Pregenerated sensors for LNX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029228Ensembl transcript IDs: ENSMUST00000039744.13, ENSMUST00000087161.10, ENSMUST00000113531.9, ENSMUST00000117388.8, ENSMUST00000117525.8, ENSMUST00000121690.8, ENSMUST00000127396.8, ENSMUST00000140084.4
Found 272 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACCAGTCACCAGGCGGGGTCACGTTGTGGTTGGAGTCCAGGGCTaGTGGGCTGCAGTCTTCCTGGGCCTCCTGTTCCTTGACTTCCAA | + |
|
Preference number: 1 (lower is better) Translates to: GPVTRRGHVVVGVQG*WAAVFLGLLFLDFQ Trigger: TTGGAAGTCAAGGAACAGGAGGCCCAGGAAGACTGCAGCCCAGCAGCCCTGGACTCCAACCACAACGTGACCCCGCCTGGTGACTGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 90 bp | CCTGGGCCTGGGGATTGCTGGCCATTGCTGATCCAGCCAGCTTCTTaGAAGATGTCTGGGCTGGACTGTCGAACCTGGCGGGACACGACG | + |
|
Preference number: 1 (lower is better) Translates to: PGPGDCWPLLIQPAS*KMSGLDCRTWRDTT Trigger: CGTCGTGTCCCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 90 bp | TGTCATCCCGAGGTCCATAGGAGTCCGGCACGTGCGCATTGCTTCTaGTACGGAACTTCTGCTCCCGCAGCACCGTTAGCCGCAGCACCT | + |
|
Preference number: 1 (lower is better) Translates to: CHPEVHRSPARAHCF*YGTSAPAAPLAAAP Trigger: AGGTGCTGCGGCTAACGGTGCTGCGGGAGCAGAAGTTCCGTAGCAGAAGCAATGCGCACGTGCCGGACTCCTATGGACCTCGGGATGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 90 bp | GGAAGCTGTCATCCCGAGGTCCATAGGAGTCCGGCACGTGCGCATTaGTTCTGCTACGGAACTTCTGCTCCCGCAGCACCGTTAGCCGCA | + |
|
Preference number: 1 (lower is better) Translates to: GSCHPEVHRSPARAH*FCYGTSAPAAPLAA Trigger: TGCGGCTAACGGTGCTGCGGGAGCAGAAGTTCCGTAGCAGAAGCAATGCGCACGTGCCGGACTCCTATGGACCTCGGGATGACAGCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 90 bp | GGGAAGACTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTaGTCAACATGGTTGGCAACGACACTCCCGCTCTTCGTCCTCCGG | + |
|
Preference number: 1 (lower is better) Translates to: GKTSGTVVFSELSLP*STWLATTLPLFVLR Trigger: CCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 90 bp | TCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATaGTTGGCAACGACACTCCCGCTCTTCGTCCTCCGGAGAGCACTT | + |
|
Preference number: 1 (lower is better) Translates to: SGTVVFSELSLPWST*LATTLPLFVLRRAL Trigger: AAGTGCTCTCCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 90 bp | GGATTGCTGGCCATTGCTGATCCAGCCAGCTTCTTGAAAGATGTCTaGGCTGGACTGTCGAACCTGGCGGGACACGACGAGATGGACGCG | + |
|
Preference number: 1 (lower is better) Translates to: GLLAIADPASFLKDV*AGLSNLAGHDEMDA Trigger: CGCGTCCATCTCGTCGTGTCCCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATCAGCAATGGCCAGCAATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 90 bp | TTCCTGGGCCTCCTGTTCCTTGACTTCCAAGGCTTTGAGTACCACTaGGGAGGGTGCGCTCTTCAGTATGGCAACGGCCTCTGTCCGGCT | + |
|
Preference number: 1 (lower is better) Translates to: FLGLLFLDFQGFEYH*GGCALQYGNGLCPA Trigger: AGCCGGACAGAGGCCGTTGCCATACTGAAGAGCGCACCCTCCTCAGTGGTACTCAAAGCCTTGGAAGTCAAGGAACAGGAGGCCCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 90 bp | AGCGCCTTTTCCTGTCCTTGGTCAGGCCATAGTGGGAGGCCCCTTTaGAGCTCACAGACTTCTGCCAAGTTCAGGGTCCACAGACTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: SAFSCPWSGHSGRPL*SSQTSAKFRVHRLQ Trigger: CTGGAGTCTGTGGACCCTGAACTTGGCAGAAGTCTGTGAGCTGCAAAGGGGCCTCCCACTATGGCCTGACCAAGGACAGGAAAAGGCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 90 bp | ACCTTGGGAAGACTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTaGCCTGGTCAACATGGTTGGCAACGACACTCCCGCTCTTCGTCC | + |
|
Preference number: 1 (lower is better) Translates to: TLGRLRGQWCSQSCP*PGQHGWQRHSRSSS Trigger: GGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCTTCCCAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 90 bp | GGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATGGTTaGCAACGACACTCCCGCTCTTCGTCCTCCGGAGAGCACTTAGAG | + |
|
Preference number: 1 (lower is better) Translates to: GQWCSQSCPCPGQHG*QRHSRSSSSGEHLE Trigger: CTCTAAGTGCTCTCCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 90 bp | TTCAACACTGATGACATAGATGGGCAAGTCCCATTCCCTGTGGGATaGTCCCCCTCCGACGGTCATGCCGAGAGACTCGCTGGGGTCTTT | + |
|
Preference number: 1 (lower is better) Translates to: FNTDDIDGQVPFPVG*SPSDGHAERLAGVF Trigger: AAAGACCCCAGCGAGTCTCTCGGCATGACCGTCGGAGGGGGAGCATCCCACAGGGAATGGGACTTGCCCATCTATGTCATCAGTGTTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 90 bp | CGCAACCATCAGGACAGCCATCTTGAGAGCGCCTTTTCCTGTCCTTaGTCAGGCCATAGTGGGAGGCCCCTTTGCAGCTCACAGACTTCT | + |
|
Preference number: 1 (lower is better) Translates to: RNHQDSHLESAFSCP*SGHSGRPLCSSQTS Trigger: AGAAGTCTGTGAGCTGCAAAGGGGCCTCCCACTATGGCCTGACCAAGGACAGGAAAAGGCGCTCTCAAGATGGCTGTCCTGATGGTTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 90 bp | CCGAGAGACTCGCTGGGGTCTTTCCAGACACTTACAACCTTCTCATaGCAGGTGGCTGCAGGCTTAGAAGCTGTGTTCCTCTCTCCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: PRDSLGSFQTLTTFS*QVAAGLEAVFLSPG Trigger: CCCAGGAGAGAGGAACACAGCTTCTAAGCCTGCAGCCACCTGTCATGAGAAGGTTGTAAGTGTCTGGAAAGACCCCAGCGAGTCTCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 90 bp | GCTGGGGTCTTTCCAGACACTTACAACCTTCTCATGACAGGTGGCTaGAGGCTTAGAAGCTGTGTTCCTCTCTCCTGGGCCTGGGGATTG | + |
|
Preference number: 1 (lower is better) Translates to: AGVFPDTYNLLMTGG*RLRSCVPLSWAWGL Trigger: CAATCCCCAGGCCCAGGAGAGAGGAACACAGCTTCTAAGCCTGCAGCCACCTGTCATGAGAAGGTTGTAAGTGTCTGGAAAGACCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 90 bp | ACAGGTGGCTGCAGGCTTAGAAGCTGTGTTCCTCTCTCCTGGGCCTaGGGATTGCTGGCCATTGCTGATCCAGCCAGCTTCTTGAAAGAT | + |
|
Preference number: 1 (lower is better) Translates to: TGGCRLRSCVPLSWA*GLLAIADPASFLKD Trigger: ATCTTTCAAGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGGAGAGAGGAACACAGCTTCTAAGCCTGCAGCCACCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 90 bp | AACGAATCAGGGTTCACCTCCTGTTCTGTCAGAGGCTCCAGACGGTaGCAGAGTACGTGGTGGTTTGGTTCAAACCTCTTCCCCCACGCT | + |
|
Preference number: 1 (lower is better) Translates to: NESGFTSCSVRGSRR*QSTWWFGSNLFPHA Trigger: AGCGTGGGGGAAGAGGTTTGAACCAAACCACCACGTACTCTGTCACCGTCTGGAGCCTCTGACAGAACAGGAGGTGAACCCTGATTCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 90 bp | TCACATCTTTACAGTTACATAAGTACTGTGGTAATTCCAGCCACATaGCCCAGGATGGGGACCAGTCACCAGGCGGGGTCACGTTGTGGT | + |
|
Preference number: 1 (lower is better) Translates to: SHLYSYISTVVIPAT*PRMGTSHQAGSRCG Trigger: ACCACAACGTGACCCCGCCTGGTGACTGGTCCCCATCCTGGGTCATGTGGCTGGAATTACCACAGTACTTATGTAACTGTAAAGATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 90 bp | TCACAGTCAAGGATCTTAGTGCAGAAATGCATTGGAAGAAGATCTTaGATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTT | + |
|
Preference number: 1 (lower is better) Translates to: SQSRILVQKCIGRRS*IAHRMHTRTGAADF Trigger: AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAGATCCTTGACTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCCAGCGGCGTCTCGCTaGCCCCCACCAGCCTTATGG | + |
|
Preference number: 2 (lower is better) Translates to: DLASHTGCTHAQGLLTFCPAASR*PPPALW Trigger: CCATAAGGCTGGTGGGGGGCAGCGAGACGCCGCTGG...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | TACGGAACTTCTGCTCCCGCAGCACCGTTAGCCGCAGCACCTGGCAGGGCTGCCAGACTTCGGGGACAGTaGTGTTCTCAGAGTTGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: YGTSAPAAPLAAAPGRAARLRGQ*CSQSCP Trigger: GGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT...GGCAGCCCTGCCAGGTGCTGCGGCTAACGGTGCTGCGGGAGCAGAAGTTCCGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | GAGCGTCGTTGCCATGAGGCTGGCGCAACCATCAGGACAGCCATCTaGAGAGCGCCTTTTCCTGTCCTTGGTCAGGCCATAGTGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ERRCHEAGATIRTAI*RAPFPVLGQAIVGG Trigger: GCCTCCCACTATGGCCTGACCAAGGACAGGAAAAGGCGCTCTCAAGATGGCTGTCCTGATGGTTGCGCCAGCCTCATGGCAACGACGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | TCCTGGGCCTGGGGATTGCTGGCCATTGCTGATCCAGCCAGCTTCTaGAAAGATGTCTGGGCTGGACTGTCGAACCTGGCGGGACACGAC | + |
|
Preference number: 2 (lower is better) Translates to: SWAWGLLAIADPASF*KDVWAGLSNLAGHD Trigger: GTCGTGTCCCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGTGGCTGCAGGCTTAGAAGCTGTGTTCCTCTCTCCTGGGCCTGGGGATTGCAGGAGGCAGGCACAATaGAAGCAGGGTAAGGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: QVAAGLEAVFLSPGPGDCRRQAQ*KQGKGP Trigger: GGGTCCCTTACCCTGCTTGCATTGTGCCTGCCTCCT...GCAATCCCCAGGCCCAGGAGAGAGGAACACAGCTTCTAAGCCTGCAGCCACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATGGTGCGCTCAAAGGGCCGTaGCCTAGTCCGGTTGCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: RLRGQWCSQSCPCPGQHGALKGP*PSPVAP Trigger: CGGAGCAACCGGACTAGGGCACGGCCCTTTGAGCGC...ACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | GGGCTGCAGTCTTCCTGGGCCTCCTGTTCCTTGACTTCCAAGGCTTaGAGTACCACTGAGGAGGGTGCGCTCTTCAGTATGGCAACGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GLQSSWASCSLTSKA*STTEEGALFSMATA Trigger: GGCCGTTGCCATACTGAAGAGCGCACCCTCCTCAGTGGTACTCAAAGCCTTGGAAGTCAAGGAACAGGAGGCCCAGGAAGACTGCAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCCTCTTCCCCCACGCTaGTCTCCCCTTGATGCATCT | + |
|
Preference number: 2 (lower is better) Translates to: DLASHTGCTHAQGLLTFCPLPPR*SPLDAS Trigger: AGATGCATCAAGGGGAGACCAGCGTGGGGGAAGAGG...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCGGCTGCAGAAACCTCTaGGGAGAGCGTCGTTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: DLASHTGCTHAQGLLTFCGCRNL*GERRCH Trigger: ATGGCAACGACGCTCTCCCCAGAGGTTTCTGCAGCC...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | CCGCTCTTCGTCCTCCGGAGAGCACTTAGAGCTCGGTTGATCTTCTaGAAAGACCGGCTTCTCATAGTGGAGCGCTCAAAGGGCCGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PLFVLRRALRARLIF*KDRLLIVERSKGRA Trigger: GGCACGGCCCTTTGAGCGCTCCACTATGAGAAGCCGGTCTTTCAAGAAGATCAACCGAGCTCTAAGTGCTCTCCGGAGGACGAAGAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | GGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATGGTaGGCAACGACACTCCCGCTCTTCGTCCTCCGGAGAGCACTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: GTVVFSELSLPWSTW*ATTLPLFVLRRALR Trigger: TCTAAGTGCTCTCCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCGGGACACGACGAGATaGACGCGTCTTTCACTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RRSCIAHRMHTRTGAADFRDTTR*TRLSLA Trigger: GGCCAGTGAAAGACGCGTCCATCTCGTCGTGTCCCG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | GGCTGCAGGCTTAGAAGCTGTGTTCCTCTCTCCTGGGCCTGGGGATaGCTGGCCATTGCTGATCCAGCCAGCTTCTTGAAAGATGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GCRLRSCVPLSWAWG*LAIADPASFLKDVW Trigger: CCAGACATCTTTCAAGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGGAGAGAGGAACACAGCTTCTAAGCCTGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTACGCACAGGGGCTGCTaGCTTTCTAGCCTATCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RRSCIAHRMHTRTGAADFTHRGC*LSSLSV Trigger: CACAGATAGGCTAGAAAGTCAGCAGCCCCTGTGCGT...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTACGCACAGGGGCTGCTaGCTTTCTGCTAGCCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: LATATDTHRSAYVQGQEFTHRGC*LSASLS Trigger: AGATAGGCTAGCAGAAAGTCAGCAGCCCCTGTGCGT...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCACAATGCAAGCAGGGTAAGGGACCCCCTCACTCGTCTGAACGAATCAGGGACGCTGGTCTCCCCTTaGTGCATCTGGGACTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RHNASRVRDPLTRLNESGTLVSP*CIWDSK Trigger: TTTTGAGTCCCAGATGCATCAAGGGGAGACCAGCGT...CCCTGATTCGTTCAGACGAGTGAGGGGGTCCCTTACCCTGCTTGCATTGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCGGGGCTGCTTTTGTTaGGGATTACATGGAAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: DLASHTGCTHAQGLLTFCRGCFC*GLHGSC Trigger: ACAGCTTCCATGTAATCCTCAACAAAAGCAGCCCCG...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAATCCAGCCAGCTTCTTaGAAGATGTCTGGGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLIQPAS*KMSGLD Trigger: GTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGAT...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTGAGTTGTCCCTGCCCTaGTCAACATGGTTGGCAACG | + |
|
Preference number: 2 (lower is better) Translates to: RRSCIAHRMHTRTGAADFELSLP*STWLAT Trigger: CGTTGCCAACCATGTTGACCAGGGCAGGGACAACTC...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | ACGACACTCCCGCTCTTCGTCCTCCGGAGAGCACTTAGAGCTCGGTaGATCTTCTTGAAAGACCGGCTTCTCATAGTGGAGCGCTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TTLPLFVLRRALRAR*IFLKDRLLIVERSK Trigger: CTTTGAGCGCTCCACTATGAGAAGCCGGTCTTTCAAGAAGATCAACCGAGCTCTAAGTGCTCTCCGGAGGACGAAGAGCGGGAGTGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAACACTGATGACATAGATGGGCAAGTCCCATTCCCTGTGGGATGCTCCCCCACGCACAGGGGCTGCTaGCTTTCTGCTAGCCTATCT | + |
|
Preference number: 2 (lower is better) Translates to: FNTDDIDGQVPFPVGCSPTHRGC*LSASLS Trigger: AGATAGGCTAGCAGAAAGTCAGCAGCCCCTGTGCGT...GGGGGAGCATCCCACAGGGAATGGGACTTGCCCATCTATGTCATCAGTGTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTAGCTTTATGCCAAGCTaGTCCTCGGGGCTGCTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RRSCIAHRMHTRTGAADFSFMPS*SSGLLL Trigger: CAAAAGCAGCCCCGAGGAGCAGCTTGGCATAAAGCT...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCAGTGCAGAAATGCATTaGAAGAAGATCTTGCATCGC | + |
|
Preference number: 2 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCSAEMH*KKILHR Trigger: GCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCATCTTAGTGCAGAAATaGATTGGAAGAAGATCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: DLASHTGCTHAQGLLTFCILVQK*IGRRSC Trigger: GCAAGATCTTCTTCCAATGCATTTCTGCACTAAGAT...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTAGTGCAGAAATGCATTaGAAGAAGATCTTGCATCGC | + |
|
Preference number: 2 (lower is better) Translates to: LATATDTHRSAYVQGQEFSAEMH*KKILHR Trigger: GCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTAGTGCAGAAATGCATTaGAAGAAGATCTTGCATCGC | + |
|
Preference number: 2 (lower is better) Translates to: RRSCIAHRMHTRTGAADFSAEMH*KKILHR Trigger: GCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR CAA 90 bp | ATCCTGGCCAGGCAAGCGTGTATCATACCCGATGTACTTCTACCGTaGACAGCGAGAAGAATGTCACCACATCTGATTCTTCCGTCATTG | + |
|
Preference number: 2 (lower is better) Translates to: ILARQACIIPDVLLP*TARRMSPHLILPSL Trigger: CAATGACGGAAGAATCAGATGTGGTGACATTCTTCTCGCTGTCAACGGTAGAAGTACATCGGGTATGATACACGCTTGCCTGGCCAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR TCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAGATCAAATAGGTAAATaGCAGTATGGCATGTACATG | + |
|
Preference number: 2 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLDQIGK*QYGMYM Trigger: CATGTACATGCCATACTGTCATTTACCTATTTGATC...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGCTGTGTTCCTTCGCAGTATCACATCTTTACAGTTACATAAGTACTGTGGTAGTGGGAGGCCCCTTTaGAGCTCACAGACTTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: PAVFLRSITSLQLHKYCGSGRPL*SSQTSA Trigger: GGCAGAAGTCTGTGAGCTGCAAAGGGGCCTCCCACT...ACCACAGTACTTATGTAACTGTAAAGATGTGATACTGCGAAGGAACACAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTGTGTTCCTTCGCAGTATCACATCTTTACAGTTACATAAGTACTGTGGTCCTGGTCAACATGGTTaGCAACGACACTCCCGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PAVFLRSITSLQLHKYCGPGQHG*QRHSRS Trigger: AGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGG...ACCACAGTACTTATGTAACTGTAAAGATGTGATACTGCGAAGGAACACAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CCA 90 bp | AATCAGATGAGCTGCACTCTCTGGACTGCCAAATCGAAGGTCATGCCCGTTGATAGTGCAGAAATGCATTaGAAGAAGATCTTGCATCGC | + |
|
Preference number: 2 (lower is better) Translates to: NQMSCTLWTAKSKVMPVDSAEMH*KKILHR Trigger: GCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT...ATCAACGGGCATGACCTTCGATTTGGCAGTCCAGAGAGTGCAGCTCATCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCTGTGTTCCTTCGCAGTATCACATCTTTACAGTTACATAAGTACTGTGGTCTTACAACCTTCTCATaGCAGGTGGCTGCAGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: PAVFLRSITSLQLHKYCGLTTFS*QVAAGL Trigger: TAAGCCTGCAGCCACCTGTCATGAGAAGGTTGTAAG...ACCACAGTACTTATGTAACTGTAAAGATGTGATACTGCGAAGGAACACAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 72 bp | GGGCCGTGCCCTAGTCCGGTTGCTCCGGCCAGAGTCTaGGGAGTTGGCTACTGGCTCACCATCCTCCACCGA | + |
|
Preference number: 3 (lower is better) Translates to: GPCPSPVAPARV*GVGYWLTILHR Trigger: TCGGTGGAGGATGGTGAGCCAGTAGCCAACTCCTCAGACTCTGGCCGGAGCAACCGGACTAGGGCACGGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 72 bp | TCCGGCACGTGCGCATTGCTTCTGCTACGGAACTTCTaGTCCCGCAGCACCGTTAGCCGCAGCACCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGTCALLLLRNF*SRSTVSRSTWQ Trigger: CTGCCAGGTGCTGCGGCTAACGGTGCTGCGGGAGCAGAAGTTCCGTAGCAGAAGCAATGCGCACGTGCCGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 72 bp | CATCCCGAGGTCCATAGGAGTCCGGCACGTGCGCATTaGTTCTGCTACGGAACTTCTGCTCCCGCAGCACCG | + |
|
Preference number: 3 (lower is better) Translates to: HPEVHRSPARAH*FCYGTSAPAAP Trigger: CGGTGCTGCGGGAGCAGAAGTTCCGTAGCAGAAGCAATGCGCACGTGCCGGACTCCTATGGACCTCGGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTACCAGGCGGGGTCACGTaGTGGTTGGAGTCCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLPGGVT*WLESRA Trigger: AGCCCTGGACTCCAACCACAACGTGACCCCGCCTGG...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 72 bp | GAGGTCCATAGGAGTCCGGCACGTGCGCATTGCTTCTaGTACGGAACTTCTGCTCCCGCAGCACCGTTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EVHRSPARAHCF*YGTSAPAAPLA Trigger: GGCTAACGGTGCTGCGGGAGCAGAAGTTCCGTAGCAGAAGCAATGCGCACGTGCCGGACTCCTATGGACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | GGTGGCTGCAGGCTTAGAAGCTGTGTTCCTCTCTCCTaGGCCTGGGGATTGCTGGCCATTGCTGATCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GGCRLRSCVPLS*AWGLLAIADPA Trigger: GGCTGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGGAGAGAGGAACACAGCTTCTAAGCCTGCAGCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 72 bp | GATGACATAGATGGGCAAGTCCCATTCCCTGTGGGATaGTCCCCCTCCGACGGTCATGCCGAGAGACTCGCT | + |
|
Preference number: 3 (lower is better) Translates to: DDIDGQVPFPVG*SPSDGHAERLA Trigger: AGCGAGTCTCTCGGCATGACCGTCGGAGGGGGAGCATCCCACAGGGAATGGGACTTGCCCATCTATGTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | GTGGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATaGTTGGCAACGACACTCCCGCTCTTCGTCCTCCGG | + |
|
Preference number: 3 (lower is better) Translates to: VVFSELSLPWST*LATTLPLFVLR Trigger: CCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 72 bp | GGGGATTGCTGGCCATTGCTGATCCAGCCAGCTTCTTaGAAGATGTCTGGGCTGGACTGTCGAACCTGGCGG | + |
|
Preference number: 3 (lower is better) Translates to: GDCWPLLIQPAS*KMSGLDCRTWR Trigger: CCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 72 bp | TCCTGTCCTTGGTCAGGCCATAGTGGGAGGCCCCTTTaGAGCTCACAGACTTCTGCCAAGTTCAGGGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SCPWSGHSGRPL*SSQTSAKFRVH Trigger: GTGGACCCTGAACTTGGCAGAAGTCTGTGAGCTGCAAAGGGGCCTCCCACTATGGCCTGACCAAGGACAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 72 bp | AGACTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTaGCCTGGTCAACATGGTTGGCAACGACACTCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: RLRGQWCSQSCP*PGQHGWQRHSR Trigger: GCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | TGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATGGTTaGCAACGACACTCCCGCTCTTCGTCCTCCGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CSQSCPCPGQHG*QRHSRSSSSGE Trigger: CTCTCCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | TCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTaGTCAACATGGTTGGCAACGACACTCCCGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGTVVFSELSLP*STWLATTLPLF Trigger: GAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | GCCATTGCTGATCCAGCCAGCTTCTTGAAAGATGTCTaGGCTGGACTGTCGAACCTGGCGGGACACGACGAG | + |
|
Preference number: 3 (lower is better) Translates to: AIADPASFLKDV*AGLSNLAGHDE Trigger: CTCGTCGTGTCCCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATCAGCAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | TGCAGGCTTAGAAGCTGTGTTCCTCTCTCCTGGGCCTaGGGATTGCTGGCCATTGCTGATCCAGCCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CRLRSCVPLSWA*GLLAIADPASF Trigger: GAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGGAGAGAGGAACACAGCTTCTAAGCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTCGAACCTGGCGGGACACGACGAGATGGACGCGTCTTTCACTGGCCTGAACATTGGAAGAAGATCTaGCATCGCACACCGGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: TVEPGGTRRDGRVFHWPEHWKKI*HRTPDA Trigger: TGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATG...TTCAGGCCAGTGAAAGACGCGTCCATCTCGTCGTGTCCCGCCAGGTTCGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCTGGACTGTCGAACCTGGCGGGACACGACGAGATGGACGCGTCTTTCACTCTGATGTCCATGCCGTaGACCTTGAGAATGATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WAGLSNLAGHDEMDASFTLMSMP*TLRMMS Trigger: AGACATCATTCTCAAGGTCAACGGCATGGACATCAG...AGTGAAAGACGCGTCCATCTCGTCGTGTCCCGCCAGGTTCGACAGTCCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 72 bp | CTCCTGTTCCTTGACTTCCAAGGCTTTGAGTACCACTaGGGAGGGTGCGCTCTTCAGTATGGCAACGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLFLDFQGFEYH*GGCALQYGNGL Trigger: GAGGCCGTTGCCATACTGAAGAGCGCACCCTCCTCAGTGGTACTCAAAGCCTTGGAAGTCAAGGAACAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTACATTGGAAGAAGATCTaGCATCGCACACCGGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLHWKKI*HRTPDA Trigger: TGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATG...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR TCA 72 bp | GGGTTCACCTCCTGTTCTGTCAGAGGCTCCAGACGGTaGCAGAGTACGTGGTGGTTTGGTTCAAACCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GFTSCSVRGSRR*QSTWWFGSNLF Trigger: GAAGAGGTTTGAACCAAACCACCACGTACTCTGTCACCGTCTGGAGCCTCTGACAGAACAGGAGGTGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | ATACCCGATGTACTTCTACCGTTGACAGCGAGAAGAATGTCACCACATCTGATTCGTGCCCTAGTCCGGTaGCTCCGGCCAGAGTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: IPDVLLPLTARRMSPHLIRALVR*LRPESE Trigger: CTCAGACTCTGGCCGGAGCAACCGGACTAGGGCACG...AATCAGATGTGGTGACATTCTTCTCGCTGTCAACGGTAGAAGTACATCGGGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCTGATTCTTCCGTCATaGTATGCAGGTGTTCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: DLASHTGCTHAQGLLTFCLILPS*YAGVPS Trigger: TGAAGGAACACCTGCATACAATGACGGAAGAATCAG...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR TCA 72 bp | TCGCTGGGGTCTTTCCAGACACTTACAACCTTCTCATaGCAGGTGGCTGCAGGCTTAGAAGCTGTGTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLGSFQTLTTFS*QVAAGLEAVFL Trigger: GAGGAACACAGCTTCTAAGCCTGCAGCCACCTGTCATGAGAAGGTTGTAAGTGTCTGGAAAGACCCCAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | AGTATGGCATGTACATGTAAGTGGGACAGACAGTGCTaGCTACAGCCACCGACACGCACCGTTCTGCTTATG | + |
|
Preference number: 3 (lower is better) Translates to: SMACTCKWDRQC*LQPPTRTVLLM Trigger: CATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATGTACATGCCATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | TCAGGTGAAACAACCTTGGGAAGACTTCGGGGACAGTaGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SGETTLGRLRGQ*CSQSCPCPGQH Trigger: ATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCTTCCCAAGGTTGTTTCACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR GCA 72 bp | AGGATCTTAGTGCAGAAATGCATTGGAAGAAGATCTTaGATCGCACACCGGATGCACACACGCACAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RILVQKCIGRRS*IAHRMHTRTGA Trigger: AGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTGTGTTCCTTCGCAGTATCACATCTTTACAGTTACATAAGTACTGTGGTCCCTGGTCAACATGGTaGGCAACGACACTCCCGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PAVFLRSITSLQLHKYCGPWSTW*ATTLPL Trigger: GAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGG...ACCACAGTACTTATGTAACTGTAAAGATGTGATACTGCGAAGGAACACAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTCCCGTCTCTGCTTATGACTCCGCCGGGTTCAACACTGATGACATAGATGCTCGGTTGATCTTCTaGAAAGACCGGCTTCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: YSPVSAYDSAGFNTDDIDARLIF*KDRLLI Trigger: TATGAGAAGCCGGTCTTTCAAGAAGATCAACCGAGC...ATCTATGTCATCAGTGTTGAACCCGGCGGAGTCATAAGCAGAGACGGGAGAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CCA 72 bp | TGTGTCACAGTCAAGGATCTTAGTGCAGAAATGCATTaGAAGAAGATCTTGCATCGCACACCGGATGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: CVTVKDLSAEMH*KKILHRTPDAH Trigger: GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAGATCCTTGACTGTGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR TCA 72 bp | AGTTGTCTAGTTTCCAATGTGGTTGAAATGTACCTCTaGAGTAGCATATTGTCTGTAAAATGTATGTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SCLVSNVVEMYL*SSILSVKCMCH Trigger: GTGACACATACATTTTACAGACAATATGCTACTTCAGAGGTACATTTCAACCACATTGGAAACTAGACAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| 3UTR CAA 72 bp | ACCCAGGATGGGGACCAGTCACCAGGCGGGGTCACGTaGTGGTTGGAGTCCAGGGCTGCTGGGCTGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TQDGDQSPGGVT*WLESRAAGLQS Trigger: AGACTGCAGCCCAGCAGCCCTGGACTCCAACCACAACGTGACCCCGCCTGGTGACTGGTCCCCATCCTGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 72 bp | GCCCTAGTCCGGTTGCTCCGGCCAGAGTCTGAGGAGTaGGCTACTGGCTCACCATCCTCCACCGAGGACACG | + |
|
Preference number: 4 (lower is better) Translates to: ALVRLLRPESEE*ATGSPSSTEDT Trigger: CGTGTCCTCGGTGGAGGATGGTGAGCCAGTAGCCAACTCCTCAGACTCTGGCCGGAGCAACCGGACTAGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR GCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCCCAGCGGCGTCTCGCTaGCCCCCACCAGCCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCPAASR*PPPALW Trigger: CCATAAGGCTGGTGGGGGGCAGCGAGACGCCGCTGG...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAGCGCTCAAAGGGCCGTaGCCTAGTCCGGTTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLALKGP*PSPVAP Trigger: CGGAGCAACCGGACTAGGGCACGGCCCTTTGAGCGC...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCCAGCGGCGTCTCGCTaGCCCCCACCAGCCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFPAASR*PPPALW Trigger: CCATAAGGCTGGTGGGGGGCAGCGAGACGCCGCTGG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCCCAGCGGCGTCTCGCTaGCCCCCACCAGCCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGPAASR*PPPALW Trigger: CCATAAGGCTGGTGGGGGGCAGCGAGACGCCGCTGG...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCGGGTCACGTTGTGGTTaGAGTCCAGGGCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCGSRCG*SPGLLG Trigger: GCCCAGCAGCCCTGGACTCCAACCACAACGTGACCC...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTGCGCTCAAAGGGCCGTaGCCTAGTCCGGTTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFALKGP*PSPVAP Trigger: CGGAGCAACCGGACTAGGGCACGGCCCTTTGAGCGC...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCCGGGACACGACGAGATaGACGCGTCTTTCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCRDTTR*TRLSLA Trigger: GGCCAGTGAAAGACGCGTCCATCTCGTCGTGTCCCG...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCCTCTCTCCTGGGCCTaGGGATTGCTGGCCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLASHTGCTHAQGLLTFCPLSWA*GLLAIA Trigger: AGCAATGGCCAGCAATCCCCAGGCCCAGGAGAGAGG...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCAAGTCCCATTCCCTGTaGGATGCTCCCCCTCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCKSHSL*DAPPPT Trigger: CGTCGGAGGGGGAGCATCCCACAGGGAATGGGACTT...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTACCACATGACCCAGGATaGGGACCAGTCACCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLPHDPG*GPVTRR Trigger: CCGCCTGGTGACTGGTCCCCATCCTGGGTCATGTGG...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTGCTCCGGCCAGAGTCTaGGGAGTTGGCTACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFAPARV*GVGYWL Trigger: GAGCCAGTAGCCAACTCCTCAGACTCTGGCCGGAGC...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCCTGCCCTGGTCAACATaGTTGGCAACGACACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCLPWST*LATTLP Trigger: CGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAG...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCGGGCTGCAGTCTTCCTaGGCCTCCTGTTCCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: DLASHTGCTHAQGLLTFCGLQSS*ASCSLT Trigger: AGTCAAGGAACAGGAGGCCCAGGAAGACTGCAGCCC...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTGGCGGGGTCACGTTGTaGTTGGAGTCCAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFGGVTL*LESRAA Trigger: AGCAGCCCTGGACTCCAACCACAACGTGACCCCGCC...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCCCACATGACCCAGGATaGGGACCAGTCACCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGPHDPG*GPVTRR Trigger: CCGCCTGGTGACTGGTCCCCATCCTGGGTCATGTGG...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGTGTTCCTCTCTCCTaGGCCTGGGGATTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGCVPLS*AWGLLA Trigger: GGCCAGCAATCCCCAGGCCCAGGAGAGAGGAACACA...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTTGTGTTCCTCTCTCCTaGGCCTGGGGATTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFCVPLS*AWGLLA Trigger: GGCCAGCAATCCCCAGGCCCAGGAGAGAGGAACACA...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCAAGTCCCATTCCCTGTaGGATGCTCCCCCTCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGKSHSL*DAPPPT Trigger: CGTCGGAGGGGGAGCATCCCACAGGGAATGGGACTT...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| 3UTR CAA 72 bp | TCAGAGGCTCCAGACGGTGACAGAGTACGTGGTGGTTaGGTTCAAACCTCTTCCCCCACGCTGGTCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEAPDGDRVRGG*VQTSSPTLVSP Trigger: AGGGGAGACCAGCGTGGGGGAAGAGGTTTGAACCAAACCACCACGTACTCTGTCACCGTCTGGAGCCTCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| 3UTR CAA 72 bp | GTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATGGTaGGCAACGACACTCCCGCTCTTCGTCCTCCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFSELSLPWSTW*ATTLPLFVLRR Trigger: TCTCCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTTCCCGTCTCTGCTTATaGCTCCGCCGGGTTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFSRLCL*LRRVQH Trigger: GTGTTGAACCCGGCGGAGTCATAAGCAGAGACGGGA...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGGCGCTCAAAGGGCCGTaGCCTAGTCCGGTTGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTALKGP*PSPVAP Trigger: CGGAGCAACCGGACTAGGGCACGGCCCTTTGAGCGC...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCGGCTGCAGAAACCTCTaGGGAGAGCGTCGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGGCRNL*GERRCH Trigger: ATGGCAACGACGCTCTCCCCAGAGGTTTCTGCAGCC...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCCTGGTCAACATaGTTGGCAACGACACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFLPWST*LATTLP Trigger: CGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCAGACTTCGGGGACAGTaGTGTTCTCAGAGTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCRLRGQ*CSQSCP Trigger: GGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTGAAAGATGTCTGGGCTaGACTGTCGAACCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFERCLG*TVEPGG Trigger: CCCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTC...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCGAAAGATGTCTGGGCTaGACTGTCGAACCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGERCLG*TVEPGG Trigger: CCCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTC...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTGGGCTGCAGTCTTCCTaGGCCTCCTGTTCCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFGLQSS*ASCSLT Trigger: AGTCAAGGAACAGGAGGCCCAGGAAGACTGCAGCCC...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCGGGGTCACGTTGTaGTTGGAGTCCAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRGGVTL*LESRAA Trigger: AGCAGCCCTGGACTCCAACCACAACGTGACCCCGCC...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACCCACATGACCCAGGATaGGGACCAGTCACCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AEMHWKKILHRTPDAHTHPHDPG*GPVTRR Trigger: CCGCCTGGTGACTGGTCCCCATCCTGGGTCATGTGG...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| 3UTR CAA 72 bp | TGGGGATTGCTGGCCATTGCTGATCCAGCCAGCTTCTaGAAAGATGTCTGGGCTGGACTGTCGAACCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WGLLAIADPASF*KDVWAGLSNLA Trigger: CGCCAGGTTCGACAGTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR GCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTCCGAGTACAGGAAGTaGAGGTTGCCCACATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCSEYRK*RLPTLS Trigger: TGACAATGTGGGCAACCTGCACTTCCTGTACTCGGA...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039744.13 ENSMUST00000127396.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTCGAACCTGGCGGGACACGACGAGATGGACGCGTCTTTCACTGGCCTGAATCCGAGTACAGGAAGTaGAGGTTGCCCACATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVEPGGTRRDGRVFHWPESEYRK*RLPTLS Trigger: TGACAATGTGGGCAACCTGCACTTCCTGTACTCGGA...TTCAGGCCAGTGAAAGACGCGTCCATCTCGTCGTGTCCCGCCAGGTTCGACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAAGCTTTATGCCAAGCTaGTCCTCGGGGCTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLSFMPS*SSGLLL Trigger: CAAAAGCAGCCCCGAGGAGCAGCTTGGCATAAAGCT...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTCCTGGTCAACATGGTTaGCAACGACACTCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFPGQHG*QRHSRS Trigger: AGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGG...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCGAGTTGTCCCTGCCCTaGTCAACATGGTTGGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGELSLP*STWLAT Trigger: CGTTGCCAACCATGTTGACCAGGGCAGGGACAACTC...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAAGACTTCGGGGACAGTaGTGTTCTCAGAGTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLRLRGQ*CSQSCP Trigger: GGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGCTGGACTGTCGAACCTaGCGGGACACGACGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRLDCRT*RDTTRW Trigger: CCATCTCGTCGTGTCCCGCCAGGTTCGACAGTCCAG...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGAAGTCCCATTCCCTGTaGGATGCTCCCCCTCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRKSHSL*DAPPPT Trigger: CGTCGGAGGGGGAGCATCCCACAGGGAATGGGACTT...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTACAGAGGCTCGGGACTaGGATCTGGGTCATCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFTEARD*DLGHLQ Trigger: TTGCAGATGACCCAGATCCCAGTCCCGAGCCTCTGT...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| 3UTR CAA 72 bp | CTTGGGAAGACTTCGGGGACAGTGGTGTTCTCAGAGTaGTCCCTGCCCTGGTCAACATGGTTGGCAACGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGKTSGTVVFSE*SLPWSTWLATT Trigger: TGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCTTCCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTACGGGGCTGCTTTTGTTaGGGATTACATGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLRGCFC*GLHGSC Trigger: ACAGCTTCCATGTAATCCTCAACAAAAGCAGCCCCG...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTATCCAGCCAGCTTCTTaGAAGATGTCTGGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFIQPAS*KMSGLD Trigger: GTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGAT...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTATCCAGCCAGCTTCTTaGAAGATGTCTGGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFIQPAS*KMSGLD Trigger: GTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGAT...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCCTGAATCAGATGAGCTaGACTCTCTGGACTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCLNQMS*TLWTAK Trigger: TTTGGCAGTCCAGAGAGTGCAGCTCATCTGATTCAG...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCTGAATCAGATGAGCTaGACTCTCTGGACTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLASHTGCTHAQGLLTFCLNQMS*TLWTAK Trigger: TTTGGCAGTCCAGAGAGTGCAGCTCATCTGATTCAG...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAGGGTCCAGCAATGCTTaGAGACAGATGTGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLGSSNA*RQMWHM Trigger: CATATGCCACATCTGTCTGCAAGCATTGCTGGACCC...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCAGAGGGTCCAGCAATaGTTGCAGACAGATGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFQRVQQ*LQTDVA Trigger: TGCCACATCTGTCTGCAAGCATTGCTGGACCCTCTG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR CCA 90 bp | AGACTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATGGTGTCAATGTAGTTAGCTaGACTCAGCCAGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLRGQWCSQSCPCPGQHGVNVVS*TQPGQD Trigger: GTCCTGCCCTGGCTGAGTCCAGCTAACTACATTGAC...ACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCAGAAACCTCTaGGGAGAGCGTCGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRGCRNL*GERRCH Trigger: ATGGCAACGACGCTCTCCCCAGAGGTTTCTGCAGCC...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCGGGACACGACGAGATaGACGCGTCTTTCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTRDTTR*TRLSLA Trigger: GGCCAGTGAAAGACGCGTCCATCTCGTCGTGTCCCG...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGAAAGATGTCTGGGCTaGACTGTCGAACCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRERCLG*TVEPGG Trigger: CCCGCCAGGTTCGACAGTCCAGCCCAGACATCTTTC...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGTGTGTTCCTCTCTCCTaGGCCTGGGGATTGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTCVPLS*AWGLLA Trigger: GGCCAGCAATCCCCAGGCCCAGGAGAGAGGAACACA...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTTGCCGAGAGACTCGCTaGGGTCTTTCCAGACACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFCRETR*GLSRHL Trigger: TAAGTGTCTGGAAAGACCCCAGCGAGTCTCTCGGCA...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTTGCCGAGAGACTCGCTaGGGTCTTTCCAGACACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFCRETR*GLSRHL Trigger: TAAGTGTCTGGAAAGACCCCAGCGAGTCTCTCGGCA...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACGGGTCACGTTGTGGTTaGAGTCCAGGGCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHGSRCG*SPGLLG Trigger: GCCCAGCAGCCCTGGACTCCAACCACAACGTGACCC...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACGGCGGGGTCACGTTGTaGTTGGAGTCCAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHGGVTL*LESRAA Trigger: AGCAGCCCTGGACTCCAACCACAACGTGACCCCGCC...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCCTTACAACCTTCTCATaGCAGGTGGCTGCAGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGLTTFS*QVAAGL Trigger: TAAGCCTGCAGCCACCTGTCATGAGAAGGTTGTAAG...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGTCCCGTCTCTGCTTATaGCTCCGCCGGGTTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTSRLCL*LRRVQH Trigger: GTGTTGAACCCGGCGGAGTCATAAGCAGAGACGGGA...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCACAGGAAGTGCAGGTTaGCCACATTGTCAATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCTGSAG*PHCQCS Trigger: ACTACATTGACAATGTGGGCAACCTGCACTTCCTGT...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039744.13 ENSMUST00000127396.8 |
||
| CDS-3UTR GCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGAGTGGGAGGCCCCTTTaGAGAGTTCCGAGTACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRSGRPL*RVPSTG Trigger: TCCTGTACTCGGAACTCTGCAAAGGGGCCTCCCACT...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039744.13 |
||
| CDS-3UTR GCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTTCTGGGGAGTGGTTTTaGCCACACACTATGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFSGEWF*PHTMHR Trigger: TCTGTGCATAGTGTGTGGGCAAAACCACTCCCCAGA...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAGATTTCTTGCAGTGCTaGAGAACCACAGGCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLDFLQC*RTTGFR Trigger: TCGAAAGCCTGTGGTTCTGCAGCACTGCAAGAAATC...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR CCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTCAGGTGAAACAACCTTaGGAAGACTTCGGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFQVKQP*EDFGDS Trigger: ACTGTCCCCGAAGTCTTCCCAAGGTTGTTTCACCTG...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCAGGTGAAACAACCTTaGGAAGACTTCGGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFQVKQP*EDFGDS Trigger: ACTGTCCCCGAAGTCTTCCCAAGGTTGTTTCACCTG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACCTGGACTGTCGAACCTaGCGGGACACGACGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHLDCRT*RDTTRW Trigger: CCATCTCGTCGTGTCCCGCCAGGTTCGACAGTCCAG...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACCCTCTCTCCTGGGCCTaGGGATTGCTGGCCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHPLSWA*GLLAIA Trigger: AGCAATGGCCAGCAATCCCCAGGCCCAGGAGAGAGG...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCCCATCTGGAATCAGGTaGAACAACCTTGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGPSGIR*NNLGKT Trigger: AGTCTTCCCAAGGTTGTTTCACCTGATTCCAGATGG...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAATGTACTTCTACCGTTaGCAGCGAGAAGAATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLMYFYR*QREECH Trigger: GTGACATTCTTCTCGCTGTCAACGGTAGAAGTACAT...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGAGCTTTATGCCAAGCTaGTCCTCGGGGCTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRSFMPS*SSGLLL Trigger: CAAAAGCAGCCCCGAGGAGCAGCTTGGCATAAAGCT...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGCTTTATGCCAAGCTaGTCCTCGGGGCTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEMHWKKILHRTPDAHTHSFMPS*SSGLLL Trigger: CAAAAGCAGCCCCGAGGAGCAGCTTGGCATAAAGCT...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGAATCAGATGAGCTaGACTCTCTGGACTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFLNQMS*TLWTAK Trigger: TTTGGCAGTCCAGAGAGTGCAGCTCATCTGATTCAG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACGTCAATGTAGTTAGCTaGACTCAGCCAGGGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AEMHWKKILHRTPDAHTHVNVVS*TQPGQD Trigger: GTCCTGCCCTGGCTGAGTCCAGCTAACTACATTGAC...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039744.13 ENSMUST00000127396.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACCTGCCCTGGTCAACATaGTTGGCAACGACACTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHLPWST*LATTLP Trigger: CGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAG...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | TCATCCACCCGGCGCACCAGCTTTATGCCAAGCTGCTCCTCGGGGCTGCTTTTGGTCTCATTCTTTTCATaGCCAGGAAAGGCTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTRRTSFMPSCSSGLLLVSFFS*PGKAKQ Trigger: TTGTTTAGCCTTTCCTGGCCATGAAAAGAATGAGAC...CAAAAGCAGCCCCGAGGAGCAGCTTGGCATAAAGCTGGTGCGCCGGGTGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACCTTACAACCTTCTCATaGCAGGTGGCTGCAGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AEMHWKKILHRTPDAHTHLTTFS*QVAAGL Trigger: TAAGCCTGCAGCCACCTGTCATGAGAAGGTTGTAAG...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTATGTACTTCTACCGTTaGCAGCGAGAAGAATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LATATDTHRSAYVQGQEFMYFYR*QREECH Trigger: GTGACATTCTTCTCGCTGTCAACGGTAGAAGTACAT...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | AGACTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTGGTCAACATGGTACAGGAAGTGCAGGTTaGCCACATTGTCAATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLRGQWCSQSCPCPGQHGTGSAG*PHCQCS Trigger: ACTACATTGACAATGTGGGCAACCTGCACTTCCTGT...ACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR GCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCAGATACTGGATTTCTTaGAGTGCTGCAGAACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGRYWIS*SAAEPQ Trigger: CTGTGGTTCTGCAGCACTGCAAGAAATCCAGTATCT...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACGAGTTGTCCCTGCCCTaGTCAACATGGTTGGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHELSLP*STWLAT Trigger: CGTTGCCAACCATGTTGACCAGGGCAGGGACAACTC...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGAGACTTCGGGGACAGTaGTGTTCTCAGAGTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTRLRGQ*CSQSCP Trigger: GGGACAACTCTGAGAACACCACTGTCCCCGAAGTCT...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTTGTTGAGGATTACATaGAAGCTGTCATCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGLLRIT*KLSSRG Trigger: ACCTCGGGATGACAGCTTCCATGTAATCCTCAACAA...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| 3UTR CAA 72 bp | AAGGATCTTAGTGCAGAAATGCATTGGAAGAAGATCTaGCATCGCACACCGGATGCACACACGCACAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDLSAEMHWKKI*HRTPDAHTHRG Trigger: GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAGATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 ENSMUST00000127396.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGCCATCTGGAATCAGGTaGAACAACCTTGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: EMHWKKILHRTPDAHTHRPSGIR*NNLGKT Trigger: AGTCTTCCCAAGGTTGTTTCACCTGATTCCAGATGG...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCGAATGTCACCACATCTaGTTCTTCCGTCATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: MHWKKILHRTPDAHTHRGECHHI*FFRHCM Trigger: CATACAATGACGGAAGAATCAGATGTGGTGACATTC...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCAGGTGAAACAACCTTaGGAAGACTTCGGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTQVKQP*EDFGDS Trigger: ACTGTCCCCGAAGTCTTCCCAAGGTTGTTTCACCTG...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACCGGGGCTGCTTTTGTTaGGGATTACATGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHRGCFC*GLHGSC Trigger: ACAGCTTCCATGTAATCCTCAACAAAAGCAGCCCCG...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGGACAGATGTGGCATATaGGGTCGTCATCTACATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTDRCGI*GRHLHP Trigger: AGGATGTAGATGACGACCTCATATGCCACATCTGTC...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTTCTTCCGTCATTGTATaGAGGTGTTCCTTCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RRSCIAHRMHTRTGAADFSSVIV*RCSFNN Trigger: ATTGTTGAAGGAACACCTGCATACAATGACGGAAGA...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACGAATGTCACCACATCTaGTTCTTCCGTCATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: AEMHWKKILHRTPDAHTHECHHI*FFRHCM Trigger: CATACAATGACGGAAGAATCAGATGTGGTGACATTC...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACCTGGATTTCTTGCAGTaGTGCAGAACCACAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHLDFLQ*CRTTGF Trigger: AAAGCCTGTGGTTCTGCAGCACTGCAAGAAATCCAG...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR TCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAAGCTCCGGCCAGAGTCTaGGGAGTTGGCTACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKAPARV*GVGYWL Trigger: GAGCCAGTAGCCAACTCCTCAGACTCTGGCCGGAGC...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACTCTTCCGTCATTGTATaGAGGTGTTCCTTCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: AEMHWKKILHRTPDAHTHSSVIV*RCSFNN Trigger: ATTGTTGAAGGAACACCTGCATACAATGACGGAAGA...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACTTGTTGAGGATTACATaGAAGCTGTCATCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSAEMHWKKILHRTPDAHLLRIT*KLSSRG Trigger: ACCTCGGGATGACAGCTTCCATGTAATCCTCAACAA...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGTCTTCCGTCATTGTATaGAGGTGTTCCTTCAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SAEMHWKKILHRTPDAHTSSVIV*RCSFNN Trigger: ATTGTTGAAGGAACACCTGCATACAATGACGGAAGA...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAACTGGACTGTCGAACCTaGCGGGACACGACGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKLDCRT*RDTTRW Trigger: CCATCTCGTCGTGTCCCGCCAGGTTCGACAGTCCAG...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| 3UTR CAA 72 bp | AGGCAAGCGTGTATCATACCCGATGTACTTCTACCGTaGACAGCGAGAAGAATGTCACCACATCTGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQACIIPDVLLP*TARRMSPHLIL Trigger: AAGAATCAGATGTGGTGACATTCTTCTCGCTGTCAACGGTAGAAGTACATCGGGTATGATACACGCTTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR CCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAAGGGCTGCAGTCTTCCTaGGCCTCCTGTTCCTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKGLQSS*ASCSLT Trigger: AGTCAAGGAACAGGAGGCCCAGGAAGACTGCAGCCC...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAAGAGTTGTCCCTGCCCTaGTCAACATGGTTGGCAACG | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKELSLP*STWLAT Trigger: CGTTGCCAACCATGTTGACCAGGGCAGGGACAACTC...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAAGTAGGTGTGTCCACATaGAGTGTCCAGAGGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKVGVST*SVQRVQ Trigger: CTGGACCCTCTGGACACTCCATGTGGACACACCTAC...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| 3UTR CAA 72 bp | GCGAGAAGAATGTCACCACATCTGATTCTTCCGTCATaGTATGCAGGTGTTCCTTCAACAATGGACTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: ARRMSPHLILPS*YAGVPSTMDLI Trigger: TATCAAGTCCATTGTTGAAGGAACACCTGCATACAATGACGGAAGAATCAGATGTGGTGACATTCTTCTCGC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127396.8 |
||
| CDS-3UTR TCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAAATCCAGCCAGCTTCTTaGAAGATGTCTGGGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKIQPAS*KMSGLD Trigger: GTCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGAT...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAATGCCGAGAGACTCGCTaGGGTCTTTCCAGACACTTA | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKCRETR*GLSRHL Trigger: TAAGTGTCTGGAAAGACCCCAGCGAGTCTCTCGGCA...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAACGGGGCTGCTTTTGTTaGGGATTACATGGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKRGCFC*GLHGSC Trigger: ACAGCTTCCATGTAATCCTCAACAAAAGCAGCCCCG...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAACCATCTGGAATCAGGTaGAACAACCTTGGGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKPSGIR*NNLGKT Trigger: AGTCTTCCCAAGGTTGTTTCACCTGATTCCAGATGG...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAAATGTACTTCTACCGTTaGCAGCGAGAAGAATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKMYFYR*QREECH Trigger: GTGACATTCTTCTCGCTGTCAACGGTAGAAGTACAT...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAATTGTTGAGGATTACATaGAAGCTGTCATCCCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKLLRIT*KLSSRG Trigger: ACCTCGGGATGACAGCTTCCATGTAATCCTCAACAA...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR TCA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAAGAATGTCACCACATCTaGTTCTTCCGTCATTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: HFESCSEPEIVLFPKIHKECHHI*FFRHCM Trigger: CATACAATGACGGAAGAATCAGATGTGGTGACATTC...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCCGTGCCCTAGTCCGGTaGCTCCGGCCAGAGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCRALVR*LRPESE Trigger: CTCAGACTCTGGCCGGAGCAACCGGACTAGGGCACG...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTACGTGCCCTAGTCCGGTaGCTCCGGCCAGAGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLRALVR*LRPESE Trigger: CTCAGACTCTGGCCGGAGCAACCGGACTAGGGCACG...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCCGAAGGTCATGCCCGTaGATGGCCAGCACACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCRRSCP*MASTRS Trigger: TGACCGTGTGCTGGCCATCAACGGGCATGACCTTCG...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCCGAAGGTCATGCCCGTaGATGGCCAGCACACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLASHTGCTHAQGLLTFCRRSCP*MASTRS Trigger: TGACCGTGTGCTGGCCATCAACGGGCATGACCTTCG...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTCCTGGGCCTGGGGATaGCTGGCCATTGCTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCSWAWG*LAIADP Trigger: TGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGGA...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCCCAGGCGGGGTCACGTaGTGGTTGGAGTCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MHWKKILHRTPDAHTHRGPGGVT*WLESRA Trigger: AGCCCTGGACTCCAACCACAACGTGACCCCGCCTGG...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS CCA 90 bp | TCACCATCTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTGCCCTaGTCAACATGGTTGGCAACGACACTCCCGCTCTTCGTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSGTVVFSELSLP*STWLATTLPLFVLR Trigger: CCGGAGGACGAAGAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGATGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121690.8 |
||
| CDS-3UTR CAA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCCGAAGGTCATGCCCGTaGATGGCCAGCACACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MHWKKILHRTPDAHTHRGRRSCP*MASTRS Trigger: TGACCGTGTGCTGGCCATCAACGGGCATGACCTTCG...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTTCCTGGGCCTGGGGATaGCTGGCCATTGCTGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LATATDTHRSAYVQGQEFSWAWG*LAIADP Trigger: TGGATCAGCAATGGCCAGCAATCCCCAGGCCCAGGA...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGCCAGGCGGGGTCACGTaGTGGTTGGAGTCCAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: EMHWKKILHRTPDAHTHRPGGVT*WLESRA Trigger: AGCCCTGGACTCCAACCACAACGTGACCCCGCCTGG...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS CCA 90 bp | CGCAACCATCAGGACAGCCATCTTGAGAGCGCCTTTTCCTGTCCTTaGTCAGGCCATAGTGGGAGGCCCCTTTGCAGAGTTCCGAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: RNHQDSHLESAFSCP*SGHSGRPLCRVPST Trigger: TGTACTCGGAACTCTGCAAAGGGGCCTCCCACTATGGCCTGACCAAGGACAGGAAAAGGCGCTCTCAAGATGGCTGTCCTGATGGTTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000117525.8 ENSMUST00000121690.8 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTCAGGTGAAACAACCTaGGGAAGACTTCGGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCSGETT*GRLRGQ Trigger: CTGTCCCCGAAGTCTTCCCAAGGTTGTTTCACCTGA...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTCCATGCCGTTGACCTaGAGAATGATGTCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCSMPLT*RMMSPG Trigger: GCCAGGAGACATCATTCTCAAGGTCAACGGCATGGA...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCCCCCATTTAGCACGTaGAAGATGAACACGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RRSCIAHRMHTRTGAADFPPFST*KMNTPG Trigger: GCCCGGCGTGTTCATCTTCAACGTGCTAAATGGGGG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS TCA 90 bp | GCTTTCGATCCACAGGGCAGAAGTCCTTCTCCACCAGGAAGTTGGTaGGACACAGGGTGCAGTAGGTGTGTCCACATGGAGTGTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AFDPQGRSPSPPGSW*DTGCSRCVHMECPE Trigger: CTCTGGACACTCCATGTGGACACACCTACTGCACCCTGTGTCTCACCAACTTCCTGGTGGAGAAGGACTTCTGCCCTGTGGATCGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS GCA 90 bp | AGCGCCTTTTCCTGTCCTTGGTCAGGCCATAGTGGGAGGCCCCTTTaGAGCTTGTCTGGAAATGATGCTGGAGATCACAGCGCTGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAFSCPWSGHSGRPL*SLSGNDAGDHSAVA Trigger: TGCTACAGCGCTGTGATCTCCAGCATCATTTCCAGACAAGCTGCAAAGGGGCCTCCCACTATGGCCTGACCAAGGACAGGAAAAGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CCA 90 bp | CACCAGGAAGTTGGTGAGACACAGGGTGCAGTAGGTGTGTCCACATaGAGTGTCCAGAGGGTCCAGCAATGCTTGCAGACAGATGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HQEVGETQGAVGVST*SVQRVQQCLQTDVA Trigger: TGCCACATCTGTCTGCAAGCATTGCTGGACCCTCTGGACACTCCATGTGGACACACCTACTGCACCCTGTGTCTCACCAACTTCCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CCA 90 bp | CGCAACCATCAGGACAGCCATCTTGAGAGCGCCTTTTCCTGTCCTTaGTCAGGCCATAGTGGGAGGCCCCTTTGCAGCTTGTCTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RNHQDSHLESAFSCP*SGHSGRPLCSLSGN Trigger: ATTTCCAGACAAGCTGCAAAGGGGCCTCCCACTATGGCCTGACCAAGGACAGGAAAAGGCGCTCTCAAGATGGCTGTCCTGATGGTTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACCGTGCCCTAGTCCGGTaGCTCCGGCCAGAGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHRALVR*LRPESE Trigger: CTCAGACTCTGGCCGGAGCAACCGGACTAGGGCACG...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTGACTTCCAAGGCTTaGAGTACCACTGAGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCLTSKA*STTEEG Trigger: ACCCTCCTCAGTGGTACTCAAAGCCTTGGAAGTCAA...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGCTTGACTTCCAAGGCTTaGAGTACCACTGAGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DLASHTGCTHAQGLLTFCLTSKA*STTEEG Trigger: ACCCTCCTCAGTGGTACTCAAAGCCTTGGAAGTCAA...GCAGAAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTACTCCCTTTAAGTTCCTaGAGCATCCTGGCCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLLPLSS*SILARQ Trigger: TTGCCTGGCCAGGATGCTCAAGGAACTTAAAGGGAG...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTTTCTCCACCAGGAAGTaGGTGAGACACAGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LATATDTHRSAYVQGQEFFSTRK*VRHRVQ Trigger: CTGCACCCTGTGTCTCACCAACTTCCTGGTGGAGAA...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCCCTGGTCAACATGGTaGGCAACGACACTCCCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAEMHWKKILHRTPDAHTPWSTW*ATTLPL Trigger: GAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGG...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTCAGGTGAAACAACCTaGGGAAGACTTCGGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: MHWKKILHRTPDAHTHRGSGETT*GRLRGQ Trigger: CTGTCCCCGAAGTCTTCCCAAGGTTGTTTCACCTGA...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGCCCCCATTTAGCACGTaGAAGATGAACACGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EMHWKKILHRTPDAHTHRPPFST*KMNTPG Trigger: GCCCGGCGTGTTCATCTTCAACGTGCTAAATGGGGG...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACGGGGATTGCTGGCCATaGCTGATCCAGCCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEMHWKKILHRTPDAHTHGDCWP*LIQPAS Trigger: AGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCC...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTATTGACTTCCAAGGCTTaGAGTACCACTGAGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLLTSKA*STTEEG Trigger: ACCCTCCTCAGTGGTACTCAAAGCCTTGGAAGTCAA...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTTGGGCCTCCTGTTCCTaGACTTCCAAGGCTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRSCIAHRMHTRTGAADFWASCS*TSKALS Trigger: ACTCAAAGCCTTGGAAGTCAAGGAACAGGAGGCCCA...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTAGGCCCCTTTGCAGCTaGTCTGGAAATGATGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSCIAHRMHTRTGAADFRPLCS*SGNDAG Trigger: TCCAGCATCATTTCCAGACAAGCTGCAAAGGGGCCT...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS GCA 90 bp | GGTGCAGTAGGTGTGTCCACATGGAGTGTCCAGAGGGTCCAGCAATaGTTGCAGACAGATGTGGCATATGAGGTCGTCATCTACATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAVGVSTWSVQRVQQ*LQTDVAYEVVIYIL Trigger: GAGGATGTAGATGACGACCTCATATGCCACATCTGTCTGCAAGCATTGCTGGACCCTCTGGACACTCCATGTGGACACACCTACTGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCTTAGCTCGGTTGATCTTCTaGAAAGACCGGCTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: VSGTDSAGYSHRHAPFCLARLIF*KDRLLI Trigger: TATGAGAAGCCGGTCTTTCAAGAAGATCAACCGAGC...TAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCGATGTACTTCTACCGTaGACAGCGAGAAGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCDVLLP*TARRMS Trigger: TGACATTCTTCTCGCTGTCAACGGTAGAAGTACATC...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATGTAAGTGGGACAGACAGTGCTGGCTACAGCCACCGACACGCACCGTTCTGCAAGATACTGGATTTCTaGCAGTGCTGCAGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: HVSGTDSAGYSHRHAPFCKILDF*QCCRTT Trigger: TGTGGTTCTGCAGCACTGCAAGAAATCCAGTATCTT...GCAGAACGGTGCGTGTCGGTGGCTGTAGCCAGCACTGTCTGTCCCACTTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS CCA 90 bp | GTCGTCATCTACATCCTCTGTGTACGTGTAGAAGTGGTTTTCCTCTaGGGAGTGGTTTTGCCCACACACTATGCACAGAGGCTCGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: VVIYILCVRVEVVFL*GVVLPTHYAQRLGT Trigger: AGTCCCGAGCCTCTGTGCATAGTGTGTGGGCAAAACCACTCCCCAGAGGAAAACCACTTCTACACGTACACAGAGGATGTAGATGACGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS-3UTR CAA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCGCTCGGTTGATCTTCTaGAAAGACCGGCTTCTCATA | + |
|
Preference number: 5 (lower is better) Translates to: MHWKKILHRTPDAHTHRGARLIF*KDRLLI Trigger: TATGAGAAGCCGGTCTTTCAAGAAGATCAACCGAGC...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACTCAGGTGAAACAACCTaGGGAAGACTTCGGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: AEMHWKKILHRTPDAHTHSGETT*GRLRGQ Trigger: CTGTCCCCGAAGTCTTCCCAAGGTTGTTTCACCTGA...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTACAGCCACCGACACGCACCGTTCTGCTTATGTTCAAGGGCAGGAGTTTCTGATGTCCATGCCGTaGACCTTGAGAATGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LATATDTHRSAYVQGQEFLMSMP*TLRMMS Trigger: AGACATCATTCTCAAGGTCAACGGCATGGACATCAG...AAACTCCTGCCCTTGAACATAAGCAGAACGGTGCGTGTCGGTGGCTGTAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGATCCAGCCAGCTTCTaGAAAGATGTCTGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EMHWKKILHRTPDAHTHRDPASF*KDVWAG Trigger: TCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATC...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACGGGGATTGCTGGCCATaGCTGATCCAGCCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHGDCWP*LIQPAS Trigger: AGAAGCTGGCTGGATCAGCAATGGCCAGCAATCCCC...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGCTCCCTTTAAGTTCCTaGAGCATCCTGGCCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EMHWKKILHRTPDAHTHRLPLSS*SILARQ Trigger: TTGCCTGGCCAGGATGCTCAAGGAACTTAAAGGGAG...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGTCCATGCCGTTGACCTaGAGAATGATGTCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAEMHWKKILHRTPDAHTSMPLT*RMMSPG Trigger: GCCAGGAGACATCATTCTCAAGGTCAACGGCATGGA...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGGATCCAGCCAGCTTCTaGAAAGATGTCTGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAEMHWKKILHRTPDAHTDPASF*KDVWAG Trigger: TCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATC...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGATTCTTCCGTCATaGTATGCAGGTGTTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSCIAHRMHTRTGAADFLILPS*YAGVPS Trigger: TGAAGGAACACCTGCATACAATGACGGAAGAATCAG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCTCCCTTTAAGTTCCTaGAGCATCCTGGCCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SAEMHWKKILHRTPDAHTLPLSS*SILARQ Trigger: TTGCCTGGCCAGGATGCTCAAGGAACTTAAAGGGAG...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTGCTGACTTTCTGGGATCCGCTCTGTaGATTTTGATGCTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: RRSCIAHRMHTRTGAADFLGSAL*ILMLVI Trigger: AATTACAAGCATCAAAATCAACAGAGCGGATCCCAG...AAAGTCAGCAGCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGCTGATGTCCATGCCGTaGACCTTGAGAATGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: EMHWKKILHRTPDAHTHRLMSMP*TLRMMS Trigger: AGACATCATTCTCAAGGTCAACGGCATGGACATCAG...CCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACCTGATGTCCATGCCGTaGACCTTGAGAATGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEMHWKKILHRTPDAHTHLMSMP*TLRMMS Trigger: AGACATCATTCTCAAGGTCAACGGCATGGACATCAG...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACGATCCAGCCAGCTTCTaGAAAGATGTCTGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHDPASF*KDVWAG Trigger: TCCAGCCCAGACATCTTTCAAGAAGCTGGCTGGATC...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACTGGGCCTCCTGTTCCTaGACTTCCAAGGCTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHWASCS*TSKALS Trigger: ACTCAAAGCCTTGGAAGTCAAGGAACAGGAGGCCCA...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACTCCTCGGGGCTGCTTTaGTTGAGGATTACATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHSSGLL*LRITWK Trigger: CTTCCATGTAATCCTCAACAAAAGCAGCCCCGAGGA...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACGATGTACTTCTACCGTaGACAGCGAGAAGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AEMHWKKILHRTPDAHTHDVLLP*TARRMS Trigger: TGACATTCTTCTCGCTGTCAACGGTAGAAGTACATC...GTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACAGGGTCCAGCAATGCTaGCAGACAGATGTGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHRVQQC*QTDVAY Trigger: ATATGCCACATCTGTCTGCAAGCATTGCTGGACCCT...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS GCA 90 bp | AGCTTATTGAGAAGCTTGTTGACCAAGATACTGGATTTCTTGCAGTaGTGCAGAACCACAGGCTTTCGATCCACAGGGCAGAAGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLRSLLTKILDFLQ*CRTTGFRSTGQKSF Trigger: GAAGGACTTCTGCCCTGTGGATCGAAAGCCTGTGGTTCTGCAGCACTGCAAGAAATCCAGTATCTTGGTCAACAAGCTTCTCAATAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCTGATTCTTCCGTCATaGTATGCAGGTGTTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAEMHWKKILHRTPDAHTLILPS*YAGVPS Trigger: TGAAGGAACACCTGCATACAATGACGGAAGAATCAG...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | ATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCACAGGGGCTTATTGAGAAGCTTGTaGACCAAGATACTGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: MHWKKILHRTPDAHTHRGLLRSL*TKILDF Trigger: GAAATCCAGTATCTTGGTCAACAAGCTTCTCAATAA...GCCCCTGTGCGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACACGCTGGGATCCGCTCTGTaGATTTTGATGCTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: SAEMHWKKILHRTPDAHTLGSAL*ILMLVI Trigger: AATTACAAGCATCAAAATCAACAGAGCGGATCCCAG...CGTGTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACGATGTACTTCTACCGTaGACAGCGAGAAGAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHDVLLP*TARRMS Trigger: TGACATTCTTCTCGCTGTCAACGGTAGAAGTACATC...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAACCCCCATTTAGCACGTaGAAGATGAACACGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HFESCSEPEIVLFPKIHKPPFST*KMNTPG Trigger: GCCCGGCGTGTTCATCTTCAACGTGCTAAATGGGGG...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGCAGAAATGCATTGGAAGAAGATCTTGCATCGCACACCGGATGCACACAGCTTATTGAGAAGCTaGTTGACCAAGATACTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSAEMHWKKILHRTPDAHSLLRS*LTKILD Trigger: ATCCAGTATCTTGGTCAACAAGCTTCTCAATAAGCT...GTGTGCATCCGGTGTGCGATGCAAGATCTTCTTCCAATGCATTTCTGCACTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087161.10 |
||
| CDS-3UTR CAA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAATCCATGCCGTTGACCTaGAGAATGATGTCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HFESCSEPEIVLFPKIHKSMPLT*RMMSPG Trigger: GCCAGGAGACATCATTCTCAAGGTCAACGGCATGGA...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAATGGGCCTCCTGTTCCTaGACTTCCAAGGCTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFESCSEPEIVLFPKIHKWASCS*TSKALS Trigger: ACTCAAAGCCTTGGAAGTCAAGGAACAGGAGGCCCA...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS-3UTR CAA 90 bp | CATTTTGAGTCCTGTTCTGAGCCAGAAATAGTGCTGTTTCCTAAAATACATAAACTGATTCTTCCGTCATaGTATGCAGGTGTTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HFESCSEPEIVLFPKIHKLILPS*YAGVPS Trigger: TGAAGGAACACCTGCATACAATGACGGAAGAATCAG...TTTATGTATTTTAGGAAACAGCACTATTTCTGGCTCAGAACAGGACTCAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039744.13 ENSMUST00000087161.10 ENSMUST00000113531.9 |
||
| CDS GCA 72 bp | CATCTTCGGGGACAGTGGTGTTCTCAGAGTTGTCCCTaGCCTGGTCAACATGGTTGGCAACGACACTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HLRGQWCSQSCP*PGQHGWQRHSR Trigger: GCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121690.8 |
||
| CDS GCA 72 bp | TGCTGGAGATCACAGCGCTGTAGCACCTCAGTGCAGTaGTCCGTGAACGGGCAGGTGACCAACAGCTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: CWRSQRCSTSVQ*SVNGQVTNSLL Trigger: CAATAAGCTGTTGGTCACCTGCCCGTTCACGGAGCACTGCACTGAGGTGCTACAGCGCTGTGATCTCCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CCA 72 bp | GGTTTTGCCCACACACTATGCACAGAGGCTCGGGACTaGGATCTGGGTCATCTGCAAGGTCCGGTTGGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GFAHTLCTEARD*DLGHLQGPVGS Trigger: TGAACCAACCGGACCTTGCAGATGACCCAGATCCCAGTCCCGAGCCTCTGTGCATAGTGTGTGGGCAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS GCA 72 bp | TCCTGTCCTTGGTCAGGCCATAGTGGGAGGCCCCTTTaGAGCTTGTCTGGAAATGATGCTGGAGATCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCPWSGHSGRPL*SLSGNDAGDHS Trigger: GCTGTGATCTCCAGCATCATTTCCAGACAAGCTGCAAAGGGGCCTCCCACTATGGCCTGACCAAGGACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CCA 72 bp | GTTGGTGAGACACAGGGTGCAGTAGGTGTGTCCACATaGAGTGTCCAGAGGGTCCAGCAATGCTTGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: VGETQGAVGVST*SVQRVQQCLQT Trigger: TGTCTGCAAGCATTGCTGGACCCTCTGGACACTCCATGTGGACACACCTACTGCACCCTGTGTCTCACCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CAA 72 bp | GTACGTGTAGAAGTGGTTTTCCTCTGGGGAGTGGTTTaGCCCACACACTATGCACAGAGGCTCGGGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VRVEVVFLWGVV*PTHYAQRLGTG Trigger: CCCAGTCCCGAGCCTCTGTGCATAGTGTGTGGGCAAAACCACTCCCCAGAGGAAAACCACTTCTACACGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CAA 90 bp | ATCCTCTGTGTACGTGTAGAAGTGGTTTTCCTCTGGGGAGTGGTTTaGCCCACACACTATGCACAGAGGCTCGGGACTGGGATCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ILCVRVEVVFLWGVV*PTHYAQRLGTGIWV Trigger: GACCCAGATCCCAGTCCCGAGCCTCTGTGCATAGTGTGTGGGCAAAACCACTCCCCAGAGGAAAACCACTTCTACACGTACACAGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CAA 90 bp | ATGCTTGTAATTTCACCATCTTCGGGGACAGTGGTGTTCTCAGAGTaGTCCCTGCCCTGGTCAACATGGTTGGCAACGACACTCCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: MLVISPSSGTVVFSE*SLPWSTWLATTLPL Trigger: GAGCGGGAGTGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGATGGTGAAATTACAAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121690.8 |
||
| CDS CAA 72 bp | GTGTCCACATGGAGTGTCCAGAGGGTCCAGCAATGCTaGCAGACAGATGTGGCATATGAGGTCGTCATCTAC | + |
|
Preference number: 6 (lower is better) Translates to: VSTWSVQRVQQC*QTDVAYEVVIY Trigger: GTAGATGACGACCTCATATGCCACATCTGTCTGCAAGCATTGCTGGACCCTCTGGACACTCCATGTGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CAA 72 bp | ATTTCACCATCTTCGGGGACAGTGGTGTTCTCAGAGTaGTCCCTGCCCTGGTCAACATGGTTGGCAACGACA | + |
|
Preference number: 6 (lower is better) Translates to: ISPSSGTVVFSE*SLPWSTWLATT Trigger: TGTCGTTGCCAACCATGTTGACCAGGGCAGGGACAACTCTGAGAACACCACTGTCCCCGAAGATGGTGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121690.8 |
||
| CDS CAA 90 bp | GCAGTAGGTGTGTCCACATGGAGTGTCCAGAGGGTCCAGCAATGCTaGCAGACAGATGTGGCATATGAGGTCGTCATCTACATCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AVGVSTWSVQRVQQC*QTDVAYEVVIYILC Trigger: ACAGAGGATGTAGATGACGACCTCATATGCCACATCTGTCTGCAAGCATTGCTGGACCCTCTGGACACTCCATGTGGACACACCTACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS GCA 72 bp | TGTCCACATGGAGTGTCCAGAGGGTCCAGCAATGCTTaGAGACAGATGTGGCATATGAGGTCGTCATCTACA | + |
|
Preference number: 6 (lower is better) Translates to: CPHGVSRGSSNA*RQMWHMRSSST Trigger: TGTAGATGACGACCTCATATGCCACATCTGTCTGCAAGCATTGCTGGACCCTCTGGACACTCCATGTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CCA 72 bp | GTGTCCAGAGGGTCCAGCAATGCTTGCAGACAGATGTaGCATATGAGGTCGTCATCTACATCCTCTGTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: VSRGSSNACRQM*HMRSSSTSSVY Trigger: GTACACAGAGGATGTAGATGACGACCTCATATGCCACATCTGTCTGCAAGCATTGCTGGACCCTCTGGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CCA 72 bp | GGTCTTTCCAGACACTTACAACCTTCTCATGACAGGTaGCTGCAGGCTGAATCAGATGAGCTGCACTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GLSRHLQPSHDR*LQAESDELHSL Trigger: CAGAGAGTGCAGCTCATCTGATTCAGCCTGCAGCCACCTGTCATGAGAAGGTTGTAAGTGTCTGGAAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140084.4 |
||
| CDS GCA 72 bp | AGAAGCTTGTTGACCAAGATACTGGATTTCTTGCAGTaGTGCAGAACCACAGGCTTTCGATCCACAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSLLTKILDFLQ*CRTTGFRSTGQ Trigger: CTGCCCTGTGGATCGAAAGCCTGTGGTTCTGCAGCACTGCAAGAAATCCAGTATCTTGGTCAACAAGCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CCA 72 bp | TACATCCTCTGTGTACGTGTAGAAGTGGTTTTCCTCTaGGGAGTGGTTTTGCCCACACACTATGCACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YILCVRVEVVFL*GVVLPTHYAQR Trigger: CCTCTGTGCATAGTGTGTGGGCAAAACCACTCCCCAGAGGAAAACCACTTCTACACGTACACAGAGGATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CAA 90 bp | ACCAACAGCTTATTGAGAAGCTTGTTGACCAAGATACTGGATTTCTaGCAGTGCTGCAGAACCACAGGCTTTCGATCCACAGGGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TNSLLRSLLTKILDF*QCCRTTGFRSTGQK Trigger: CTTCTGCCCTGTGGATCGAAAGCCTGTGGTTCTGCAGCACTGCAAGAAATCCAGTATCTTGGTCAACAAGCTTCTCAATAAGCTGTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||
| CDS CAA 72 bp | TTATTGAGAAGCTTGTTGACCAAGATACTGGATTTCTaGCAGTGCTGCAGAACCACAGGCTTTCGATCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LLRSLLTKILDF*QCCRTTGFRST Trigger: TGTGGATCGAAAGCCTGTGGTTCTGCAGCACTGCAAGAAATCCAGTATCTTGGTCAACAAGCTTCTCAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087161.10 ENSMUST00000117388.8 |
||