Pregenerated sensors for LMX1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026686Ensembl transcript IDs: ENSMUST00000028003.9, ENSMUST00000111377.8
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATaGGTTGGAGGGAAGAGCCCTGGGTACCTGCCTGGTCCCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: VYNGYWVFLCSGTAT*VGGKSPGYLPGPLC Trigger: GCAGAGGGGACCAGGCAGGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR GCA 90 bp | GTGGGCATAGTCATGGCTCTGATGATGGTCCCGGGCATGACGTCATaGCTGTCACAGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: VGIVMALMMVPGMTS*LSQPLSLEPFFLPP Trigger: AGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCTGTGACAGGCATGACGTCATGCCCGGGACCATCATCAGAGCCATGACTATGCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CCA 90 bp | TCTGATCACAGAGTGAACTCAAGCACTCAGAGCTGTGGGGCCCGGTaGAACAGTTCTCTCTGCCCTGCCGATGAGTCTCTCCAAACTAAA | + |
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Preference number: 1 (lower is better) Translates to: SDHRVNSSTQSCGAR*NSSLCPADESLQTK Trigger: TTTAGTTTGGAGAGACTCATCGGCAGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGCTCTGAGTGCTTGAGTTCACTCTGTGATCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CCA 90 bp | CTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATaGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCTGTCATGTG | + |
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Preference number: 1 (lower is better) Translates to: LVLEFHPPRLFHLLR*SVVSTPSELCLCHV Trigger: CACATGACAGAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR TCA 90 bp | ATCTGGAGTTGTATTCTAGACCTCAATGATGCTCTGATCACAGAGTaGACTCAAGCACTCAGAGCTGTGGGGCCCGGTGGAACAGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: IWSCILDLNDALITE*TQALRAVGPGGTVL Trigger: GAGAACTGTTCCACCGGGCCCCACAGCTCTGAGTGCTTGAGTTCACTCTGTGATCAGAGCATCATTGAGGTCTAGAATACAACTCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR GCA 90 bp | AACTCAAGCACTCAGAGCTGTGGGGCCCGGTGGAACAGTTCTCTCTaGCCTGCCGATGAGTCTCTCCAAACTAAAAATAAAGTTTATAAA | + |
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Preference number: 1 (lower is better) Translates to: NSSTQSCGARWNSSL*PADESLQTKNKVYK Trigger: TTTATAAACTTTATTTTTAGTTTGGAGAGACTCATCGGCAGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGCTCTGAGTGCTTGAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CCA 90 bp | CTATGCAGAGAGATAGGACTTAGGGTACCAGAACTTCCTGCTCTGTaGTCCCAGGTATCCTCTATCATCAGGTACATGACTCGGTTATAT | + |
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Preference number: 1 (lower is better) Translates to: LCREIGLRVPELPAL*SQVSSIIRYMTRLY Trigger: ATATAACCGAGTCATGTACCTGATGATAGAGGATACCTGGGACCACAGAGCAGGAAGTTCTGGTACCCTAAGTCCTATCTCTCTGCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR GCA 90 bp | CTCCAGAACGGTGGGAAGCTGTTAGGAGTCCCTAGATATCTAGTTTaGTTGAGAATGTCTATATTAAAAGACCCTGCCCTTAATGATAAA | + |
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Preference number: 1 (lower is better) Translates to: LQNGGKLLGVPRYLV*LRMSILKDPALNDK Trigger: TTTATCATTAAGGGCAGGGTCTTTTAATATAGACATTCTCAAGCAAACTAGATATCTAGGGACTCCTAACAGCTTCCCACCGTTCTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCCACACTCATCGAGGCTaGATCTGGGGTGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPHTHRG*IWGGGG Trigger: CCCACCCCCACCCCAGATTCAGCCTCGATGAGTGTG...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTGTGCTCAGGGACTGCAACATGAGTTGGAGGGAAGAGCCCTGGGTACCAGCTGTGGGGCCCGGTaGAACAGTTCTCTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SSCAQGLQHELEGRALGTSCGAR*NSSLCP Trigger: AGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGCT...GGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCGGTACCAGAACTTCCTaGTCTGTGGTCCCAGGTATC | + |
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Preference number: 2 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPGTRTS*SVVPGI Trigger: GATACCTGGGACCACAGAGCAGGAAGTTCTGGTACC...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCCCTGTGCTCAGGGACTaGAACATGAGTTGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPPVLRD*NMSWRE Trigger: TTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGG...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CAA 90 bp | GGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCACGGGATaGTCCCTGTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GHGTVPVYNGVQGTG*SLCTMATGSSCAQG Trigger: TCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGACAATCCCGTGCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR TCA 90 bp | GTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCACACACTCATCGAGGCTaGATCTGGGGTGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: VIGDQGMELSLYTMEFRAHTHRG*IWGGGG Trigger: CCCACCCCCACCCCAGATTCAGCCTCGATGAGTGTG...TGCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTCTATTGGTGTGTAGATaGATAGACATACGGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: TTPLPPSQMERSLHPLRALLVCR*IDIRHL Trigger: GAGGTGCCGTATGTCTATTCATCTACACACCAATAG...AGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCTGGCCATATGGGCTATaGAGAGAGATAGGACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPWPYGL*REIGLR Trigger: CCTAAGTCCTATCTCTCTGCATAGCCCATATGGCCA...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCACCCTTCACACAGTATaGTTGTTCCATATGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPTLHTV*LFHMGA Trigger: GGCTCCCATATGGAACAACCATACTGTGTGAAGGGT...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | TATCTGCTACATTCCTCAACCAATCAGCCACACAGACACTGTCTGTGCCCCCTACACAGCCCCTCTCACTaGAGCCCTTCTTTCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: YLLHSSTNQPHRHCLCPLHSPSH*SPSFFP Trigger: GGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCTGTG...TAGGGGGCACAGACAGTGTCTGTGTGGCTGATTGGTTGAGGAATGTAGCAGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCTGTGCTCAGGGACTGCAACATGAGTTGGAGGGAAGAGCCCTGGGTACCACCTCAATGATGCTCTaGTCACAGAGTGAACTCAAG | + |
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Preference number: 2 (lower is better) Translates to: SSCAQGLQHELEGRALGTTSMML*SQSELK Trigger: CTTGAGTTCACTCTGTGATCAGAGCATCATTGAGGT...GGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATGAGGAACTTCCTGCTCTGTaGTCCCAGGTATCCTCTATC | + |
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Preference number: 2 (lower is better) Translates to: SLCTMATGSSCAQGLQHEELPAL*SQVSSI Trigger: GATAGAGGATACCTGGGACCACAGAGCAGGAAGTTC...CTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCTATTCTAGACCTCAATaGTGCTCTGATCACAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: LFHLLRWSVVSTPSELCLYSRPQ*CSDHRV Trigger: CACTCTGTGATCAGAGCATCATTGAGGTCTAGAATA...GAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR GCA 90 bp | CGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCCTGCCTGGTCCCCTCTaGTTCTATGAACTCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: RNWRSGHGTVPVYNGVQGLPGPL*FYELHE Trigger: CTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAG...GCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCTATGGTTGTTCCATATaGGAGCCCAGGTCACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPYGCSI*EPRSQN Trigger: ATTTTGTGACCTGGGCTCCCATATGGAACAACCATA...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | CGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCGTGTACAATGGCTACTaGGTCTTCCTGTGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RNWRSGHGTVPVYNGVQGVYNGY*VFLCSG Trigger: CCCTGAGCACAGGAAGACCCAGTAGCCATTGTACAC...GCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR GCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGGGTACCAGAACTTCCTaGTCTGTGGTCCCAGGTATC | + |
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Preference number: 2 (lower is better) Translates to: NTCSRIPSTTPLPPSQMEGTRTS*SVVPGI Trigger: GATACCTGGGACCACAGAGCAGGAAGTTCTGGTACC...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | GTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCAGACTGCAACATGAGTTaGAGGGAAGAGCCCTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: VIGDQGMELSLYTMEFRADCNMS*REEPWV Trigger: TACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTC...TGCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACTTCCTGCTCTGTGGTCCCAGGTATCCTCTATCATCAGGTACATGACTCGGAGTTCACTATAGCATaGTGCCTGCCATCTGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: RTSCSVVPGILYHQVHDSEFTIA*CLPSGV Trigger: AACTCCAGATGGCAGGCAGCATGCTATAGTGAACTC...CGAGTCATGTACCTGATGATAGAGGATACCTGGGACCACAGAGCAGGAAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | AGAACTTCCTGCTCTGTGGTCCCAGGTATCCTCTATCATCAGGTACATGACTCGACCCTTCACACAGTATaGTTGTTCCATATGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RTSCSVVPGILYHQVHDSTLHTV*LFHMGA Trigger: GGCTCCCATATGGAACAACCATACTGTGTGAAGGGT...CGAGTCATGTACCTGATGATAGAGGATACCTGGGACCACAGAGCAGGAAGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGGAACTTCCTGCTCTGTaGTCCCAGGTATCCTCTATC | + |
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Preference number: 2 (lower is better) Translates to: NTCSRIPSTTPLPPSQMEELPAL*SQVSSI Trigger: GATAGAGGATACCTGGGACCACAGAGCAGGAAGTTC...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGATAGGACTTAGGGTACCAGAACTTCCTGCTCTGTGGTCCCAGGTATCCTATTCTAGACCTCAATaGTGCTCTGATCACAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: REIGLRVPELPALWSQVSYSRPQ*CSDHRV Trigger: CACTCTGTGATCAGAGCATCATTGAGGTCTAGAATA...GGATACCTGGGACCACAGAGCAGGAAGTTCTGGTACCCTAAGTCCTATCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAGCACCGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTGGCCATATGGGCTATaGAGAGAGATAGGACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SSTVIGDQGMELSLYTMEWPYGL*REIGLR Trigger: CCTAAGTCCTATCTCTCTGCATAGCCCATATGGCCA...CTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACGGTGCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTCATCCACACTCATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCAACCTCAATGATGCTCTaGTCACAGAGTGAACTCAAG | + |
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Preference number: 2 (lower is better) Translates to: HLIHTHRERGRCGYQLHPTSMML*SQSELK Trigger: CTTGAGTTCACTCTGTGATCAGAGCATCATTGAGGT...TGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATGAGTGTGGATGAGGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CCA 90 bp | CATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACACTCATCGAGGCTGTATGGTTGTTCCATATaGGAGCCCAGGTCACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: HRERGRCGYQLHPHSSRLYGCSI*EPRSQN Trigger: ATTTTGTGACCTGGGCTCCCATATGGAACAACCATA...CAGCCTCGATGAGTGTGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CAA 90 bp | CAGAACGGTGGGAAGCTGTTAGGAGTCCCTAGATATCTAGTTTGCTaGAGAATGTCTATATTAAAAGACCCTGCCCTTAATGATAAACAC | + |
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Preference number: 2 (lower is better) Translates to: QNGGKLLGVPRYLVC*RMSILKDPALNDKH Trigger: GTGTTTATCATTAAGGGCAGGGTCTTTTAATATAGACATTCTCAAGCAAACTAGATATCTAGGGACTCCTAACAGCTTCCCACCGTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CAA 90 bp | TTTCATCTCGGTATGTCATTAGAGAGTAGAATTAAGGATCTCTGTTaGCTTTCATTCACATATCTGCTACATTCCTCAACCAATCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: FHLGMSLESRIKDLC*LSFTYLLHSSTNQP Trigger: TGGCTGATTGGTTGAGGAATGTAGCAGATATGTGAATGAAAGCAAACAGAGATCCTTAATTCTACTCTCTAATGACATACCGAGATGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR TCA 72 bp | GGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATaGGTTGGAGGGAAGAGCCCTGGGTACCTGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GYWVFLCSGTAT*VGGKSPGYLPG Trigger: ACCAGGCAGGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CAA 90 bp | TGTCTGTGCCCCCTACACCCGCCTCATTCTCAGCCCACAGACTGGTTCAGGTTTGGACTGCAACATGAGTaGGAGGGAAGAGCCCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: CLCPLHPPHSQPTDWFRFGLQHE*EGRALG Trigger: ACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCC...AAACCTGAACCAGTCTGTGGGCTGAGAATGAGGCGGGTGTAGGGGGCACAGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CCA 72 bp | AGAGTGAACTCAAGCACTCAGAGCTGTGGGGCCCGGTaGAACAGTTCTCTCTGCCCTGCCGATGAGTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: RVNSSTQSCGAR*NSSLCPADESL Trigger: GAGAGACTCATCGGCAGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGCTCTGAGTGCTTGAGTTCACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR GCA 72 bp | GGAGGGAAGAGCCCTGGGTACCTGCCTGGTCCCCTCTaGTTCTATGAACTCCATGAGGCTGTTTATGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GGKSPGYLPGPL*FYELHEAVYEQ Trigger: CTGCTCATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGGGCTCTTCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR GCA 72 bp | CATTCCTCAACCAATCAGCCACACAGACACTGTCTGTaGCCCCTACACCCGCCTCATTCTCAGCCCACAGAC | + |
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Preference number: 3 (lower is better) Translates to: HSSTNQPHRHCL*PLHPPHSQPTD Trigger: GTCTGTGGGCTGAGAATGAGGCGGGTGTAGGGGGCACAGACAGTGTCTGTGTGGCTGATTGGTTGAGGAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CAA 90 bp | CGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTTCACACAGTATGGTaGTTCCATATGGGAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RLFHLLRWSVVSTPSELCLHTVW*FHMGAQ Trigger: CTGGGCTCCCATATGGAACAACCATACTGTGTGAAG...ACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR CCA 72 bp | ATGGAGTTCAGGGCACGGGATTGTCCCTGTGTACAATaGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: MEFRARDCPCVQ*LLGLPVLRDCN Trigger: GTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGACAATCCCGTGCCCTGAACTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCTACATTCCTCAACCAATCAGCCACACAGACACTGTCTGTGCCCCCTACACCTTCACACAGTATGGTaGTTCCATATGGGAGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLHSSTNQPHRHCLCPLHLHTVW*FHMGAQ Trigger: CTGGGCTCCCATATGGAACAACCATACTGTGTGAAG...GTGTAGGGGGCACAGACAGTGTCTGTGTGGCTGATTGGTTGAGGAATGTAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR-3UTR CAA 90 bp | CGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCGGGGTAAGGACAACCTaGCTGATGCTGCCCAACAAT | + |
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Preference number: 3 (lower is better) Translates to: RNWRSGHGTVPVYNGVQGGVRTT*LMLPNN Trigger: ATTGTTGGGCAGCATCAGCAAGGTTGTCCTTACCCC...GCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| 3UTR TCA 72 bp | TGTATTCTAGACCTCAATGATGCTCTGATCACAGAGTaGACTCAAGCACTCAGAGCTGTGGGGCCCGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CILDLNDALITE*TQALRAVGPGG Trigger: TCCACCGGGCCCCACAGCTCTGAGTGCTTGAGTTCACTCTGTGATCAGAGCATCATTGAGGTCTAGAATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR GCA 72 bp | ACTCAGAGCTGTGGGGCCCGGTGGAACAGTTCTCTCTaGCCTGCCGATGAGTCTCTCCAAACTAAAAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: TQSCGARWNSSL*PADESLQTKNK Trigger: TTTATTTTTAGTTTGGAGAGACTCATCGGCAGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGCTCTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR GCA 72 bp | CACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTaGTTCCCCAGAAGGATCCTAACACAGAAGATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: HWSPSFFPLHSF*FPRRILTQKIP Trigger: TGGGATCTTCTGTGTTAGGATCCTTCTGGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR-3UTR CAA 90 bp | GACATGCTTCCTCTGGCCTTAAAGAGAATGAAGTGGATATGTGGGCATAGTCATGGACTGCAACATGAGTaGGAGGGAAGAGCCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DMLPLALKRMKWICGHSHGLQHE*EGRALG Trigger: ACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCC...ATGACTATGCCCACATATCCACTTCATTCTCTTTAAGGCCAGAGGAAGCATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR GCA 72 bp | CAGAGCTGTGTCTCTGTCATGTGGCCATATGGGCTATaGAGAGAGATAGGACTTAGGGTACCAGAACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: QSCVSVMWPYGL*REIGLRVPELP Trigger: AGGAAGTTCTGGTACCCTAAGTCCTATCTCTCTGCATAGCCCATATGGCCACATGACAGAGACACAGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR CCA 72 bp | CTCCATGAGGCTGTTTATGAGCAGGCCCCCAGATTATaGGCCCTCAAGAAAGAGACAAACAGAGATCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: LHEAVYEQAPRL*ALKKETNRDHK Trigger: CTTGTGATCTCTGTTTGTCTCTTTCTTGAGGGCCCATAATCTGGGGGCCTGCTCATAAACAGCCTCATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCCTGTGCTCAGGGACTGCAACATGAGTTGGAGGGAAGAGCCCTGGGTACCACTTTTGCTGTACAGTaGGTGTCTGTTATAATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSCAQGLQHELEGRALGTTFAVQ*VSVIIR Trigger: CCTAATTATAACAGACACCAACTGTACAGCAAAAGT...GGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR TCA 72 bp | GCTGCCTGCCATCTGGAGTTGTATTCTAGACCTCAATaGTGCTCTGATCACAGAGTGAACTCAAGCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AACHLELYSRPQ*CSDHRVNSSTQ Trigger: CTGAGTGCTTGAGTTCACTCTGTGATCAGAGCATCATTGAGGTCTAGAATACAACTCCAGATGGCAGGCAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR CCA 72 bp | CTCCCCATCCTAAAGTCAGCAACCCTTCACACAGTATaGTTGTTCCATATGGGAGCCCAGGTCACAAAATTG | + |
|
Preference number: 3 (lower is better) Translates to: LPILKSATLHTV*LFHMGAQVTKL Trigger: CAATTTTGTGACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAGGATGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR CCA 72 bp | GAGATAGGACTTAGGGTACCAGAACTTCCTGCTCTGTaGTCCCAGGTATCCTCTATCATCAGGTACATGACT | + |
|
Preference number: 3 (lower is better) Translates to: EIGLRVPELPAL*SQVSSIIRYMT Trigger: AGTCATGTACCTGATGATAGAGGATACCTGGGACCACAGAGCAGGAAGTTCTGGTACCCTAAGTCCTATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCAACTTTTGCTGTACAGTaGGTGTCTGTTATAATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VIGDQGMELSLYTMEFRATFAVQ*VSVIIR Trigger: CCTAATTATAACAGACACCAACTGTACAGCAAAAGT...TGCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR GCA 72 bp | GGTGGGAAGCTGTTAGGAGTCCCTAGATATCTAGTTTaGTTGAGAATGTCTATATTAAAAGACCCTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GGKLLGVPRYLV*LRMSILKDPAL Trigger: AAGGGCAGGGTCTTTTAATATAGACATTCTCAAGCAAACTAGATATCTAGGGACTCCTAACAGCTTCCCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR GCA 72 bp | GAATTAAGGATCTCTGTTTGCTTTCATTCACATATCTaGTACATTCCTCAACCAATCAGCCACACAGACACT | + |
|
Preference number: 3 (lower is better) Translates to: ELRISVCFHSHI*YIPQPISHTDT Trigger: AGTGTCTGTGTGGCTGATTGGTTGAGGAATGTAGCAGATATGTGAATGAAAGCAAACAGAGATCCTTAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | ACCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGAAACCTGTCCGAGATaGCCCGCTGACAGCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TTPLPPSQMERSLHPLRAETCPR*PADSPR Trigger: GCGAGGGCTGTCAGCGGGTCATCTCGGACAGGTTTC...AGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR CAA 72 bp | ACTGGGTCTTCCTGTGCTCAGGGACTGCAACATGAGTaGGAGGGAAGAGCCCTGGGTACCTGCCTGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSCAQGLQHE*EGRALGTCLVP Trigger: GGGGACCAGGCAGGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGCCCCCTACACCCGCCTCATTCTCAGCCCACAGACTGGTTCAGGTTTTGGTCCTGTTGCTGTTaGTGCTGTCGCCGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLCPLHPPHSQPTDWFRFWSCCC*CCRRAS Trigger: GCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCA...AAACCTGAACCAGTCTGTGGGCTGAGAATGAGGCGGGTGTAGGGGGCACAGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCCCTCGCAGACAGACTTaGGGCTCACCGCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPPRRQT*GSPLCP Trigger: TGGGCAGAGCGGTGAGCCCCAAGTCTGTCTGCGAGG...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTGGGGCCCGGTGGAACAGTTCTCTCTGCCCTGCCGATGAGTCTCTCCAAAGGCCAGCAGCTGCTGTaGGGTGGGCAACGTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: AVGPGGTVLSALPMSLSKGQQLL*GGQRCI Trigger: TATACAACGTTGCCCACCCCACAGCAGCTGCTGGCC...TTTGGAGAGACTCATCGGCAGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGCCCCCTACACCCGCCTCATTCTCAGCCCACAGACTGGTTCAGGTTTTCTCCAGGGGCTCTTTaGAGGAGGCACACTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: CLCPLHPPHSQPTDWFRFSPGAL*RRHTAR Trigger: GCGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAGA...AAACCTGAACCAGTCTGTGGGCTGAGAATGAGGCGGGTGTAGGGGGCACAGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTGCCCCCTACACCCGCCTCATTCTCAGCCCACAGACTGGTTCAGGTTTTTTCCCACTCTGGACTaGAGGGGCCCAGCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CLCPLHPPHSQPTDWFRFFPTLD*RGPASE Trigger: CTCAGAAGCTGGGCCCCTGCAGTCCAGAGTGGGAAA...AAACCTGAACCAGTCTGTGGGCTGAGAATGAGGCGGGTGTAGGGGGCACAGACA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCCTTTTCCTGCCCCATaGGCTGACTTGCAAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLFHLLRWSVVSTPSELCPFPAP*ADLQRL Trigger: GAGCCTTTGCAAGTCAGCCCATGGGGCAGGAAAAGG...ACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATTCCTGCCCCATGGGCTaGCTTGCAAAGGCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGYLPGPLCFYELHEAVYSCPMG*LAKALL Trigger: GAGGAGAGCCTTTGCAAGTCAGCCCATGGGGCAGGA...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTTGTATAGGGGTTCATaGTCCCTTCCATGCCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRLFHLLRWSVVSTPSELLYRGS*SLPCPH Trigger: ATGCGGGCATGGAAGGGATCATGAACCCCTATACAA...CAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGGGAGGTAGGTGTGGCAACCACCTCATCCACACTCATAGAGAGAGAGAACTCGTCACCCTTCTaGAGCTGTCGCTCACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VPREVGVATTSSTLIERENSSPF*SCRSQT Trigger: CGTCTGTGAGCGACAGCTGCAGAAGGGTGACGAGTT...CTCTCTCTCTATGAGTGTGGATGAGGTGGTTGCCACACCTACCTCCCTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTGTGCTCAGGGACTGCAACATGAGTTGGAGGGAAGAGCCCTGGGTACCAACTCGTCACCCTTCTaGAGCTGTCGCTCACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: SSCAQGLQHELEGRALGTNSSPF*SCRSQT Trigger: CGTCTGTGAGCGACAGCTGCAGAAGGGTGACGAGTT...GGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTGTGCTCAGGGACTGCAACATGAGTTGGAGGGAAGAGCCCTGGGTACCCCTTTGCAGAGCAGCTaGCCCTCCTTCAGGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCAQGLQHELEGRALGTPLQSS*PSFRTN Trigger: GTTTGTCCTGAAGGAGGGCCAGCTGCTCTGCAAAGG...GGTACCCAGGGCTCTTCCCTCCAACTCATGTTGCAGTCCCTGAGCACAGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCGCTGAGTGGTCAGGATaGTTCTGGGACGTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFHLLRWSVVSTPSELCLAEWSG*FWDVWV Trigger: GACCCAAACGTCCCAGAACCATCCTGACCACTCAGC...GAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTGTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATGAGTCCAGGCATCTGGGGTaGGGTGAGACCCTGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLCTMATGSSCAQGLQHESRHLG*GETLSE Trigger: TTCCGACAGGGTCTCACCCCACCCCAGATGCCTGGA...CTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATGCCAGAAGCTGTCGTTaGGCCGCAGCAGAAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGYLPGPLCFYELHEAVYARSCR*AAAETC Trigger: ACAGGTTTCTGCTGCGGCTCAACGACAGCTTCTGGC...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACACTCATCGAGGCTGCAGGGGCCCAGCTTCTaGGGTTGCCAGGAAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRERGRCGYQLHPHSSRLQGPSF*GCQEAV Trigger: GACTGCTTCCTGGCAACCTCAGAAGCTGGGCCCCTG...CAGCCTCGATGAGTGTGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATGAGTTGCAGGAGGCACACTaGACGCATTGCTCGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCTMATGSSCAQGLQHELQEAH*THCSCQ Trigger: CTGGCACGAGCAATGCGTGCAGTGTGCCTCCTGCAA...CTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGCCCCCTACACCCGCCTCATTCTCAGCCCACAGACTGGTTCAGGTTTCAGAAGCAGCTCAGGTaGTATACGCTCTTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLCPLHPPHSQPTDWFRFQKQLR*YTLFWA Trigger: TGCCCAGAAGAGCGTATACCACCTGAGCTGCTTCTG...AAACCTGAACCAGTCTGTGGGCTGAGAATGAGGCGGGTGTAGGGGGCACAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCTGGTTCTGGGACGTTTaGGTCGCTTATGGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFHLLRWSVVSTPSELCLWFWDV*VAYGPC Trigger: GCAAGGACCATAAGCGACCCAAACGTCCCAGAACCA...GAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCCTCTGGGTGTTCTGTTaGTCCTGTTGCTGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFHLLRWSVVSTPSELCLLWVFC*SCCCCC Trigger: GCAGCAACAGCAACAGGACCAACAGAACACCCAGAG...GAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | GTCCCCAGGGAGGTAGGTGTGGCAACCACCTCATCCACACTCATAGAGAGAGAGAGCAGCCCCCACATTTaGCAGCAAACAGTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VPREVGVATTSSTLIERESSPHI*QQTVSR Trigger: ACGAGAAACTGTTTGCTGTCAAATGTGGGGGCTGCT...CTCTCTCTCTATGAGTGTGGATGAGGTGGTTGCCACACCTACCTCCCTGGGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | GTCCCCAGGGAGGTAGGTGTGGCAACCACCTCATCCACACTCATAGAGAGAGAGAAACGAGGCCTTGAATaGTCTCCTCTGCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VPREVGVATTSSTLIEREKRGLE*SPLLSG Trigger: ACCACTCAGCAGAGGAGAGCATTCAAGGCCTCGTTT...CTCTCTCTCTATGAGTGTGGATGAGGTGGTTGCCACACCTACCTCCCTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCTCTCCCTCACCTTTCTaGAGGGCTTGGAGGATACTT | + |
|
Preference number: 4 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPSPSPF*RAWRIL Trigger: AAGTATCCTCCAAGCCCTGCAGAAAGGTGAGGGAGA...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGCACCGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTGGTCCTGTTGCTGTTaGTGCTGTCGCCGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVIGDQGMELSLYTMEWSCCC*CCRRAS Trigger: GCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCA...CTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACGGTGCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATGAGTTCTGTTGGTCCTGTTaGTGTTGCTGCTGTCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLCTMATGSSCAQGLQHEFCWSC*CCCCRR Trigger: CCGGCGACAGCAGCAACAGCAACAGGACCAACAGAA...CTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTCACAAAATCCTCGCAGACAGACTTaGGGCTCACCGCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QQPFTQYGCSIWEPRSQNPRRQT*GSPLCP Trigger: TGGGCAGAGCGGTGAGCCCCAAGTCTGTCTGCGAGG...ATTTTGTGACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCACTCATTGGGCGCAATaGCCTCGAAGCAGCCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNWRSGHGTVPVYNGVQGTHWAQ*PRSSPH Trigger: GTGGGGGCTGCTTCGAGGCCATTGCGCCCAATGAGT...GCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGCCCCCTACACCCGCCTCATTCTCAGCCCACAGACTGGTTCAGGTTTTGGTCAGGATGGTTCTaGGACGTTTGGGTCGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLCPLHPPHSQPTDWFRFWSGWF*DVWVAY Trigger: ATAAGCGACCCAAACGTCCCAGAACCATCCTGACCA...AAACCTGAACCAGTCTGTGGGCTGAGAATGAGGCGGGTGTAGGGGGCACAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | GTCCCCAGGGAGGTAGGTGTGGCAACCACCTCATCCACACTCATAGAGAGAGAGTGGTCAGGATGGTTCTaGGACGTTTGGGTCGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VPREVGVATTSSTLIEREWSGWF*DVWVAY Trigger: ATAAGCGACCCAAACGTCCCAGAACCATCCTGACCA...CTCTCTCTCTATGAGTGTGGATGAGGTGGTTGCCACACCTACCTCCCTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | GTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCATCCTGCCCCATGGGCTaGCTTGCAAAGGCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIGDQGMELSLYTMEFRASCPMG*LAKALL Trigger: GAGGAGAGCCTTTGCAAGTCAGCCCATGGGGCAGGA...TGCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCCAAAGAGGAGAAAGATaGCGAGGTCTCAATCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LFHLLRWSVVSTPSELCLQRGER*RGLNRT Trigger: AGTGCGATTGAGACCTCGGCATCTTTCTCCTCTTTG...GAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTAAACAACAGCATCCCCAACAAACCTCCCTCCCCAGCCCACCTCTTCTCTTGCAGGAGGCACACTaGACGCATTGCTCGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIKQQHPQQTSLPSPPLLLQEAH*THCSCQ Trigger: CTGGCACGAGCAATGCGTGCAGTGTGCCTCCTGCAA...GAGAAGAGGTGGGCTGGGGAGGGAGGTTTGTTGGGGATGCTGTTGTTTAATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGTCTCCAGGGGCTCTTTaGAGGAGGCACACTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: NTCSRIPSTTPLPPSQMESPGAL*RRHTAR Trigger: GCGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAGA...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCTCTCGTAGTGGTACTTaGAGTAGAGCTTCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPSRSGT*SRASCP Trigger: GGGACAAGAAGCTCTACTGCAAGTACCACTACGAGA...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTGTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATGAGCCCCATGGGCTGACTTaGAAAGGCTCTCCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLCTMATGSSCAQGLQHEPHGLT*KGSPHH Trigger: ATGATGAGGAGAGCCTTTGCAAGTCAGCCCATGGGG...CTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTAAACAACAGCATCCCCAACAAACCTCCCTCCCCAGCCCACCTCTTCTCTTTCCCACTCTGGACTaGAGGGGCCCAGCTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IIKQQHPQQTSLPSPPLLFPTLD*RGPASE Trigger: CTCAGAAGCTGGGCCCCTGCAGTCCAGAGTGGGAAA...GAGAAGAGGTGGGCTGGGGAGGGAGGTTTGTTGGGGATGCTGTTGTTTAATTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTCACAAAATCCCGGTAGAAGCAGGTaGTCTCCAGGGGCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQPFTQYGCSIWEPRSQNPGRSR*SPGALC Trigger: GCAAAGAGCCCCTGGAGACCACCTGCTTCTACCGGG...ATTTTGTGACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGCCCGGTAGAAGCAGGTaGTCTCCAGGGGCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTCSRIPSTTPLPPSQMEPGRSR*SPGALC Trigger: GCAAAGAGCCCCTGGAGACCACCTGCTTCTACCGGG...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGATAGGACTTAGGGTACCAGAACTTCCTGCTCTGTGGTCCCAGGTATCCGCTGAGTGGTCAGGATaGTTCTGGGACGTTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: REIGLRVPELPALWSQVSAEWSG*FWDVWV Trigger: GACCCAAACGTCCCAGAACCATCCTGACCACTCAGC...GGATACCTGGGACCACAGAGCAGGAAGTTCTGGTACCCTAAGTCCTATCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTACATTCCTCAACCAATCAGCCACACAGACACTGTCTGTGCCCCCTACACCTCTGGGTGTTCTGTTaGTCCTGTTGCTGTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLHSSTNQPHRHCLCPLHLWVFC*SCCCCC Trigger: GCAGCAACAGCAACAGGACCAACAGAACACCCAGAG...GTGTAGGGGGCACAGACAGTGTCTGTGTGGCTGATTGGTTGAGGAATGTAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTTCCTGCTCTGTGGTCCCAGGTATCCTCTATCATCAGGTACATGACTCGGGCCAGCAGCTGCTGTaGGGTGGGCAACGTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: RTSCSVVPGILYHQVHDSGQQLL*GGQRCI Trigger: TATACAACGTTGCCCACCCCACAGCAGCTGCTGGCC...CGAGTCATGTACCTGATGATAGAGGATACCTGGGACCACAGAGCAGGAAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGTCCAGGCATCTGGGGTaGGGTGAGACCCTGTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTCSRIPSTTPLPPSQMESRHLG*GETLSE Trigger: TTCCGACAGGGTCTCACCCCACCCCAGATGCCTGGA...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | ACAACCTTGCTGATGCTGCCCAACAATCCCATGCCAATAAGCCTAAAATCTCATGAAACCTGTCCGAGATaGCCCGCTGACAGCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TTLLMLPNNPMPISLKSHETCPR*PADSPR Trigger: GCGAGGGCTGTCAGCGGGTCATCTCGGACAGGTTTC...ATGAGATTTTAGGCTTATTGGCATGGGATTGTTGGGCAGCATCAGCAAGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTTTCTGGAACCACACCTaGACCACACGGACACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKVSNPSHSMVVPYGSPGFWNHT*TTRTLS Trigger: GCTGAGTGTCCGTGTGGTTCAGGTGTGGTTCCAGAA...ACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | GACATGCTTCCTCTGGCCTTAAAGAGAATGAAGTGGATATGTGGGCATAGTCATCAGGGGCCCAGCTTCTaGGGTTGCCAGGAAGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DMLPLALKRMKWICGHSHQGPSF*GCQEAV Trigger: GACTGCTTCCTGGCAACCTCAGAAGCTGGGCCCCTG...ATGACTATGCCCACATATCCACTTCATTCTCTTTAAGGCCAGAGGAAGCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTTGCACGCATTGCTCGTaGCAGAAGCTGTCGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PKVSNPSHSMVVPYGSPGCTHCS*QKLSLS Trigger: GCTCAACGACAGCTTCTGGCACGAGCAATGCGTGCA...ACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | AGAACTTCCTGCTCTGTGGTCCCAGGTATCCTCTATCATCAGGTACATGACTCGTGCACGCATTGCTCGTaGCAGAAGCTGTCGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTSCSVVPGILYHQVHDSCTHCS*QKLSLS Trigger: GCTCAACGACAGCTTCTGGCACGAGCAATGCGTGCA...CGAGTCATGTACCTGATGATAGAGGATACCTGGGACCACAGAGCAGGAAGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCATCCACACTCATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCAGCAGCTGCTGTGGGGTaGGCAACGTTGTATAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HLIHTHRERGRCGYQLHPAAAVG*ATLYRG Trigger: ACCCCTATACAACGTTGCCCACCCCACAGCAGCTGC...TGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATGAGTGTGGATGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACACTCATCGAGGCTGTCTTCTGGGCACGCATaGCAAACTCATTGGGCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HRERGRCGYQLHPHSSRLSSGHA*QTHWAQ Trigger: TTGCGCCCAATGAGTTTGTCATGCGTGCCCAGAAGA...CAGCCTCGATGAGTGTGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGTTCTGGAACCACACCTaGACCACACGGACACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NTCSRIPSTTPLPPSQMEFWNHT*TTRTLS Trigger: GCTGAGTGTCCGTGTGGTTCAGGTGTGGTTCCAGAA...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CCTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTCCACTACCATTTGTCTaGGCAGAAGTCAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKVSNPSHSMVVPYGSPGPLPFV*AEVSLW Trigger: CCAGAGGCTGACTTCTGCTCAGACAAATGGTAGTGG...ACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTAAACAACAGCATCCCCAACAAACCTCCCTCCCCAGCCCACCTCTTCTCCCCCATGGGCTGACTTaGAAAGGCTCTCCTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIKQQHPQQTSLPSPPLLPHGLT*KGSPHH Trigger: ATGATGAGGAGAGCCTTTGCAAGTCAGCCCATGGGG...GAGAAGAGGTGGGCTGGGGAGGGAGGTTTGTTGGGGATGCTGTTGTTTAATTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGTTCTGTTGGTCCTGTTaGTGTTGCTGCTGTCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: NTCSRIPSTTPLPPSQMEFCWSC*CCCCRR Trigger: CCGGCGACAGCAGCAACAGCAACAGGACCAACAGAA...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACACTCATCGAGGCTGCAGAAGCAGCTCAGGTaGTATACGCTCTTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HRERGRCGYQLHPHSSRLQKQLR*YTLFWA Trigger: TGCCCAGAAGAGCGTATACCACCTGAGCTGCTTCTG...CAGCCTCGATGAGTGTGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCATCCACACTCATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACCTTTGCAGAGCAGCTaGCCCTCCTTCAGGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HLIHTHRERGRCGYQLHPPLQSS*PSFRTN Trigger: GTTTGTCCTGAAGGAGGGCCAGCTGCTCTGCAAAGG...TGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATGAGTGTGGATGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTCACAAAATCCTTTTCCTGCCCCATaGGCTGACTTGCAAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQPFTQYGCSIWEPRSQNPFPAP*ADLQRL Trigger: GAGCCTTTGCAAGTCAGCCCATGGGGCAGGAAAAGG...ATTTTGTGACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACACTCATCGAGGCTGTGGTTCTGGGACGTTTaGGTCGCTTATGGTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRERGRCGYQLHPHSSRLWFWDV*VAYGPC Trigger: GCAAGGACCATAAGCGACCCAAACGTCCCAGAACCA...CAGCCTCGATGAGTGTGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCGCAGAAGTCAGCCTCTaGGTGTTCTGTTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RNWRSGHGTVPVYNGVQGAEVSL*VFCWSC Trigger: ACAGGACCAACAGAACACCCAGAGGCTGACTTCTGC...GCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATAGTACAGATGGTCAATaGGGTTTCCCACTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PGYLPGPLCFYELHEAVYSTDGQ*GFPLWT Trigger: AGTCCAGAGTGGGAAACCCCATTGACCATCTGTACT...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR CAA 72 bp | ACTGTCCCTGTATACAATGGAGTTCAGGGCACGGGATaGTCCCTGTGTACAATGGCTACTGGGTCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TVPVYNGVQGTG*SLCTMATGSSC Trigger: ACAGGAAGACCCAGTAGCCATTGTACACAGGGACAATCCCGTGCCCTGAACTCCATTGTATACAGGGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATGTCTCAATCGCACTTTaGAAGTTCTCCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGYLPGPLCFYELHEAVYVSIAL*KFSSIF Trigger: GAAGATGGAGGAGAACTTTCAAAGTGCGATTGAGAC...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGCACCGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTCTTCTGGGCACGCATaGCAAACTCATTGGGCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTVIGDQGMELSLYTMESSGHA*QTHWAQ Trigger: TTGCGCCCAATGAGTTTGTCATGCGTGCCCAGAAGA...CTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACGGTGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGCACCGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGCCACTACCATTTGTCTaGGCAGAAGTCAGCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTVIGDQGMELSLYTMEPLPFV*AEVSLW Trigger: CCAGAGGCTGACTTCTGCTCAGACAAATGGTAGTGG...CTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACGGTGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | ACAACCTTGCTGATGCTGCCCAACAATCCCATGCCAATAAGCCTAAAATCTCATGCACACTGCACGCATTaGTCGTGCCAGAAGCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TTLLMLPNNPMPISLKSHAHCTH*SCQKLS Trigger: CGACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGC...ATGAGATTTTAGGCTTATTGGCATGGGATTGTTGGGCAGCATCAGCAAGGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | CCTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTAAACGAGGCCTTGAATaGTCTCCTCTGCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKVSNPSHSMVVPYGSPGKRGLE*SPLLSG Trigger: ACCACTCAGCAGAGGAGAGCATTCAAGGCCTCGTTT...ACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | TATCTGCTACATTCCTCAACCAATCAGCCACACAGACACTGTCTGTGCCCCCTATCTCCCTCACCTTTCTaGAGGGCTTGGAGGATACTT | + |
|
Preference number: 4 (lower is better) Translates to: YLLHSSTNQPHRHCLCPLSPSPF*RAWRIL Trigger: AAGTATCCTCCAAGCCCTGCAGAAAGGTGAGGGAGA...TAGGGGGCACAGACAGTGTCTGTGTGGCTGATTGGTTGAGGAATGTAGCAGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGCACCGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGGCAGAAGTCAGCCTCTaGGTGTTCTGTTGGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTVIGDQGMELSLYTMEAEVSL*VFCWSC Trigger: ACAGGACCAACAGAACACCCAGAGGCTGACTTCTGC...CTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACGGTGCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | GACATGCTTCCTCTGGCCTTAAAGAGAATGAAGTGGATATGTGGGCATAGTCATGCAGCTGCTGTGGGGTaGGCAACGTTGTATAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DMLPLALKRMKWICGHSHAAAVG*ATLYRG Trigger: ACCCCTATACAACGTTGCCCACCCCACAGCAGCTGC...ATGACTATGCCCACATATCCACTTCATTCTCTTTAAGGCCAGAGGAAGCATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCAATAGGAATTCTGCATaGAGTACAGATGGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPNRNSA*STDGQW Trigger: CCATTGACCATCTGTACTCCATGCAGAATTCCTATT...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | GTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCAAGCAGCCCCCACATTTaGCAGCAAACAGTTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VIGDQGMELSLYTMEFRASSPHI*QQTVSR Trigger: ACGAGAAACTGTTTGCTGTCAAATGTGGGGGCTGCT...TGCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGTTGTATAGGGGTTCATaGTCCCTTCCATGCCCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTCSRIPSTTPLPPSQMELYRGS*SLPCPH Trigger: ATGCGGGCATGGAAGGGATCATGAACCCCTATACAA...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | ATAATTAAACAACAGCATCCCCAACAAACCTCCCTCCCCAGCCCACCTCTTCTCCAAAGAGGAGAAAGATaGCGAGGTCTCAATCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IIKQQHPQQTSLPSPPLLQRGER*RGLNRT Trigger: AGTGCGATTGAGACCTCGGCATCTTTCTCCTCTTTG...GAGAAGAGGTGGGCTGGGGAGGGAGGTTTGTTGGGGATGCTGTTGTTTAATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR GCA 90 bp | AACACTTGTTCTAGAATTCCATCCACCACGCCTCTTCCACCTTCTCAGATGGAGTCTCGTAGTGGTACTTaGAGTAGAGCTTCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NTCSRIPSTTPLPPSQMESRSGT*SRASCP Trigger: GGGACAAGAAGCTCTACTGCAAGTACCACTACGAGA...CTCCATCTGAGAAGGTGGAAGAGGCGTGGTGGATGGAATTCTAGAACAAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CACCTCATCCACACTCATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCAAGTACAGATGGTCAATaGGGTTTCCCACTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: HLIHTHRERGRCGYQLHPSTDGQ*GFPLWT Trigger: AGTCCAGAGTGGGAAACCCCATTGACCATCTGTACT...TGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATGAGTGTGGATGAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR TCA 90 bp | TCTAGCACCGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGGTCTCAATCGCACTTTaGAAGTTCTCCTCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTVIGDQGMELSLYTMEVSIAL*KFSSIF Trigger: GAAGATGGAGGAGAACTTTCAAAGTGCGATTGAGAC...CTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACGGTGCTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | CATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACACTCATCGAGGCTGTCACTATCCAAGTCATaGAAAAGAGGTTCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HRERGRCGYQLHPHSSRLSLSKS*KRGSAP Trigger: TGGTGCTGAACCTCTTTTCCATGACTTGGATAGTGA...CAGCCTCGATGAGTGTGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | ACAACCTTGCTGATGCTGCCCAACAATCCCATGCCAATAAGCCTAAAATCTCATTCACTATCCAAGTCATaGAAAAGAGGTTCAGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TTLLMLPNNPMPISLKSHSLSKS*KRGSAP Trigger: TGGTGCTGAACCTCTTTTCCATGACTTGGATAGTGA...ATGAGATTTTAGGCTTATTGGCATGGGATTGTTGGGCAGCATCAGCAAGGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CCA 90 bp | ACAACCTTGCTGATGCTGCCCAACAATCCCATGCCAATAAGCCTAAAATCTCATAATAGGAATTCTGCATaGAGTACAGATGGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: TTLLMLPNNPMPISLKSHNRNSA*STDGQW Trigger: CCATTGACCATCTGTACTCCATGCAGAATTCCTATT...ATGAGATTTTAGGCTTATTGGCATGGGATTGTTGGGCAGCATCAGCAAGGTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| 3UTR CAA 72 bp | GGGAAGCTGTTAGGAGTCCCTAGATATCTAGTTTGCTaGAGAATGTCTATATTAAAAGACCCTGCCCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GKLLGVPRYLVC*RMSILKDPALN Trigger: ATTAAGGGCAGGGTCTTTTAATATAGACATTCTCAAGCAAACTAGATATCTAGGGACTCCTAACAGCTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGGGCCCGGTGGAACAGTTCTCTCTGCCCTGCCGATGAGTCTCTCCAAACCCTCGCAGACAGACTaGGGGCTCACCGCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AVGPGGTVLSALPMSLSKPSQTD*GLTALP Trigger: GGGCAGAGCGGTGAGCCCCAAGTCTGTCTGCGAGGG...TTTGGAGAGACTCATCGGCAGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS GCA 90 bp | CAGGTGGTCTCCAGGGGCTCTTTGCAGGAGGCACACTGCACGCATTaGTCGTGCCAGAAGCTGTCGTTGAGCCGCAGCAGAAACCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVVSRGSLQEAHCTH*SCQKLSLSRSRNLS Trigger: GGACAGGTTTCTGCTGCGGCTCAACGACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAGACCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | ACCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTCTCCAGGGGCTCTTaGCAGGAGGCACACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: TTPLPPSQMERSLHPLRAVSRGS*QEAHCT Trigger: CGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAGAC...AGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | ACCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTTTGGTCCTGTTGCTGTaGCTGCTGTCGCCGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTPLPPSQMERSLHPLRALVLLL*LLSPGQ Trigger: CTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAA...AGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGGCCCAGCTTCTGAGGTaGCCAGGAAGCAGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PRLFHLLRWSVVSTPSELAQLLR*PGSSLP Trigger: TGGGAGACTGCTTCCTGGCAACCTCAGAAGCTGGGC...CAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGCCAGAAGCTGTCGTaGAGCCGCAGCAGAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRLFHLLRWSVVSTPSELCQKLS*SRSRNL Trigger: CAGGTTTCTGCTGCGGCTCAACGACAGCTTCTGGCA...CAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTGCCCAGCTTCTGAGGTaGCCAGGAAGCAGTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLFHLLRWSVVSTPSELCAQLLR*PGSSLP Trigger: TGGGAGACTGCTTCCTGGCAACCTCAGAAGCTGGGC...ACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS GCA 90 bp | AGAGCTTCTTGTCCCGGTAGAAGCAGGTGGTCTCCAGGGGCTCTTTaGAGGAGGCACACTGCACGCATTGCTCGTGCCAGAAGCTGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RASCPGRSRWSPGAL*RRHTARIARARSCR Trigger: ACGACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAGACCACCTGCTTCTACCGGGACAAGAAGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS GCA 90 bp | GCAGAAGTCAGCCTCTGGGTGTTCTGTTGGTCCTGTTGCTGTTGCTaGTGTCGCCGGGCCAGCTTCTTCATCTTGGCTCGCTGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AEVSLWVFCWSCCCC*CRRASFFILARWFW Trigger: CCAGAACCAGCGAGCCAAGATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCTGACTTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CATAGAGAGAGAGGTAGGTGTGGCTATCAACTTCATCCACACTCATCGAGGCTGCCCTCGCAGACAGACTaGGGGCTCACCGCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HRERGRCGYQLHPHSSRLPSQTD*GLTALP Trigger: GGGCAGAGCGGTGAGCCCCAAGTCTGTCTGCGAGGG...CAGCCTCGATGAGTGTGGATGAAGTTGATAGCCACACCTACCTCTCTCTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCTGCCAGAAGCTGTCGTaGAGCCGCAGCAGAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFHLLRWSVVSTPSELCLCQKLS*SRSRNL Trigger: CAGGTTTCTGCTGCGGCTCAACGACAGCTTCTGGCA...GAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATGTCTCCAGGGGCTCTTaGCAGGAGGCACACTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: PGYLPGPLCFYELHEAVYVSRGS*QEAHCT Trigger: CGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAGAC...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGTGTCTCGCCCCATGGGCTGACTaGCAAAGGCTCTCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LFHLLRWSVVSTPSELCLAPWAD*QRLSSS Trigger: TGATGAGGAGAGCCTTTGCAAGTCAGCCCATGGGGC...GAGACACAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGATGGTTCTGGGACGTTaGGGTCGCTTATGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRLFHLLRWSVVSTPSELMVLGR*GRLWSL Trigger: CAAGGACCATAAGCGACCCAAACGTCCCAGAACCAT...CAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS TCA 90 bp | TGGCCAGCAGCTGCTGTGGGGTGGGCAACGTTGTATAGGGGTTCATaGTCCCTTCCATGCCCGCATTCCCACTACCATTTGTCTGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WPAAAVGWATLYRGS*SLPCPHSHYHLSEQ Trigger: CTGCTCAGACAAATGGTAGTGGGAATGCGGGCATGGAAGGGATCATGAACCCCTATACAACGTTGCCCACCCCACAGCAGCTGCTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATGGCACACTGCACGCATaGCTCGTGCCAGAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGYLPGPLCFYELHEAVYGTLHA*LVPEAV Trigger: GACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGCC...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTGAAGCAGCCCCCACATTaGACAGCAAACAGTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRLFHLLRWSVVSTPSELKQPPH*TANSFS Trigger: CGAGAAACTGTTTGCTGTCAAATGTGGGGGCTGCTT...CAGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTGGGGCCCGGTGGAACAGTTCTCTCTGCCCTGCCGATGAGTCTCTCCAAAACCTTTCTGCAGGGCTaGGAGGATACTTCAAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: AVGPGGTVLSALPMSLSKTFLQG*EDTSNE Trigger: CTCGTTTGAAGTATCCTCCAAGCCCTGCAGAAAGGT...TTTGGAGAGACTCATCGGCAGGGCAGAGAGAACTGTTCCACCGGGCCCCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | GTCCCCAGGGAGGTAGGTGTGGCAACCACCTCATCCACACTCATAGAGAGAGAGCCTCTGGGTGTTCTGTaGGTCCTGTTGCTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPREVGVATTSSTLIEREPLGVL*VLLLLL Trigger: CAGCAACAGCAACAGGACCAACAGAACACCCAGAGG...CTCTCTCTCTATGAGTGTGGATGAGGTGGTTGCCACACCTACCTCCCTGGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCCCTCTGGGTGTTCTGTaGGTCCTGTTGCTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPPLGVL*VLLLLL Trigger: CAGCAACAGCAACAGGACCAACAGAACACCCAGAGG...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS CCA 90 bp | GGGATCAGAGTTGTAGACGCTCTGTTCAATGGCCAGCAGCTGCTGTaGGGTGGGCAACGTTGTATAGGGGTTCATGATCCCTTCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GIRVVDALFNGQQLL*GGQRCIGVHDPFHA Trigger: GGCATGGAAGGGATCATGAACCCCTATACAACGTTGCCCACCCCACAGCAGCTGCTGGCCATTGAACAGAGCGTCTACAACTCTGATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTGTGTACAATGGCTACTGGGTCTTCCTGTGCTCAGGGACTGCAACATGAGGCCCCATGGGCTGACTaGCAAAGGCTCTCCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SLCTMATGSSCAQGLQHEAPWAD*QRLSSS Trigger: TGATGAGGAGAGCCTTTGCAAGTCAGCCCATGGGGC...CTCATGTTGCAGTCCCTGAGCACAGGAAGACCCAGTAGCCATTGTACACAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | ACCACGCCTCTTCCACCTTCTCAGATGGAGCGTAGTCTCCACCCCCTCAGAGCTACCTTTCTGCAGGGCTaGGAGGATACTTCAAACGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTPLPPSQMERSLHPLRATFLQG*EDTSNE Trigger: CTCGTTTGAAGTATCCTCCAAGCCCTGCAGAAAGGT...AGCTCTGAGGGGGTGGAGACTACGCTCCATCTGAGAAGGTGGAAGAGGCGTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTCGGCACACTGCACGCATaGCTCGTGCCAGAAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKSATLHTVWLFHMGAQVGTLHA*LVPEAV Trigger: GACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGCC...GACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTCTCACTGGAGCCCTTCTTTCTTCCCCCTACACTCATTCTGCTTCCCCCATTCCCACTACCATTaGTCTGAGCAGAAGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSHWSPSFFPLHSFCFPHSHYH*SEQKSA Trigger: GGCTGACTTCTGCTCAGACAAATGGTAGTGGGAATG...GGGGAAGCAGAATGAGTGTAGGGGGAAGAAAGAAGGGCTCCAGTGAGAGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS TCA 90 bp | GGGTTCATGATCCCTTCCATGCCCGCATTCCCACTACCATTTGTCTaGGCAGAAGTCAGCCTCTGGGTGTTCTGTTGGTCCTGTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFMIPSMPAFPLPFV*AEVSLWVFCWSCCC Trigger: ACAGCAACAGGACCAACAGAACACCCAGAGGCTGACTTCTGCTCAGACAAATGGTAGTGGGAATGCGGGCATGGAAGGGATCATGAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATATGGTTCTGGGACGTTaGGGTCGCTTATGGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGYLPGPLCFYELHEAVYMVLGR*GRLWSL Trigger: CAAGGACCATAAGCGACCCAAACGTCCCAGAACCAT...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CGTAATTGGAGATCAGGGCATGGAACTGTCCCTGTATACAATGGAGTTCAGGGCGTTCTGTTGGTCCTGTaGCTGTTGCTGCTGTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RNWRSGHGTVPVYNGVQGVLLVL*LLLLSP Trigger: CGGCGACAGCAGCAACAGCAACAGGACCAACAGAAC...GCCCTGAACTCCATTGTATACAGGGACAGTTCCATGCCCTGATCTCCAATTACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS TCA 90 bp | GGGGCCCAGCTTCTGAGGTTGCCAGGAAGCAGTCTCCCAGGTTACTaGGAGATGTGTCATCACTATCCAAGTCATGGAAAAGAGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GAQLLRLPGSSLPGY*EMCHHYPSHGKEVQ Trigger: CTGAACCTCTTTTCCATGACTTGGATAGTGATGACACATCTCTCAGTAACCTGGGAGACTGCTTCCTGGCAACCTCAGAAGCTGGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATAAGCAGCCCCCACATTaGACAGCAAACAGTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGYLPGPLCFYELHEAVYKQPPH*TANSFS Trigger: CGAGAAACTGTTTGCTGTCAAATGTGGGGGCTGCTT...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTCGCATGACAAACTCATaGGGCGCAATGGCCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PKVSNPSHSMVVPYGSPGRMTNS*GAMASK Trigger: CTTCGAGGCCATTGCGCCCAATGAGTTTGTCATGCG...ACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTCCGCATGACAAACTCATaGGGCGCAATGGCCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSATLHTVWLFHMGAQVRMTNS*GAMASK Trigger: CTTCGAGGCCATTGCGCCCAATGAGTTTGTCATGCG...GACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | ACAACCTTGCTGATGCTGCCCAACAATCCCATGCCAATAAGCCTAAAATCTCATTTGGTCCTGTTGCTGTaGCTGCTGTCGCCGGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTLLMLPNNPMPISLKSHLVLLL*LLSPGQ Trigger: CTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAA...ATGAGATTTTAGGCTTATTGGCATGGGATTGTTGGGCAGCATCAGCAAGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGGTACCTGCCTGGTCCCCTCTGCTTCTATGAACTCCATGAGGCTGTTTATCATTCCCACTACCATTaGTCTGAGCAGAAGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGYLPGPLCFYELHEAVYHSHYH*SEQKSA Trigger: GGCTGACTTCTGCTCAGACAAATGGTAGTGGGAATG...ATAAACAGCCTCATGGAGTTCATAGAAGCAGAGGGGACCAGGCAGGTACCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | ACAACCTTGCTGATGCTGCCCAACAATCCCATGCCAATAAGCCTAAAATCTCATGTTCTGTTGGTCCTGTaGCTGTTGCTGCTGTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TTLLMLPNNPMPISLKSHVLLVL*LLLLSP Trigger: CGGCGACAGCAGCAACAGCAACAGGACCAACAGAAC...ATGAGATTTTAGGCTTATTGGCATGGGATTGTTGGGCAGCATCAGCAAGGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS-3UTR CAA 90 bp | CCTAAAGTCAGCAACCCTTCACACAGTATGGTTGTTCCATATGGGAGCCCAGGTGGTCTCAATCGCACTTaGAAAGTTCTCCTCCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PKVSNPSHSMVVPYGSPGGLNRT*KVLLHL Trigger: AAGATGGAGGAGAACTTTCAAAGTGCGATTGAGACC...ACCTGGGCTCCCATATGGAACAACCATACTGTGTGAAGGGTTGCTGACTTTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS CAA 72 bp | CTCCAGGGGCTCTTTGCAGGAGGCACACTGCACGCATaGCTCGTGCCAGAAGCTGTCGTTGAGCCGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQGLFAGGTLHA*LVPEAVVEPQQ Trigger: CTGCTGCGGCTCAACGACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS GCA 72 bp | TCCAGGGGCTCTTTGCAGGAGGCACACTGCACGCATTaGTCGTGCCAGAAGCTGTCGTTGAGCCGCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SRGSLQEAHCTH*SCQKLSLSRSR Trigger: TCTGCTGCGGCTCAACGACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS GCA 72 bp | TGTCCCGGTAGAAGCAGGTGGTCTCCAGGGGCTCTTTaGAGGAGGCACACTGCACGCATTGCTCGTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CPGRSRWSPGAL*RRHTARIARAR Trigger: TCTGGCACGAGCAATGCGTGCAGTGTGCCTCCTGCAAAGAGCCCCTGGAGACCACCTGCTTCTACCGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
||
| CDS CAA 72 bp | GCACACTGCACGCATTGCTCGTGCCAGAAGCTGTCGTaGAGCCGCAGCAGAAACCTGTCCGAGATGACCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AHCTHCSCQKLS*SRSRNLSEMTR Trigger: GCGGGTCATCTCGGACAGGTTTCTGCTGCGGCTCAACGACAGCTTCTGGCACGAGCAATGCGTGCAGTGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS GCA 72 bp | GACAGCCCTCGCAGACAGACTTGGGGCTCACCGCTCTaGCCAGCAAAGAGGAGAAAGATGCCGAGGTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: DSPRRQTWGSPL*PAKRRKMPRSQ Trigger: TTGAGACCTCGGCATCTTTCTCCTCTTTGCTGGGCAGAGCGGTGAGCCCCAAGTCTGTCTGCGAGGGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS GCA 72 bp | AGCCTCTGGGTGTTCTGTTGGTCCTGTTGCTGTTGCTaGTGTCGCCGGGCCAGCTTCTTCATCTTGGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: SLWVFCWSCCCC*CRRASFFILAR Trigger: GCGAGCCAAGATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CAA 90 bp | CTGAGCAGAAGTCAGCCTCTGGGTGTTCTGTTGGTCCTGTTGCTGTaGCTGCTGTCGCCGGGCCAGCTTCTTCATCTTGGCTCGCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LSRSQPLGVLLVLLL*LLSPGQLLHLGSLV Trigger: AACCAGCGAGCCAAGATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCTGACTTCTGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS GCA 72 bp | GTCAGCCTCTGGGTGTTCTGTTGGTCCTGTTGCTGTTaGTGCTGTCGCCGGGCCAGCTTCTTCATCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VSLWVFCWSCCC*CCRRASFFILA Trigger: AGCCAAGATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS GCA 72 bp | GAGTACAGATGGTCAATGGGGTTTCCCACTCTGGACTaGAGGGGCCCAGCTTCTGAGGTTGCCAGGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: EYRWSMGFPTLD*RGPASEVARKQ Trigger: CTGCTTCCTGGCAACCTCAGAAGCTGGGCCCCTGCAGTCCAGAGTGGGAAACCCCATTGACCATCTGTACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CAA 72 bp | AGTCAGCCTCTGGGTGTTCTGTTGGTCCTGTTGCTGTaGCTGCTGTCGCCGGGCCAGCTTCTTCATCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SQPLGVLLVLLL*LLSPGQLLHLG Trigger: GCCAAGATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS TCA 72 bp | AGCAGCTCAGGTGGTATACGCTCTTCTGGGCACGCATaGCAAACTCATTGGGCGCAATGGCCTCGAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSGGIRSSGHA*QTHWAQWPRSS Trigger: GCTGCTTCGAGGCCATTGCGCCCAATGAGTTTGTCATGCGTGCCCAGAAGAGCGTATACCACCTGAGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CCA 72 bp | GTGGTCAGGATGGTTCTGGGACGTTTGGGTCGCTTATaGTCCTTGCCGTCCTCTGATGCTCCTTTTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VVRMVLGRLGRL*SLPSSDAPFPA Trigger: GGCAGGAAAAGGAGCATCAGAGGACGGCAAGGACCATAAGCGACCCAAACGTCCCAGAACCATCCTGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CCA 72 bp | TCCTCTGCTGAGTGGTCAGGATGGTTCTGGGACGTTTaGGTCGCTTATGGTCCTTGCCGTCCTCTGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: SSAEWSGWFWDV*VAYGPCRPLML Trigger: GAGCATCAGAGGACGGCAAGGACCATAAGCGACCCAAACGTCCCAGAACCATCCTGACCACTCAGCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CAA 72 bp | AGCAGAAGTCAGCCTCTGGGTGTTCTGTTGGTCCTGTaGCTGTTGCTGCTGTCGCCGGGCCAGCTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SRSQPLGVLLVL*LLLLSPGQLLH Trigger: ATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCTGACTTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CAA 90 bp | CAGCTCAGGTGGTATACGCTCTTCTGGGCACGCATGACAAACTCATaGGGCGCAATGGCCTCGAAGCAGCCCCCACATTTGACAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: QLRWYTLFWARMTNS*GAMASKQPPHLTAN Trigger: GTTTGCTGTCAAATGTGGGGGCTGCTTCGAGGCCATTGCGCCCAATGAGTTTGTCATGCGTGCCCAGAAGAGCGTATACCACCTGAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CAA 90 bp | ATTTGTCTGAGCAGAAGTCAGCCTCTGGGTGTTCTGTTGGTCCTGTaGCTGTTGCTGCTGTCGCCGGGCCAGCTTCTTCATCTTGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: ICLSRSQPLGVLLVL*LLLLSPGQLLHLGS Trigger: CGAGCCAAGATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCTGACTTCTGCTCAGACAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CAA 90 bp | CCCACTACCATTTGTCTGAGCAGAAGTCAGCCTCTGGGTGTTCTGTaGGTCCTGTTGCTGTTGCTGCTGTCGCCGGGCCAGCTTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: PTTICLSRSQPLGVL*VLLLLLLSPGQLLH Trigger: ATGAAGAAGCTGGCCCGGCGACAGCAGCAACAGCAACAGGACCAACAGAACACCCAGAGGCTGACTTCTGCTCAGACAAATGGTAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS TCA 72 bp | GCTGCTGTGGGGTGGGCAACGTTGTATAGGGGTTCATaGTCCCTTCCATGCCCGCATTCCCACTACCATTTG | + |
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Preference number: 6 (lower is better) Translates to: AAVGWATLYRGS*SLPCPHSHYHL Trigger: CAAATGGTAGTGGGAATGCGGGCATGGAAGGGATCATGAACCCCTATACAACGTTGCCCACCCCACAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS GCA 72 bp | GGGGCTCACCGCTCTGCCCAGCAAAGAGGAGAAAGATaGCGAGGTCTCAATCGCACTTTGAAAGTTCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAHRSAQQRGER*RGLNRTLKVLL Trigger: GAGGAGAACTTTCAAAGTGCGATTGAGACCTCGGCATCTTTCTCCTCTTTGCTGGGCAGAGCGGTGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CCA 72 bp | GTTGTAGACGCTCTGTTCAATGGCCAGCAGCTGCTGTaGGGTGGGCAACGTTGTATAGGGGTTCATGATCCC | + |
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Preference number: 6 (lower is better) Translates to: VVDALFNGQQLL*GGQRCIGVHDP Trigger: GGGATCATGAACCCCTATACAACGTTGCCCACCCCACAGCAGCTGCTGGCCATTGAACAGAGCGTCTACAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS CAA 72 bp | TGGTATACGCTCTTCTGGGCACGCATGACAAACTCATaGGGCGCAATGGCCTCGAAGCAGCCCCCACATTTG | + |
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Preference number: 6 (lower is better) Translates to: WYTLFWARMTNS*GAMASKQPPHL Trigger: CAAATGTGGGGGCTGCTTCGAGGCCATTGCGCCCAATGAGTTTGTCATGCGTGCCCAGAAGAGCGTATACCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS TCA 72 bp | ATCCCTTCCATGCCCGCATTCCCACTACCATTTGTCTaGGCAGAAGTCAGCCTCTGGGTGTTCTGTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: IPSMPAFPLPFV*AEVSLWVFCWS Trigger: GGACCAACAGAACACCCAGAGGCTGACTTCTGCTCAGACAAATGGTAGTGGGAATGCGGGCATGGAAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS TCA 72 bp | CATTGGGCGCAATGGCCTCGAAGCAGCCCCCACATTTaGCAGCAAACAGTTTCTCGTAGTGGTACTTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HWAQWPRSSPHI*QQTVSRSGTCS Trigger: ACTGCAAGTACCACTACGAGAAACTGTTTGCTGTCAAATGTGGGGGCTGCTTCGAGGCCATTGCGCCCAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS TCA 72 bp | TTCTGCAGGGCTTGGAGGATACTTCAAACGAGGCCTTaGATGCTCTCCTCTGCTGAGTGGTCAGGATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FCRAWRILQTRP*MLSSAEWSGWF Trigger: GAACCATCCTGACCACTCAGCAGAGGAGAGCATTCAAGGCCTCGTTTGAAGTATCCTCCAAGCCCTGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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| CDS TCA 72 bp | CTTCTGAGGTTGCCAGGAAGCAGTCTCCCAGGTTACTaGGAGATGTGTCATCACTATCCAAGTCATGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LLRLPGSSLPGY*EMCHHYPSHGK Trigger: TTTTCCATGACTTGGATAGTGATGACACATCTCTCAGTAACCTGGGAGACTGCTTCCTGGCAACCTCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028003.9 ENSMUST00000111377.8 |
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