Pregenerated sensors for LNPK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009207Ensembl transcript IDs: ENSMUST00000064503.13, ENSMUST00000102676.9, ENSMUST00000111993.9, ENSMUST00000130232.8, ENSMUST00000130586.8
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTATTCTTTTCATTTTACAGCTTAAATAAATGCAGAGAGGTTAGGTaGAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: LFFSFYSLNKCREVR*NAHDCKADIQVQFH Trigger: GTGGAACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGCATTTATTTAAGCTGTAAAATGAAAAGAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR CCA 90 bp | CGTACCAATGCGTATGTAATTAAGGTTACAGCTTTCAGCATTACTTaGTGTAAACACCTAAACAGATATTTCCTTCCCACTGGCAAATAT | + |
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Preference number: 1 (lower is better) Translates to: RTNAYVIKVTAFSIT*CKHLNRYFLPTGKY Trigger: ATATTTGCCAGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCTGAAAGCTGTAACCTTAATTACATACGCATTGGTACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR GCA 90 bp | TCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATaGCTCAGAATATTAACAAACTGGGTTCTTTTATATATGTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: SSPVPHASITGTTLK*LRILTNWVLLYMSD Trigger: ATCTGACATATATAAAAGAACCCAGTTTGTTAATATTCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR CAA 90 bp | CTTGGTTCAAGATTAGGAACAGAATCAGCTCTGAGAACAGGTGACTaGGCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LGSRLGTESALRTGD*ASFVEVSSFSVSSW Trigger: CCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGTTCCTAATCTTGAACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGTGTCTGCTCTGTAACTaGTATTTTGTCATCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: WLRLLRFPRSQSLLGSLLCLLCN*YFVISL Trigger: CAGAGAGATGACAAAATACCAGTTACAGAGCAGACA...CAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGATTCTCAGTCTCTTCTTaGTTCTCTGCTGGCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSPVPHASITGTTLKCLRFSVSS*FSAGSS Trigger: AGAGGAGCCAGCAGAGAACCAAGAAGAGACTGAGAA...TCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111993.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGAGGTTAGGTGAAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTTTTTTAACTTTAGAATaGACAGCTATGCCTCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: AERLGEMPTIAKLTFKSSFLTLE*TAMPLH Trigger: ATGCAGAGGCATAGCTGTGCATTCTAAAGTTAAAAA...ACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGAGGTTAGGTGAAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTACTATATACATTATGTaGCTTTGGCCCAGTTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: AERLGEMPTIAKLTFKSSTIYIM*LWPSCK Trigger: TTTACAACTGGGCCAAAGGCACATAATGTATATAGT...ACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR GCA 90 bp | GCAGAGAGGTTAGGTGAAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTGGCACTACACTAAAATaGCTCAGAATATTAACAAAC | + |
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Preference number: 2 (lower is better) Translates to: AERLGEMPTIAKLTFKSSGTTLK*LRILTN Trigger: GTTTGTTAATATTCTGAGGCATTTTAGTGTAGTGCC...ACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR CCA 90 bp | AGCATTACTTGGTGTAAACACCTAAACAGATATTTCCTTCCCACTGGCAAATATTTCTTGGTTCTCTGCTaGCTCCTCTGGACCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: SITWCKHLNRYFLPTGKYFLVLC*LLWTRC Trigger: ACATCTGGTCCAGAGGAGCCAGCAGAGAACCAAGAA...ATATTTGCCAGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111993.9 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGAGAGAAATACTGCACTTaGCTGTTTAGTTGCATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: SSPVPHASITGTTLKCLREKYCT*LFSCIL Trigger: AAGAATGCAACTAAACAGTCAAGTGCAGTATTTCTC...TCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR TCA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCATAGTTTTCATACAGTaGGTTTTCCCTACCAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: HSSPVPHASITGTTLKCLIVFIQ*VFPTKV Trigger: TACCTTGGTAGGGAAAACTCACTGTATGAAAACTAT...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR TCA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAACATGTCTCCCCTATaGTGTAAATTCACTTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: HSSPVPHASITGTTLKCLNMSPL*CKFTSV Trigger: AACTGAAGTGAATTTACATCATAGGGGAGACATGTT...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR CCA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCGCTTTCAGCATTACTTaGTGTAAACACCTAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: HSSPVPHASITGTTLKCLAFSIT*CKHLNR Trigger: TCTGTTTAGGTGTTTACACCAAGTAATGCTGAAAGC...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGAATATTAACACCTCTGCATATTAACTaGTACCACGTGCTTTTACTG | + |
|
Preference number: 2 (lower is better) Translates to: VPHASITGTTLKCLRILTPLHIN*YHVLLL Trigger: CAGTAAAAGCACGTGGTATCAGTTAATATGCAGAGG...TGTTAATATTCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTCCGCACAGCTATGCCTCTaGATATTAACTGATACCACG | + |
|
Preference number: 2 (lower is better) Translates to: RKSRYLTKKNAARSSLFSAQLCL*ILTDTT Trigger: CGTGGTATCAGTTAATATGCAGAGGCATAGCTGTGC...GGAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR CCA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCATATTTCCTTCCCACTaGCAAATATCTCCAAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: HSSPVPHASITGTTLKCLIFPSH*QISPKL Trigger: TAACTTTGGAGATATTTGCCAGTGGGAAGGAAATAT...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR GCA 90 bp | AGCATTACTTGGTGTAAACACCTAAACAGATATTTCCTTCCCACTGGCAAATATATCACTTGGCTTGTCTaGTCTGTAACTGGTATTTTG | + |
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Preference number: 2 (lower is better) Translates to: SITWCKHLNRYFLPTGKYITWLV*SVTGIL Trigger: CAAAATACCAGTTACAGAGCAGACAAGCCAAGTGAT...ATATTTGCCAGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111993.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTATTTTTCAGATAGCCAAGTCATCCATCAACATACTATGTGAGGAAGTCAACAAAGAAAAACGCTaGCAGGTCATCTTTATTTTC | + |
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Preference number: 2 (lower is better) Translates to: QGIFQIAKSSINILCEEVNKEKR*QVIFIF Trigger: GAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTT...GACTTCCTCACATAGTATGTTGATGGATGACTTGGCTATCTGAAAAATACCTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR CCA 90 bp | GTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGAATATTAACACCAGTTGAAGGCACATaGAAGTATTTACTACTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: VPHASITGTTLKCLRILTPVEGT*KYLLLC Trigger: ACAAAGTAGTAAATACTTCCATGTGCCTTCAACTGG...TGTTAATATTCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111993.9 |
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| 3UTR-3UTR CAA 90 bp | CGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCTCCTTCTGTAACTGGTATTTaGTCATCTCTCTGCTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: RLLRFPRSQSLLGSLLAPSVTGI*SSLCSV Trigger: TACTGAGCAGAGAGATGACAAAATACCAGTTACAGA...AGGAGCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTTCTGTAACTGGTATTTaGTCATCTCTCTGCTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: LASFVEVSSFSVSSWFSASVTGI*SSLCSV Trigger: TACTGAGCAGAGAGATGACAAAATACCAGTTACAGA...AGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAGCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| 3UTR GCA 72 bp | ACGATTGCAAAGCTGACATTCAAGTCCAGTTCCACATaGTTCAATTACAGGCACTACACTAAAATGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: TIAKLTFKSSST*FNYRHYTKMPQ Trigger: CTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATGTCAGCTTTGCAATCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR TCA 72 bp | ACTTTAGAATGCACAGCTATGCCTCTGCATATTAACTaGTACCACGTGCTTTTACTGTCAATACCTAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: TLECTAMPLHIN*YHVLLLSIPSG Trigger: ACCACTAGGTATTGACAGTAAAAGCACGTGGTATCAGTTAATATGCAGAGGCATAGCTGTGCATTCTAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR-3UTR CAA 90 bp | GTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGAATATTAACATTGGATACACTGAACTaGCTGGGCAATCTGAATATG | + |
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Preference number: 3 (lower is better) Translates to: VPHASITGTTLKCLRILTLDTLN*LGNLNM Trigger: CATATTCAGATTGCCCAGCAAGTTCAGTGTATCCAA...TGTTAATATTCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR TCA 72 bp | TCATTTTACAGCTTAAATAAATGCAGAGAGGTTAGGTaGAATGCCCACGATTGCAAAGCTGACATTCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: SFYSLNKCREVR*NAHDCKADIQV Trigger: GACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGCATTTATTTAAGCTGTAAAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR CCA 72 bp | GCGTATGTAATTAAGGTTACAGCTTTCAGCATTACTTaGTGTAAACACCTAAACAGATATTTCCTTCCCACT | + |
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Preference number: 3 (lower is better) Translates to: AYVIKVTAFSIT*CKHLNRYFLPT Trigger: AGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCTGAAAGCTGTAACCTTAATTACATACGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| 3UTR GCA 72 bp | GTTCCACATGCTTCAATTACAGGCACTACACTAAAATaGCTCAGAATATTAACAAACTGGGTTCTTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: VPHASITGTTLK*LRILTNWVLLY Trigger: ATATAAAAGAACCCAGTTTGTTAATATTCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | GCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCTGTGGAGGAGGACCCTaGCTAGAGCTTGCTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ASFVEVSSFSVSSWFSAGCGGGP*LELAGA Trigger: AGCACCAGCAAGCTCTAGTCAGGGTCCTCCTCCACA...GCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGGTTAGGTGAAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTTGGCCCAGGAGACACTaGACCTTGTGGAGGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: AERLGEMPTIAKLTFKSSWPRRH*TLWRRT Trigger: GGTCCTCCTCCACAAGGTCCAGTGTCTCCTGGGCCA...ACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | GCAGAGAGGTTAGGTGAAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTGCGCCTGGGCAAGGCTaGAGCAACAGTTCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AERLGEMPTIAKLTFKSSAPGQG*SNSSFW Trigger: CCAGAAAGAACTGTTGCTCCAGCCTTGCCCAGGCGC...ACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | GCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCACCCTGACTAGAGCTTaGTGGTGCTGGGGAAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: ASFVEVSSFSVSSWFSAGTLTRA*WCWGKV Trigger: AACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGT...GCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | CTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCTGGAAGCCGTGGAGCTTaGGGTCTCGTTTTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRLLRFPRSQSLLGSLLAGSRGA*GLVFLA Trigger: TGCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCC...AGCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | CTGAGAACAGGTGACTTGGCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTCTCTTGTCCTGGCTTTaGAGTTACAGCTGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: LRTGDLASFVEVSSFSVSLLSWL*SYSCSS Trigger: GCTGGAGCAGCTGTAACTGCAAAGCCAGGACAAGAG...AGAGACTGAGAACGAGGAAACCTCAACAAACGAAGCCAAGTCACCTGTTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | CTTGGTTCAAGATTAGGAACAGAATCAGCTCTGAGAACAGGTGACTTGGCTTCGGGAAGCCGTGGAGCTTaGGGTCTCGTTTTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LGSRLGTESALRTGDLASGSRGA*GLVFLA Trigger: TGCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCC...CGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGTTCCTAATCTTGAACCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | TGGCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGCTGACTAGAGCTTGCTaGTGCTGGGGAAAGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: WLRLLRFPRSQSLLGSLLLTRAC*CWGKVS Trigger: AGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAG...CAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGAGCGCCTGGGCAAGGCTaGAGCAACAGTTCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SSPVPHASITGTTLKCLRAPGQG*SNSSFW Trigger: CCAGAAAGAACTGTTGCTCCAGCCTTGCCCAGGCGC...TCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | CTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCTGAGCCTTCCACTGCCTaGCTCTTCTCAAAACTAAAC | + |
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Preference number: 4 (lower is better) Translates to: LRLLRFPRSQSLLGSLLAEPSTA*LFSKLN Trigger: GTTTAGTTTTGAGAAGAGGCAGGCAGTGGAAGGCTC...AGCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | TTGGCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTGCGCCTGGGCAAGGCTaGAGCAACAGTTCTTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LACLLCNWYFVISLLSTIAPGQG*SNSSFW Trigger: CCAGAAAGAACTGTTGCTCCAGCCTTGCCCAGGCGC...AATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | ACAGAATCAGCTCTGAGAACAGGTGACTTGGCTTCGTTTGTTGAGGTTTCCTCGAAACTCTGGAAGCCGTaGAGCTTGAGGTCTCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: TESALRTGDLASFVEVSSKLWKP*SLRSRF Trigger: AAAACGAGACCTCAAGCTCCACGGCTTCCAGAGTTT...CGAGGAAACCTCAACAAACGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | ACAGAATCAGCTCTGAGAACAGGTGACTTGGCTTCGTTTGTTGAGGTTTCCTCGCTCAAAACTAAACTCTaGAAGCCGTGGAGCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TESALRTGDLASFVEVSSLKTKL*KPWSLR Trigger: CCTCAAGCTCCACGGCTTCCAGAGTTTAGTTTTGAG...CGAGGAAACCTCAACAAACGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | CTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCTGGCCCAGGAGACACTaGACCTTGTGGAGGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: LCNWYFVISLLSTIIKNIWPRRH*TLWRRT Trigger: GGTCCTCCTCCACAAGGTCCAGTGTCTCCTGGGCCA...GATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAACACTGCTGACATATaGGGGCGTACCTGTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HSSPVPHASITGTTLKCLNTADI*GRTCSV Trigger: CACAGAACAGGTACGCCCTCATATGTCAGCAGTGTT...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | TCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGACTGACTAGAGCTTGCTaGTGCTGGGGAAAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPVPHASITGTTLKCLRLTRAC*CWGKVS Trigger: AGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAG...TCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTCCTGGCCCAGGAGACACTaGACCTTGTGGAGGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RKSRYLTKKNAARSSLFSWPRRH*TLWRRT Trigger: GGTCCTCCTCCACAAGGTCCAGTGTCTCCTGGGCCA...GGAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTGTTCTCGGGGGAGAATaGGTCTTGCTAAAGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LACLLCNWYFVISLLSTIVLGGE*VLLKVD Trigger: GTCCACCTTTAGCAAGACCCATTCTCCCCCGAGAAC...AATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| 3UTR CAA 72 bp | AGATTAGGAACAGAATCAGCTCTGAGAACAGGTGACTaGGCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLGTESALRTGD*ASFVEVSSFSV Trigger: GACTGAGAACGAGGAAACCTCAACAAACGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGTTCCTAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR TCA 90 bp | AGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTCCTGTGGAGGAGGACCCTaGCTAGAGCTTGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSRYLTKKNAARSSLFSCGGGP*LELAGA Trigger: AGCACCAGCAAGCTCTAGTCAGGGTCCTCCTCCACA...GGAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGTATTTTTCAGATAGCCAAGTCATCCATCAACATACTATGTGAGGAAGTCCTCTTGTCCTGGCTTTaGAGTTACAGCTGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGIFQIAKSSINILCEEVLLSWL*SYSCSS Trigger: GCTGGAGCAGCTGTAACTGCAAAGCCAGGACAAGAG...GACTTCCTCACATAGTATGTTGATGGATGACTTGGCTATCTGAAAAATACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGATTAGGAACAGAATCAGCTCTGAGAACAGGTGACTTGGCTTCGTTTGTTACTAGAGCTTGCTGGTaGTGGGGAAAGGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLGTESALRTGDLASFVTRACW*WGKVSL Trigger: CAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGT...AACAAACGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGTTCCTAATCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGACCCTGACTAGAGCTTaGTGGTGCTGGGGAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLLCNWYFVISLLSTIIKTLTRA*WCWGKV Trigger: AACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGT...CTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCGAGCCTTCCACTGCCTaGCTCTTCTCAAAACTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HSSPVPHASITGTTLKCLEPSTA*LFSKLN Trigger: GTTTAGTTTTGAGAAGAGGCAGGCAGTGGAAGGCTC...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGTATTTTTCAGATAGCCAAGTCATCCATCAACATACTATGTGAGGAAGTCCTCTTCTTGGTTCTCTaGTGGCTCCTCTGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QGIFQIAKSSINILCEEVLFLVL*WLLWTR Trigger: TCTGGTCCAGAGGAGCCAGCAGAGAACCAAGAAGAG...GACTTCCTCACATAGTATGTTGATGGATGACTTGGCTATCTGAAAAATACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTAGAGCTTGCTGGTGCTaGGGAAAGGTTTCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LACLLCNWYFVISLLSTIRACWC*GKVSLS Trigger: GCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCT...AATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGTATTTTTCAGATAGCCAAGTCATCCATCAACATACTATGTGAGGAAGTCGTTCTCGGGGGAGAATaGGTCTTGCTAAAGGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QGIFQIAKSSINILCEEVVLGGE*VLLKVD Trigger: GTCCACCTTTAGCAAGACCCATTCTCCCCCGAGAAC...GACTTCCTCACATAGTATGTTGATGGATGACTTGGCTATCTGAAAAATACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAAACTCTGGAAGCCGTaGAGCTTGAGGTCTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSSPVPHASITGTTLKCLKLWKP*SLRSRF Trigger: AAAACGAGACCTCAAGCTCCACGGCTTCCAGAGTTT...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | CAAGGTATTTTTCAGATAGCCAAGTCATCCATCAACATACTATGTGAGGAAGTCAACACTGCTGACATATaGGGGCGTACCTGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGIFQIAKSSINILCEEVNTADI*GRTCSV Trigger: CACAGAACAGGTACGCCCTCATATGTCAGCAGTGTT...GACTTCCTCACATAGTATGTTGATGGATGACTTGGCTATCTGAAAAATACCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR TCA 90 bp | AGCATTACTTGGTGTAAACACCTAAACAGATATTTCCTTCCCACTGGCAAATATGGAAGCCGTGGAGCTTaGGGTCTCGTTTTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SITWCKHLNRYFLPTGKYGSRGA*GLVFLA Trigger: TGCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCC...ATATTTGCCAGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | TCAAGATTAGGAACAGAATCAGCTCTGAGAACAGGTGACTTGGCTTCGTTTGTTAAGGTTTCTTTGAGCTaGAGTTCGCTGACGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRLGTESALRTGDLASFVKVSLS*SSLTNL Trigger: GAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTT...AACAAACGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGTTCCTAATCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | GTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGAATATTAACAACCCTGACTAGAGCTTaGTGGTGCTGGGGAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPHASITGTTLKCLRILTTLTRA*WCWGKV Trigger: AACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGT...TGTTAATATTCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | TTGGCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTACGAATCTCTTGTCCTaGCTTTGCAGTTACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LACLLCNWYFVISLLSTITNLLS*LCSYSC Trigger: GCAGCTGTAACTGCAAAGCCAGGACAAGAGATTCGT...AATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR CCA 90 bp | TTTCATACAGTGAGTTTTCCCTACCAAGGTATTTTTCAGATAGCCAAGTCATCCAGAGCTTGCTGGTGCTaGGGAAAGGTTTCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSFPYQGIFQIAKSSRACWC*GKVSLS Trigger: GCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCT...GGATGACTTGGCTATCTGAAAAATACCTTGGTAGGGAAAACTCACTGTATGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGGTTTCTTTGAGCTaGAGTTCGCTGACGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACLLCNWYFVISLLSTIIKVSLS*SSLTNL Trigger: GAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTT...GATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | GTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACTAGAGCTTGCTGGTaGTGGGGAAAGGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VCSVTGILSSLCSVLLSRTRACW*WGKVSL Trigger: CAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGT...TCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | CAAGGTATTTTTCAGATAGCCAAGTCATCCATCAACATACTATGTGAGGAAGTCACGAATCTCTTGTCCTaGCTTTGCAGTTACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGIFQIAKSSINILCEEVTNLLS*LCSYSC Trigger: GCAGCTGTAACTGCAAAGCCAGGACAAGAGATTCGT...GACTTCCTCACATAGTATGTTGATGGATGACTTGGCTATCTGAAAAATACCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | TTTCATACAGTGAGTTTTCCCTACCAAGGTATTTTTCAGATAGCCAAGTCATCCCTCAAAACTAAACTCTaGAAGCCGTGGAGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSFPYQGIFQIAKSSLKTKL*KPWSLR Trigger: CCTCAAGCTCCACGGCTTCCAGAGTTTAGTTTTGAG...GGATGACTTGGCTATCTGAAAAATACCTTGGTAGGGAAAACTCACTGTATGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | TCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCTAACACTGCTGACATATaGGGGCGTACCTGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVTGILSSLCSVLLSRTSNTADI*GRTCSV Trigger: CACAGAACAGGTACGCCCTCATATGTCAGCAGTGTT...AGATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | TTTCATACAGTGAGTTTTCCCTACCAAGGTATTTTTCAGATAGCCAAGTCATCCAAGGTTTCTTTGAGCTaGAGTTCGCTGACGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSFPYQGIFQIAKSSKVSLS*SSLTNL Trigger: GAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTT...GGATGACTTGGCTATCTGAAAAATACCTTGGTAGGGAAAACTCACTGTATGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | CTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCGAGCCTTCCACTGCCTaGCTCTTCTCAAAACTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LCNWYFVISLLSTIIKNIEPSTA*LFSKLN Trigger: GTTTAGTTTTGAGAAGAGGCAGGCAGTGGAAGGCTC...GATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | AGCATTACTTGGTGTAAACACCTAAACAGATATTTCCTTCCCACTGGCAAATATACGAATCTCTTGTCCTaGCTTTGCAGTTACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SITWCKHLNRYFLPTGKYTNLLS*LCSYSC Trigger: GCAGCTGTAACTGCAAAGCCAGGACAAGAGATTCGT...ATATTTGCCAGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | AGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTCCCTGACTAGAGCTTGCTaGTGCTGGGGAAAGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSRYLTKKNAARSSLFSLTRAC*CWGKVS Trigger: AGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAG...GGAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | AGCATTACTTGGTGTAAACACCTAAACAGATATTTCCTTCCCACTGGCAAATATAAACTCTGGAAGCCGTaGAGCTTGAGGTCTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SITWCKHLNRYFLPTGKYKLWKP*SLRSRF Trigger: AAAACGAGACCTCAAGCTCCACGGCTTCCAGAGTTT...ATATTTGCCAGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | TTTCATACAGTGAGTTTTCCCTACCAAGGTATTTTTCAGATAGCCAAGTCATCCCTCCTTTGCTTTCTTTaGGTCTGGATCAAACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHTVSFPYQGIFQIAKSSLLCFL*VWIKPF Trigger: GAAAGGTTTGATCCAGACTCAAAGAAAGCAAAGGAG...GGATGACTTGGCTATCTGAAAAATACCTTGGTAGGGAAAACTCACTGTATGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR TCA 90 bp | TGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGCTCCTTTGCTTTCTTTaGGTCTGGATCAAACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLLCNWYFVISLLSTIIKLLCFL*VWIKPF Trigger: GAAAGGTTTGATCCAGACTCAAAGAAAGCAAAGGAG...CTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | TTGGCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTTGTCATGACAAGTCTTaGTGTAAACTCATCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LACLLCNWYFVISLLSTICHDKS*CKLIRK Trigger: CTTCCTGATGAGTTTACAGCAAGACTTGTCATGACA...AATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR GCA 90 bp | GTGAGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTACTAGAGCTTGCTGGTaGTGGGGAAAGGTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VRKSRYLTKKNAARSSLFTRACW*WGKVSL Trigger: CAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGT...AAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CCA 90 bp | GTGAGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTCTCAAAACTAAACTCTaGAAGCCGTGGAGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRKSRYLTKKNAARSSLFLKTKL*KPWSLR Trigger: CCTCAAGCTCCACGGCTTCCAGAGTTTAGTTTTGAG...AAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTCCTTCTCAGTCTCTTCTTaGTTCTCTGCTGGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKSRYLTKKNAARSSLFSFSVSS*FSAGSS Trigger: AGAGGAGCCAGCAGAGAACCAAGAAGAGACTGAGAA...GGAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
||
| CDS-3UTR TCA 90 bp | TCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCTCTCCTTTGCTTTCTTTaGGTCTGGATCAAACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVTGILSSLCSVLLSRTSLLCFL*VWIKPF Trigger: GAAAGGTTTGATCCAGACTCAAAGAAAGCAAAGGAG...AGATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTGTCATGACAAGTCTTaGTGTAAACTCATCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VRKSRYLTKKNAARSSLFCHDKS*CKLIRK Trigger: CTTCCTGATGAGTTTACAGCAAGACTTGTCATGACA...AAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | ACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCTTGTTCTTGTCATGACAAGTCTTaGTGTAAACTCATCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TGILSSLCSVLLSRTSCSCHDKS*CKLIRK Trigger: CTTCCTGATGAGTTTACAGCAAGACTTGTCATGACA...AGAACAAGATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTCCATCACTTGGCTTGTCTaGTCTGTAACTGGTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSRYLTKKNAARSSLFSITWLV*SVTGIL Trigger: CAAAATACCAGTTACAGAGCAGACAAGCCAAGTGAT...GGAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
||
| CDS-3UTR CCA 90 bp | AGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTCCTGTCTGCTCTGTAACTaGTATTTTGTCATCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKSRYLTKKNAARSSLFSCLLCN*YFVISL Trigger: CAGAGAGATGACAAAATACCAGTTACAGAGCAGACA...GGAAAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
||
| CDS GCA 90 bp | CCCAGGAGACACTGGACCTTGTGGAGGAGGACCCTGACTAGAGCTTaGTGGTGCTGGGGAAAGGTTTCTTTGAGCTGCAGTTCGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: PRRHWTLWRRTLTRA*WCWGKVSLSCSSLT Trigger: CGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGTCCTCCTCCACAAGGTCCAGTGTCTCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130232.8 ENSMUST00000130586.8 |
||
| CDS GCA 90 bp | ACCCTGACTAGAGCTTGCTGGTGCTGGGGAAAGGTTTCTTTGAGCTaGAGTTCGCTGACGAATCTCTTGTCCTGGCTTTGCAGTTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLTRACWCWGKVSLS*SSLTNLLSWLCSYS Trigger: GCTGTAACTGCAAAGCCAGGACAAGAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130232.8 ENSMUST00000130586.8 |
||
| CDS CCA 90 bp | AGTATTCAACAATTCTATCCAGAGCACCTCGTTCTCGGGGGAGAATaGGTCTTGCTAAAGGTGGACCTGGAGGGTGAAGGCCCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIQQFYPEHLVLGGE*VLLKVDLEGEGPFQ Trigger: CTGGAATGGGCCTTCACCCTCCAGGTCCACCTTTAGCAAGACCCATTCTCCCCCGAGAACGAGGTGCTCTGGATAGAATTGTTGAATACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 |
||
| CDS-3UTR CAA 90 bp | GCAGAGAGGTTAGGTGAAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTGGGGGAGAATGGGTCTaGCTAAAGGTGGACCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AERLGEMPTIAKLTFKSSGGEWV*LKVDLE Trigger: CTCCAGGTCCACCTTTAGCAAGACCCATTCTCCCCC...ACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCTTGGGGAAAGGTTTCTTaGAGCTGCAGTTCGCTGACG | + |
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Preference number: 5 (lower is better) Translates to: LRLLRFPRSQSLLGSLLAWGKVS*SCSSLT Trigger: CGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCA...AGCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | GCAGAGAGGTTAGGTGAAATGCCCACGATTGCAAAGCTGACATTCAAGTCCAGTTGGAAGCCGTGGAGCTaGAGGTCTCGTTTTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: AERLGEMPTIAKLTFKSSWKPWS*RSRFSC Trigger: GCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCCA...ACTGGACTTGAATGTCAGCTTTGCAATCGTGGGCATTTCACCTAACCTCTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | TGGCTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGTGGAAGCCGTGGAGCTaGAGGTCTCGTTTTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: WLRLLRFPRSQSLLGSLLWKPWS*RSRFSC Trigger: GCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCCA...CAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCTGCGGCTCAAACTCCTTaGCTTTCTTTGAGTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LRLLRFPRSQSLLGSLLAAAQTP*LSLSLD Trigger: ATCCAGACTCAAAGAAAGCAAAGGAGTTTGAGCCGC...AGCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | TTGGCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTGGGGGAGAATGGGTCTaGCTAAAGGTGGACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LACLLCNWYFVISLLSTIGGEWV*LKVDLE Trigger: CTCCAGGTCCACCTTTAGCAAGACCCATTCTCCCCC...AATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | ACAGAATCAGCTCTGAGAACAGGTGACTTGGCTTCGTTTGTTGAGGTTTCCTCGCTAGAACTTCTACTGTaGAAGGTTTTGCCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: TESALRTGDLASFVEVSSLELLL*KVLPSI Trigger: GATGGAGGGCAAAACCTTCAACAGTAGAAGTTCTAG...CGAGGAAACCTCAACAAACGAAGCCAAGTCACCTGTTCTCAGAGCTGATTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | TCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGATGGGGAAAGGTTTCTTaGAGCTGCAGTTCGCTGACG | + |
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Preference number: 5 (lower is better) Translates to: SSPVPHASITGTTLKCLRWGKVS*SCSSLT Trigger: CGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCA...TCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CATTCAAGTCCAGTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCTGGAAGCCGTGGAGCTaGAGGTCTCGTTTTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: HSSPVPHASITGTTLKCLWKPWS*RSRFSC Trigger: GCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCCA...GAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAACTGGACTTGAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS TCA 90 bp | TTTCAGATAGAAAATGAGACATCTGAGGTATTGTTCCTCCTTCAATaGGCTGGCTTTCTGCTGAGGGCACACTTTCTAGTAGCGTGGGAC | + |
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Preference number: 5 (lower is better) Translates to: FQIENETSEVLFLLQ*AGFLLRAHFLVAWD Trigger: GTCCCACGCTACTAGAAAGTGTGCCCTCAGCAGAAAGCCAGCTCATTGAAGGAGGAACAATACCTCAGATGTCTCATTTTCTATCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCGGGGGAGAATGGGTCTaGCTAAAGGTGGACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LCNWYFVISLLSTIIKNIGGEWV*LKVDLE Trigger: CTCCAGGTCCACCTTTAGCAAGACCCATTCTCCCCC...GATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CTTCGTTTGTTGAGGTTTCCTCGTTCTCAGTCTCTTCTTGGTTCTCTGCTGGCTACTCCTTTGCTTTCTTaGAGTCTGGATCAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: LRLLRFPRSQSLLGSLLATPLLS*SLDQTF Trigger: AAAGGTTTGATCCAGACTCAAAGAAAGCAAAGGAGT...AGCCAGCAGAGAACCAAGAAGAGACTGAGAACGAGGAAACCTCAACAAACGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS TCA 90 bp | CAGTACTATTATCAAGAACATCTTGTTCTTCTAAAGAGTCTTCAATaGGCTGGCTTTCTGCTGAGGGCACACTTTCTAGTAGCGTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QYYYQEHLVLLKSLQ*AGFLLRAHFLVAWD Trigger: GTCCCACGCTACTAGAAAGTGTGCCCTCAGCAGAAAGCCAGCTCATTGAAGACTCTTTAGAAGAACAAGATGTTCTTGATAATAGTACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
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| CDS-3UTR CAA 90 bp | GTGAGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTTGGGGAAAGGTTTCTTaGAGCTGCAGTTCGCTGACG | + |
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Preference number: 5 (lower is better) Translates to: VRKSRYLTKKNAARSSLFWGKVS*SCSSLT Trigger: CGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCA...AAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | AGCATTACTTGGTGTAAACACCTAAACAGATATTTCCTTCCCACTGGCAAATATGCGGCTCAAACTCCTTaGCTTTCTTTGAGTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SITWCKHLNRYFLPTGKYAAQTP*LSLSLD Trigger: ATCCAGACTCAAAGAAAGCAAAGGAGTTTGAGCCGC...ATATTTGCCAGTGGGAAGGAAATATCTGTTTAGGTGTTTACACCAAGTAATGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCGCGGCTCAAACTCCTTaGCTTTCTTTGAGTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LCNWYFVISLLSTIIKNIAAQTP*LSLSLD Trigger: ATCCAGACTCAAAGAAAGCAAAGGAGTTTGAGCCGC...GATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CTCTGTAACTGGTATTTTGTCATCTCTCTGCTCAGTACTATTATCAAGAACATCCTAGAACTTCTACTGTaGAAGGTTTTGCCCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: LCNWYFVISLLSTIIKNILELLL*KVLPSI Trigger: GATGGAGGGCAAAACCTTCAACAGTAGAAGTTCTAG...GATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGAAGTCTAGATATTTAACAAAGAAAAACGCTGCCAGGTCATCTTTATTTCTAGAACTTCTACTGTaGAAGGTTTTGCCCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VRKSRYLTKKNAARSSLFLELLL*KVLPSI Trigger: GATGGAGGGCAAAACCTTCAACAGTAGAAGTTCTAG...AAATAAAGATGACCTGGCAGCGTTTTTCTTTGTTAAATATCTAGACTTCCTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS-3UTR CAA 90 bp | CAAGGTATTTTTCAGATAGCCAAGTCATCCATCAACATACTATGTGAGGAAGTCACTCCTTTGCTTTCTTaGAGTCTGGATCAAACCTTT | + |
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Preference number: 5 (lower is better) Translates to: QGIFQIAKSSINILCEEVTPLLS*SLDQTF Trigger: AAAGGTTTGATCCAGACTCAAAGAAAGCAAAGGAGT...GACTTCCTCACATAGTATGTTGATGGATGACTTGGCTATCTGAAAAATACCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064503.13 ENSMUST00000111993.9 |
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| CDS GCA 90 bp | ATCACTTGGCTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTaGTCAGTACTATTATCAAGAACATCTTGTTCTTCTAAAGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: ITWLVCSVTGILSSL*SVLLSRTSCSSKES Trigger: AGACTCTTTAGAAGAACAAGATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAGCCAAGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
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| CDS-3UTR CAA 90 bp | GTTCCACATGCTTCAATTACAGGCACTACACTAAAATGCCTCAGAATATTAACATCTGTAACTGGTATTTaGTCATCTCTCTGCTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: VPHASITGTTLKCLRILTSVTGI*SSLCSV Trigger: TACTGAGCAGAGAGATGACAAAATACCAGTTACAGA...TGTTAATATTCTGAGGCATTTTAGTGTAGTGCCTGTAATTGAAGCATGTGGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
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| CDS TCA 72 bp | TGGAGCAACAGTTCTTTCTGGCGGTCCCCCAGGAGCTaGAGCGTCCTTCGCTGGCCCAGGAGACACTGGACC | + |
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Preference number: 6 (lower is better) Translates to: WSNSSFWRSPRS*SVLRWPRRHWT Trigger: GGTCCAGTGTCTCCTGGGCCAGCGAAGGACGCTTCAGCTCCTGGGGGACCGCCAGAAAGAACTGTTGCTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130586.8 |
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| CDS CCA 72 bp | AGCGTCCTTCGCTGGCCCAGGAGACACTGGACCTTGTaGAGGAGGACCCTGACTAGAGCTTGCTGGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SVLRWPRRHWTL*RRTLTRACWCW Trigger: CCAGCACCAGCAAGCTCTAGTCAGGGTCCTCCTCCACAAGGTCCAGTGTCTCCTGGGCCAGCGAAGGACGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130586.8 |
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| CDS TCA 72 bp | GGCCCAGGAGACACTGGACCTTGTGGAGGAGGACCCTaGCTAGAGCTTGCTGGTGCTGGGGAAAGGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GPGDTGPCGGGP*LELAGAGERFL Trigger: AAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGTCCTCCTCCACAAGGTCCAGTGTCTCCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130586.8 |
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| CDS CAA 72 bp | TATCCAGAGCACCTCGTTCTCGGGGGAGAATGGGTCTaGCTAAAGGTGGACCTGGAGGGTGAAGGCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: YPEHLVLGGEWV*LKVDLEGEGPF Trigger: GAATGGGCCTTCACCCTCCAGGTCCACCTTTAGCAAGACCCATTCTCCCCCGAGAACGAGGTGCTCTGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130586.8 |
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| CDS GCA 72 bp | ACCTTGTGGAGGAGGACCCTGACTAGAGCTTGCTGGTaGTGGGGAAAGGTTTCTTTGAGCTGCAGTTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: TLWRRTLTRACW*WGKVSLSCSSL Trigger: CAGCGAACTGCAGCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGTCCTCCTCCACAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130232.8 ENSMUST00000130586.8 |
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| CDS CCA 72 bp | CAATTCTATCCAGAGCACCTCGTTCTCGGGGGAGAATaGGTCTTGCTAAAGGTGGACCTGGAGGGTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QFYPEHLVLGGE*VLLKVDLEGEG Trigger: GCCTTCACCCTCCAGGTCCACCTTTAGCAAGACCCATTCTCCCCCGAGAACGAGGTGCTCTGGATAGAATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130586.8 |
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| CDS CAA 72 bp | CTGCTGAGGGCACACTTTCTAGTAGCGTGGGACCAGTaGAGCTTGAGCCTTCCACTGCCTGCCTCTTCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRAHFLVAWDQ*SLSLPLPASSQ Trigger: TTGAGAAGAGGCAGGCAGTGGAAGGCTCAAGCTCAACTGGTCCCACGCTACTAGAAAGTGTGCCCTCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS CAA 90 bp | AGGAGGACCCTGACTAGAGCTTGCTGGTGCTGGGGAAAGGTTTCTTaGAGCTGCAGTTCGCTGACGAATCTCTTGTCCTGGCTTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRTLTRACWCWGKVS*SCSSLTNLLSWLCS Trigger: ACTGCAAAGCCAGGACAAGAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAGGGTCCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130232.8 ENSMUST00000130586.8 |
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| CDS GCA 72 bp | AGAGCTTGCTGGTGCTGGGGAAAGGTTTCTTTGAGCTaGAGTTCGCTGACGAATCTCTTGTCCTGGCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RACWCWGKVSLS*SSLTNLLSWLC Trigger: GCAAAGCCAGGACAAGAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130232.8 ENSMUST00000130586.8 |
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| CDS CAA 72 bp | CTGACTAGAGCTTGCTGGTGCTGGGGAAAGGTTTCTTaGAGCTGCAGTTCGCTGACGAATCTCTTGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LTRACWCWGKVS*SCSSLTNLLSW Trigger: CCAGGACAAGAGATTCGTCAGCGAACTGCAGCTCAAAGAAACCTTTCCCCAGCACCAGCAAGCTCTAGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 ENSMUST00000130232.8 ENSMUST00000130586.8 |
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| CDS CCA 72 bp | GCCTTCCACTGCCTGCCTCTTCTCAAAACTAAACTCTaGAAGCCGTGGAGCTTGAGGTCTCGTTTTTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: AFHCLPLLKTKL*KPWSLRSRFSC Trigger: GCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCCAGAGTTTAGTTTTGAGAAGAGGCAGGCAGTGGAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS CCA 72 bp | TGCCTGCCTCTTCTCAAAACTAAACTCTGGAAGCCGTaGAGCTTGAGGTCTCGTTTTTCTTGCAGGATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLPLLKTKLWKP*SLRSRFSCRIQ Trigger: TTGAATCCTGCAAGAAAAACGAGACCTCAAGCTCCACGGCTTCCAGAGTTTAGTTTTGAGAAGAGGCAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064503.13 ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS TCA 72 bp | GAAAATGAGACATCTGAGGTATTGTTCCTCCTTCAATaGGCTGGCTTTCTGCTGAGGGCACACTTTCTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ENETSEVLFLLQ*AGFLLRAHFLV Trigger: TACTAGAAAGTGTGCCCTCAGCAGAAAGCCAGCTCATTGAAGGAGGAACAATACCTCAGATGTCTCATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102676.9 ENSMUST00000111993.9 |
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| CDS CCA 72 bp | AGAACATCTTGTTCTTCTAAAGAGTCTTCAATGAGCTaGCTTTCTGCTGAGGGCACACTTTCTAGTAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RTSCSSKESSMS*LSAEGTLSSSV Trigger: CACGCTACTAGAAAGTGTGCCCTCAGCAGAAAGCCAGCTCATTGAAGACTCTTTAGAAGAACAAGATGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
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| CDS GCA 72 bp | CTTGTCTGCTCTGTAACTGGTATTTTGTCATCTCTCTaGTCAGTACTATTATCAAGAACATCTTGTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVCSVTGILSSL*SVLLSRTSCSS Trigger: AGAAGAACAAGATGTTCTTGATAATAGTACTGAGCAGAGAGATGACAAAATACCAGTTACAGAGCAGACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064503.13 |
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