTTAGAAACTCAT | + |
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Preference number: 3 (lower is better) Translates to: MSLGTFMFTAEI*SLVSTQSLETH Trigger: ATGAGTTTCTAAGCTTTGGGTACTCACCAATGACCAGATTTCTGCTGTGAACATGAATGTACCTAGGGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CAA 90 bp | AGTGTTGGTTGGTTATATAACCCTTACCACATGACCACCCTAGAAATTACCTTTGAGATCACCCTGCTTTaGTTCCTGGTAAGCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: SVGWLYNPYHMTTLEITFEITLL*FLVSFC Trigger: ACAAAAGCTTACCAGGAACAAAAGCAGGGTGATCTC...AAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTTATATAACCAACCAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CAA 90 bp | AGTGTTGGTTGGTTATATAACCCTTACCACATGACCACCCTAGAAATTACCTTTCTAAGGCATCAGAGTTaGAGATCACCCTGCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: SVGWLYNPYHMTTLEITFLRHQS*RSPCFC Trigger: ACAAAAGCAGGGTGATCTCAAACTCTGATGCCTTAG...AAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTTATATAACCAACCAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CAA 90 bp | AGTGTTGGTTGGTTATATAACCCTTACCACATGACCACCCTAGAAATTACCTTTATGACTGGAAAATCATaGAGCACTCATGAAGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: SVGWLYNPYHMTTLEITFMTGKS*STHEVE Trigger: CTCCACTTCATGAGTGCTCAATGATTTTCCAGTCAT...AAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTTATATAACCAACCAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR TCA 72 bp | GTTCAGCTACAGATTACAACCAGATTTTTACTTGTATaGCTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: VQLQITTRFLLV*LFGKAVCVCVC Trigger: ACACACACACACACACACAGCTTTTCCAAACAGTCATACAAGTAAAAATCTGGTTGTAATCTGTAGCTGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR GCA 72 bp | TCACTGGTAATGATTTGGAATTTTTGCTGGAGACACTaGCTTATACACAATTTAACAGCCCTCATAGACATC | + |
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Preference number: 3 (lower is better) Translates to: SLVMIWNFCWRH*LIHNLTALIDI Trigger: GATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAAAAATTCCAAATCATTACCAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR CCA 72 bp | ACAGATTACAACCAGATTTTTACTTGTATGACTGTTTaGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: TDYNQIFTCMTV*KSCVCVCVCVC Trigger: ACACACACACACACACACACACACACAGCTTTTCCAAACAGTCATACAAGTAAAAATCTGGTTGTAATCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| 3UTR-3UTR CAA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATTCCAGTTGTGGAGTATaGACTCTGCAGTCTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: RLDISHFHSHKDFRNMTNSSCGV*TLQSDF Trigger: AAAATCAGACTGCAGAGTCAATACTCCACAACTGGA...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| 3UTR TCA 72 bp | AGACATCTTTACAGATCTTTCCTAGGAATTTACCTGTaGATCACCTCACCATCTAAATACCACAAATACCTT | + |
|
Preference number: 3 (lower is better) Translates to: RHLYRSFLGIYL*ITSPSKYHKYL Trigger: AAGGTATTTGTGGTATTTAGATGGTGAGGTGATTCACAGGTAAATTCCTAGGAAAGATCTGTAAAGATGTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | AAGGACTGTTCTGGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATACGGCTCCGCACCAGCTaGAAGTTGCGGGCCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KDCSGNWELCGEPVQNVIRLRTS*KLRAVS Trigger: GGACACGGCCCGCAACTTGCAGCTGGTGCGGAGCCG...TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | GGACTGAATGTAGGGCCGAGCACTTGCAAATGCTCTACCCATGAGCATATCCCCTCAAGTCGGTCCAGCTaGTCCACTTCAGCCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLNVGPSTCKCSTHEHIPSSRSS*STSATG Trigger: TCCCGTGGCTGAAGTGGAGCAGCTGGACCGACTTGA...GGGGATATGCTCATGGGTAGAGCATTTGCAAGTGCTCGGCCCTACATTCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCTCAAGCAGCGCAGCTaGAGGATCCCCCTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRLKQRS*RIPLQA Trigger: AGCCTGCAGGGGGATCCTGCAGCTGCGCTGCTTGAG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCCCGACCCAGAGTCTTaGCCACGGATCTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRPDPES*PRISPH Trigger: GTGTGGGGAGATCCGTGGCCAAGACTCTGGGTCGGG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | AAGGACTGTTCTGGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATACAGAAGAATCCGGGCTaGCCGAATGTCCAGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KDCSGNWELCGEPVQNVIQKNPG*PNVQAI Trigger: GATCGCCTGGACATTCGGGCAGCCCGGATTCTTCTG...TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | AAGGACTGTTCTGGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATATACGACCAGGCATACTaGCCACATAGGTCCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KDCSGNWELCGEPVQNVIYDQAY*PHRSAC Trigger: ACAGGCGGACCTATGTGGGCAGTATGCCTGGTCGTA...TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGGAGTCAGACCGTGCTaGTCCAGCTGCTTAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRGVRPC*SSCLGI Trigger: GATCCCTAAGCAGCTGGAGCAGCACGGTCTGACTCC...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | GGACTGAATGTAGGGCCGAGCACTTGCAAATGCTCTACCCATGAGCATATCCCCGGAGTCGATCAGAATTaGCATTTCAGGTGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLNVGPSTCKCSTHEHIPGVDQN*HFRWQG Trigger: GCCCTGCCACCTGAAATGCCAATTCTGATCGACTCC...GGGGATATGCTCATGGGTAGAGCATTTGCAAGTGCTCGGCCCTACATTCAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCGGGTGTGTTGGGGATaGCTCCTAGAATGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRRVCWG*LLEWCS Trigger: AGAGCACCATTCTAGGAGTCATCCCCAACACACCCG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | CAAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTTGGTGGCGCATACCTTTTCTGTAGAATTGCTCTaGCAGCTCTCCCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKWKQNMGWRQALVAHTFSVELL*QLSQLL Trigger: GAGGAGCTGGGAGAGCTGTCAGAGCAATTCTACAGA...AAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCCAAGTGCAATCCTGTaGAACTCCCGACCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRPSAIL*NSRPRV Trigger: GACTCTGGGTCGGGAGTTCCACAGGATTGCACTTGG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCACCGGCACAGGCCTGTaGTCAGTAAAGTGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRTGTGL*SVKCSV Trigger: CACACTACACTTTACTGATCACAGGCCTGTGCCGGT...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTACCCTGGAACCTaGATGATCTCCATCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRVYPGT*MISILS Trigger: GGACAGGATGGAGATCATTCAGGTTCCAGGGTACAC...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TGTATGACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACCAGCTGCAAGTTaGGGGCCGTGTCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CMTVWKSCVCVCVCVCVCAPAAS*GPCPHL Trigger: CAAGTGTGGACACGGCCCGCAACTTGCAGCTGGTGC...ACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGTCATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | CAAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTTGGTGGCGCATACCTTTCAGAGAACGGACTCCTaGTTCTCTGGTGTATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKWKQNMGWRQALVAHTFQRTDS*FSGVSG Trigger: ACCAGATACACCAGAGAAGCAGGAGTCCGTTCTCTG...AAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACGCAGCGGAAGGCGGCTaGGGATCTGGATGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLETLPYTQFNSPHRHLYAAEGG*GSGWGS Trigger: TGAGCCCCATCCAGATCCCCAGCCGCCTTCCGCTGC...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| 3UTR CAA 72 bp | GAGAATAAACAAGGACTGTTCTGGCAACTGGGAGCTTaGTGGGGAGCCAGTCCAGAACGTAATACAAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ENKQGLFWQLGA*WGASPERNTRP Trigger: CGGCCTTGTATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTTGTTTATTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| 3UTR CAA 72 bp | CAAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTaGGTGGCGCATACCTTTAATCCCAGCATTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QKWKQNMGWRQA*VAHTFNPSIGI Trigger: GATCCCAATGCTGGGATTAAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCGGCTCCGCACCAGCTaGAAGTTGCGGGCCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRLRTS*KLRAVS Trigger: GGACACGGCCCGCAACTTGCAGCTGGTGCGGAGCCG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | GGACTGAATGTAGGGCCGAGCACTTGCAAATGCTCTACCCATGAGCATATCCCCTTCTCTTTTAAGACCTaGACAATCTGGAACCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLNVGPSTCKCSTHEHIPFSFKT*TIWNRH Trigger: GTGCCGGTTCCAGATTGTGCAGGTCTTAAAAGAGAA...GGGGATATGCTCATGGGTAGAGCATTTGCAAGTGCTCGGCCCTACATTCAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCTCCCAGCTCCTCCCTaGTTTTGCAGATATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRLPAPP*FCRYWE Trigger: TTCCCAATATCTGCAAAAGCAGGGAGGAGCTGGGAG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCTGCTTAGGGATCAGGTaGCTGTGGGCAATCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRCLGIR*LWAISI Trigger: GATAGAGATTGCCCACAGGCACCTGATCCCTAAGCA...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCAACGACGTGCCCTTaGGCAAGCGGCTCCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSATTCP*ASGSAP Trigger: TGGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGGGCAGACTCCTTCATaGCGTCCCCAAGCTGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSGQTPS*RPQAGR Trigger: CCGGCCAGCTTGGGGACGTCATGAAGGAGTCTGCCC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAGGCGGCTGGGGATCTaGATGGGGCTCACGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRRLGI*MGLTED Trigger: GTCCTCCGTGAGCCCCATCCAGATCCCCAGCCGCCT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCAGCGGAAGGCGGCTaGGGATCTGGATGGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAAEGG*GSGWGS Trigger: TGAGCCCCATCCAGATCCCCAGCCGCCTTCCGCTGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATGCAACGACGTGCCCTTaGGCAAGCGGCTCCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RLDISHFHSHKDFRNMTNATTCP*ASGSAP Trigger: TGGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGC...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | CAAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTTGGTGGCGCATACCTTTGGTTTGCGAGTCTTCTaGAGTAATTTCAGACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKWKQNMGWRQALVAHTFGLRVF*SNFRPS Trigger: TGAAGGTCTGAAATTACTTCAGAAGACTCGCAAACC...AAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | AAGGACTGTTCTGGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATATGTTGGCAGTTGCTATaGAAAGAACTTGGGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KDCSGNWELCGEPVQNVICWQLL*KELGKG Trigger: ACCTTTCCCAAGTTCTTTTCATAGCAACTGCCAACA...TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTTAGCTCATACTGGCTTTCTGGTCTTTGGTGACGTAGGAAAGGGAAAAGTTTGGGCCAATTACTaGCCACAACCTGAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AALAHTGFLVFGDVGKGKVWANY*PQPELP Trigger: TGGCAGTTCAGGTTGTGGGCAGTAATTGGCCCAAAC...TTTTCCCTTTCCTACGTCACCAAAGACCAGAAAGCCAGTATGAGCTAAAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTCAAGCAGCGCAGCTaGAGGATCCCCCTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLKQRS*RIPLQA Trigger: AGCCTGCAGGGGGATCCTGCAGCTGCGCTGCTTGAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | AATTTGGGTTTCTCCCTTATCCTAATTCCAATTCTAGATCATAGAGTTTGGTTCAGGCGGCTGGGGATCTaGATGGGGCTCACGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NLGFSLILIPILDHRVWFRRLGI*MGLTED Trigger: GTCCTCCGTGAGCCCCATCCAGATCCCCAGCCGCCT...GAACCAAACTCTATGATCTAGAATTGGAATTAGGATAAGGGAGAAACCCAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | CAAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTTGGTGGCGCATACCTTTACGGCATCTAAGATCTaGAGCTTCTCTTTGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKWKQNMGWRQALVAHTFTASKI*SFSLLL Trigger: AAGCAACAAAGAGAAGCTCCAGATCTTAGATGCCGT...AAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCCCGACCCAGAGTCTTaGCCACGGATCTCCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSPDPES*PRISPH Trigger: GTGTGGGGAGATCCGTGGCCAAGACTCTGGGTCGGG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | AAGGACTGTTCTGGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATAGTCTTTTTATCTCCTTaGCACAGACTTTATGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDCSGNWELCGEPVQNVIVFLSP*HRLYEP Trigger: AGGCTCATAAAGTCTGTGTCAAGGAGATAAAAAGAC...TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCACCAGCTGCAAGTTaGGGGCCGTGTCCACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAPAAS*GPCPHL Trigger: CAAGTGTGGACACGGCCCGCAACTTGCAGCTGGTGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACACACACACCCCCAAGTaGAATCCTGTGGAACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLETLPYTQFNSPHRHLYTHTPK*NPVELP Trigger: CGGGAGTTCCACAGGATTGCACTTGGGGGTGTGTGT...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | GCTGCTTTAGCTCATACTGGCTTTCTGGTCTTTGGTGACGTAGGAAAGGGAAAAAGCTTGGCTTCCTTATaGTGGCCTTCTGCAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AALAHTGFLVFGDVGKGKSLASL*WPSATF Trigger: GAAAGTTGCAGAAGGCCAGCATAAGGAAGCCAAGCT...TTTTCCCTTTCCTACGTCACCAAAGACCAGAAAGCCAGTATGAGCTAAAGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTTACTGCCCACAACCTaGACTGCCAGGGCAGCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLLPTT*TARAAV Trigger: AACGGCTGCCCTGGCAGTTCAGGTTGTGGGCAGTAA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCACAAGCCGCCCACTaGAAAGTGAGGCGAGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAQAAH*KVRRDK Trigger: CTTGTCTCGCCTCACTTTTCAGTGGGCGGCTTGTGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAGTCATGGCTACATCTaGGCGCACAAGCCGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSHGYI*AHKPPT Trigger: AGTGGGCGGCTTGTGCGCTCAGATGTAGCCATGACT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCCCACAACCTGAACTaGCAGGGCAGCCGTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAHNLN*QGSRSN Trigger: ATTGGAACGGCTGCCCTGGCAGTTCAGGTTGTGGGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCAAGTCGGTCCAGCTaGTCCACTTCAGCCACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSSRSS*STSATG Trigger: TCCCGTGGCTGAAGTGGAGCAGCTGGACCGACTTGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCAGAAGAATCCGGGCTaGCCGAATGTCCAGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSQKNPG*PNVQAI Trigger: GATCGCCTGGACATTCGGGCAGCCCGGATTCTTCTG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGGAGTCAGACCGTGCTaGTCCAGCTGCTTAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSGVRPC*SSCLGI Trigger: GATCCCTAAGCAGCTGGAGCAGCACGGTCTGACTCC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TGTATGACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCAGCACATGTTCTTTaGAACCTTCTCCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CMTVWKSCVCVCVCVCVCPAHVL*NLLHQP Trigger: TGGCTGATGGAGAAGGTTGCAAAGAACATGTGCTGG...ACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGTCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCGGGTGTGTTGGGGATaGCTCCTAGAATGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRVCWG*LLEWCS Trigger: AGAGCACCATTCTAGGAGTCATCCCCAACACACCCG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCCGTTCCAATTCTGTaGAATGGTGGCAGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAVPIL*NGGRSC Trigger: GCAGGACCTGCCACCATTGCACAGAATTGGAACGGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGTTTCTCCCTTATCCTAATTCCAATTCTAGATCATAGAGTTTGGTTCGCCCACAACCTGAACTaGCAGGGCAGCCGTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLGFSLILIPILDHRVWFAHNLN*QGSRSN Trigger: ATTGGAACGGCTGCCCTGGCAGTTCAGGTTGTGGGC...GAACCAAACTCTATGATCTAGAATTGGAATTAGGATAAGGGAGAAACCCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCCCCACACTTGTTTTaGCTACTCCAGGCGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSPHLF*LLQAGQ Trigger: TTGGCCCGCCTGGAGTAGGCAAAACAAGTGTGGGGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGACACACACCCCCAAGTaGAATCCTGTGGAACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSTHTPK*NPVELP Trigger: CGGGAGTTCCACAGGATTGCACTTGGGGGTGTGTGT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTACGACCAGGCATACTaGCCACATAGGTCCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSYDQAY*PHRSAC Trigger: ACAGGCGGACCTATGTGGGCAGTATGCCTGGTCGTA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACCTTATGCTGGCCTTCTaGAACTTTCACTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLETLPYTQFNSPHRHLYLMLAF*NFHCHS Trigger: GCTGTGGCAGTGAAAGTTGCAGAAGGCCAGCATAAG...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCCAAGTGCAATCCTGTaGAACTCCCGACCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSPSAIL*NSRPRV Trigger: GACTCTGGGTCGGGAGTTCCACAGGATTGCACTTGG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | ATACCACAAATACCTTCAGCACCCTATTTTATAAGCTACTTCCATCTGCTGCTTCCTCGAATGTCAGACTaGTCACACACACCCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPQIPSAPYFISYFHLLLPRMSD*SHTPPS Trigger: ACTTGGGGGTGTGTGTGACCAGTCTGACATTCGAGG...AAGCAGCAGATGGAAGTAGCTTATAAAATAGGGTGCTGAAGGTATTTGTGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGTTGGTTATATAACCCTTACCACATGACCACCCTAGAAATTACCTTTCAGCTCATACAGTGGTaGCCCCAGGATGTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGWLYNPYHMTTLEITFQLIQW*PQDVFQ Trigger: CTGAAAGACATCCTGGGGCCACCACTGTATGAGCTG...AAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTTATATAACCAACCAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGACCGGCACAGGCCTGTaGTCAGTAAAGTGTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSTGTGL*SVKCSV Trigger: CACACTACACTTTACTGATCACAGGCCTGTGCCGGT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCTGTAGAATTGCTCTaGCAGCTCTCCCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSVELL*QLSQLL Trigger: GAGGAGCTGGGAGAGCTGTCAGAGCAATTCTACAGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGTGTACCCTGGAACCTaGATGATCTCCATCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSVYPGT*MISILS Trigger: GGACAGGATGGAGATCATTCAGGTTCCAGGGTACAC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGACCAGGTCTGGTCTTaGCAGGAAAGCCACCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSDQVWS*QESHHQ Trigger: TTGATGGTGGCTTTCCTGTCAAGACCAGACCTGGTC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATTCCCCACACTTGTTTTaGCTACTCCAGGCGGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLDISHFHSHKDFRNMTNSPHLF*LLQAGQ Trigger: TTGGCCCGCCTGGAGTAGGCAAAACAAGTGTGGGGA...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGGCAGGGCCAAGTCTaGAGTGTCACTGATGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSWQGQV*SVTDGF Trigger: GAATCCATCAGTGACACTGCAGACTTGGCCCTGCCA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCTCCAGCTGGGAAGTaGAGATGGATGTCTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAPAGK*RWMSVL Trigger: CAACACAGACATCCATCTGCACTTCCCAGCTGGAGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAATTCTGTGCAATGGTaGCAGGTCCTGCGTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSNSVQW*QVLRVA Trigger: AGCGACACGCAGGACCTGCCACCATTGCACAGAATT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCCTCGAATGTCAGACTaGTCACACACACCCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSPRMSD*SHTPPS Trigger: ACTTGGGGGTGTGTGTGACCAGTCTGACATTCGAGG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGGAGTCGATCAGAATTaGCATTTCAGGTGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSGVDQN*HFRWQG Trigger: GCCCTGCCACCTGAAATGCCAATTCTGATCGACTCC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCAGCTCATACAGTGGTaGCCCCAGGATGTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSQLIQW*PQDVFQ Trigger: CTGAAAGACATCCTGGGGCCACCACTGTATGAGCTG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTCCAGCTCATACAGTaGTGGCCCCAGGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLQLIQ*WPQDVF Trigger: AAAGACATCCTGGGGCCACCACTGTATGAGCTGGAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCAGCTAATGGCGAGATaGGCAGACTCCTTCATGACG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSQLMAR*ADSFMT Trigger: CGTCATGAAGGAGTCTGCCCATCTCGCCATTAGCTG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGTGACAGCTCCAGCTaGGAAGTGCAGATGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCDSSS*EVQMDV Trigger: GACATCCATCTGCACTTCCCAGCTGGAGCTGTCACA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| 3UTR CAA 72 bp | GTTTGGGGAGTCTTTCTTCTCCCTTGTTGTAAGCCCTaGGGAAAAACTATCGTCACTGGTAATGATTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VWGVFLLPCCKP*GKTIVTGNDLE Trigger: TTCCAAATCATTACCAGTGACGATAGTTTTTCCCAAGGGCTTACAACAAGGGAGAAGAAAGACTCCCCAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCCTCTGCGGAATTATaGTCTGCTTCAGTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSSAEL*SASVLL Trigger: GAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGTTTGGGCCAATTACTaGCCACAACCTGAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSVWANY*PQPELP Trigger: TGGCAGTTCAGGTTGTGGGCAGTAATTGGCCCAAAC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTCCCAGCTCCTCCCTaGTTTTGCAGATATTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLPAPP*FCRYWE Trigger: TTCCCAATATCTGCAAAAGCAGGGAGGAGCTGGGAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGCTTAGGGATCAGGTaGCTGTGGGCAATCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCLGIR*LWAISI Trigger: GATAGAGATTGCCCACAGGCACCTGATCCCTAAGCA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCAGAGAACGGACTCCTaGTTCTCTGGTGTATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSQRTDS*FSGVSG Trigger: ACCAGATACACCAGAGAAGCAGGAGTCCGTTCTCTG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | AGTGTTGGTTGGTTATATAACCCTTACCACATGACCACCCTAGAAATTACCTTTTTCTGCAACTTTCACTaGCACAGCACGGCAAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGWLYNPYHMTTLEITFFCNFH*HSTANS Trigger: GCTATTTGCCGTGCTGTGGCAGTGAAAGTTGCAGAA...AAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTTATATAACCAACCAACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTTATGCTGGCCTTCTaGAACTTTCACTGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLMLAF*NFHCHS Trigger: GCTGTGGCAGTGAAAGTTGCAGAAGGCCAGCATAAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACTGGCAGGGCCAAGTCTaGAGTGTCACTGATGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: NTTQGNFPLNFPELSFRDWQGQV*SVTDGF Trigger: GAATCCATCAGTGACACTGCAGACTTGGCCCTGCCA...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGTTGGTTATATAACCCTTACCACATGACCACCCTAGAAATTACCTTTATGTCTTTCAGGGCATaGGAGTCGATCAGAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVGWLYNPYHMTTLEITFMSFRA*ESIRIG Trigger: GCCAATTCTGATCGACTCCCATGCCCTGAAAGACAT...AAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTTATATAACCAACCAACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATCTCCAGCTCATACAGTaGTGGCCCCAGGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RLDISHFHSHKDFRNMTNLQLIQ*WPQDVF Trigger: AAAGACATCCTGGGGCCACCACTGTATGAGCTGGAG...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| 3UTR CAA 72 bp | GTGGCTAAGGCATCAGAGTTTGAGATCACCCTGCTTTaGTTCCTGGTAAGCTTTTGTTTCAAAAATGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VAKASEFEITLL*FLVSFCFKNGN Trigger: GTTTCCATTTTTGAAACAAAAGCTTACCAGGAACAAAAGCAGGGTGATCTCAAACTCTGATGCCTTAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| 3UTR CAA 72 bp | AACCCTTACCACATGACCACCCTAGAAATTACCTTTTaGATAAGTCTTGAGAAAGGTTGGTCATGGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: NPYHMTTLEITF*ISLEKGWSWFT Trigger: CGTGAACCATGACCAACCTTTCTCAAGACTTATCAAAAAGGTAATTTCTAGGGTGGTCATGTGGTAAGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTTGCTTCCACAAACATaGTTTTGCCACCCAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLLPQT*FCHPRE Trigger: CTCCCTTGGGTGGCAAAATCATGTTTGTGGAAGCAA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTTCTGCAACTTTCACTaGCACAGCACGGCAAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSFCNFH*HSTANS Trigger: GCTATTTGCCGTGCTGTGGCAGTGAAAGTTGCAGAA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAGCTTGGCTTCCTTATaGTGGCCTTCTGCAACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSLASL*WPSATF Trigger: GAAAGTTGCAGAAGGCCAGCATAAGGAAGCCAAGCT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCCAGCACATGTTCTTTaGAACCTTCTCCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSPAHVL*NLLHQP Trigger: TGGCTGATGGAGAAGGTTGCAAAGAACATGTGCTGG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCTTTAGCTCATACTGGCTTTCTGGTCTTTGGTGACGTAGGAAAGGGAAAATTTATGAGCCTGTTCTaGCATACTAGATGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AALAHTGFLVFGDVGKGKFMSLF*HTRCSY Trigger: ATAAGAACATCTAGTATGCCAGAACAGGCTCATAAA...TTTTCCCTTTCCTACGTCACCAAAGACCAGAAAGCCAGTATGAGCTAAAGCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGTCCAGCAAAGCAGGTaGAATAGTAGCAGTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSVQQSR*NSSSGV Trigger: AACACCACTGCTACTATTCCACCTGCTTTGCTGGAC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTCCTGTGTGTACCCTaGAACCTGAATGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLLCVP*NLNDLH Trigger: ATGGAGATCATTCAGGTTCCAGGGTACACACAGGAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGATGTCTTTCAGGGCATaGGAGTCGATCAGAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSMSFRA*ESIRIG Trigger: GCCAATTCTGATCGACTCCCATGCCCTGAAAGACAT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCTGGGAAGTGCAGATaGATGTCTGTGTTGTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAGKCR*MSVLSR Trigger: TCTTGACAACACAGACATCCATCTGCACTTCCCAGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGGTAACACCAGCAGATaGTCCATCTTTTGTGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSGNTSR*SIFCDS Trigger: GCTGTCACAAAAGATGGACCATCTGCTGGTGTTACC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAGTCTGCAGTGTCACTaGTGGATTCAGGTTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSLQCH*WIQVLH Trigger: ATGCAAAACCTGAATCCATCAGTGACACTGCAGACT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTTCTCTTTTAAGACCTaGACAATCTGGAACCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSFSFKT*TIWNRH Trigger: GTGCCGGTTCCAGATTGTGCAGGTCTTAAAAGAGAA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGCTCCTCCCTGCTTTTaGAGATATTGGGAAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSAPPCF*RYWEIP Trigger: AGGAATTTCCCAATATCTGCAAAAGCAGGGAGGAGC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | ATACCACAAATACCTTCAGCACCCTATTTTATAAGCTACTTCCATCTGCTGCTTGATGGATTCAGGTTTTaGATCTTCCAGCACATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPQIPSAPYFISYFHLLLDGFRF*IFQHMF Trigger: GAACATGTGCTGGAAGATGCAAAACCTGAATCCATC...AAGCAGCAGATGGAAGTAGCTTATAAAATAGGGTGCTGAAGGTATTTGTGGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCAGGTGGTATTTCTTTaGATTGCTTCGAAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSQVVFL*IASKPA Trigger: AGCTGGCTTCGAAGCAATGCAAAGAAATACCACCTG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAAGTGTAGTGTGGTTTaGGCCAATTACTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSKCSVV*ANYCPQ Trigger: TTGTGGGCAGTAATTGGCCCAAACCACACTACACTT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACGTCCAGCAAAGCAGGTaGAATAGTAGCAGTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTTQGNFPLNFPELSFRDVQQSR*NSSSGV Trigger: AACACCACTGCTACTATTCCACCTGCTTTGCTGGAC...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | AATTTGGGTTTCTCCCTTATCCTAATTCCAATTCTAGATCATAGAGTTTGGTTCCTCCTGTGTGTACCCTaGAACCTGAATGATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLGFSLILIPILDHRVWFLLCVP*NLNDLH Trigger: ATGGAGATCATTCAGGTTCCAGGGTACACACAGGAG...GAACCAAACTCTATGATCTAGAATTGGAATTAGGATAAGGGAGAAACCCAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTTTAATTCCACCCACTaGAAGAACAAGCCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSFNSTH*KNKPSQ Trigger: CTGAGAGGGCTTGTTCTTCCAGTGGGTGGAATTAAA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| 3UTR CAA 72 bp | AAGCCCTTGGGAAAAACTATCGTCACTGGTAATGATTaGGAATTTTTGCTGGAGACACTGCCTTATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: KPLGKTIVTGND*EFLLETLPYTQ Trigger: TTGTGTATAAGGCAGTGTCTCCAGCAAAAATTCCAAATCATTACCAGTGACGATAGTTTTTCCCAAGGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGGTTTGCGAGTCTTCTaGAGTAATTTCAGACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSGLRVF*SNFRPS Trigger: TGAAGGTCTGAAATTACTTCAGAAGACTCGCAAACC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTTGACACAGACTTTATaGGCCTGTTCTGGCATACTA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLTQTL*ACSGIL Trigger: TAGTATGCCAGAACAGGCTCATAAAGTCTGTGTCAA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGTTGGCAGTTGCTATaGAAAGAACTTGGGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCWQLL*KELGKG Trigger: ACCTTTCCCAAGTTCTTTTCATAGCAACTGCCAACA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR TCA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACAGTCTGCAGTGTCACTaGTGGATTCAGGTTTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTTQGNFPLNFPELSFRDSLQCH*WIQVLH Trigger: ATGCAAAACCTGAATCCATCAGTGACACTGCAGACT...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACGCTCCTCCCTGCTTTTaGAGATATTGGGAAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTTQGNFPLNFPELSFRDAPPCF*RYWEIP Trigger: AGGAATTTCCCAATATCTGCAAAAGCAGGGAGGAGC...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCTCAATTTAGCAACTaGAGGGACGGACATATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSQFSN*RDGHIQ Trigger: TTGGATATGTCCGTCCCTGCAGTTGCTAAATTGAGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR GCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGATGGATTCAGGTTTTaGATCTTCCAGCACATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSDGFRF*IFQHMF Trigger: GAACATGTGCTGGAAGATGCAAAACCTGAATCCATC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACAAGTGTAGTGTGGTTTaGGCCAATTACTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: NTTQGNFPLNFPELSFRDKCSVV*ANYCPQ Trigger: TTGTGGGCAGTAATTGGCCCAAACCACACTACACTT...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGACGGCATCTAAGATCTaGAGCTTCTCTTTGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSTASKI*SFSLLL Trigger: AAGCAACAAAGAGAAGCTCCAGATCTTAGATGCCGT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACTCTTCAGTTTTTCCATaGCATAATGGTCATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLETLPYTQFNSPHRHLYSSVFP*HNGHCP Trigger: TGGACAATGACCATTATGCCATGGAAAAACTGAAGA...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACTTGACACAGACTTTATaGGCCTGTTCTGGCATACTA | + |
|
Preference number: 4 (lower is better) Translates to: NTTQGNFPLNFPELSFRDLTQTL*ACSGIL Trigger: TAGTATGCCAGAACAGGCTCATAAAGTCTGTGTCAA...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR TCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGGTCTTTTTATCTCCTTaGCACAGACTTTATGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSVFLSP*HRLYEP Trigger: AGGCTCATAAAGTCTGTGTCAAGGAGATAAAAAGAC...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGTTTCTCCCTTATCCTAATTCCAATTCTAGATCATAGAGTTTGGTTCTCTCAATTTAGCAACTaGAGGGACGGACATATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NLGFSLILIPILDHRVWFSQFSN*RDGHIQ Trigger: TTGGATATGTCCGTCCCTGCAGTTGCTAAATTGAGA...GAACCAAACTCTATGATCTAGAATTGGAATTAGGATAAGGGAGAAACCCAAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGCTTTTGCAGATATTaGGAAATTCCTCAAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCFCRY*EIPQVG Trigger: ACCGACTTGAGGAATTTCCCAATATCTGCAAAAGCA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | AGACTGGACATCTCTCATTTTCATTCCCATAAGGACTTTAGGAATATGACTAATTGCTTTTGCAGATATTaGGAAATTCCTCAAGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLDISHFHSHKDFRNMTNCFCRY*EIPQVG Trigger: ACCGACTTGAGGAATTTCCCAATATCTGCAAAAGCA...ATTAGTCATATTCCTAAAGTCCTTATGGGAATGAAAATGAGAGATGTCCAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCTTCAGTTTTTCCATaGCATAATGGTCATTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSSVFP*HNGHCP Trigger: TGGACAATGACCATTATGCCATGGAAAAACTGAAGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CCA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTTTATGAGCCTGTTCTaGCATACTAGATGTTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SFGASNKLCLIIKFSLCSFMSLF*HTRCSY Trigger: ATAAGAACATCTAGTATGCCAGAACAGGCTCATAAA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| 3UTR CAA 72 bp | TTAGCCATTTTCAGTACAGGTAAGCCTTATATTGAGTaGGTTGTCCTGAACTTATGTAGTTATATTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAIFSTGKPYIE*VVLNLCSYIWG Trigger: ACCCCAAATATAACTACATAAGTTCAGGACAACCAACTCAATATAAGGCTTACCTGTACTGAAAATGGCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS GCA 90 bp | GTGCTCTGCAACGACGTGCCCTTGAGCAAGCGGCTCCGCACCAGCTaGAAGTTGCGGGCCGTGTCCACACTTGTGCGCATAGTGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLCNDVPLSKRLRTS*KLRAVSTLVRIVEP Trigger: TGGCTCCACTATGCGCACAAGTGTGGACACGGCCCGCAACTTGCAGCTGGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGCAGAGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 90 bp | CTGGCCGGGTCGGGTGTGTTGGGGATGACTCCTAGAATGGTGCTCTaGAACGACGTGCCCTTGAGCAAGCGGCTCCGCACCAGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAGSGVLGMTPRMVL*NDVPLSKRLRTSCK Trigger: CTTGCAGCTGGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGCAGAGCACCATTCTAGGAGTCATCCCCAACACACCCGACCCGGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 90 bp | ACTGCCAGGGCAGCCGTTCCAATTCTGTGCAATGGTGGCAGGTCCTaGGTGTCGCTGGCCGGGTCGGGTGTGTTGGGGATGACTCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TARAAVPILCNGGRS*VSLAGSGVLGMTPR Trigger: TCTAGGAGTCATCCCCAACACACCCGACCCGGCCAGCGACACGCAGGACCTGCCACCATTGCACAGAATTGGAACGGCTGCCCTGGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 90 bp | CCGCCTGTGCCCTCGAATGTCAGACTGGTCACACACACCCCCAAGTaGAATCCTGTGGAACTCCCGACCCAGAGTCTTGGCCACGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PPVPSNVRLVTHTPK*NPVELPTQSLGHGS Trigger: AGATCCGTGGCCAAGACTCTGGGTCGGGAGTTCCACAGGATTGCACTTGGGGGTGTGTGTGACCAGTCTGACATTCGAGGGCACAGGCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 90 bp | CCTCGAATGTCAGACTGGTCACACACACCCCCAAGTGCAATCCTGTaGAACTCCCGACCCAGAGTCTTGGCCACGGATCTCCCCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: PRMSDWSHTPPSAIL*NSRPRVLATDLPTL Trigger: AAGTGTGGGGAGATCCGTGGCCAAGACTCTGGGTCGGGAGTTCCACAGGATTGCACTTGGGGGTGTGTGTGACCAGTCTGACATTCGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS TCA 90 bp | TTGCCACCCAAGGGAGTCCATGCTAACCCTATTGCCACTCCAGGTTaGCTCAAACGCTCAGATACCTCCAGCTCATACAGTGGTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPPKGVHANPIATPG*LKRSDTSSSYSGGP Trigger: GGGGCCACCACTGTATGAGCTGGAGGTATCTGAGCGTTTGAGTCAACCTGGAGTGGCAATAGGGTTAGCATGGACTCCCTTGGGTGGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS GCA 90 bp | CCTTCTCCATCAGCCACATCCGAACGGTCCAGCTTGGCTTCCTTATaGTGGCCTTCTGCAACTTTCACTGCCACAGCACGGCAAATAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPSATSERSSLASL*WPSATFTATARQIA Trigger: GGCTATTTGCCGTGCTGTGGCAGTGAAAGTTGCAGAAGGCCAGCATAAGGAAGCCAAGCTGGACCGTTCGGATGTGGCTGATGGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 90 bp | TGGTGGCCCCAGGATGTCTTTCAGGGCATGGGAGTCGATCAGAATTaGCATTTCAGGTGGCAGGGCCAAGTCTGCAGTGTCACTGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: WWPQDVFQGMGVDQN*HFRWQGQVCSVTDG Trigger: TCCATCAGTGACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCATGCCCTGAAAGACATCCTGGGGCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 90 bp | ACCTCCAGCTCATACAGTGGTGGCCCCAGGATGTCTTTCAGGGCATaGGAGTCGATCAGAATTGGCATTTCAGGTGGCAGGGCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSSSYSGGPRMSFRA*ESIRIGISGGRAKS Trigger: AGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCATGCCCTGAAAGACATCCTGGGGCCACCACTGTATGAGCTGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CCA 90 bp | CAGCTAATGGCGAGATGGGCAGACTCCTTCATGACGTCCCCAAGCTaGCCGGTCAGTGTTAGTTGGCCTTCACCGTCCATTCTACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLMARWADSFMTSPS*PVSVSWPSPSILLA Trigger: AGCAAGTAGAATGGACGGTGAAGGCCAACTAACACTGACCGGCCAGCTTGGGGACGTCATGAAGGAGTCTGCCCATCTCGCCATTAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCGCACCAGCTGCAAGTaGCGGGCCGTGTCCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRRTSCK*RAVSTL Trigger: AAGTGTGGACACGGCCCGCAACTTGCAGCTGGTGCG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | CAAAAATGGAAACAAAACATGGGCTGGCGCCAGGCGTTGGTGGCGCATACCTTTCTCCCCACACTTGTTTaGCCTACTCCAGGCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QKWKQNMGWRQALVAHTFLPTLV*PTPGGP Trigger: TGGCCCGCCTGGAGTAGGCAAAACAAGTGTGGGGAG...AAAGGTATGCGCCACCAACGCCTGGCGCCAGCCCATGTTTTGTTTCCATTTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS GCA 90 bp | AGCACGGCAAATAGCCCCAAACTTTCTGTCCAGAGAACGGACTCCTaGTTCTCTGGTGTATCTGGTAATGATGGCCAGAGTGGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STANSPKLSVQRTDS*FSGVSGNDGQSGVL Trigger: CAGCACACCACTCTGGCCATCATTACCAGATACACCAGAGAAGCAGGAGTCCGTTCTCTGGACAGAAAGTTTGGGGCTATTTGCCGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS GCA 90 bp | AGGTGGCAGGGCCAAGTCTGCAGTGTCACTGATGGATTCAGGTTTTaGATCTTCCAGCACATGTTCTTTGCAACCTTCTCCATCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RWQGQVCSVTDGFRF*IFQHMFFATFSISH Trigger: GTGGCTGATGGAGAAGGTTGCAAAGAACATGTGCTGGAAGATGCAAAACCTGAATCCATCAGTGACACTGCAGACTTGGCCCTGCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 90 bp | TGTCTGACGTTGCTTGGGATCTCTTCAAGGTCCTTTTCGTTCCTCTaGGGAATTATGATCTGCTTCAGTCCTGCTCGGTGTGCTGCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLTLLGISSRSFSFL*GIMICFSPARCAAR Trigger: CCTAGCAGCACACCGAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGAACGAAAAGGACCTTGAAGAGATCCCAAGCAACGTCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS CCA 90 bp | GATGTCTTTCAGGGCATGGGAGTCGATCAGAATTGGCATTTCAGGTaGCAGGGCCAAGTCTGCAGTGTCACTGATGGATTCAGGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DVFQGMGVDQNWHFR*QGQVCSVTDGFRFC Trigger: GCAAAACCTGAATCCATCAGTGACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCATGCCCTGAAAGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CCA 90 bp | GCAGACTCCTTCATGACGTCCCCAAGCTGGCCGGTCAGTGTTAGTTaGCCTTCACCGTCCATTCTACTTGCTTCCACAAACATGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ADSFMTSPSWPVSVS*PSPSILLASTNMIL Trigger: CAAAATCATGTTTGTGGAAGCAAGTAGAATGGACGGTGAAGGCCAACTAACACTGACCGGCCAGCTTGGGGACGTCATGAAGGAGTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS GCA 90 bp | TCCCTGCTTTTGCAGATATTGGGAAATTCCTCAAGTCGGTCCAGCTaGTCCACTTCAGCCACGGGATATGGCTTCTCTTTTAAGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLLQILGNSSSRSS*STSATGYGFSFKTC Trigger: GCAGGTCTTAAAAGAGAAGCCATATCCCGTGGCTGAAGTGGAGCAGCTGGACCGACTTGAGGAATTTCCCAATATCTGCAAAAGCAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 90 bp | ATGGGAGTCGATCAGAATTGGCATTTCAGGTGGCAGGGCCAAGTCTaGAGTGTCACTGATGGATTCAGGTTTTGCATCTTCCAGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: MGVDQNWHFRWQGQV*SVTDGFRFCIFQHM Trigger: CATGTGCTGGAAGATGCAAAACCTGAATCCATCAGTGACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS TCA 90 bp | GCTTCTCTTTTAAGACCTGCACAATCTGGAACCGGCACAGGCCTGTaGTCAGTAAAGTGTAGTGTGGTTTGGGCCAATTACTGCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: ASLLRPAQSGTGTGL*SVKCSVVWANYCPQ Trigger: TTGTGGGCAGTAATTGGCCCAAACCACACTACACTTTACTGATCACAGGCCTGTGCCGGTTCCAGATTGTGCAGGTCTTAAAAGAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS TCA 90 bp | GTGTTAGTTGGCCTTCACCGTCCATTCTACTTGCTTCCACAAACATaGTTTTGCCACCCAAGGGAGTCCATGCTAACCCTATTGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: VLVGLHRPFYLLPQT*FCHPRESMLTLLPL Trigger: GAGTGGCAATAGGGTTAGCATGGACTCCCTTGGGTGGCAAAATCATGTTTGTGGAAGCAAGTAGAATGGACGGTGAAGGCCAACTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS TCA 90 bp | TGCTTGGGATCTCTTCAAGGTCCTTTTCGTTCCTCTGCGGAATTATaGTCTGCTTCAGTCCTGCTCGGTGTGCTGCTAGGACTTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CLGSLQGPFRSSAEL*SASVLLGVLLGLCL Trigger: AAGACAAAGTCCTAGCAGCACACCGAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGAACGAAAAGGACCTTGAAGAGATCCCAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGCAACGACGTGCCCTaGAGCAAGCGGCTCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCNDVP*SKRLRT Trigger: GGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGCA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCAGCTCCTCCCTGCTTTaGCAGATATTGGGAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRSSSLL*QILGNS Trigger: GGAATTTCCCAATATCTGCAAAAGCAGGGAGGAGCT...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | ACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCGATCAGTTGTACTTTaGTTCCAAGGAAGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TVWKSCVCVCVCVCVCVRRSVVL*FQGSST Trigger: GGTGGAGCTTCCTTGGAACAAAAGTACAACTGATCG...GCGCACACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS TCA 90 bp | TCAGAATTGGCATTTCAGGTGGCAGGGCCAAGTCTGCAGTGTCACTaGTGGATTCAGGTTTTGCATCTTCCAGCACATGTTCTTTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SELAFQVAGPSLQCH*WIQVLHLPAHVLCN Trigger: GTTGCAAAGAACATGTGCTGGAAGATGCAAAACCTGAATCCATCAGTGACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 90 bp | GTCTCACAGCCAAGTATTCCAAAACCCTCCTCTTCAGTTTTTCCATaGCATAATGGTCATTGTCCAGAAGAATCCGGGCTGCCCGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VSQPSIPKPSSSVFP*HNGHCPEESGLPEC Trigger: ACATTCGGGCAGCCCGGATTCTTCTGGACAATGACCATTATGCCATGGAAAAACTGAAGAGGAGGGTTTTGGAATACTTGGCTGTGAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CCA 90 bp | GTACCCTGGAACCTGAATGATCTCCATCCTGTCCAGCAAAGCAGGTaGAATAGTAGCAGTGGTGTTGGCAGTTGCTATGAAAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: VPWNLNDLHPVQQSR*NSSSGVGSCYEKNL Trigger: CAAGTTCTTTTCATAGCAACTGCCAACACCACTGCTACTATTCCACCTGCTTTGCTGGACAGGATGGAGATCATTCAGGTTCCAGGGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CCA 90 bp | TGTAAACATAGATATGAGAATCATCACCTCCAGCTCATACAGTGGTaGCCCCAGGATGTCTTTCAGGGCATGGGAGTCGATCAGAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: CKHRYENHHLQLIQW*PQDVFQGMGVDQNW Trigger: CCAATTCTGATCGACTCCCATGCCCTGAAAGACATCCTGGGGCCACCACTGTATGAGCTGGAGGTGATGATTCTCATATCTATGTTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| CDS CCA 90 bp | CAGTGTAAACATAGATATGAGAATCATCACCTCCAGCTCATACAGTaGTGGCCCCAGGATGTCTTTCAGGGCATGGGAGTCGATCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QCKHRYENHHLQLIQ*WPQDVFQGMGVDQN Trigger: ATTCTGATCGACTCCCATGCCCTGAAAGACATCCTGGGGCCACCACTGTATGAGCTGGAGGTGATGATTCTCATATCTATGTTTACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCGCACCAGCTGCAAGTaGCGGGCCGTGTCCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRTSCK*RAVSTL Trigger: AAGTGTGGACACGGCCCGCAACTTGCAGCTGGTGCG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
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| CDS-3UTR CAA 90 bp | AATTTGGGTTTCTCCCTTATCCTAATTCCAATTCTAGATCATAGAGTTTGGTTCTGCAACGACGTGCCCTaGAGCAAGCGGCTCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: NLGFSLILIPILDHRVWFCNDVP*SKRLRT Trigger: GGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGCA...GAACCAAACTCTATGATCTAGAATTGGAATTAGGATAAGGGAGAAACCCAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| CDS-3UTR CAA 90 bp | AAGGACTGTTCTGGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATACTGGTAGAGCTTCCCTaGGAAGATTATCTAAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KDCSGNWELCGEPVQNVILVELP*EDYLKD Trigger: GTCTTTTAGATAATCTTCCAAGGGAAGCTCTACCAG...TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| CDS-3UTR CAA 90 bp | AAGGACTGTTCTGGCAACTGGGAGCTTTGTGGGGAGCCAGTCCAGAACGTAATATGTGAAGTTATGGTTTaGTTCAGGATCCAACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KDCSGNWELCGEPVQNVICEVMV*FRIQHL Trigger: GAGGTGTTGGATCCTGAACAAAACCATAACTTCACA...TATTACGTTCTGGACTGGCTCCCCACAAAGCTCCCAGTTGCCAGAACAGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| CDS-3UTR CAA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACTCCGAACGGTCCAGCTaGGCTTCCTTATGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLETLPYTQFNSPHRHLYSERSS*ASLCWP Trigger: AGGCCAGCATAAGGAAGCCAAGCTGGACCGTTCGGA...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
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| CDS GCA 90 bp | GGGATCTCTTCAAGGTCCTTTTCGTTCCTCTGCGGAATTATGATCTaGTTCAGTCCTGCTCGGTGTGCTGCTAGGACTTTGTCTTTAATT | + |
|
Preference number: 5 (lower is better) Translates to: GISSRSFSFLCGIMI*FSPARCAARTLSLI Trigger: AATTAAAGACAAAGTCCTAGCAGCACACCGAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGAACGAAAAGGACCTTGAAGAGATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTCCCCACACTTGTTTaGCCTACTCCAGGCGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLPTLV*PTPGGP Trigger: TGGCCCGCCTGGAGTAGGCAAAACAAGTGTGGGGAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TGTATGACTGTTTGGAAAAGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGGTCTTCAAGCCATaGATGATACGACCAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: CMTVWKSCVCVCVCVCVCTVFKP*MIRPGI Trigger: TATGCCTGGTCGTATCATCAATGGCTTGAAGACCGT...ACACACACACACACACACACACACACACACACAGCTTTTCCAAACAGTCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCCGAACGGTCCAGCTaGGCTTCCTTATGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSERSS*ASLCWP Trigger: AGGCCAGCATAAGGAAGCCAAGCTGGACCGTTCGGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | ATACCACAAATACCTTCAGCACCCTATTTTATAAGCTACTTCCATCTGCTGCTTTCCAGCACATGTTCTTaGCAACCTTCTCCATCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPQIPSAPYFISYFHLLLSSTCS*QPSPSA Trigger: GGCTGATGGAGAAGGTTGCAAAGAACATGTGCTGGA...AAGCAGCAGATGGAAGTAGCTTATAAAATAGGGTGCTGAAGGTATTTGTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAGACCAGGTCTGGTCTaGACAGGAAAGCCACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRPGLV*TGKPPS Trigger: TGATGGTGGCTTTCCTGTCAAGACCAGACCTGGTCT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS-3UTR CAA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACTGTCCAGGCGATCAGTaGTACTTTTGTTCCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLETLPYTQFNSPHRHLYCPGDQ*YFCSKE Trigger: TTCCTTGGAACAAAAGTACAACTGATCGCCTGGACA...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGAGACACTGCCTTATACACAATTTAACAGCCCTCATAGACATCTTTACAATAGGAACACTGGATaGTTAACCCCAACGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLETLPYTQFNSPHRHLYNRNTG*LTPTVF Trigger: GAAGACCGTTGGGGTTAACAATCCAGTGTTCCTATT...GTAAAGATGTCTATGAGGGCTGTTAAATTGTGTATAAGGCAGTGTCTCCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCCAGCACATGTTCTTaGCAACCTTCTCCATCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSSTCS*QPSPSA Trigger: GGCTGATGGAGAAGGTTGCAAAGAACATGTGCTGGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS TCA 90 bp | GCTATAACCCTCTTGTCGTCATCTTGTTTAGGTTTGCGAGTCTTCTaGAGTAATTTCAGACCTTCAATCTGTCTAACAAGCAGAGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: AITLLSSSCLGLRVF*SNFRPSICLTSRGM Trigger: CATACCTCTGCTTGTTAGACAGATTGAAGGTCTGAAATTACTTCAGAAGACTCGCAAACCTAAACAAGATGACGACAAGAGGGTTATAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAGCTCCTCCCTGCTTTaGCAGATATTGGGAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSSSLL*QILGNS Trigger: GGAATTTCCCAATATCTGCAAAAGCAGGGAGGAGCT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCGATCAGTTGTACTTTaGTTCCAAGGAAGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRSVVL*FQGSST Trigger: GGTGGAGCTTCCTTGGAACAAAAGTACAACTGATCG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGACGGTCTTCAAGCCATaGATGATACGACCAGGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSTVFKP*MIRPGI Trigger: TATGCCTGGTCGTATCATCAATGGCTTGAAGACCGT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTATTGCCACTCCAGGTaGACTCAAACGCTCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSYCHSR*TQTLRY Trigger: GTATCTGAGCGTTTGAGTCAACCTGGAGTGGCAATA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCCACAAACATGATTTaGCCACCCAAGGGAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSTNMI*PPKGVH Trigger: ATGGACTCCCTTGGGTGGCAAAATCATGTTTGTGGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTCAGGTGGTATTTCTTaGCATTGCTTCGAAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSSGGIS*HCFEAS Trigger: GCTGGCTTCGAAGCAATGCAAAGAAATACCACCTGA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTGCTTTTGCAGATATaGGGAAATTCCTCAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLLLQI*GNSSSR Trigger: CCGACTTGAGGAATTTCCCAATATCTGCAAAAGCAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGTCCAGGCGATCAGTaGTACTTTTGTTCCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCPGDQ*YFCSKE Trigger: TTCCTTGGAACAAAAGTACAACTGATCGCCTGGACA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAATAGGAACACTGGATaGTTAACCCCAACGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSNRNTG*LTPTVF Trigger: GAAGACCGTTGGGGTTAACAATCCAGTGTTCCTATT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGTGCTGCTAGGACTTaGTCTTTAATTCCACCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCAART*SLIPPT Trigger: AGTGGGTGGAATTAAAGACAAAGTCCTAGCAGCACA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCTGGTAGAGCTTCCCTaGGAAGATTATCTAAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSLVELP*EDYLKD Trigger: GTCTTTTAGATAATCTTCCAAGGGAAGCTCTACCAG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGTGAAGTTATGGTTTaGTTCAGGATCCAACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSCEVMV*FRIQHL Trigger: GAGGTGTTGGATCCTGAACAAAACCATAACTTCACA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGATAGTAGCAGTGGTGTaGGCAGTTGCTATGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSIVAVV*AVAMKR Trigger: TCTTTTCATAGCAACTGCCAACACCACTGCTACTAT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGTGGTATTTCTTTGCATaGCTTCGAAGCCAGCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSWYFFA*LRSQLM Trigger: CATTAGCTGGCTTCGAAGCAATGCAAAGAAATACCA...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACATAGTAGCAGTGGTGTaGGCAGTTGCTATGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: NTTQGNFPLNFPELSFRDIVAVV*AVAMKR Trigger: TCTTTTCATAGCAACTGCCAACACCACTGCTACTAT...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGATCTGGAGCTTCTCTTaGTTGCTTGTTCGAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSIWSFS*LLVRII Trigger: AATTATTCGAACAAGCAACAAAGAGAAGCTCCAGAT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034141.18 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCAAGTTATTTTTCAGTaGTCTCACAGCCAAGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSQVIFQ*SHSQVF Trigger: GAATACTTGGCTGTGAGACAACTGAAAAATAACTTG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGAGATGGATGTCTGTGTaGTCAAGAAGATCAAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRWMSV*SRRSKL Trigger: AAGTTTTGATCTTCTTGACAACACAGACATCCATCT...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | TCATTTGGTGCCTCAAACAAGCTTTGCCTCATAATTAAATTCAGCTTATGTTCGCGATCAGTTGTACTTTaGTTCCAAGGAAGATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SFGASNKLCLIIKFSLCSRSVVL*FQGRLS Trigger: AGATAATCTTCCTTGGAACAAAAGTACAACTGATCG...CGAACATAAGCTGAATTTAATTATGAGGCAAAGCTTGTTTGAGGCACCAAATGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122188.10 |
||
| CDS-3UTR CAA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACATCTGGAGCTTCTCTTaGTTGCTTGTTCGAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: NTTQGNFPLNFPELSFRDIWSFS*LLVRII Trigger: AATTATTCGAACAAGCAACAAAGAGAAGCTCCAGAT...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS-3UTR CAA 90 bp | AACACTACACAGGGAAATTTTCCATTAAATTTTCCAGAACTTAGCTTCAGAGACCAAGTTATTTTTCAGTaGTCTCACAGCCAAGTATTC | + |
|
Preference number: 5 (lower is better) Translates to: NTTQGNFPLNFPELSFRDQVIFQ*SHSQVF Trigger: GAATACTTGGCTGTGAGACAACTGAAAAATAACTTG...GTCTCTGAAGCTAAGTTCTGGAAAATTTAATGGAAAATTTCCCTGTGTAGTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | CTGAACTGCCAGGGCAGCCGTTCCAATTCTGTGCAATaGTGGCAGGTCCTGCGTGTCGCTGGCCGGGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LNCQGSRSNSVQ*WQVLRVAGRVG Trigger: CCCGACCCGGCCAGCGACACGCAGGACCTGCCACCATTGCACAGAATTGGAACGGCTGCCCTGGCAGTTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 90 bp | TGCAACGACGTGCCCTTGAGCAAGCGGCTCCGCACCAGCTGCAAGTaGCGGGCCGTGTCCACACTTGTGCGCATAGTGGAGCCAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CNDVPLSKRLRTSCK*RAVSTLVRIVEPGS Trigger: GCTGCCTGGCTCCACTATGCGCACAAGTGTGGACACGGCCCGCAACTTGCAGCTGGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS TCA 72 bp | CCTGCGTGTCGCTGGCCGGGTCGGGTGTGTTGGGGATaGCTCCTAGAATGGTGCTCTGCAACGACGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PACRWPGRVCWG*LLEWCSATTCP Trigger: AGGGCACGTCGTTGCAGAGCACCATTCTAGGAGTCATCCCCAACACACCCGACCCGGCCAGCGACACGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 72 bp | GCAGCCGTTCCAATTCTGTGCAATGGTGGCAGGTCCTaGGTGTCGCTGGCCGGGTCGGGTGTGTTGGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AAVPILCNGGRS*VSLAGSGVLGM Trigger: CATCCCCAACACACCCGACCCGGCCAGCGACACGCAGGACCTGCCACCATTGCACAGAATTGGAACGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | AACTGCCAGGGCAGCCGTTCCAATTCTGTGCAATGGTaGCAGGTCCTGCGTGTCGCTGGCCGGGTCGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NCQGSRSNSVQW*QVLRVAGRVGC Trigger: ACACCCGACCCGGCCAGCGACACGCAGGACCTGCCACCATTGCACAGAATTGGAACGGCTGCCCTGGCAGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 72 bp | GTGCCCTTGAGCAAGCGGCTCCGCACCAGCTGCAAGTaGCGGGCCGTGTCCACACTTGTGCGCATAGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VPLSKRLRTSCK*RAVSTLVRIVE Trigger: CTCCACTATGCGCACAAGTGTGGACACGGCCCGCAACTTGCAGCTGGTGCGGAGCCGCTTGCTCAAGGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 90 bp | GTGTTGGGGATGACTCCTAGAATGGTGCTCTGCAACGACGTGCCCTaGAGCAAGCGGCTCCGCACCAGCTGCAAGTTGCGGGCCGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLGMTPRMVLCNDVP*SKRLRTSCKLRAVS Trigger: GGACACGGCCCGCAACTTGCAGCTGGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGCAGAGCACCATTCTAGGAGTCATCCCCAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 90 bp | TGCAATGGTGGCAGGTCCTGCGTGTCGCTGGCCGGGTCGGGTGTGTaGGGGATGACTCCTAGAATGGTGCTCTGCAACGACGTGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CNGGRSCVSLAGSGV*GMTPRMVLCNDVPL Trigger: CAAGGGCACGTCGTTGCAGAGCACCATTCTAGGAGTCATCCCCAACACACCCGACCCGGCCAGCGACACGCAGGACCTGCCACCATTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 72 bp | TCGGGTGTGTTGGGGATGACTCCTAGAATGGTGCTCTaGAACGACGTGCCCTTGAGCAAGCGGCTCCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SGVLGMTPRMVL*NDVPLSKRLRT Trigger: GGTGCGGAGCCGCTTGCTCAAGGGCACGTCGTTGCAGAGCACCATTCTAGGAGTCATCCCCAACACACCCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 90 bp | AACTCCCGACCCAGAGTCTTGGCCACGGATCTCCCCACACTTGTTTaGCCTACTCCAGGCGGGCCAACAAAACAGAGGATTGGGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NSRPRVLATDLPTLV*PTPGGPTKQRIGPF Trigger: GAAGGGCCCAATCCTCTGTTTTGTTGGCCCGCCTGGAGTAGGCAAAACAAGTGTGGGGAGATCCGTGGCCAAGACTCTGGGTCGGGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 72 bp | CCCTCGAATGTCAGACTGGTCACACACACCCCCAAGTaGAATCCTGTGGAACTCCCGACCCAGAGTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSNVRLVTHTPK*NPVELPTQSLG Trigger: GCCAAGACTCTGGGTCGGGAGTTCCACAGGATTGCACTTGGGGGTGTGTGTGACCAGTCTGACATTCGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | TCAGACTGGTCACACACACCCCCAAGTGCAATCCTGTaGAACTCCCGACCCAGAGTCTTGGCCACGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: SDWSHTPPSAIL*NSRPRVLATDL Trigger: GAGATCCGTGGCCAAGACTCTGGGTCGGGAGTTCCACAGGATTGCACTTGGGGGTGTGTGTGACCAGTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | GCGAGATGGGCAGACTCCTTCATGACGTCCCCAAGCTaGCCGGTCAGTGTTAGTTGGCCTTCACCGTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: ARWADSFMTSPS*PVSVSWPSPSI Trigger: AATGGACGGTGAAGGCCAACTAACACTGACCGGCCAGCTTGGGGACGTCATGAAGGAGTCTGCCCATCTCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS GCA 72 bp | GTCAGACCGTGCTGCTCCAGCTGCTTAGGGATCAGGTaGCTGTGGGCAATCTCTATCTTCTCCTCCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VRPCCSSCLGIR*LWAISIFSSCV Trigger: CACACAGGAGGAGAAGATAGAGATTGCCCACAGGCACCTGATCCCTAAGCAGCTGGAGCAGCACGGTCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 72 bp | TCAGCCACATCCGAACGGTCCAGCTTGGCTTCCTTATaGTGGCCTTCTGCAACTTTCACTGCCACAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SATSERSSLASL*WPSATFTATAR Trigger: CCGTGCTGTGGCAGTGAAAGTTGCAGAAGGCCAGCATAAGGAAGCCAAGCTGGACCGTTCGGATGTGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 72 bp | GTGTGGTTTGGGCCAATTACTGCCCACAACCTGAACTaGCAGGGCAGCCGTTCCAATTCTGTGCAATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VWFGPITAHNLN*QGSRSNSVQWW Trigger: CCACCATTGCACAGAATTGGAACGGCTGCCCTGGCAGTTCAGGTTGTGGGCAGTAATTGGCCCAAACCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | CAAGTGCAATCCTGTGGAACTCCCGACCCAGAGTCTTaGCCACGGATCTCCCCACACTTGTTTTGCCTACTC | + |
|
Preference number: 6 (lower is better) Translates to: QVQSCGTPDPES*PRISPHLFCLL Trigger: GAGTAGGCAAAACAAGTGTGGGGAGATCCGTGGCCAAGACTCTGGGTCGGGAGTTCCACAGGATTGCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 72 bp | CCCAGAGTCTTGGCCACGGATCTCCCCACACTTGTTTaGCCTACTCCAGGCGGGCCAACAAAACAGAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: PRVLATDLPTLV*PTPGGPTKQRI Trigger: AATCCTCTGTTTTGTTGGCCCGCCTGGAGTAGGCAAAACAAGTGTGGGGAGATCCGTGGCCAAGACTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 72 bp | CCAAGTGCAATCCTGTGGAACTCCCGACCCAGAGTCTaGGCCACGGATCTCCCCACACTTGTTTTGCCTACT | + |
|
Preference number: 6 (lower is better) Translates to: PSAILWNSRPRV*ATDLPTLVLPT Trigger: AGTAGGCAAAACAAGTGTGGGGAGATCCGTGGCCAAGACTCTGGGTCGGGAGTTCCACAGGATTGCACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | CAGGGCATGGGAGTCGATCAGAATTGGCATTTCAGGTaGCAGGGCCAAGTCTGCAGTGTCACTGATGGATTC | + |
|
Preference number: 6 (lower is better) Translates to: QGMGVDQNWHFR*QGQVCSVTDGF Trigger: GAATCCATCAGTGACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCATGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | CAGGATGTCTTTCAGGGCATGGGAGTCGATCAGAATTaGCATTTCAGGTGGCAGGGCCAAGTCTGCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QDVFQGMGVDQN*HFRWQGQVCSV Trigger: GACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCATGCCCTGAAAGACATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | TTGACTCAAACGCTCAGATACCTCCAGCTCATACAGTaGTGGCCCCAGGATGTCTTTCAGGGCATGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LTQTLRYLQLIQ*WPQDVFQGMGV Trigger: GACTCCCATGCCCTGAAAGACATCCTGGGGCCACCACTGTATGAGCTGGAGGTATCTGAGCGTTTGAGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS CAA 72 bp | CCAGGATGTCTTTCAGGGCATGGGAGTCGATCAGAATaGGCATTTCAGGTGGCAGGGCCAAGTCTGCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PGCLSGHGSRSE*AFQVAGPSLQC Trigger: ACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATCGACTCCCATGCCCTGAAAGACATCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS GCA 72 bp | ACTTCAGCCACGGGATATGGCTTCTCTTTTAAGACCTaGACAATCTGGAACCGGCACAGGCCTGTGATCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TSATGYGFSFKT*TIWNRHRPVIS Trigger: ACTGATCACAGGCCTGTGCCGGTTCCAGATTGTGCAGGTCTTAAAAGAGAAGCCATATCCCGTGGCTGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CCA 72 bp | AGATATGAGAATCATCACCTCCAGCTCATACAGTGGTaGCCCCAGGATGTCTTTCAGGGCATGGGAGTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: RYENHHLQLIQW*PQDVFQGMGVD Trigger: ATCGACTCCCATGCCCTGAAAGACATCCTGGGGCCACCACTGTATGAGCTGGAGGTGATGATTCTCATATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155433.10 |
||
| CDS CAA 90 bp | GTGTCACTGATGGATTCAGGTTTTGCATCTTCCAGCACATGTTCTTaGCAACCTTCTCCATCAGCCACATCCGAACGGTCCAGCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSLMDSGFASSSTCS*QPSPSATSERSSLA Trigger: AGCCAAGCTGGACCGTTCGGATGTGGCTGATGGAGAAGGTTGCAAAGAACATGTGCTGGAAGATGCAAAACCTGAATCCATCAGTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
||
| CDS CAA 90 bp | AGTTGGCCTTCACCGTCCATTCTACTTGCTTCCACAAACATGATTTaGCCACCCAAGGGAGTCCATGCTAACCCTATTGCCACTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SWPSPSILLASTNMI*PPKGVHANPIATPG Trigger: ACCTGGAGTGGCAATAGGGTTAGCATGGACTCCCTTGGGTGGCAAAATCATGTTTGTGGAAGCAAGTAGAATGGACGGTGAAGGCCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
||
| CDS TCA 72 bp | TCTCTTCAAGGTCCTTTTCGTTCCTCTGCGGAATTATaGTCTGCTTCAGTCCTGCTCGGTGTGCTGCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLQGPFRSSAEL*SASVLLGVLLG Trigger: TCCTAGCAGCACACCGAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGAACGAAAAGGACCTTGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS TCA 72 bp | TTAAGACCTGCACAATCTGGAACCGGCACAGGCCTGTaGTCAGTAAAGTGTAGTGTGGTTTGGGCCAATTAC | + |
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Preference number: 6 (lower is better) Translates to: LRPAQSGTGTGL*SVKCSVVWANY Trigger: GTAATTGGCCCAAACCACACTACACTTTACTGATCACAGGCCTGTGCCGGTTCCAGATTGTGCAGGTCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS GCA 72 bp | TTGCAGATATTGGGAAATTCCTCAAGTCGGTCCAGCTaGTCCACTTCAGCCACGGGATATGGCTTCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LQILGNSSSRSS*STSATGYGFSF Trigger: AAAAGAGAAGCCATATCCCGTGGCTGAAGTGGAGCAGCTGGACCGACTTGAGGAATTTCCCAATATCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS GCA 72 bp | CATGGCATAATGGTCATTGTCCAGAAGAATCCGGGCTaGCCGAATGTCCAGGCGATCAGTTGTACTTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: HGIMVIVQKNPG*PNVQAISCTFV Trigger: AACAAAAGTACAACTGATCGCCTGGACATTCGGGCAGCCCGGATTCTTCTGGACAATGACCATTATGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS GCA 72 bp | AATAGCCCCAAACTTTCTGTCCAGAGAACGGACTCCTaGTTCTCTGGTGTATCTGGTAATGATGGCCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: NSPKLSVQRTDS*FSGVSGNDGQS Trigger: ACTCTGGCCATCATTACCAGATACACCAGAGAAGCAGGAGTCCGTTCTCTGGACAGAAAGTTTGGGGCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS GCA 72 bp | TGGATTCAGGTTTTGCATCTTCCAGCACATGTTCTTTaGAACCTTCTCCATCAGCCACATCCGAACGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WIQVLHLPAHVL*NLLHQPHPNGP Trigger: TGGACCGTTCGGATGTGGCTGATGGAGAAGGTTGCAAAGAACATGTGCTGGAAGATGCAAAACCTGAATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS GCA 72 bp | GATCAGAATTGGCATTTCAGGTGGCAGGGCCAAGTCTaGAGTGTCACTGATGGATTCAGGTTTTGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: DQNWHFRWQGQV*SVTDGFRFCIF Trigger: GAAGATGCAAAACCTGAATCCATCAGTGACACTGCAGACTTGGCCCTGCCACCTGAAATGCCAATTCTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS GCA 72 bp | TTGCTTGGGATCTCTTCAAGGTCCTTTTCGTTCCTCTaGGGAATTATGATCTGCTTCAGTCCTGCTCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LLGISSRSFSFL*GIMICFSPARC Trigger: ACACCGAGCAGGACTGAAGCAGATCATAATTCCGCAGAGGAACGAAAAGGACCTTGAAGAGATCCCAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS CAA 90 bp | ATCTCCATCCTGTCCAGCAAAGCAGGTGGAATAGTAGCAGTGGTGTaGGCAGTTGCTATGAAAAGAACTTGGGAAAGGTCAAAGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ISILSSKAGGIVAVV*AVAMKRTWERSKAT Trigger: TGTGGCCTTTGACCTTTCCCAAGTTCTTTTCATAGCAACTGCCAACACCACTGCTACTATTCCACCTGCTTTGCTGGACAGGATGGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CAA 90 bp | TCATCCAGGCAGCTTGCTGTAACAAAACTTAGATCCTGTCTGACGTaGCTTGGGATCTCTTCAAGGTCCTTTTCGTTCCTCTGCGGAATT | + |
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Preference number: 6 (lower is better) Translates to: SSRQLAVTKLRSCLT*LGISSRSFSFLCGI Trigger: AATTCCGCAGAGGAACGAAAAGGACCTTGAAGAGATCCCAAGCAACGTCAGACAGGATCTAAGTTTTGTTACAGCAAGCTGCCTGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS CCA 72 bp | AACCTGAATGATCTCCATCCTGTCCAGCAAAGCAGGTaGAATAGTAGCAGTGGTGTTGGCAGTTGCTATGAA | + |
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Preference number: 6 (lower is better) Translates to: NLNDLHPVQQSR*NSSSGVGSCYE Trigger: TTCATAGCAACTGCCAACACCACTGCTACTATTCCACCTGCTTTGCTGGACAGGATGGAGATCATTCAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CAA 72 bp | CTGTCCAGCAAAGCAGGTGGAATAGTAGCAGTGGTGTaGGCAGTTGCTATGAAAAGAACTTGGGAAAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSSKAGGIVAVV*AVAMKRTWERS Trigger: TGACCTTTCCCAAGTTCTTTTCATAGCAACTGCCAACACCACTGCTACTATTCCACCTGCTTTGCTGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CAA 72 bp | CCCAGCTTGTCAACCTCATCCAATAGGAACACTGGATaGTTAACCCCAACGGTCTTCAAGCCATTGATGATA | + |
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Preference number: 6 (lower is better) Translates to: PSLSTSSNRNTG*LTPTVFKPLMI Trigger: TATCATCAATGGCTTGAAGACCGTTGGGGTTAACAATCCAGTGTTCCTATTGGATGAGGTTGACAAGCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CAA 72 bp | CAGCTTGCTGTAACAAAACTTAGATCCTGTCTGACGTaGCTTGGGATCTCTTCAAGGTCCTTTTCGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QLAVTKLRSCLT*LGISSRSFSFL Trigger: GAGGAACGAAAAGGACCTTGAAGAGATCCCAAGCAACGTCAGACAGGATCTAAGTTTTGTTACAGCAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS CAA 72 bp | GAAGAATCCGGGCTGCCCGAATGTCCAGGCGATCAGTaGTACTTTTGTTCCAAGGAAGATTATCTAAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: EESGLPECPGDQ*YFCSKEDYLKD Trigger: GTCTTTTAGATAATCTTCCTTGGAACAAAAGTACAACTGATCGCCTGGACATTCGGGCAGCCCGGATTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122188.10 |
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| CDS CAA 90 bp | AACCGATCCTCCAGGCTCACGGCATCTAAGATCTGGAGCTTCTCTTaGTTGCTTGTTCGAATAATTGAAGTTAGAATGTCTGGTAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: NRSSRLTASKIWSFS*LLVRIIEVRMSGRA Trigger: AGCTCTACCAGACATTCTAACTTCAATTATTCGAACAAGCAACAAAGAGAAGCTCCAGATCTTAGATGCCGTGAGCCTGGAGGATCGGTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000155433.10 |
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| CDS CCA 72 bp | TTGAACCGATCCTCCAGGCTCACGGCATCTAAGATCTaGAGCTTCTCTTTGTTGCTTGTTCGAATAATTGAA | + |
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Preference number: 6 (lower is better) Translates to: LNRSSRLTASKI*SFSLLLVRIIE Trigger: TTCAATTATTCGAACAAGCAACAAAGAGAAGCTCCAGATCTTAGATGCCGTGAGCCTGGAGGATCGGTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000155433.10 |
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| CDS CAA 72 bp | ACAGCTCCAGCTGGGAAGTGCAGATGGATGTCTGTGTaGTCAAGAAGATCAAAACTTCCAAAAGCATTAGTC | + |
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Preference number: 6 (lower is better) Translates to: TAPAGKCRWMSV*SRRSKLPKALV Trigger: GACTAATGCTTTTGGAAGTTTTGATCTTCTTGACAACACAGACATCCATCTGCACTTCCCAGCTGGAGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 |
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| CDS TCA 72 bp | GGGAAAGGTCAAAGGCCACATTTAGATAGTGATCTGTaGAGTTATGGTTTTGTTCAGGATCCAACACCTCAA | + |
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Preference number: 6 (lower is better) Translates to: GKGQRPHLDSDL*SYGFVQDPTPQ Trigger: TTGAGGTGTTGGATCCTGAACAAAACCATAACTTCACAGATCACTATCTAAATGTGGCCTTTGACCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000034141.18 ENSMUST00000121673.8 ENSMUST00000122188.10 ENSMUST00000155433.10 |
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| CDS CAA 72 bp | AGGCTCACGGCATCTAAGATCTGGAGCTTCTCTTTGTaGCTTGTTCGAATAATTGAAGTTAGAATGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: RLTASKIWSFSL*LVRIIEVRMSG Trigger: ACCAGACATTCTAACTTCAATTATTCGAACAAGCAACAAAGAGAAGCTCCAGATCTTAGATGCCGTGAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000155433.10 |
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| CDS CAA 72 bp | TCCAGGCTCACGGCATCTAAGATCTGGAGCTTCTCTTaGTTGCTTGTTCGAATAATTGAAGTTAGAATGTCT | + |
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Preference number: 6 (lower is better) Translates to: SRLTASKIWSFS*LLVRIIEVRMS Trigger: AGACATTCTAACTTCAATTATTCGAACAAGCAACAAAGAGAAGCTCCAGATCTTAGATGCCGTGAGCCTGGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000155433.10 |
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| CDS TCA 72 bp | CTCTTGTCGTCATCTTGTTTAGGTTTGCGAGTCTTCTaGAGTAATTTCAGACCTTCAATCTGTCTAACAAGC | + |
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Preference number: 6 (lower is better) Translates to: LLSSSCLGLRVF*SNFRPSICLTS Trigger: GCTTGTTAGACAGATTGAAGGTCTGAAATTACTTCAGAAGACTCGCAAACCTAAACAAGATGACGACAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034141.18 ENSMUST00000155433.10 |
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