RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LMTK2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038970

Ensembl transcript IDs: ENSMUST00000041804.8

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACGCCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTaGCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGAGGTCTC +
Preference number: 1 (lower is better)
Translates to: PRQQVQLPPSMASPR*HGHQYLLGVGKRGL
Trigger: GAGACCTCGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp CCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTGCCATaGCCACCAATACTTGCTTGGGGTAGGAAAGCGAGGTCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: PAGAAPAQHGFATLP*PPILAWGRKARSPS
Trigger: AGAGGGAGACCTCGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp CAGGATGTCCTGGCCAGGGCCTGGAGACTCAACCCATTGTCACACTaGAGCCTGGACAGCAGGGGCAGCACCGGGATATTTGGGGCGAGG +
Preference number: 1 (lower is better)
Translates to: QDVLARAWRLNPLSH*SLDSRGSTGIFGAR
Trigger: CCTCGCCCCAAATATCCCGGTGCTGCCCCTGCTGTCCAGGCTCCAGTGTGACAATGGGTTGAGTCTCCAGGCCCTGGCCAGGACATCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp GAGGGAGTTGCTTCCTGGCGTGGTGGCCCCGCTTTCCATCACTCCTaGGCCGCTCACTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCG +
Preference number: 1 (lower is better)
Translates to: EGVASWRGGPAFHHS*AAHCLVPVSMEWIA
Trigger: CGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGGCTCAGGAGTGATGGAAAGCGGGGCCACCACGCCAGGAAGCAACTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp CTCCTGAGCCGCTCACTGTCTGGTGCCAGTCAGCATGGAGTGGATTaGGTTGCTCAGGTGGACAAGCAGGAGCGCTGCTGGCTGGGAGAG +
Preference number: 1 (lower is better)
Translates to: LLSRSLSGASQHGVD*VAQVDKQERCWLGE
Trigger: CTCTCCCAGCCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGGCTCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp AAGAGGAGAGCTGGGTGCTTGGTACAGGAAAGGGGCCATGAGGGCTaGTGGAGGCCCTGCTGGGGTCTCTGCCCTGCTACTTGCAGCTAC +
Preference number: 1 (lower is better)
Translates to: KRRAGCLVQERGHEG*WRPCWGLCPATCSY
Trigger: GTAGCTGCAAGTAGCAGGGCAGAGACCCCAGCAGGGCCTCCAGCAGCCCTCATGGCCCCTTTCCTGTACCAAGCACCCAGCTCTCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp CCTGAGACGCAGAGCTCCCGCAAGCTGGCCTCTGTGCTGAGCAAGTaGTGCATGGCCTCATCTCGCCAGAAAAGGACCCTGGGCACTGAG +
Preference number: 1 (lower is better)
Translates to: PETQSSRKLASVLSK*CMASSRQKRTLGTE
Trigger: CTCAGTGCCCAGGGTCCTTTTCTGGCGAGATGAGGCCATGCACCACTTGCTCAGCACAGAGGCCAGCTTGCGGGAGCTCTGCGTCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp ATTGTCACACTGGAGCCTGGACAGCAGGGGCAGCACCGGGATATTTaGGGCGAGGAGCTCAGTGAGAAGAGCCACGCCAGCAGGTGCAGC +
Preference number: 1 (lower is better)
Translates to: IVTLEPGQQGQHRDI*GEELSEKSHASRCS
Trigger: GCTGCACCTGCTGGCGTGGCTCTTCTCACTGAGCTCCTCGCCCCAAATATCCCGGTGCTGCCCCTGCTGTCCAGGCTCCAGTGTGACAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp ACTTACAGCTCTGTGGGGACCAGTGTCTCAGAGGTCCCACCTGCCTaGGACGCAGAGCTCCCGCAAGCTGGCCTCTGTGCTGAGCAAGTG +
Preference number: 1 (lower is better)
Translates to: TYSSVGTSVSEVPPA*DAELPQAGLCAEQV
Trigger: CACTTGCTCAGCACAGAGGCCAGCTTGCGGGAGCTCTGCGTCTCAGGCAGGTGGGACCTCTGAGACACTGGTCCCCACAGAGCTGTAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp GAGCCGCTCACTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTaGTCAGGTGGACAAGCAGGAGCGCTGCTGGCTGGGAGAGTGTCT +
Preference number: 1 (lower is better)
Translates to: EPLTVWCQSAWSGLR*SGGQAGALLAGRVS
Trigger: AGACACTCTCCCAGCCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp GGCGTGGTGGCCCCGCTTTCCATCACTCCTGAGCCGCTCACTGTCTaGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAA +
Preference number: 1 (lower is better)
Translates to: GVVAPLSITPEPLTV*CQSAWSGLRCSGGQ
Trigger: TTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGGCTCAGGAGTGATGGAAAGCGGGGCCACCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp GTGGTGGCCCCGCTTTCCATCACTCCTGAGCCGCTCACTGTCTGGTaGCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCA +
Preference number: 1 (lower is better)
Translates to: VVAPLSITPEPLTVW*QSAWSGLRCSGGQA
Trigger: TGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGGCTCAGGAGTGATGGAAAGCGGGGCCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp CACTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTaGACAAGCAGGAGCGCTGCTGGCTGGGAGAGTGTCTACAGCCAA +
Preference number: 1 (lower is better)
Translates to: HCLVPVSMEWIALLR*TSRSAAGWESVYSQ
Trigger: TTGGCTGTAGACACTCTCCCAGCCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp GCAGCACCCAGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTaGGGACCAGTGTCTCAGAGGTCCCACCTGCCTGAGACGCAGAGC +
Preference number: 1 (lower is better)
Translates to: AAPRVDKLLFSLTAL*GPVSQRSHLPETQS
Trigger: GCTCTGCGTCTCAGGCAGGTGGGACCTCTGAGACACTGGTCCCCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp CACCGACACCCACACTTGCACTCTGCAGGAGAGTCCAAGTCCTTCTaGTTGATAGCAGGATGTCCTGGCCAGGGCCTGGAGACTCAACCC +
Preference number: 1 (lower is better)
Translates to: HRHPHLHSAGESKSF*LIAGCPGQGLETQP
Trigger: GGGTTGAGTCTCCAGGCCCTGGCCAGGACATCCTGCTATCAATCAGAAGGACTTGGACTCTCCTGCAGAGTGCAAGTGTGGGTGTCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp GGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTaGGCAGGCTTCAGTAACCAAACGCCACACGTTCAGCCCCCGGGA +
Preference number: 1 (lower is better)
Translates to: GQDETVGTCTRPSFA*AGFSNQTPHVQPPG
Trigger: TCCCGGGGGCTGAACGTGTGGCGTTTGGTTACTGAAGCCTGCTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp TCTGATTGCGTTAAGTACAACCTGGTGGGTAGCAGGCCGTGGGTGTaGCTGTCCCACCCAGATCCCTGGCGAGGACAGGATGAAACAGTG +
Preference number: 1 (lower is better)
Translates to: SDCVKYNLVGSRPWV*LSHPDPWRGQDETV
Trigger: CACTGTTTCATCCTGTCCTCGCCAGGGATCTGGGTGGGACAGTCACACCCACGGCCTGCTACCCACCAGGTTGTACTTAACGCAATCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp CTTCTTCCCAAACAGCTCCCTCAGCAGCACCCAGAGTGGACAAACTaGTCTTCTCACTTACAGCTCTGTGGGGACCAGTGTCTCAGAGGT +
Preference number: 1 (lower is better)
Translates to: LLPKQLPQQHPEWTN*SSHLQLCGDQCLRG
Trigger: ACCTCTGAGACACTGGTCCCCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGGAGCTGTTTGGGAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp TTATATTGCCATGAACCCCTTCTGATTGCGTTAAGTACAACCTGGTaGGTAGCAGGCCGTGGGTGTGACTGTCCCACCCAGATCCCTGGC +
Preference number: 1 (lower is better)
Translates to: LYCHEPLLIALSTTW*VAGRGCDCPTQIPG
Trigger: GCCAGGGATCTGGGTGGGACAGTCACACCCACGGCCTGCTACCCACCAGGTTGTACTTAACGCAATCAGAAGGGGTTCATGGCAATATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp GAGACCCATCTCTCTAAAAACAGGCCTGCATGGCTGGAGGCTGGTTaGCATCGCAACCTTTCAATGAATGGCTTCTGGCCCAGACAGAGT +
Preference number: 1 (lower is better)
Translates to: ETHLSKNRPAWLEAG*HRNLSMNGFWPRQS
Trigger: ACTCTGTCTGGGCCAGAAGCCATTCATTGAAAGGTTGCGATGGCAACCAGCCTCCAGCCATGCAGGCCTGTTTTTAGAGAGATGGGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp CTGTTATATTGCCATGAACCCCTTCTGATTGCGTTAAGTACAACCTaGTGGGTAGCAGGCCGTGGGTGTGACTGTCCCACCCAGATCCCT +
Preference number: 1 (lower is better)
Translates to: LLYCHEPLLIALSTT*WVAGRGCDCPTQIP
Trigger: AGGGATCTGGGTGGGACAGTCACACCCACGGCCTGCTACCCACCAGGTTGTACTTAACGCAATCAGAAGGGGTTCATGGCAATATAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp ACAGACCTCCTCAGAGAGACCCATCTCTCTAAAAACAGGCCTGCATaGCTGGAGGCTGGTTGCCATCGCAACCTTTCAATGAATGGCTTC +
Preference number: 1 (lower is better)
Translates to: TDLLRETHLSKNRPA*LEAGCHRNLSMNGF
Trigger: GAAGCCATTCATTGAAAGGTTGCGATGGCAACCAGCCTCCAGCCATGCAGGCCTGTTTTTAGAGAGATGGGTCTCTCTGAGGAGGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp CAAGTGGTGCATGGCCTCATCTCGCCAGAAAAGGACCCTGGGCACTaGGTGATGGGTGCACCTCTTCAGGGATTTCTACCAAAAGAATTT +
Preference number: 1 (lower is better)
Translates to: QVVHGLISPEKDPGH*VMGAPLQGFLPKEF
Trigger: AAATTCTTTTGGTAGAAATCCCTGAAGAGGTGCACCCATCACTCAGTGCCCAGGGTCCTTTTCTGGCGAGATGAGGCCATGCACCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp TGGCCTCATCTCGCCAGAAAAGGACCCTGGGCACTGAGTGATGGGTaGACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAG +
Preference number: 1 (lower is better)
Translates to: WPHLARKGPWALSDG*TSSGISTKRISKHE
Trigger: CTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTGCACCCATCACTCAGTGCCCAGGGTCCTTTTCTGGCGAGATGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp TGGTGCATGGCCTCATCTCGCCAGAAAAGGACCCTGGGCACTGAGTaGTGGGTGCACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAA +
Preference number: 1 (lower is better)
Translates to: WCMASSRQKRTLGTE*WVHLFRDFYQKNFK
Trigger: TTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTGCACCCATCACTCAGTGCCCAGGGTCCTTTTCTGGCGAGATGAGGCCATGCACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp GTGTTAGGGACAGCAGACTCCTCCGATGATGTACTGAAGCTACGCTaGAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCT +
Preference number: 1 (lower is better)
Translates to: VLGTADSSDDVLKLR*RCEIPFRTRGELGA
Trigger: AGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGCGTAGCTTCAGTACATCATCGGAGGAGTCTGCTGTCCCTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp AAGATGGCCAGCCCTCAAATGTCAGTAACTCTATCCCAGGCTGGCTaGGAAAGGAGGCTACACATATGGATCCACCTGACTGTAATCAGT +
Preference number: 1 (lower is better)
Translates to: KMASPQMSVTLSQAG*ERRLHIWIHLTVIS
Trigger: ACTGATTACAGTCAGGTGGATCCATATGTGTAGCCTCCTTTCGCAGCCAGCCTGGGATAGAGTTACTGACATTTGAGGGCTGGCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 90 bp AATCAAACCAGCGGTCAGCACCAGCTTGGCCTGCCATATCTTCCTTaGATAATTTACGATGCTGTACAATATTGGGAGCTCAGAACACTC +
Preference number: 1 (lower is better)
Translates to: NQTSGQHQLGLPYLP*IIYDAVQYWELRTL
Trigger: GAGTGTTCTGAGCTCCCAATATTGTACAGCATCGTAAATTATCCAAGGAAGATATGGCAGGCCAAGCTGGTGCTGACCGCTGGTTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp GGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGGCTaGTCAGAGTACCCACCTTATATAGAAACATGCTCGATGCAATCA +
Preference number: 1 (lower is better)
Translates to: GFLPKEFQSTRGRAG*SEYPPYIETCSMQS
Trigger: TGATTGCATCGAGCATGTTTCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 90 bp ATAAATATAAACGGGAATTGTATTGTTAAAATCCCCTCAGCATGGTaGAAGATGGCCAGCCCTCAAATGTCAGTAACTCTATCCCAGGCT +
Preference number: 1 (lower is better)
Translates to: ININGNCIVKIPSAW*KMASPQMSVTLSQA
Trigger: AGCCTGGGATAGAGTTACTGACATTTGAGGGCTGGCCATCTTTCACCATGCTGAGGGGATTTTAACAATACAATTCCCGTTTATATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 90 bp TTACGATGCTGTACAATATTGGGAGCTCAGAACACTCACCCACAGTaGAGTCAAAGAGCAATTAGTGATTTCCTAAAGACAATAAATATG +
Preference number: 1 (lower is better)
Translates to: LRCCTILGAQNTHPQ*SQRAISDFLKTINM
Trigger: CATATTTATTGTCTTTAGGAAATCACTAATTGCTCTTTGACTGCACTGTGGGTGAGTGTTCTGAGCTCCCAATATTGTACAGCATCGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 90 bp CAGGAGCAGCCCAGGCGAGCGGGCAGACGAGCGCTGCAGAGGGAGTaGCTTCCTGGCGTGGTGGCCCCGCTTTCCATCACTCCTGAGCCG +
Preference number: 2 (lower is better)
Translates to: QEQPRRAGRRALQRE*LPGVVAPLSITPEP
Trigger: CGGCTCAGGAGTGATGGAAAGCGGGGCCACCACGCCAGGAAGCAACTCCCTCTGCAGCGCTCGTCTGCCCGCTCGCCTGGGCTGCTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR TCA 90 bp GAGAAGAGCCACGCCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTACCCTGGGCACTGAGTaGTGGGTGCACCTCTTCAGG +
Preference number: 2 (lower is better)
Translates to: EKSHASRCSSRPAWLRHATLGTE*WVHLFR
Trigger: CCTGAAGAGGTGCACCCATCACTCAGTGCCCAGGGT...AGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR TCA 90 bp GAGAAGAGCCACGCCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTAGCTGGCCTCTGTGCTaGGCAAGTGGTGCATGGCCT +
Preference number: 2 (lower is better)
Translates to: EKSHASRCSSRPAWLRHASWPLC*ASGAWP
Trigger: AGGCCATGCACCACTTGCTCAGCACAGAGGCCAGCT...AGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACGGCCATGAGGGCTGCTaGAGGCCCTGCTGGGGTCTC +
Preference number: 2 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDGHEGC*RPCWGL
Trigger: GAGACCCCAGCAGGGCCTCCAGCAGCCCTCATGGCC...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTCGGGCAGACGAGCGCTaGAGAGGGAGTTGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASRADER*RGSCFL
Trigger: CAGGAAGCAACTCCCTCTGCAGCGCTCGTCTGCCCG...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 90 bp ACTCCTGAGCCGCTCACTGTCTGGTGCCAGTCAGCATGGAGTGGATaGCGTTGCTCAGGTGGACAAGCAGGAGCGCTGCTGGCTGGGAGA +
Preference number: 2 (lower is better)
Translates to: TPEPLTVWCQSAWSG*RCSGGQAGALLAGR
Trigger: TCTCCCAGCCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGGCTCAGGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR TCA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCAGCTTTCCATCACTCCTaGGCCGCTCACTGTCTGGTG +
Preference number: 2 (lower is better)
Translates to: ATGAGCILGAMARDGFFPAFHHS*AAHCLV
Trigger: CACCAGACAGTGAGCGGCTCAGGAGTGATGGAAAGC...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCACCGCTCACTGTCTGGTaGCAGTCAGCATGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: ATGAGCILGAMARDGFFPPLTVW*QSAWSG
Trigger: TCCACTCCATGCTGACTGGCACCAGACAGTGAGCGG...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp GAGAAGAGCCACGCCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTGCACTGAGTGATGGGTaGACCTCTTCAGGGATTTCT +
Preference number: 2 (lower is better)
Translates to: EKSHASRCSSRPAWLRHAALSDG*TSSGIS
Trigger: AGAAATCCCTGAAGAGGTGCACCCATCACTCAGTGC...AGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACGTATCCTGGGGGCTATaGCCAGGGATGGCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDVSWGL*PGMASS
Trigger: GGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATAC...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp TGGCCAGGGCCTGGAGACTCAACCCATTGTCACACTGGAGCCTGGACAGCAGGGGGAGAGCTGGGTGCTTaGTACAGGAAAGGGGCCATG +
Preference number: 2 (lower is better)
Translates to: WPGPGDSTHCHTGAWTAGGELGA*YRKGAM
Trigger: CATGGCCCCTTTCCTGTACCAAGCACCCAGCTCTCC...CCCTGCTGTCCAGGCTCCAGTGTGACAATGGGTTGAGTCTCCAGGCCCTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTAGCTCCCGCCCAGCATaGCTTCGCCACGCTGCCATG +
Preference number: 2 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFSSRPA*LRHAAM
Trigger: CATGGCAGCGTGGCGAAGCCATGCTGGGCGGGAGCT...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR TCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGCGGCGTTCTCAGGCTaGGGAGCTGCCTGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPAAFSG*GAACLF
Trigger: AAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCCGC...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTAGAGGCAGGGCAGGCTaGTCAGAGTACCCACCTTAT +
Preference number: 2 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASRGRAG*SEYPPY
Trigger: ATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCT...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCATCACTTACAGCTCTGTaGGGACCAGTGTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: ATGAGCILGAMARDGFFPSLTAL*GPVSQR
Trigger: CCTCTGAGACACTGGTCCCCACAGAGCTGTAAGTGA...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 90 bp GTATGGTGGCAGCATCAGGGGGCAGAGGCAGGTGGATCTCTGAGTTaGAGGCCAGCCTGGACTATACAGCAAGTTCCAGAACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: VWWQHQGAEAGGSLS*RPAWTIQQVPEQPG
Trigger: CCCTGGCTGTTCTGGAACTTGCTGTATAGTCCAGGCTGGCCTCAAACTCAGAGATCCACCTGCCTCTGCCCCCTGATGCTGCCACCATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR TCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTAAGGACCCTGGGCACTaGGTGATGGGTGCACCTCTT +
Preference number: 2 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTKDPGH*VMGAPL
Trigger: AAGAGGTGCACCCATCACTCAGTGCCCAGGGTCCTT...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTAGGAGCGCTGCTGGCTaGGAGAGTGTCTACAGCCAA +
Preference number: 2 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPRSAAG*ESVYSQ
Trigger: TTGGCTGTAGACACTCTCCCAGCCAGCAGCGCTCCT...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTCTCTTTTCCCGGCCTTaGGGACAGACATGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPLFSRP*GQTCSG
Trigger: CCCACTGCATGTCTGTCCCCAAGGCCGGGAAAAGAG...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 90 bp GGCGGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTaGGGGACAGACATGCAGTGGGTCACTAATTCTACAAATGCCCTA +
Preference number: 2 (lower is better)
Translates to: GGVLRLRSCLSLFPA*GTDMQWVTNSTNAL
Trigger: TAGGGCATTTGTAGAATTAGTGACCCACTGCATGTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp ATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACCCCCACCGATGCCCAGCACGAGTaGAGGAGCAGCCCAGGCGAG +
Preference number: 2 (lower is better)
Translates to: IQSLPFHATTQKIYPTPTDAQHE*RSSPGE
Trigger: CTCGCCTGGGCTGCTCCTGCACTCGTGCTGGGCATC...GGTGGGGGTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGACCGAAGCTTTACAGTaGCATGCAGAGCAGACACCC +
Preference number: 2 (lower is better)
Translates to: GEDRMKQWEHAQDPASPETEALQ*HAEQTP
Trigger: GGGTGTCTGCTCTGCATGGCACTGTAAAGCTTCGGT...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTACCGACACCCACACTTaGACTCTGCAGGAGAGTCCA +
Preference number: 2 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFTDTHT*TLQESP
Trigger: TGGACTCTCCTGCAGAGTGCAAGTGTGGGTGTCGGT...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp GTCCTTCTGATTGATAGCAGGATGTCCTGGCCAGGGCCTGGAGACTCAACCCATATTGCGTTGCTCAGGTaGACAAGCAGGAGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: VLLIDSRMSWPGPGDSTHIALLR*TSRSAA
Trigger: AGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAAT...ATGGGTTGAGTCTCCAGGCCCTGGCCAGGACATCCTGCTATCAATCAGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp CTCCCGCAAGCTGGCCTCTGTGCTGAGCAAGTGGTGCATGGCCTCATCTCGCCAGATGCTGTACAATATTaGGAGCTCAGAACACTCACC +
Preference number: 2 (lower is better)
Translates to: LPQAGLCAEQVVHGLISPDAVQY*ELRTLT
Trigger: GGTGAGTGTTCTGAGCTCCCAATATTGTACAGCATC...TGGCGAGATGAGGCCATGCACCACTTGCTCAGCACAGAGGCCAGCTTGCGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTAGCTTTACAGTGCCATaGAGAGCAGACACCCAAGGA +
Preference number: 2 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPSFTVP*RADTQG
Trigger: TCCTTGGGTGTCTGCTCTGCATGGCACTGTAAAGCT...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp CACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGGAGGGAGTTGCTTCCTaGCGTGGTGGCCCCGCTTTC +
Preference number: 2 (lower is better)
Translates to: HLFRDFYQKNFKAREAGQEGVAS*RGGPAF
Trigger: GAAAGCGGGGCCACCACGCCAGGAAGCAACTCCCTC...CTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAACAAGAGGAGAGCTaGGTGCTTGGTACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPEQEES*VLGTGK
Trigger: CTTTCCTGTACCAAGCACCCAGCTCTCCTCTTGTTC...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp CCTAAAGACAATAAATATGGCTCACTTGTGAGCACTCCCTCCCCTGGTGCGCCTCCAGTCAGCATGGAGTaGATTGCGTTGCTCAGGTGG +
Preference number: 2 (lower is better)
Translates to: PKDNKYGSLVSTPSPGAPPVSME*IALLRW
Trigger: CCACCTGAGCAACGCAATCCACTCCATGCTGACTGG...AGGCGCACCAGGGGAGGGAGTGCTCACAAGTGAGCCATATTTATTGTCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACAGTGCTGAGCAAGTGGTaGATGGCCTCATCTCGCCAG +
Preference number: 2 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTVLSKW*MASSRQ
Trigger: CTGGCGAGATGAGGCCATGCACCACTTGCTCAGCAC...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGCTATTGCTTGAGATTTaGGGAGGATGTGTTGATGCG +
Preference number: 2 (lower is better)
Translates to: GEDRMKQWEHAQDPASPELLLEI*GGCVDA
Trigger: CGCATCAACACATCCTCCCCAAATCTCAAGCAATAG...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTAAAGATAAAACCAGCTaGGTATGGTGGCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTKDKTS*VWWQHQ
Trigger: CTGATGCTGCCACCATACCCAGCTGGTTTTATCTTT...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp GAAGCTATCAAGAGGGACTTGGAGGGCTCATTATTTTTATTAGAGGACTTAAAGCACTCCCTCCCCTGGTaGGCCTGCCCCTCTGTGGCA +
Preference number: 2 (lower is better)
Translates to: EAIKRDLEGSLFLLEDLKHSLPW*ACPSVA
Trigger: TGCCACAGAGGGGCAGGCGCACCAGGGGAGGGAGTG...CTTTAAGTCCTCTAATAAAAATAATGAGCCCTCCAAGTCCCTCTTGATAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTACTGGTGCCCCCGTTTaGTTCTTAAGAAATATTGAG +
Preference number: 2 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPTGAPV*FLRNIE
Trigger: CTCAATATTTCTTAAGAAGCAAACGGGGGCACCAGT...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGGGGACAGACATGCAGTaGGTCACTAATTCTACAAAT +
Preference number: 2 (lower is better)
Translates to: GEDRMKQWEHAQDPASPEGTDMQ*VTNSTN
Trigger: ATTTGTAGAATTAGTGACCCACTGCATGTCTGTCCC...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR TCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTTGGAGTTTAGTCTACTaGGATTTCTGTCTATTGCTT +
Preference number: 2 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPWSLVY*DFCLLL
Trigger: AAGCAATAGACAGAAATCTCAGTAGACTAAACTCCA...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp GAAGCTATCAAGAGGGACTTGGAGGGCTCATTATTTTTATTAGAGGACTTAAAGAGCAGTGTGGCAGTGTaGCCACTTCGGCAGGATGCC +
Preference number: 2 (lower is better)
Translates to: EAIKRDLEGSLFLLEDLKSSVAV*PLRQDA
Trigger: GGCATCCTGCCGAAGTGGCCACACTGCCACACTGCT...CTTTAAGTCCTCTAATAAAAATAATGAGCCCTCCAAGTCCCTCTTGATAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 90 bp AAATCAAACCAGCGGTCAGCACCAGCTTGGCCTGCCATATCTTCCTaGGATAATTTACGATGCTGTACAATATTGGGAGCTCAGAACACT +
Preference number: 2 (lower is better)
Translates to: KSNQRSAPAWPAISS*DNLRCCTILGAQNT
Trigger: AGTGTTCTGAGCTCCCAATATTGTACAGCATCGTAAATTATCCAAGGAAGATATGGCAGGCCAAGCTGGTGCTGACCGCTGGTTTGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR GCA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACAAACACTCACCCACAGTaGAGTCAAAGAGCAATTAGT +
Preference number: 2 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTNTHPQ*SQRAIS
Trigger: ACTAATTGCTCTTTGACTGCACTGTGGGTGAGTGTT...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CCA 90 bp ATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACCCCCACCACAGAACAGCAGTTTTaGCCTCATCAAAAATATGTC +
Preference number: 2 (lower is better)
Translates to: IQSLPFHATTQKIYPTPTTEQQF*PHQKYV
Trigger: GACATATTTTTGATGAGGCCAAAACTGCTGTTCTGT...GGTGGGGGTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 90 bp TCTACTGAGATTTCTGTCTATTGCTTGAGATTTGGGGAGGATGTGTaGATGCGTGTTATACAAAGTCTTCCCTTCCATGCAACGACACAG +
Preference number: 2 (lower is better)
Translates to: STEISVYCLRFGEDV*MRVIQSLPFHATTQ
Trigger: CTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGCATCAACACATCCTCCCCAAATCTCAAGCAATAGACAGAAATCTCAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp GCAGTGTGGCCACTTCGGCAGGATGCCCAGCACGAGTaGAGGAGCAGCCCAGGCGAGCGGGCAGACGAGCGC +
Preference number: 3 (lower is better)
Translates to: AVWPLRQDAQHE*RSSPGERADER
Trigger: GCGCTCGTCTGCCCGCTCGCCTGGGCTGCTCCTGCACTCGTGCTGGGCATCCTGCCGAAGTGGCCACACTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp GGCGAGGAGCTCAGTGAGAAGAGCCACGCCAGCAGGTaGAGCTCCCGCCCAGCATGGCTTCGCCACGCTGCC +
Preference number: 3 (lower is better)
Translates to: GEELSEKSHASR*SSRPAWLRHAA
Trigger: GGCAGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTCACTGAGCTCCTCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp GGGGCAGCACCGGGATATTTGGGGCGAGGAGCTCAGTaGGAAGAGCCACGCCAGCAGGTGCAGCTCCCGCCC +
Preference number: 3 (lower is better)
Translates to: GAAPGYLGRGAQ*EEPRQQVQLPP
Trigger: GGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTCACTGAGCTCCTCGCCCCAAATATCCCGGTGCTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp CCAGGCGAGCGGGCAGACGAGCGCTGCAGAGGGAGTTaGTTCCTGGCGTGGTGGCCCCGCTTTCCATCACTC +
Preference number: 3 (lower is better)
Translates to: PGERADERCRGS*FLAWWPRFPSL
Trigger: GAGTGATGGAAAGCGGGGCCACCACGCCAGGAAGCAACTCCCTCTGCAGCGCTCGTCTGCCCGCTCGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GTGAGCACTCCCTCCCCTGGTGCGCCTGCCCCTCTGTaGCACCTGTGGCGAGGCAGACATCCACACCCACAC +
Preference number: 3 (lower is better)
Translates to: VSTPSPGAPAPL*HLWRGRHPHPH
Trigger: GTGTGGGTGTGGATGTCTGCCTCGCCACAGGTGCCACAGAGGGGCAGGCGCACCAGGGGAGGGAGTGCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp CAGCTCTGTGGGGACCAGTGTCTCAGAGGTCCCACCTaGCTGAGACGCAGAGCTCCCGCAAGCTGGCCTCTG +
Preference number: 3 (lower is better)
Translates to: QLCGDQCLRGPT*LRRRAPASWPL
Trigger: CAGAGGCCAGCTTGCGGGAGCTCTGCGTCTCAGGCAGGTGGGACCTCTGAGACACTGGTCCCCACAGAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp GGCCATGAGGGCTGCTGGAGGCCCTGCTGGGGTCTCTaGCCTGCTACTTGCAGCTACAGGGGCTGGCTGTAT +
Preference number: 3 (lower is better)
Translates to: GHEGCWRPCWGL*PATCSYRGWLY
Trigger: ATACAGCCAGCCCCTGTAGCTGCAAGTAGCAGGGCAGAGACCCCAGCAGGGCCTCCAGCAGCCCTCATGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GGGTGCTTGGTACAGGAAAGGGGCCATGAGGGCTGCTaGAGGCCCTGCTGGGGTCTCTGCCCTGCTACTTGC +
Preference number: 3 (lower is better)
Translates to: GCLVQERGHEGC*RPCWGLCPATC
Trigger: GCAAGTAGCAGGGCAGAGACCCCAGCAGGGCCTCCAGCAGCCCTCATGGCCCCTTTCCTGTACCAAGCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp AAGAGCCACGCCAGCAGGTGCAGCTCCCGCCCAGCATaGCTTCGCCACGCTGCCATGGCCACCAATACTTGC +
Preference number: 3 (lower is better)
Translates to: KSHASRCSSRPA*LRHAAMATNTC
Trigger: GCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CAA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTGCGCTGCAGAGGGAGTaGCTTCCTGGCGTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASALQRE*LPGVVA
Trigger: GGCCACCACGCCAGGAAGCAACTCCCTCTGCAGCGC...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp GCTTCCTGGCGTGGTGGCCCCGCTTTCCATCACTCCTaGGCCGCTCACTGTCTGGTGCCAGTCAGCATGGAG +
Preference number: 3 (lower is better)
Translates to: ASWRGGPAFHHS*AAHCLVPVSME
Trigger: CTCCATGCTGACTGGCACCAGACAGTGAGCGGCTCAGGAGTGATGGAAAGCGGGGCCACCACGCCAGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GCAGCTCCCGCCCAGCATGGCTTCGCCACGCTGCCATaGCCACCAATACTTGCTTGGGGTAGGAAAGCGAGG +
Preference number: 3 (lower is better)
Translates to: AAPAQHGFATLP*PPILAWGRKAR
Trigger: CCTCGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATGCTGGGCGGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp AGCTCCCGCAAGCTGGCCTCTGTGCTGAGCAAGTGGTaGATGGCCTCATCTCGCCAGAAAAGGACCCTGGGC +
Preference number: 3 (lower is better)
Translates to: SSRKLASVLSKW*MASSRQKRTLG
Trigger: GCCCAGGGTCCTTTTCTGGCGAGATGAGGCCATGCACCACTTGCTCAGCACAGAGGCCAGCTTGCGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp CAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTaGCATGGCCACCAATACTTGCTTGGGGTAGGAAAG +
Preference number: 3 (lower is better)
Translates to: QVQLPPSMASPR*HGHQYLLGVGK
Trigger: CTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp CCTCCAATACTCGTGAGCCAGAGCAGTGTGGCAGTGTaGCCACTTCGGCAGGATGCCCAGCACGAGTGCAGG +
Preference number: 3 (lower is better)
Translates to: PPILVSQSSVAV*PLRQDAQHECR
Trigger: CCTGCACTCGTGCTGGGCATCCTGCCGAAGTGGCCACACTGCCACACTGCTCTGGCTCACGAGTATTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp AGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATaGCTTCTTCCCAAACAGCTCCCTCAGCAGCACCCA +
Preference number: 3 (lower is better)
Translates to: RGWLYPGGYGQG*LLPKQLPQQHP
Trigger: TGGGTGCTGCTGAGGGAGCTGTTTGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp ACTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTaGTCAGGTGGACAAGCAGGAGCGCTGCTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: TVWCQSAWSGLR*SGGQAGALLAG
Trigger: CCCAGCCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp CGCTCACTGTCTGGTGCCAGTCAGCATGGAGTGGATTaGGTTGCTCAGGTGGACAAGCAGGAGCGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: RSLSGASQHGVD*VAQVDKQERCW
Trigger: CCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTaGACAAGCAGGAGCGCTGCTGGCTGGGAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: VPVSMEWIALLR*TSRSAAGWESV
Trigger: GACACTCTCCCAGCCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp CAGAGCTCCCGCAAGCTGGCCTCTGTGCTGAGCAAGTaGTGCATGGCCTCATCTCGCCAGAAAAGGACCCTG +
Preference number: 3 (lower is better)
Translates to: QSSRKLASVLSK*CMASSRQKRTL
Trigger: CAGGGTCCTTTTCTGGCGAGATGAGGCCATGCACCACTTGCTCAGCACAGAGGCCAGCTTGCGGGAGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp GTTAAGTACAACCTGGTGGGTAGCAGGCCGTGGGTGTaGCTGTCCCACCCAGATCCCTGGCGAGGACAGGAT +
Preference number: 3 (lower is better)
Translates to: VKYNLVGSRPWV*LSHPDPWRGQD
Trigger: ATCCTGTCCTCGCCAGGGATCTGGGTGGGACAGTCACACCCACGGCCTGCTACCCACCAGGTTGTACTTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GCCCCGCTTTCCATCACTCCTGAGCCGCTCACTGTCTaGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCA +
Preference number: 3 (lower is better)
Translates to: APLSITPEPLTV*CQSAWSGLRCS
Trigger: TGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGGCTCAGGAGTGATGGAAAGCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATaGCCAGGGATGGCTTCTTCCCAAACAGCTCCCTCA +
Preference number: 3 (lower is better)
Translates to: LQLQGLAVSWGL*PGMASSQTAPS
Trigger: TGAGGGAGCTGTTTGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp CCCTGCTACTTGCAGCTACAGGGGCTGGCTGTATCCTaGGGGCTATGGCCAGGGATGGCTTCTTCCCAAACA +
Preference number: 3 (lower is better)
Translates to: PCYLQLQGLAVS*GLWPGMASSQT
Trigger: TGTTTGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAAGTAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp CCCACCCAGATCCCTGGCGAGGACAGGATGAAACAGTaGGAACATGCACAAGACCCAGCTTCGCCTGAGCAG +
Preference number: 3 (lower is better)
Translates to: PTQIPGEDRMKQ*EHAQDPASPEQ
Trigger: CTGCTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGGGATCTGGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp GTGACTGTCCCACCCAGATCCCTGGCGAGGACAGGATaGAACAGTGGGAACATGCACAAGACCCAGCTTCGC +
Preference number: 3 (lower is better)
Translates to: VTVPPRSLARTG*NSGNMHKTQLR
Trigger: GCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGGGATCTGGGTGGGACAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CAA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCACGATGCTGTACAATATaGGGAGCTCAGAACACTCAC +
Preference number: 3 (lower is better)
Translates to: ATGAGCILGAMARDGFFPRCCTI*GAQNTH
Trigger: GTGAGTGTTCTGAGCTCCCAATATTGTACAGCATCG...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp CCACACTTGCACTCTGCAGGAGAGTCCAAGTCCTTCTaGTTGATAGCAGGATGTCCTGGCCAGGGCCTGGAG +
Preference number: 3 (lower is better)
Translates to: PHLHSAGESKSF*LIAGCPGQGLE
Trigger: CTCCAGGCCCTGGCCAGGACATCCTGCTATCAATCAGAAGGACTTGGACTCTCCTGCAGAGTGCAAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTaGTACAGGAAAGGGGCCATGAGGGCTGCTGGAGGC +
Preference number: 3 (lower is better)
Translates to: EIPFRTRGELGA*YRKGAMRAAGG
Trigger: GCCTCCAGCAGCCCTCATGGCCCCTTTCCTGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp AACCAAACGCCACACGTTCAGCCCCCGGGACGGCCGTaGGTGACGCAATACTGCCAACACATCTTAAGAACT +
Preference number: 3 (lower is better)
Translates to: NQTPHVQPPGRP*VTQYCQHILRT
Trigger: AGTTCTTAAGATGTGTTGGCAGTATTGCGTCACCCACGGCCGTCCCGGGGGCTGAACGTGTGGCGTTTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp CATGGCCTCATCTCGCCAGAAAAGGACCCTGGGCACTaGGTGATGGGTGCACCTCTTCAGGGATTTCTACCA +
Preference number: 3 (lower is better)
Translates to: HGLISPEKDPGH*VMGAPLQGFLP
Trigger: TGGTAGAAATCCCTGAAGAGGTGCACCCATCACTCAGTGCCCAGGGTCCTTTTCTGGCGAGATGAGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp AGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTaGGGACCAGTGTCTCAGAGGTCCCACCTGCCTGAG +
Preference number: 3 (lower is better)
Translates to: RVDKLLFSLTAL*GPVSQRSHLPE
Trigger: CTCAGGCAGGTGGGACCTCTGAGACACTGGTCCCCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp AAACAGCTCCCTCAGCAGCACCCAGAGTGGACAAACTaGTCTTCTCACTTACAGCTCTGTGGGGACCAGTGT +
Preference number: 3 (lower is better)
Translates to: KQLPQQHPEWTN*SSHLQLCGDQC
Trigger: ACACTGGTCCCCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGGAGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp CTCTCTAAAAACAGGCCTGCATGGCTGGAGGCTGGTTaGCATCGCAACCTTTCAATGAATGGCTTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: LSKNRPAWLEAG*HRNLSMNGFWP
Trigger: GGGCCAGAAGCCATTCATTGAAAGGTTGCGATGGCAACCAGCCTCCAGCCATGCAGGCCTGTTTTTAGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp GCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACATaGAGTGGGTCACTAATTCTACAAATGCCCTATGGG +
Preference number: 3 (lower is better)
Translates to: AACLFSRPWGQT*SGSLILQMPYG
Trigger: CCCATAGGGCATTTGTAGAATTAGTGACCCACTGCATGTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GGCCAGCCCTCAAATGTCAGTAACTCTATCCCAGGCTaGCTGCGAAAGGAGGCTACACATATGGATCCACCT +
Preference number: 3 (lower is better)
Translates to: GQPSNVSNSIPG*LRKEATHMDPP
Trigger: AGGTGGATCCATATGTGTAGCCTCCTTTCGCAGCCAGCCTGGGATAGAGTTACTGACATTTGAGGGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp GCTGGTTGCCATCGCAACCTTTCAATGAATGGCTTCTaGCCCAGACAGAGTCTCTCAGGAAGGGGGAACTAC +
Preference number: 3 (lower is better)
Translates to: AGCHRNLSMNGF*PRQSLSGRGNY
Trigger: GTAGTTCCCCCTTCCTGAGAGACTCTGTCTGGGCCAGAAGCCATTCATTGAAAGGTTGCGATGGCAACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp CTCAGAGAGACCCATCTCTCTAAAAACAGGCCTGCATaGCTGGAGGCTGGTTGCCATCGCAACCTTTCAATG +
Preference number: 3 (lower is better)
Translates to: LRETHLSKNRPA*LEAGCHRNLSM
Trigger: CATTGAAAGGTTGCGATGGCAACCAGCCTCCAGCCATGCAGGCCTGTTTTTAGAGAGATGGGTCTCTCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CAA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCAAACAGAACAGCAGTTTaGGCCTCATCAAAAATATGT +
Preference number: 3 (lower is better)
Translates to: ATGAGCILGAMARDGFFPNRTAV*ASSKIC
Trigger: ACATATTTTTGATGAGGCCAAAACTGCTGTTCTGTT...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp GACTTAAAGTCAGCTTCCAGTCTGGTAGGTGGAGGGTaGGCACTCAAGGGAGGGCAGAAAGAAAAGTCACCA +
Preference number: 3 (lower is better)
Translates to: DLKSASSLVGGG*ALKGGQKEKSP
Trigger: TGGTGACTTTTCTTTCTGCCCTCCCTTGAGTGCTCACCCTCCACCTACCAGACTGGAAGCTGACTTTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp TTAGGTGAACTCACACCGACACCCACACTTGCACTCTaGAGGAGAGTCCAAGTCCTTCTGATTGATAGCAGG +
Preference number: 3 (lower is better)
Translates to: LGELTPTPTLAL*RRVQVLLIDSR
Trigger: CCTGCTATCAATCAGAAGGACTTGGACTCTCCTGCAGAGTGCAAGTGTGGGTGTCGGTGTGAGTTCACCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp CTCGCCAGAAAAGGACCCTGGGCACTGAGTGATGGGTaGACCTCTTCAGGGATTTCTACCAAAAGAATTTCA +
Preference number: 3 (lower is better)
Translates to: LARKGPWALSDG*TSSGISTKRIS
Trigger: TGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTGCACCCATCACTCAGTGCCCAGGGTCCTTTTCTGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp TGTGTTGATGCGTGTTATACAAAGTCTTCCCTTCCATaGAACGACACAGAAGATCTATCCCACCCCCACCCC +
Preference number: 3 (lower is better)
Translates to: CVDACYTKSSLP*NDTEDLSHPHP
Trigger: GGGGTGGGGGTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGCATCAACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp CCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGGCTaGTCAGAGTACCCACCTTATATAGAAACATGCTCG +
Preference number: 3 (lower is better)
Translates to: PKEFQSTRGRAG*SEYPPYIETCS
Trigger: CGAGCATGTTTCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CCA 72 bp CTATCCCAGGCTGGCTGCGAAAGGAGGCTACACATATaGATCCACCTGACTGTAATCAGTGAATCTCAACTT +
Preference number: 3 (lower is better)
Translates to: LSQAGCERRLHI*IHLTVISESQL
Trigger: AAGTTGAGATTCACTGATTACAGTCAGGTGGATCCATATGTGTAGCCTCCTTTCGCAGCCAGCCTGGGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR-3UTR CAA 90 bp GAAGCTATCAAGAGGGACTTGGAGGGCTCATTATTTTTATTAGAGGACTTAAAGCACCGACACCCACACTaGCACTCTGCAGGAGAGTCC +
Preference number: 3 (lower is better)
Translates to: EAIKRDLEGSLFLLEDLKHRHPH*HSAGES
Trigger: GGACTCTCCTGCAGAGTGCAAGTGTGGGTGTCGGTG...CTTTAAGTCCTCTAATAAAAATAATGAGCCCTCCAAGTCCCTCTTGATAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp ACAGCAGACTCCTCCGATGATGTACTGAAGCTACGCTaGAGATGTGAAATCCCTTTCAGAACAAGAGGAGAG +
Preference number: 3 (lower is better)
Translates to: TADSSDDVLKLR*RCEIPFRTRGE
Trigger: CTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGCGTAGCTTCAGTACATCATCGGAGGAGTCTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp GAAGAACACTCAAAATACCGAAGCTTTACAGTGCCATaGAGAGCAGACACCCAAGGAGACAGAGACAAAAAC +
Preference number: 3 (lower is better)
Translates to: EEHSKYRSFTVP*RADTQGDRDKN
Trigger: GTTTTTGTCTCTGTCTCCTTGGGTGTCTGCTCTGCATGGCACTGTAAAGCTTCGGTATTTTGAGTGTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR TCA 72 bp AACGGGAATTGTATTGTTAAAATCCCCTCAGCATGGTaGAAGATGGCCAGCCCTCAAATGTCAGTAACTCTA +
Preference number: 3 (lower is better)
Translates to: NGNCIVKIPSAW*KMASPQMSVTL
Trigger: TAGAGTTACTGACATTTGAGGGCTGGCCATCTTTCACCATGCTGAGGGGATTTTAACAATACAATTCCCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR GCA 72 bp TGTACAATATTGGGAGCTCAGAACACTCACCCACAGTaGAGTCAAAGAGCAATTAGTGATTTCCTAAAGACA +
Preference number: 3 (lower is better)
Translates to: CTILGAQNTHPQ*SQRAISDFLKT
Trigger: TGTCTTTAGGAAATCACTAATTGCTCTTTGACTGCACTGTGGGTGAGTGTTCTGAGCTCCCAATATTGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 72 bp CCCAGGCGAGCGGGCAGACGAGCGCTGCAGAGGGAGTaGCTTCCTGGCGTGGTGGCCCCGCTTTCCATCACT +
Preference number: 4 (lower is better)
Translates to: PRRAGRRALQRE*LPGVVAPLSIT
Trigger: AGTGATGGAAAGCGGGGCCACCACGCCAGGAAGCAACTCCCTCTGCAGCGCTCGTCTGCCCGCTCGCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GTGGCCACTTCGGCAGGATGCCCAGCACGAGTGCAGGAGCAGCCCAGGCGAGCGACGGTGCACGTCTTCTaGGGCTGGCCTCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VATSAGCPARVQEQPRRATVHVF*GWPLVR
Trigger: CCTGACAAGAGGCCAGCCGCAGAAGACGTGCACCGT...CGCTCGCCTGGGCTGCTCCTGCACTCGTGCTGGGCATCCTGCCGAAGTGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GAGAAGAGCCACGCCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTAGCAGTGCCTTCGGGTaGAGGGTGCAGGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: EKSHASRCSSRPAWLRHASSAFG*RVQGPL
Trigger: GAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCT...AGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACTCCCCTGCACCTGTTTaGGGAAGTGGCGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDSPAPV*GSGAAR
Trigger: CCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGA...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCAGAGCAGGGGGACACGTaGGGCCAGCTCTGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: ATGAGCILGAMARDGFFPEQGDT*GQLCSA
Trigger: CGCAGAGCAGAGCTGGCCGCACGTGTCCCCCTGCTC...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp TGGCCAGGGCCTGGAGACTCAACCCATTGTCACACTGGAGCCTGGACAGCAGGGGCTTCTCCCCCGCAGTaGCCCAGCTCTTTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: WPGPGDSTHCHTGAWTAGASPPQ*PSSLVG
Trigger: CCCCACCAAAGAGCTGGGGCACTGCGGGGGAGAAGC...CCCTGCTGTCCAGGCTCCAGTGTGACAATGGGTTGAGTCTCCAGGCCCTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGACGTGCGGCCAGCTCTaGTCTGCGCTCCTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQTCGQL*SALLAG
Trigger: ACCGGCCAGGAGCGCAGAGCAGAGCTGGCCGCACGT...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTACCTGTTTGCGGAAGTaGCGCGGCCCGGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTTCLRK*RGPGTA
Trigger: GGCTGTGCCCGGGCCGCGCCACTTCCGCAAACAGGT...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GAGAAGAGCCACGCCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTCAGACTGCTCTGAGGTaGGGATGGGTGTTGACAAAC +
Preference number: 4 (lower is better)
Translates to: EKSHASRCSSRPAWLRHAQTALR*GWVLTN
Trigger: GTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTG...AGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GTGGCCACTTCGGCAGGATGCCCAGCACGAGTGCAGGAGCAGCCCAGGCGAGCGCCTTGGGGCTTGCACTaGCTTTTAACTCCTTCACTA +
Preference number: 4 (lower is better)
Translates to: VATSAGCPARVQEQPRRAPWGLH*LLTPSL
Trigger: TAGTGAAGGAGTTAAAAGTCAGTGCAAGCCCCAAGG...CGCTCGCCTGGGCTGCTCCTGCACTCGTGCTGGGCATCCTGCCGAAGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTCAGCTTGTGCATGGCTaGCAGCCCTGCGGCAATCTC +
Preference number: 4 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASQLVHG*QPCGNL
Trigger: GAGATTGCCGCAGGGCTGGCAGCCATGCACAAGCTG...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGGCAGACGCCAAGGCTaGATCCTCCGGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPGRRQG*ILRGSL
Trigger: AAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCC...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACCTCCAGCTGCGGCTTTaGGAGCTTCATGTCCCTCTC +
Preference number: 4 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDLQLRL*ELHVPL
Trigger: GAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAG...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GTGGCCACTTCGGCAGGATGCCCAGCACGAGTGCAGGAGCAGCCCAGGCGAGCGTTTTCTTTGTCAGACTaGCAGGTGTCCTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VATSAGCPARVQEQPRRAFSLSD*QVSLGS
Trigger: TGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAA...CGCTCGCCTGGGCTGCTCCTGCACTCGTGCTGGGCATCCTGCCGAAGTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTTCTGCTCTGCGCTCCTaGCCGGTGGGGGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPSALRS*PVGEER
Trigger: TCTCTCCTCCCCCACCGGCCAGGAGCGCAGAGCAGA...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 72 bp CACTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTaGCTCAGGTGGACAAGCAGGAGCGCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HCLVPVSMEWIA*LRWTSRSAAGW
Trigger: CCAGCCAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 72 bp CCGCTCACTGTCTGGTGCCAGTCAGCATGGAGTGGATaGCGTTGCTCAGGTGGACAAGCAGGAGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PLTVWCQSAWSG*RCSGGQAGALL
Trigger: CAGCAGCGCTCCTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAGTGAGCGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GTGGCCACTTCGGCAGGATGCCCAGCACGAGTGCAGGAGCAGCCCAGGCGAGCGGCTGAGCAGCATTGTTaGAGAGTTCCCAAAGTGTTA +
Preference number: 4 (lower is better)
Translates to: VATSAGCPARVQEQPRRAAEQHC*RVPKVL
Trigger: TAACACTTTGGGAACTCTTCAACAATGCTGCTCAGC...CGCTCGCCTGGGCTGCTCCTGCACTCGTGCTGGGCATCCTGCCGAAGTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACGGGGTCATCCAGGCTTaGACTCAAGATGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDGVIQA*TQDGWL
Trigger: AAGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCC...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GAGAAGAGCCACGCCAGCAGGTGCAGCTCCCGCCCAGCATGGCTTCGCCACGCTCTCTCCACGCTACCCTaGGCAGTAATATCATTCACA +
Preference number: 4 (lower is better)
Translates to: EKSHASRCSSRPAWLRHALSTLP*AVISFT
Trigger: TGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAG...AGCGTGGCGAAGCCATGCTGGGCGGGAGCTGCACCTGCTGGCGTGGCTCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp TGGCCAGGGCCTGGAGACTCAACCCATTGTCACACTGGAGCCTGGACAGCAGGGCGGGGTGTCTTCTGCTaGTGGGGTGAAGTCTATCTC +
Preference number: 4 (lower is better)
Translates to: WPGPGDSTHCHTGAWTAGRGVFC*WGEVYL
Trigger: GAGATAGACTTCACCCCACCAGCAGAAGACACCCCG...CCCTGCTGTCCAGGCTCCAGTGTGACAATGGGTTGAGTCTCCAGGCCCTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTAATCCTCTTCTGTCCTaGGTTCCTCAGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASNPLLS*VPQPQP
Trigger: GGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATT...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTAGTTTCCGAGGGGTGTaGGAGCCTAGGGACTCTAGC +
Preference number: 4 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASSFRGV*EPRDSS
Trigger: GCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACT...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACCCAACACCAGGGCATTaGCAGATGTTCCTGGGACCT +
Preference number: 4 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDPTPGH*QMFLGP
Trigger: AGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGG...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGCCGGCAGCTGCTCAATaGCCTCGGCAGCTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: GEDRMKQWEHAQDPASPEPAAAQ*PRQLRV
Trigger: AACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGG...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTGCGCTCCTGGCCGGTaGGGGAGGAGAGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASCAPGR*GRREVF
Trigger: AAATACTTCTCTCCTCCCCCACCGGCCAGGAGCGCA...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACCTGGCTTCTTTGGGGTaGGCACTGCTCTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDLASLG*ALLWKK
Trigger: TTTCTTCCAGAGCAGTGCTCACCCCAAAGAAGCCAG...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CCCTCAGCAGCACCCAGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTGGTGCTGCAGCTGCGTCTaGGTCAGCAGTGCCTTCGGG +
Preference number: 4 (lower is better)
Translates to: PSAAPRVDKLLFSLTALWCCSCV*VSSAFG
Trigger: CCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCA...CCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CATGGCTTCGCCACGCTGCCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGAGAAAGTGCAGCTTGTaGATGGCTGCCAGCCCTGCG +
Preference number: 4 (lower is better)
Translates to: HGFATLPWPPILAWGRKARKCSL*MAASPA
Trigger: CGCAGGGCTGGCAGCCATGCACAAGCTGCACTTTCT...CGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTGGCGTCTCCACAGACTaGTCTGAGGTGGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTGVSTD*SEVGMG
Trigger: ACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCC...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTCGTCTGAGTCAGCAGTaGCTTCGGGTGCAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTRLSQQ*LRVQGA
Trigger: TGCACCCTGCACCCGAAGGCACTGCTGACTCAGACG...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CATGGCTTCGCCACGCTGCCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGACCTCTGCTGGGGACTaGATGGACGGGGTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: HGFATLPWPPILAWGRKATSAGD*MDGVSS
Trigger: AGAAGACACCCCGTCCATCCAGTCCCCAGCAGAGGT...CGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTTTCTTCTGGGACAACTaGCTCAGGTGGGGACTGGCC +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTFFWDN*LRWGLA
Trigger: GGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAA...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTTACGGCTGCTCCAGCTaGGGCTTTGGGAGCTTCATG +
Preference number: 4 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPYGCSS*GFGSFM
Trigger: CATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTA...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GTCCTTCTGATTGATAGCAGGATGTCCTGGCCAGGGCCTGGAGACTCAACCCATCGTGAAGACCTCTGCTaGGGACTGGATGGACGGGGT +
Preference number: 4 (lower is better)
Translates to: VLLIDSRMSWPGPGDSTHREDLC*GLDGRG
Trigger: ACCCCGTCCATCCAGTCCCCAGCAGAGGTCTTCACG...ATGGGTTGAGTCTCCAGGCCCTGGCCAGGACATCCTGCTATCAATCAGAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTAAGCACAGAGGGCCCTaGTCCAAGAGCTTATGGGGC +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTKHRGP*SKSLWG
Trigger: GCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTT...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTGGAGGCAAACTGCTGTaGCCACTGTCACCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTGGKLL*PLSPAA
Trigger: TGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCC...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTATCTGGCTTGTCCTGTaGGGCTTCCAGGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTIWLVL*GFQAAF
Trigger: GAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGAT...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp TGGCCAGGGCCTGGAGACTCAACCCATTGTCACACTGGAGCCTGGACAGCAGGGCATTTAAGTCGGAGGTaGGATAACAATTCCGCAGGG +
Preference number: 4 (lower is better)
Translates to: WPGPGDSTHCHTGAWTAGHLSRR*DNNSAG
Trigger: CCCTGCGGAATTGTTATCTCACCTCCGACTTAAATG...CCCTGCTGTCCAGGCTCCAGTGTGACAATGGGTTGAGTCTCCAGGCCCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTCTCTCCCGAATGACTTaGTTGAGGACATCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASLSRMT*LRTSRS
Trigger: TGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAG...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGGGACGGGGTGTCTTCTaGTGGTGGGGTGAAGTCTAT +
Preference number: 4 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQGRGVF*WWGEVY
Trigger: ATAGACTTCACCCCACCAGCAGAAGACACCCCGTCC...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGCACCCGACTTTGATCTaGCTTGTCCTGTGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQHPTLI*LVLWGF
Trigger: GAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTG...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGTGGTATTTGTACCTGTaGAGGCCAGGGTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: GEDRMKQWEHAQDPASPEWYLYL*RPGCMG
Trigger: GCCCATGCACCCTGGCCTCCACAGGTACAAATACCA...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp TGGCCAGGGCCTGGAGACTCAACCCATTGTCACACTGGAGCCTGGACAGCAGGGTTTCCCTTCAATGTCTaGCTCCTTCAGCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: WPGPGDSTHCHTGAWTAGFPFNV*LLQLGA
Trigger: AGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAA...CCCTGCTGTCCAGGCTCCAGTGTGACAATGGGTTGAGTCTCCAGGCCCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTTGTTGGTGTCGGGCTTaGGAGCAGTCCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFCWCRA*EQSTAV
Trigger: AACAGCAGTGGACTGCTCTCAAGCCCGACACCAACA...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTTGCAGAGTCTCGATATaGACTCTGGGGGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTCRVSI*TLGAKC
Trigger: ACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCA...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTAGGGCCAGATCACTGTaGAGAAAGTGCAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPRARSL*RKCSLC
Trigger: GCACAAGCTGCACTTTCTGCACAGTGATCTGGCCCT...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTTGGCCACTGTCATCTTaGTTGCCAGGGCCAGGATCT +
Preference number: 4 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFWPLSS*LPGPGS
Trigger: AGATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCA...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGGTCCCAGATTGCTGCTaGTTTTCTCCTCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GEDRMKQWEHAQDPASPEVPDCC*FSPPAG
Trigger: TCCAGCTGGAGGAGAAAAGCAGCAGCAATCTGGGAC...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GTCCTTCTGATTGATAGCAGGATGTCCTGGCCAGGGCCTGGAGACTCAACCCATGTGACGCCTGACACCTaGACCTTCATTCTGTCCACG +
Preference number: 4 (lower is better)
Translates to: VLLIDSRMSWPGPGDSTHVTPDT*TFILST
Trigger: CGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCAC...ATGGGTTGAGTCTCCAGGCCCTGGCCAGGACATCCTGCTATCAATCAGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTTCTGTGGCCATCGCCTaGATCCGAGATGACAATGAC +
Preference number: 4 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPSVAIA*IRDDND
Trigger: GTCATTGTCATCTCGGATGCAGGCGATGGCCACAGA...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGTCCTCTGTAGCAGCATaGTCTGTGAATCACCCCGCA +
Preference number: 4 (lower is better)
Translates to: GEDRMKQWEHAQDPASPESSVAA*SVNHPA
Trigger: TGCGGGGTGATTCACAGACCATGCTGCTACAGAGGA...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CCCTCAGCAGCACCCAGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTGGCAGGACAGGACTCTCTaGAAGCATCAGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PSAAPRVDKLLFSLTALWQDRTL*KHQLVW
Trigger: CCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTG...CCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CATGGCTTCGCCACGCTGCCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGAGAAGCTGGCAATGTTaGCAGGAGAGATGGAGAACC +
Preference number: 4 (lower is better)
Translates to: HGFATLPWPPILAWGRKARSWQC*QERWRT
Trigger: GGTTCTCCATCTCTCCTGCCAACATTGCCAGCTTCT...CGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CATGGCTTCGCCACGCTGCCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGCTTCTGCTGGTGGGGTaGAGTCTATCTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: HGFATLPWPPILAWGRKALLLVG*SLSHHQ
Trigger: TTGATGATGAGATAGACTTCACCCCACCAGCAGAAG...CGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTTCTCCTGTATGTAGTTaGGACTGTGGCGGGCGACTT +
Preference number: 4 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFSPVCS*DCGGRL
Trigger: AAGTCGCCCGCCACAGTCTCAACTACATACAGGAGA...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CCCTCAGCAGCACCCAGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTGGTTAACTCCTTCACTATaGCTCTCGCGACGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSAAPRVDKLLFSLTALWLTPSL*LSRRWC
Trigger: GCACCAGCGTCGCGAGAGTCATAGTGAAGGAGTTAA...CCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGAAGGCTTGTTGTCTTTaGCATGAAAGGGTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: GEDRMKQWEHAQDPASPEKACCL*HERVRG
Trigger: TCCCCGGACCCTTTCATGTCAAAGACAACAAGCCTT...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCCTCAGCAGCACCCAGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTGGGGCAGCCAGCAGAACTaGAGCACTTCGTACCATCTA +
Preference number: 4 (lower is better)
Translates to: PSAAPRVDKLLFSLTALWGSQQN*STSYHL
Trigger: TAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCC...CCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTGAGTTGAGAGCAGTCCACTaGTGTTCAAAGTCGACCTCC +
Preference number: 4 (lower is better)
Translates to: GEDRMKQWEHAQDPASPELRAVH*CSKSTS
Trigger: GGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAA...CTCAGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCTGGCGAGGACAGGATGAAACAGTGGGAACATGCACAAGACCCAGCTTCGCCTCCACTGGGAAGAACATaGTGGAGTAAGACAGGGCTT +
Preference number: 4 (lower is better)
Translates to: PGEDRMKQWEHAQDPASPPLGRT*WSKTGL
Trigger: AAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGG...AGGCGAAGCTGGGTCTTGTGCATGTTCCCACTGTTTCATCCTGTCCTCGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCCTCAGCAGCACCCAGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTGGCCAGTCCCAGATTGCTaGTGCTTTTCTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSAAPRVDKLLFSLTALWPVPDC*CFSPPA
Trigger: AGCTGGAGGAGAAAAGCAGCAGCAATCTGGGACTGG...CCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACGAGGAGAGAAGTATTTaGAGGTTTGAAGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDEERSI*RFEEKA
Trigger: AGCCTTCTCTTCAAACCTCCAAATACTTCTCTCCTC...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACATGGGCACTGAGAGCGTaGAGACCTCTGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTWALRA*RPLLGT
Trigger: AGTCCCCAGCAGAGGTCTTCACGCTCTCAGTGCCCA...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTCTCCGTCTTCACTGCTaGCTCCTTGTTCAATGTCTG +
Preference number: 4 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFLRLHC*LLVQCL
Trigger: CAGACATTGAACAAGGAGGCAGCAGTGAAGACGGAG...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp TGGCCAGGGCCTGGAGACTCAACCCATTGTCACACTGGAGCCTGGACAGCAGGGCTTAAAGTCTATTTCTaGGTCCTTACAGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: WPGPGDSTHCHTGAWTAGLKVYF*VLTAGN
Trigger: GTTTCCTGCTGTAAGGACCCAGAAATAGACTTTAAG...CCCTGCTGTCCAGGCTCCAGTGTGACAATGGGTTGAGTCTCCAGGCCCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp TTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTTCAAAGCTCAGGCCCTaGCTGGTCTCCGTCACCGTG +
Preference number: 4 (lower is better)
Translates to: FRDFYQKNFKAREAGQAASKLRP*LVSVTV
Trigger: CACGGTGACGGAGACCAGCCAGGGCCTGAGCTTTGA...AGCAGCCTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGCTGGGAAGAACATGCTaGAGTAAGACAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQLGRTC*SKTGLH
Trigger: ATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAG...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CATGGCTTCGCCACGCTGCCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGGCCTTAGAGTTAAGCTaGTTTAAAGTCTCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: HGFATLPWPPILAWGRKAALELS*FKVSAA
Trigger: AGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGC...CGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTGGCTTAAAGTCAGCTTaGACTCCATTTAGTTCCATT +
Preference number: 4 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASGLKSA*TPFSSI
Trigger: AATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCC...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CTCCCGCAAGCTGGCCTCTGTGCTGAGCAAGTGGTGCATGGCCTCATCTCGCCATCTTGTAGTTCTGAGTaGCAAGAATTCTGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LPQAGLCAEQVVHGLISPSCSSE*QEFCKV
Trigger: TACTTTGCAGAATTCTTGTCACTCAGAACTACAAGA...TGGCGAGATGAGGCCATGCACCACTTGCTCAGCACAGAGGCCAGCTTGCGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GCGTGTTATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACCTGCTGGGGACTGGATaGACGGGGTGTCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ACYTKSSLPCNDTEDLSHLLGTG*TGCLLL
Trigger: CAGCAGAAGACACCCCGTCCATCCAGTCCCCAGCAG...GTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GTCCTTCTGATTGATAGCAGGATGTCCTGGCCAGGGCCTGGAGACTCAACCCATCTCAAACACCTCCACTaGGAAGAACATGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: VLLIDSRMSWPGPGDSTHLKHLH*EEHAGV
Trigger: TACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAG...ATGGGTTGAGTCTCCAGGCCCTGGCCAGGACATCCTGCTATCAATCAGAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp ATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACCCCCACCAAGGCCTCCTTGCTTTaGCAAGTGACGTCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: IQSLPFHATTQKIYPTPTKASLL*QVTSGG
Trigger: ACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTT...GGTGGGGGTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp TTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCTGTGGCGGGCGACTTaGGACTTCAAACCTTCCACA +
Preference number: 4 (lower is better)
Translates to: FRDFYQKNFKAREAGQAALWRAT*DFKPST
Trigger: TGTGGAAGGTTTGAAGTCTCAAGTCGCCCGCCACAG...AGCAGCCTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GCGTGTTATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACGAGATCCTTCTTCTGTaGGCAAGGCTGGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ACYTKSSLPCNDTEDLSHEILLL*ARLGRP
Trigger: AGGCCTCCCCAGCCTTGCTCACAGAAGAAGGATCTC...GTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGCCAAGTGTGAAGCTCTaGGGAGGACCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: HLFRDFYQKNFKAREAGQPSVKL*GGPSAP
Trigger: AGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGG...CTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GCGTGTTATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACTCTGGGGGCCAAGTGTaGAGCTCTGAGGAGGACCTT +
Preference number: 4 (lower is better)
Translates to: ACYTKSSLPCNDTEDLSHSGGQV*SSEEDL
Trigger: AAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGA...GTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp ATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCAGAGTACCCACCTTATATAGAGGTCCAGTCCCAGATTaGTGCTGCTTTTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ISKHERQGRLLRVPTLYRGPVPD*CCFSPP
Trigger: TGGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACC...TCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CCCTCAGCAGCACCCAGAGTGGACAAACTGCTCTTCTCACTTACAGCTCTGTGGACACTGGAGGACATTTaGATGCTGGAGGATGTAGTA +
Preference number: 4 (lower is better)
Translates to: PSAAPRVDKLLFSLTALWTLEDI*MLEDVV
Trigger: TACTACATCCTCCAGCATCCAAATGTCCTCCAGTGT...CCACAGAGCTGTAAGTGAGAAGAGCAGTTTGTCCACTCTGGGTGCTGCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GCGTGTTATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACCTCACGGGCACCTCCTaGCCACTGTCATCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ACYTKSSLPCNDTEDLSHLTGTS*PLSSCL
Trigger: CAAGCAAGATGACAGTGGCCAGGAGGTGCCCGTGAG...GTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GTCCTTCTGATTGATAGCAGGATGTCCTGGCCAGGGCCTGGAGACTCAACCCATAAGCATCAGCTGGTGTaGGCTGCAATGTTTCTTGTA +
Preference number: 4 (lower is better)
Translates to: VLLIDSRMSWPGPGDSTHKHQLV*AAMFLV
Trigger: TACAAGAAACATTGCAGCCCACACCAGCTGATGCTT...ATGGGTTGAGTCTCCAGGCCCTGGCCAGGACATCCTGCTATCAATCAGAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CCTAAAGACAATAAATATGGCTCACTTGTGAGCACTCCCTCCCCTGGTGCGCCTCCTCCTTGTATCTGCTaGAGCCTATTCCATAGTCAC +
Preference number: 4 (lower is better)
Translates to: PKDNKYGSLVSTPSPGAPPPCIC*SLFHSH
Trigger: GTGACTATGGAATAGGCTTCAGCAGATACAAGGAGG...AGGCGCACCAGGGGAGGGAGTGCTCACAAGTGAGCCATATTTATTGTCTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCTAAAGACAATAAATATGGCTCACTTGTGAGCACTCCCTCCCCTGGTGCGCCTCTTTGGGGTGAGCACTaGTCTGGAAGAAATCCTCTT +
Preference number: 4 (lower is better)
Translates to: PKDNKYGSLVSTPSPGAPLWGEH*SGRNPL
Trigger: AAGAGGATTTCTTCCAGAGCAGTGCTCACCCCAAAG...AGGCGCACCAGGGGAGGGAGTGCTCACAAGTGAGCCATATTTATTGTCTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp ATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCAGAGTACCCACCTTATATAGAGGTGTCTTCTGCTGGTaGGGTGAAGTCTATCTCATC +
Preference number: 4 (lower is better)
Translates to: ISKHERQGRLLRVPTLYRGVFCW*GEVYLI
Trigger: GATGAGATAGACTTCACCCCACCAGCAGAAGACACC...TCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp ATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCAGAGTACCCACCTTATATAGACAAAATGGTCGTGCTTaGCAGCCTCCCACACATACT +
Preference number: 4 (lower is better)
Translates to: ISKHERQGRLLRVPTLYRQNGRA*QPPTHT
Trigger: AGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTG...TCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTTATCATTCACAAGGATaGGGTGTCTGTTGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFYHSQG*GVCWLD
Trigger: GTCTAACCAACAGACACCCCATCCTTGTGAATGATA...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp CACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGCTCCGAGTCATTGTCTaGGAAGTATGCAGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: HLFRDFYQKNFKAREAGQLRVIV*EVCRVS
Trigger: CGAGACTCTGCATACTTCTCAGACAATGACTCGGAG...CTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGGCTCTGAGGTGGGGATaGGTGTTGACAAACTGTCTT +
Preference number: 4 (lower is better)
Translates to: HLFRDFYQKNFKAREAGQALRWG*VLTNCL
Trigger: AAGACAGTTTGTCAACACCCATCCCCACCTCAGAGC...CTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 72 bp CAGCGGTCAGCACCAGCTTGGCCTGCCATATCTTCCTaGGATAATTTACGATGCTGTACAATATTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QRSAPAWPAISS*DNLRCCTILGA
Trigger: AGCTCCCAATATTGTACAGCATCGTAAATTATCCAAGGAAGATATGGCAGGCCAAGCTGGTGCTGACCGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACATTGTTGTCTTTGACATaGAAGGGTCCGGGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTLLSLT*KGPGRS
Trigger: ACTTCTCCCCGGACCCTTTCATGTCAAAGACAACAA...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp GAAGCTATCAAGAGGGACTTGGAGGGCTCATTATTTTTATTAGAGGACTTAAAGCCTTCAGCACCTCTGTaGCCATCGCCTGCATCCGAG +
Preference number: 4 (lower is better)
Translates to: EAIKRDLEGSLFLLEDLKPSAPL*PSPASE
Trigger: CTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGG...CTTTAAGTCCTCTAATAAAAATAATGAGCCCTCCAAGTCCCTCTTGATAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTAAGATTTATCCAGTGTaGAACTCATGTATGCAAGGA +
Preference number: 4 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFKIYPV*NSCMQG
Trigger: TCCTTGCATACATGAGTTCCACACTGGATAAATCTT...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp CACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGAGCTCTCCAAGTGGCTaGGCAAAGATTTATCCAGTG +
Preference number: 4 (lower is better)
Translates to: HLFRDFYQKNFKAREAGQSSPSG*AKIYPV
Trigger: CACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCT...CTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CCTAAAGACAATAAATATGGCTCACTTGTGAGCACTCCCTCCCCTGGTGCGCCTGTATTTAGTCTGATCTaGAGTCAAGAGTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: PKDNKYGSLVSTPSPGAPVFSLI*SQESVL
Trigger: CAAGACAGACTCTTGACTGCAGATCAGACTAAATAC...AGGCGCACCAGGGGAGGGAGTGCTCACAAGTGAGCCATATTTATTGTCTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp ATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCAGAGTACCCACCTTATATAGATTCTTGGACACTCAGTaGATCAAAGTGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ISKHERQGRLLRVPTLYRFLDTQ*IKVILV
Trigger: CACCAAGATCACTTTGATCCACTGAGTGTCCAAGAA...TCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CCA 90 bp ATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACCCCCACCGGATTTGGTTTCTTCTaGCTTCAGAATTGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: IQSLPFHATTQKIYPTPTGFGFF*LQNWVC
Trigger: ACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCC...GGTGGGGGTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACAGTCAAGAGTCTGTCTTaGAAGCTGGTCACTAATTCT +
Preference number: 4 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTVKSLS*KLVTNS
Trigger: AGAATTAGTGACCAGCTTTCAAGACAGACTCTTGAC...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp CACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGCAGACACACAAAGTTTaGCAAGGTATTTCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: HLFRDFYQKNFKAREAGQQTHKV*QGISLQ
Trigger: TTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTG...CTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR GCA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACATGTGGAACTCATGTATaGAAGGAGTTCATTGGTATT +
Preference number: 4 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTCGTHV*KEFIGI
Trigger: AATACCAATGAACTCCTTGCATACATGAGTTCCACA...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
3UTR CAA 72 bp ATTTCTGTCTATTGCTTGAGATTTGGGGAGGATGTGTaGATGCGTGTTATACAAAGTCTTCCCTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: ISVYCLRFGEDV*MRVIQSLPFHA
Trigger: TGCATGGAAGGGAAGACTTTGTATAACACGCATCAACACATCCTCCCCAAATCTCAAGCAATAGACAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR TCA 90 bp GAAGCTATCAAGAGGGACTTGGAGGGCTCATTATTTTTATTAGAGGACTTAAAGCAAACAGATAAACGGTaGCATCATCGAAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: EAIKRDLEGSLFLLEDLKQTDKR*HHRKMS
Trigger: TGACATTTTTCGATGATGTCACCGTTTATCTGTTTG...CTTTAAGTCCTCTAATAAAAATAATGAGCCCTCCAAGTCCCTCTTGATAGCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CCTCCATCTCCCGACCCAGCCGGTCCCGGGCGAAGTGGTCAAGGATaGGGAAGGCAGCGCTGCTGGATGCGTCCCTGCTGTTGGTGTCGG +
Preference number: 5 (lower is better)
Translates to: PPSPDPAGPGRSGQG*GRQRCWMRPCCWCR
Trigger: CCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCCCCATCCTTGACCACTTCGCCCGGGACCGGCTGGGTCGGGAGATGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp GGAGAGATGGAGAACCGGGAGCAGGGGGACACGTGCGGCCAGCTCTaGTCTGCGCTCCTGGCCGGTGGGGGAGGAGAGAAGTATTTGGAG +
Preference number: 5 (lower is better)
Translates to: GEMENREQGDTCGQL*SALLAGGGGEKYLE
Trigger: CTCCAAATACTTCTCTCCTCCCCCACCGGCCAGGAGCGCAGAGCAGAGCTGGCCGCACGTGTCCCCCTGCTCCCGGTTCTCCATCTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp GGGAGGCAAACTGCTGTGGCCACTGTCACCTGCTGCAGCTGCGTCTaGGTCAGCAGTGCCTTCGGGTGCAGGGTGCAGGGTCCACTCAGG +
Preference number: 5 (lower is better)
Translates to: GRQTAVATVTCCSCV*VSSAFGCRVQGPLR
Trigger: CCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GGGAACTTCTACAACAGGTACTTCCCCTGCACCTGTTTGCGGAAGTaGCGCGGCCCGGGCACAGCCGACCGTCAGGAGCAGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GNFYNRYFPCTCLRK*RGPGTADRQEQEQQ
Trigger: CTGCTGCTCCTGCTCCTGACGGTCGGCTGTGCCCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAAGTACCTGTTGTAGAAGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTTCCCCTGCACCTGTTaGCGGAAGTGGCGCGGCCCG +
Preference number: 5 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASFPCTC*RKWRGP
Trigger: CGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAA...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp ACCGGGAGCAGGGGGACACGTGCGGCCAGCTCTGCTCTGCGCTCCTaGCCGGTGGGGGAGGAGAGAAGTATTTGGAGGTTTGAAGAGAAG +
Preference number: 5 (lower is better)
Translates to: TGSRGTRAASSALRS*PVGEERSIWRFEEK
Trigger: CTTCTCTTCAAACCTCCAAATACTTCTCTCCTCCCCCACCGGCCAGGAGCGCAGAGCAGAGCTGGCCGCACGTGTCCCCCTGCTCCCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp GGAAGGCAGCGCTGCTGGATGCGTCCCTGCTGTTGGTGTCGGGCTTaGGAGCAGTCCACTGCTGTTCAAAGTCGACCTCCGAGTCCCGCT +
Preference number: 5 (lower is better)
Translates to: GRQRCWMRPCCWCRA*EQSTAVQSRPPSPA
Trigger: AGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp AACAAGGAGGGAACTTCTACAACAGGTACTTCCCCTGCACCTGTTTaGGGAAGTGGCGCGGCCCGGGCACAGCCGACCGTCAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NKEGTSTTGTSPAPV*GSGAARAQPTVRSR
Trigger: CCTGCTCCTGACGGTCGGCTGTGCCCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAAGTACCTGTTGTAGAAGTTCCCTCCTTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp TGCTGTGGCCACTGTCACCTGCTGCAGCTGCGTCTGAGTCAGCAGTaGCTTCGGGTGCAGGGTGCAGGGTCCACTCAGGAGATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: CCGHCHLLQLRLSQQ*LRVQGAGSTQEIPG
Trigger: ACCTGGAATCTCCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCACAGTGCCCCAGCTCTTaGGTGGGGGTTTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: ATGAGCILGAMARDGFFPQCPSS*VGVSWS
Trigger: TGACCAGGAAACCCCCACCAAAGAGCTGGGGCACTG...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp CTGGATGCGTCCCTGCTGTTGGTGTCGGGCTTGAGAGCAGTCCACTaGTGTTCAAAGTCGACCTCCGAGTCCCGCTGGCTCTGCATCCTC +
Preference number: 5 (lower is better)
Translates to: LDASLLLVSGLRAVH*CSKSTSESRWLCIL
Trigger: GAGGATGCAGAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp TCTTCTGTGAGCAAGGCTGGGGAGGCCTGTGGTGAGGTACCACTGTaGCGCCTGACACCTGCACCTTCATTCTGTCCACGCGTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: SSVSKAGEACGEVPL*RLTPAPSFCPRVSP
Trigger: GGGAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAGCCTTGCTCACAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CTTCATCTGGGTGGCCCCGGCCCTGCTCATCAAAATGGTCGTGCTTaGCAGCCTCCCACACATACTCAAAGCTCAGGCCCTGGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: LHLGGPGPAHQNGRA*QPPTHTQSSGPGWS
Trigger: AGACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTTCCCAACTGTGGCGGGCGACTaGAGACTTCAAACCTTCCAC +
Preference number: 5 (lower is better)
Translates to: ATGAGCILGAMARDGFFPTVAGD*RLQTFH
Trigger: GTGGAAGGTTTGAAGTCTCAAGTCGCCCGCCACAGT...TGGGAAGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CATGGCTTCGCCACGCTGCCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGCAAGGCCTCCTTGCTTaGGCAAGTGACGTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: HGFATLPWPPILAWGRKAQGLLA*ASDVWG
Trigger: CCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTG...CGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp AAAGTCACCAAGCCCACCACATTCCAGCCACAGTCACCACCGGCTCGCTTCACTCTAGGTAGGGGGAACTaGAGGACGCTGCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: KVTKPTTFQPQSPPARFTLGRGN*RTLLGC
Trigger: GCAGCCCAGCAGCGTCCTCAAGTTCCCCCTACCTAG...AGTGAAGCGAGCCGGTGGTGACTGTGGCTGGAATGTGGTGGGCTTGGTGACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp GGCACAGGGTGCTCCGTGTCGTCTTCAGACTCAGAGCTTAGGCTGTaGAAGTTGAAGGCTCGAAGGTCCTCGTCCGAGTCGTCGCTGTTC +
Preference number: 5 (lower is better)
Translates to: GTGCSVSSSDSELRL*KLKARRSSSESSLF
Trigger: GAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CACCTCCACTGGGAAGAACATGCTGGAGTAAGACAGGGCTTCATCTaGGTGGCCCCGGCCCTGCTCATCAAAATGGTCGTGCTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: HLHWEEHAGVRQGFI*VAPALLIKMVVLGS
Trigger: GCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CCGCTGTCGGCAGGCTTATCGGGAGGCAAGAGTTTCCGAGGGGTGTaGGAGCCTAGGGACTCTAGCAATGCTTCACGGACATCCACTGAA +
Preference number: 5 (lower is better)
Translates to: PLSAGLSGGKSFRGV*EPRDSSNASRTSTE
Trigger: TTCAGTGGATGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGCCGACAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp AGCCAGCAGAACTGCAGCACTTCGTACCATCTATCCGAGTACGGCTaGTCCAGCTGCGGCTTTGGGAGCTTCATGTCCCTCTCCCGAATG +
Preference number: 5 (lower is better)
Translates to: SQQNCSTSYHLSEYG*SSCGFGSFMSLSRM
Trigger: CATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp CTCCTCCAGCTGGATGTAGTAGTCACTTCCAACAGAGAGGTTGTGTaGATCAAACACAGGAACCACCCCAGGGGCCCTCACGGGCACCTC +
Preference number: 5 (lower is better)
Translates to: LLQLDVVVTSNREVV*IKHRNHPRGPHGHL
Trigger: GAGGTGCCCGTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAGCTGGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp TGTGAAGCTCTGAGGAGGACCTTCAGCACCTCTGTGGCCATCGCCTaGATCCGAGATGACAATGACCGGGTTGGGAGGCAAACTGCTGTG +
Preference number: 5 (lower is better)
Translates to: CEALRRTFSTSVAIA*IRDDNDRVGRQTAV
Trigger: CACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CTGCCAGCCCTGCGGCAATCTCACACGCCATCCTCTGTAGCAGCATaGTCTGTGAATCACCCCGCACGTGTTCTTGCTCATTGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: LPALRQSHTPSSVAA*SVNHPARVLAHCAG
Trigger: ACCTGCACAATGAGCAAGAACACGTGCGGGGTGATTCACAGACCATGCTGCTACAGAGGATGGCGTGTGAGATTGCCGCAGGGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp AATTCCGCAGGGCCAGATCACTGTGCAGAAAGTGCAGCTTGTGCATaGCTGCCAGCCCTGCGGCAATCTCACACGCCATCCTCTGTAGCA +
Preference number: 5 (lower is better)
Translates to: NSAGPDHCAESAACA*LPALRQSHTPSSVA
Trigger: TGCTACAGAGGATGGCGTGTGAGATTGCCGCAGGGCTGGCAGCCATGCACAAGCTGCACTTTCTGCACAGTGATCTGGCCCTGCGGAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CAACTGACTCAGGTGGGGACTGGCCCTTTACCAACACCAGGGCATTaGCAGATGTTCCTGGGACCTCCTCGGGCTTTTTATCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: QLTQVGTGPLPTPGH*QMFLGPPRAFYLAP
Trigger: CGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CGGAGTCCAGGCAGGCACAGTCTGCACCAAGGATGGGAAAAGGAGACTCTGTTTCTGGCCACTGTCATCTaGCTTGCCAGGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RSPGRHSLHQGWEKETLFLATVI*LARARI
Trigger: GATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCAG...AAACAGAGTCTCCTTTTCCCATCCTTGGTGCAGACTGTGCCTGCCTGGACTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp GGTGCTCCGTGTCGTCTTCAGACTCAGAGCTTAGGCTGTGCAAGTTaGAGGCTCGAAGGTCCTCGTCCGAGTCGTCGCTGTTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: GAPCRLQTQSLGCAS*RLEGPRPSRRCSHP
Trigger: AGGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp TGCTCAATGGCCTCGGCAGCTGAGGGTTTCAGCAAACTCCGCAGGTaGCTACCATCATCGTTACTGACAATGATGGGCACAGGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: CSMASAAEGFSKLRR*LPSSLLTMMGTGCS
Trigger: GGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GCAGACGCCAAGGCTGCATCCTCCGGGGCAGCCTTAGAGTTAAGCTaGTTTAAAGTCTCCGCAGCTTCCGAGTGTTTCTCCAGTGAGCTG +
Preference number: 5 (lower is better)
Translates to: ADAKAASSGAALELS*FKVSAASECFSSEL
Trigger: CAGCTCACTGGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp TTGCAGCTACAGGGGCTGGCTGTATCCTGGGGGCTATGGCCAGGGATGGCTTCTCACACTGGAGGACATTaGGATGCTGGAGGATGTAGT +
Preference number: 5 (lower is better)
Translates to: LQLQGLAVSWGLWPGMASHTGGH*DAGGCS
Trigger: ACTACATCCTCCAGCATCCAAATGTCCTCCAGTGTG...AGAAGCCATCCCTGGCCATAGCCCCCAGGATACAGCCAGCCCCTGTAGCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGACCCCGCACGTGTTCTaGCTCATTGTGCAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQTPHVF*LIVQVS
Trigger: GCTTACCTGCACAATGAGCAAGAACACGTGCGGGGT...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CATGGCTTCGCCACGCTGCCATGGCCACCAATACTTGCTTGGGGTAGGAAAGCGCCTCTCCCGAATGACTaGATTGAGGACATCCAGGTC +
Preference number: 5 (lower is better)
Translates to: HGFATLPWPPILAWGRKAPLPND*IEDIQV
Trigger: GACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGG...CGCTTTCCTACCCCAAGCAAGTATTGGTGGCCATGGCAGCGTGGCGAAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp CTGAGAAGTATGCAGAGTCTCGATATGAACTCTGGGGGCCAAGTGTaGAGCTCTGAGGAGGACCTTCAGCACCTCTGTGGCCATCGCCTG +
Preference number: 5 (lower is better)
Translates to: LRSMQSLDMNSGGQV*SSEEDLQHLCGHRL
Trigger: CAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCATACTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp TGGGCGATCTTCCTGTGTGTCCAGGTCATCGCAGCTGCTAGGTTCTaGATTCAACAAACTCAAGGGGCTGCTGGCCTCGTCGTTCACAGG +
Preference number: 5 (lower is better)
Translates to: WAIFLCVQVIAAARF*IQQTQGAAGLVVHR
Trigger: CCTGTGAACGACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp CAGGATCTGAAAGCGAATTCTCAAACACCTCCACTGGGAAGAACATaGTGGAGTAAGACAGGGCTTCATCTGGGTGGCCCCGGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: QDLKANSQTPPLGRT*WSKTGLHLGGPGPA
Trigger: AGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GAGGTGGGGATGGGTGTTGACAAACTGTCTTCTAAGAGGCTATCTTaGCTGGTAGAATCCGAGGAGAGGGCAGACGCCAAGGCTGCATCC +
Preference number: 5 (lower is better)
Translates to: EVGMGVDKLSSKRLS*LVESEERADAKAAS
Trigger: GGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CTGACATCAGAGCTTTCTTCTGGGACAACTGACTCAGGTGGGGACTaGCCCTTTACCAACACCAGGGCATTGGCAGATGTTCCTGGGACC +
Preference number: 5 (lower is better)
Translates to: LTSELSSGTTDSGGD*PFTNTRALADVPGT
Trigger: GGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp AGCTCTGCTCTGCGCTCCTGGCCGGTGGGGGAGGAGAGAAGTATTTaGAGGTTTGAAGAGAAGGCTTGGAACCCAGAAGGCTTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: SSALRSWPVGEERSI*RFEEKAWNPEGLLS
Trigger: AGACAACAAGCCTTCTGGGTTCCAAGCCTTCTCTTCAAACCTCCAAATACTTCTCTCCTCCCCCACCGGCCAGGAGCGCAGAGCAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGTCAAAATGGTCGTGCTaGGCAGCCTCCCACACATAC +
Preference number: 5 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQSKWSC*AASHTY
Trigger: GTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGA...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp GACTTTGATCTGGCTTGTCCTGTGGGGCTTCCAGGCAGCCTTCTCTaGCATCAGAGCTTTCTTCTGGGACAACTGACTCAGGTGGGGACT +
Preference number: 5 (lower is better)
Translates to: DFDLACPVGLPGSLL*HQSFLLGQLTQVGT
Trigger: AGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp TCACGGACATCCACTGAATCCAGGGAGTCTGGCGTCTCCACAGACTaGTCTGAGGTGGGGATGGGTGTTGACAAACTGTCTTCTAAGAGG +
Preference number: 5 (lower is better)
Translates to: SRTSTESRESGVSTD*SEVGMGVDKLSSKR
Trigger: CCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGGATGTCCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp CGCAGGTGCCTACCATCATCGTTACTGACAATGATGGGCACAGGGTaGTCCGTGTCGTCTTCAGACTCAGAGCTTAGGCTGTGCAAGTTG +
Preference number: 5 (lower is better)
Translates to: RRCLPSSLLTMMGTG*SVSSSDSELRLCKL
Trigger: CAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CACTTCGTACCATCTATCCGAGTACGGCTGCTCCAGCTGCGGCTTTaGGAGCTTCATGTCCCTCTCCCGAATGACTTGATTGAGGACATC +
Preference number: 5 (lower is better)
Translates to: HFVPSIRVRLLQLRL*ELHVPLPNDLIEDI
Trigger: GATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GATCTGAAAGCGAATTCTCAAACACCTCCACTGGGAAGAACATGCTaGAGTAAGACAGGGCTTCATCTGGGTGGCCCCGGCCCTGCTCAT +
Preference number: 5 (lower is better)
Translates to: DLKANSQTPPLGRTC*SKTGLHLGGPGPAH
Trigger: ATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CCACTGAATCCAGGGAGTCTGGCGTCTCCACAGACTGCTCTGAGGTaGGGATGGGTGTTGACAAACTGTCTTCTAAGAGGCTATCTTGGC +
Preference number: 5 (lower is better)
Translates to: PLNPGSLASPQTALR*GWVLTNCLLRGYLG
Trigger: GCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp TGCAAGGAGTTCATTGGTATTTGTACCTGTGGAGGCCAGGGTGCATaGGCGATCTTCCTGTGTGTCCAGGTCATCGCAGCTGCTAGGTTC +
Preference number: 5 (lower is better)
Translates to: CKEFIGICTCGGQGA*AIFLCVQVIAAARF
Trigger: GAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGAAAGTGTCCTGCTCCTaGGGGCTTGCACTGACTTTT +
Preference number: 5 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQKVSCS*GLALTF
Trigger: AAAAGTCAGTGCAAGCCCCAAGGAGCAGGACACTTT...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp ATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCAGAGTACCCACCTTATATAGAGCTCCAGCTGCGGCTTaGGGAGCTTCATGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: ISKHERQGRLLRVPTLYRAPAAA*GASCPS
Trigger: AGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGC...TCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CTGTCTGGTGCCAGTCAGCATGGAGTGGATTGCGTTGCTCAGGTGGACAAGCAGTTATGGGGCTTTTCTTaGTCAGACTGGCAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LSGASQHGVDCVAQVDKQLWGFS*SDWQVS
Trigger: GGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAA...CTGCTTGTCCACCTGAGCAACGCAATCCACTCCATGCTGACTGGCACCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CCTAAAGACAATAAATATGGCTCACTTGTGAGCACTCCCTCCCCTGGTGCGCCTTCTGGCTCCTTCAGCTaGGAGCTCTCCAAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PKDNKYGSLVSTPSPGAPSGSFS*ELSKWL
Trigger: CAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGA...AGGCGCACCAGGGGAGGGAGTGCTCACAAGTGAGCCATATTTATTGTCTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp CCATCCCATCCTCCGAGAGGTCCAGCATCCCAGACACACAAAGTTTaGCAAGGTATTTCCCTTCAATGTCTGGCTCCTTCAGCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: PSHPPRGPASQTHKV*QGISLQCLAPSAWS
Trigger: GCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp AAAAATGTCACTGCCTTCTTTTCCTTCTTCCAGTCTTCCGGCAGCTaGTCAATGGCCTCGGCAGCTGAGGGTTTCAGCAAACTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: KNVTAFFSFFQSSGS*SMASAAEGFSKLRR
Trigger: CCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GGGAGAAGTCATCGTCCCATTCAAAGCCTCCGCCTTCTTCATCCGTaGAACTTTCGGAATTCATGCACCTCCCTAGGTAGGGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: GRSHRPIQSLRLLHP*NFRNSCTSLGRGNL
Trigger: CAAGTTCCCCCTACCTAGGGAGGTGCATGAATTCCGAAAGTTCCACGGATGAAGAAGGCGGAGGCTTTGAATGGGACGATGACTTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GGCGTTCTCAGGCTGAGGAGCTGCCTGTCTCTTTTCCCGGCCTTGGGGACAGACAGCAGGAAACACAGTTaGCAATTAACACTATCAGTA +
Preference number: 5 (lower is better)
Translates to: GVLRLRSCLSLFPALGTDSRKHS*QLTLSV
Trigger: TACTGATAGTGTTAATTGCAAACTGTGTTTCCTGCT...GTCTGTCCCCAAGGCCGGGAAAAGAGACAGGCAGCTCCTCAGCCTGAGAACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACACTGTTGGTGTCGGGCTaGAGAGCAGTCCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTLLVSG*RAVHCC
Trigger: ACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAG...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GCTGAAGATGTGAAATCCCTTTCAGAACAAGAGGAGAGCTGGGTGCTTGGTACAGGGTCCAGTCCCAGATaGCTGCTGCTTTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AEDVKSLSEQEESWVLGTGSSPR*LLLFSS
Trigger: GGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACCC...TGTACCAAGCACCCAGCTCTCCTCTTGTTCTGAAAGGGATTTCACATCTTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp ATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCAGAGTACCCACCTTATATAGATGGGGTCATCCAGGCTaGAACTCAAGATGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: ISKHERQGRLLRVPTLYRWGHPG*NSRWLA
Trigger: AGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCA...TCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp ATTTCAAAGCACGAGAGGCAGGGCAGGCTGCTCAGAGTACCCACCTTATATAGAATGACAATGACCGGGTaGGGAGGCAAACTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: ISKHERQGRLLRVPTLYRMTMTG*GGKLLW
Trigger: CCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCAT...TCTATATAAGGTGGGTACTCTGAGCAGCCTGCCCTGCCTCTCGTGCTTTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp TTTGAAGAGAAGGCTTGGAACCCAGAAGGCTTGTTGTCTTTGACATaGAAGGGTCCGGGGAGAAGTCATCGTCCCATTCAAAGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: FEEKAWNPEGLLSLT*KGPGRSHRPIQSLR
Trigger: GCGGAGGCTTTGAATGGGACGATGACTTCTCCCCGGACCCTTTCATGTCAAAGACAACAAGCCTTCTGGGTTCCAAGCCTTCTCTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp GGAGGTTTGAAGAGAAGGCTTGGAACCCAGAAGGCTTGTTGTCTTTaGCATGAAAGGGTCCGGGGAGAAGTCATCGTCCCATTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: GGLKRRLGTQKACCL*HERVRGEVIVPFKA
Trigger: GGCTTTGAATGGGACGATGACTTCTCCCCGGACCCTTTCATGTCAAAGACAACAAGCCTTCTGGGTTCCAAGCCTTCTCTTCAAACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GGAGTCCTCGGGGACTCTGACATCTCTAAAGGATTTGGTTTCTTCTaGCTTCAGAATTGGGTCTGTGGGGGCAGTAGGAGATCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GVLGDSDISKGFGFF*LQNWVCGGSRRSFF
Trigger: GAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp AGAATTCTGCAAAGTAGACACCCGACTTTGATCTGGCTTGTCCTGTaGGGCTTCCAGGCAGCCTTCTCTGACATCAGAGCTTTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RILQSRHPTLIWLVL*GFQAAFSDIRAFFW
Trigger: CCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GTGTGGAACTCATGTATGCAAGGAGTTCATTGGTATTTGTACCTGTaGAGGCCAGGGTGCATGGGCGATCTTCCTGTGTGTCCAGGTCAT +
Preference number: 5 (lower is better)
Translates to: VWNSCMQGVHWYLYL*RPGCMGDLPVCPGH
Trigger: ATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CCTCGTCGTTCACAGGACAGGACTCTCTGGAAGCATCAGCTGGTGTaGGCTGCAATGTTTCTTGTAGTTCTGAGTGACAAGAATTCTGCA +
Preference number: 5 (lower is better)
Translates to: PRRSQDRTLWKHQLV*AAMFLVVLSDKNSA
Trigger: TGCAGAATTCTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGAACGACGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GCGTGTTATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACCCACTGTCATCTTGCTaGCCAGGGCCAGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: ACYTKSSLPCNDTEDLSHPLSSC*PGPGSE
Trigger: TTCAGATCCTGGCCCTGGCAAGCAAGATGACAGTGG...GTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CCTAAAGACAATAAATATGGCTCACTTGTGAGCACTCCCTCCCCTGGTGCGCCTAGGTGGGGATGGGTGTaGACAAACTGTCTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: PKDNKYGSLVSTPSPGAPRWGWV*TNCLLR
Trigger: TCTTAGAAGACAGTTTGTCAACACCCATCCCCACCT...AGGCGCACCAGGGGAGGGAGTGCTCACAAGTGAGCCATATTTATTGTCTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp CTCCAAGTGGCTGGGCAAAGATTTATCCAGTGTGGAACTCATGTATaGAAGGAGTTCATTGGTATTTGTACCTGTGGAGGCCAGGGTGCA +
Preference number: 5 (lower is better)
Translates to: LQVAGQRFIQCGTHV*KEFIGICTCGGQGA
Trigger: TGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp CATCCCAGACACACAAAGTTTGCCAAGGTATTTCCCTTCAATGTCTaGCTCCTTCAGCTTGGAGCTCTCCAAGTGGCTGGGCAAAGATTT +
Preference number: 5 (lower is better)
Translates to: HPRHTKFAKVFPFNV*LLQLGALQVAGQRF
Trigger: AAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp CACCTCTTCAGGGATTTCTACCAAAAGAATTTCAAAGCACGAGAGGCAGGGCAGTCTGGCTCCGAGTCATaGTCTGAGAAGTATGCAGAG +
Preference number: 5 (lower is better)
Translates to: HLFRDFYQKNFKAREAGQSGSES*SEKYAE
Trigger: CTCTGCATACTTCTCAGACAATGACTCGGAGCCAGA...CTGCCCTGCCTCTCGTGCTTTGAAATTCTTTTGGTAGAAATCCCTGAAGAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GCGTGTTATACAAAGTCTTCCCTTCCATGCAACGACACAGAAGATCTATCCCACGAGAAGCTGGCAATGTaGGCAGGAGAGATGGAGAAC +
Preference number: 5 (lower is better)
Translates to: ACYTKSSLPCNDTEDLSHEKLAM*AGEMEN
Trigger: GTTCTCCATCTCTCCTGCCAACATTGCCAGCTTCTC...GTGGGATAGATCTTCTGTGTCGTTGCATGGAAGGGAAGACTTTGTATAACACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp GACTCCAACAGTGCTGAGGTAAAACCTGCATTCTTGAGTTCTGTTTaGAGGTCGCTCACTTGCTCCTTGGTAGTCAGAGAGCCTTTCAGT +
Preference number: 5 (lower is better)
Translates to: DSNSAEVKPAFLSSV*RSLTCSLVVREPFS
Trigger: ACTGAAAGGCTCTCTGACTACCAAGGAGCAAGTGAGCGACCTTCAAACAGAACTCAAGAATGCAGGTTTTACCTCAGCACTGTTGGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp CCTCTCCCGAATGACTTGATTGAGGACATCCAGGTCAGAAAGGTTTaGATACGGCTGAGCAGCATTGTTGAAGAGTTCCCAAAGTGTTAC +
Preference number: 5 (lower is better)
Translates to: PLPNDLIEDIQVRKV*IRLSSIVEEFPKCY
Trigger: GTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp GCAAAGATTTATCCAGTGTGGAACTCATGTATGCAAGGAGTTCATTaGTATTTGTACCTGTGGAGGCCAGGGTGCATGGGCGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: AKIYPVWNSCMQGVH*YLYLWRPGCMGDLP
Trigger: AGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp TATTTCCCTTCAATGTCTGGCTCCTTCAGCTTGGAGCTCTCCAAGTaGCTGGGCAAAGATTTATCCAGTGTGGAACTCATGTATGCAAGG +
Preference number: 5 (lower is better)
Translates to: YFPSMSGSFSLELSK*LGKDLSSVELMYAR
Trigger: CCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 90 bp AAAGTTTGCCAAGGTATTTCCCTTCAATGTCTGGCTCCTTCAGCTTaGAGCTCTCCAAGTGGCTGGGCAAAGATTTATCCAGTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: KVCQGISLQCLAPSA*SSPSGWAKIYPVWN
Trigger: GTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 90 bp TTCCTGGTCAAACAGATAAACGGTGACATCATCGAAAAATGTCACTaGCTTCTTTTCCTTCTTCCAGTCTTCCGGCAGCTGCTCAATGGC +
Preference number: 5 (lower is better)
Translates to: FLVKQINGDIIEKCH*LLFLLPVFRQLLNG
Trigger: GCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 90 bp GGACATCCAGGTCAGAAAGGTTTGCATACGGCTGAGCAGCATTGTTaGAGAGTTCCCAAAGTGTTACACCTAAGGACCAGATATTACTGT +
Preference number: 5 (lower is better)
Translates to: GHPGQKGLHTAEQHC*RVPKVLHLRTRYYC
Trigger: ACAGTAATATCTGGTCCTTAGGTGTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS-3UTR CAA 90 bp GAAGCTATCAAGAGGGACTTGGAGGGCTCATTATTTTTATTAGAGGACTTAAAGAGGTCACTAAATAGGTaGAAAGGGCTCCCAGGGATG +
Preference number: 5 (lower is better)
Translates to: EAIKRDLEGSLFLLEDLKRSLNR*KGLPGM
Trigger: CATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCT...CTTTAAGTCCTCTAATAAAAATAATGAGCCCTCCAAGTCCCTCTTGATAGCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp GAGAACCGGGAGCAGGGGGACACGTGCGGCCAGCTCTaGTCTGCGCTCCTGGCCGGTGGGGGAGGAGAGAAG +
Preference number: 6 (lower is better)
Translates to: ENREQGDTCGQL*SALLAGGGGEK
Trigger: CTTCTCTCCTCCCCCACCGGCCAGGAGCGCAGAGCAGAGCTGGCCGCACGTGTCCCCCTGCTCCCGGTTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp CTAGGTAGGGGGAACTTGAGGACGCTGCTGGGCTGCTaGGCCCAGGGCCATGTGCTTCTCCCCCGCAGTGCC +
Preference number: 6 (lower is better)
Translates to: LGRGNLRTLLGC*AQGHVLLPRSA
Trigger: GGCACTGCGGGGGAGAAGCACATGGCCCTGGGCCCAGCAGCCCAGCAGCGTCCTCAAGTTCCCCCTACCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp TCCCTAGGTAGGGGGAACTTGAGGACGCTGCTGGGCTaGTGGGCCCAGGGCCATGTGCTTCTCCCCCGCAGT +
Preference number: 6 (lower is better)
Translates to: SLGRGNLRTLLG*WAQGHVLLPRS
Trigger: ACTGCGGGGGAGAAGCACATGGCCCTGGGCCCAGCAGCCCAGCAGCGTCCTCAAGTTCCCCCTACCTAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TACAACAGGTACTTCCCCTGCACCTGTTTGCGGAAGTaGCGCGGCCCGGGCACAGCCGACCGTCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: YNRYFPCTCLRK*RGPGTADRQEQ
Trigger: CTGCTCCTGACGGTCGGCTGTGCCCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAAGTACCTGTTGTA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp ACTGCTGTGGCCACTGTCACCTGCTGCAGCTGCGTCTaGGTCAGCAGTGCCTTCGGGTGCAGGGTGCAGGGT +
Preference number: 6 (lower is better)
Translates to: TAVATVTCCSCV*VSSAFGCRVQG
Trigger: ACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp GGAACTTCTACAACAGGTACTTCCCCTGCACCTGTTTaGGGAAGTGGCGCGGCCCGGGCACAGCCGACCGTC +
Preference number: 6 (lower is better)
Translates to: GTSTTGTSPAPV*GSGAARAQPTV
Trigger: GACGGTCGGCTGTGCCCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAAGTACCTGTTGTAGAAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp GGGAACTTCTACAACAGGTACTTCCCCTGCACCTGTTaGCGGAAGTGGCGCGGCCCGGGCACAGCCGACCGT +
Preference number: 6 (lower is better)
Translates to: GNFYNRYFPCTC*RKWRGPGTADR
Trigger: ACGGTCGGCTGTGCCCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAAGTACCTGTTGTAGAAGTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp GCACCTCTGTGGCCATCGCCTGCATCCGAGATGACAATGACCGGGTaGGGAGGCAAACTGCTGTGGCCACTGTCACCTGCTGCAGCTGCG +
Preference number: 6 (lower is better)
Translates to: APLWPSPASEMTMTG*GGKLLWPLSPAAAA
Trigger: CGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp CGCAGGGCCAGATCACTGTGCAGAAAGTGCAGCTTGTaGATGGCTGCCAGCCCTGCGGCAATCTCACACGCC +
Preference number: 6 (lower is better)
Translates to: RRARSLCRKCSL*MAASPAAISHA
Trigger: GGCGTGTGAGATTGCCGCAGGGCTGGCAGCCATGCACAAGCTGCACTTTCTGCACAGTGATCTGGCCCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp AAACAAGGAGGGAACTTCTACAACAGGTACTTCCCCTGCACCTGTTaGCGGAAGTGGCGCGGCCCGGGCACAGCCGACCGTCAGGAGCAG +
Preference number: 6 (lower is better)
Translates to: KQGGNFYNRYFPCTC*RKWRGPGTADRQEQ
Trigger: CTGCTCCTGACGGTCGGCTGTGCCCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAAGTACCTGTTGTAGAAGTTCCCTCCTTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp GCTTCATCTGGGTGGCCCCGGCCCTGCTCATCAAAATGGTCGTGCTaGGCAGCCTCCCACACATACTCAAAGCTCAGGCCCTGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: ASSGWPRPCSSKWSC*AASHTYSKLRPWLV
Trigger: GACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp CCGTGGAACTTTCGGAATTCATGCACCTCCCTAGGTAGGGGGAACTaGAGGACGCTGCTGGGCTGCTGGGCCCAGGGCCATGTGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PWNFRNSCTSLGRGN*RTLLGCWAQGHVLL
Trigger: GAGAAGCACATGGCCCTGGGCCCAGCAGCCCAGCAGCGTCCTCAAGTTCCCCCTACCTAGGGAGGTGCATGAATTCCGAAAGTTCCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp CTGGGGAGGCCTGTGGTGAGGTACCACTGTGACGCCTaGCACCTGCACCTTCATTCTGTCCACGCGTGTCTC +
Preference number: 6 (lower is better)
Translates to: LGRPVVRYHCDA*HLHLHSVHACL
Trigger: GAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp GCGGCTGGCCTCTTGTCAGGAGGCAGCCAGCAGAACTaGAGCACTTCGTACCATCTATCCGAGTACGGCTGC +
Preference number: 6 (lower is better)
Translates to: AAGLLSGGSQQN*STSYHLSEYGC
Trigger: GCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCCTCCTGACAAGAGGCCAGCCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp TCCCTGCTGTTGGTGTCGGGCTTGAGAGCAGTCCACTaGTGTTCAAAGTCGACCTCCGAGTCCCGCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SLLLVSGLRAVH*CSKSTSESRWL
Trigger: GAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp TTTCGGAATTCATGCACCTCCCTAGGTAGGGGGAACTaGAGGACGCTGCTGGGCTGCTGGGCCCAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: FRNSCTSLGRGN*RTLLGCWAQGH
Trigger: ATGGCCCTGGGCCCAGCAGCCCAGCAGCGTCCTCAAGTTCCCCCTACCTAGGGAGGTGCATGAATTCCGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp GCTGGTAGAATCCGAGGAGAGGGCAGACGCCAAGGCTaGATCCTCCGGGGCAGCCTTAGAGTTAAGCTGGTT +
Preference number: 6 (lower is better)
Translates to: AGRIRGEGRRQG*ILRGSLRVKLV
Trigger: AACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp CTGAGGAGGACCTTCAGCACCTCTGTGGCCATCGCCTaGATCCGAGATGACAATGACCGGGTTGGGAGGCAA +
Preference number: 6 (lower is better)
Translates to: LRRTFSTSVAIA*IRDDNDRVGRQ
Trigger: TTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp TTCCGCAGGGCCAGATCACTGTGCAGAAAGTGCAGCTaGTGCATGGCTGCCAGCCCTGCGGCAATCTCACAC +
Preference number: 6 (lower is better)
Translates to: FRRARSLCRKCS*CMAASPAAISH
Trigger: GTGTGAGATTGCCGCAGGGCTGGCAGCCATGCACAAGCTGCACTTTCTGCACAGTGATCTGGCCCTGCGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp TGGCCATCGCCTGCATCCGAGATGACAATGACCGGGTaGGGAGGCAAACTGCTGTGGCCACTGTCACCTGCT +
Preference number: 6 (lower is better)
Translates to: WPSPASEMTMTG*GGKLLWPLSPA
Trigger: AGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp CCTTCCACAGAAGCCTGGAACTGGGATGGAGCTGGAAGTGAGATGTaGGGCACTGAGAGCGTGAAGACCTCTGCTGGGGACTGGATGGAC +
Preference number: 6 (lower is better)
Translates to: PSTEAWNWDGAGSEM*GTESVKTSAGDWMD
Trigger: GTCCATCCAGTCCCCAGCAGAGGTCTTCACGCTCTCAGTGCCCAACATCTCACTTCCAGCTCCATCCCAGTTCCAGGCTTCTGTGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp GGGTGCTCCGTGTCGTCTTCAGACTCAGAGCTTAGGCTGTGCAAGTaGAAGGCTCGAAGGTCCTCGTCCGAGTCGTCGCTGTTCTCATCC +
Preference number: 6 (lower is better)
Translates to: GCSVSSSDSELRLCK*KARRSSSESSLFSS
Trigger: GGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp AAACAAGGAGGGAACTTCTACAACAGGTACTTCCCCTaGACCTGTTTGCGGAAGTGGCGCGGCCCGGGCACA +
Preference number: 6 (lower is better)
Translates to: KQGGNFYNRYFP*TCLRKWRGPGT
Trigger: TGTGCCCGGGCCGCGCCACTTCCGCAAACAGGTGCAGGGGAAGTACCTGTTGTAGAAGTTCCCTCCTTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp GCTTCATCTGGGTGGCCCCGGCCCTGCTCATCAAAATaGTCGTGCTTGGCAGCCTCCCACACATACTCAAAG +
Preference number: 6 (lower is better)
Translates to: ASSGWPRPCSSK*SCLAASHTYSK
Trigger: CTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp GGGTGTCTGTTGGTTAGACTCAAGGCCTCCTTGCTTTaGCAAGTGACGTCTGGGGGTCTGTTGCCCCCATCG +
Preference number: 6 (lower is better)
Translates to: GCLLVRLKASLL*QVTSGGLLPPS
Trigger: CGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACAGACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp GCAGGCTTATCGGGAGGCAAGAGTTTCCGAGGGGTGTaGGAGCCTAGGGACTCTAGCAATGCTTCACGGACA +
Preference number: 6 (lower is better)
Translates to: AGLSGGKSFRGV*EPRDSSNASRT
Trigger: TGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp ACTTCGTACCATCTATCCGAGTACGGCTGCTCCAGCTaGGGCTTTGGGAGCTTCATGTCCCTCTCCCGAATG +
Preference number: 6 (lower is better)
Translates to: TSYHLSEYGCSS*GFGSFMSLSRM
Trigger: CATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TGGGAAGAACATGCTGGAGTAAGACAGGGCTTCATCTaGGTGGCCCCGGCCCTGCTCATCAAAATGGTCGTG +
Preference number: 6 (lower is better)
Translates to: WEEHAGVRQGFI*VAPALLIKMVV
Trigger: CACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp GCGAATTCTCAAACACCTCCACTGGGAAGAACATGCTaGAGTAAGACAGGGCTTCATCTGGGTGGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: ANSQTPPLGRTC*SKTGLHLGGPG
Trigger: GCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp GCCCTTTACCAACACCAGGGCATTGGCAGATGTTCCTaGGACCTCCTCGGGCTTTTTATCTGGCTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: ALYQHQGIGRCS*DLLGLFIWLRV
Trigger: GACTCGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp GTGTCGTCTTCAGACTCAGAGCTTAGGCTGTGCAAGTaGAAGGCTCGAAGGTCCTCGTCCGAGTCGTCGCTG +
Preference number: 6 (lower is better)
Translates to: VSSSDSELRLCK*KARRSSSESSL
Trigger: CAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp GCCACTCCCGATCTCCTGTATGTAGTTGAGACTGTGGCGGGCGACTaGAGACTTCAAACCTTCCACAGAAGCCTGGAACTGGGATGGAGC +
Preference number: 6 (lower is better)
Translates to: ATPDLLYVVETVAGD*RLQTFHRSLELGWS
Trigger: GCTCCATCCCAGTTCCAGGCTTCTGTGGAAGGTTTGAAGTCTCAAGTCGCCCGCCACAGTCTCAACTACATACAGGAGATCGGGAGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp TGTTGGTTAGACTCAAGGCCTCCTTGCTTTGGCAAGTaGCGTCTGGGGGTCTGTTGCCCCCATCGAGGGTTT +
Preference number: 6 (lower is better)
Translates to: CWLDSRPPCFGK*RLGVCCPHRGF
Trigger: AAACCCTCGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp CTGGCTTGTCCTGTGGGGCTTCCAGGCAGCCTTCTCTaGCATCAGAGCTTTCTTCTGGGACAACTGACTCAG +
Preference number: 6 (lower is better)
Translates to: LACPVGLPGSLL*HQSFLLGQLTQ
Trigger: CTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp TGTCGTCTTCAGACTCAGAGCTTAGGCTGTGCAAGTTaGAGGCTCGAAGGTCCTCGTCCGAGTCGTCGCTGT +
Preference number: 6 (lower is better)
Translates to: CRLQTQSLGCAS*RLEGPRPSRRC
Trigger: ACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp GGAGTTCATTGGTATTTGTACCTGTGGAGGCCAGGGTaGATGGGCGATCTTCCTGTGTGTCCAGGTCATCGC +
Preference number: 6 (lower is better)
Translates to: GVHWYLYLWRPG*MGDLPVCPGHR
Trigger: GCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp GCCTCGGCAGCTGAGGGTTTCAGCAAACTCCGCAGGTaGCTACCATCATCGTTACTGACAATGATGGGCACA +
Preference number: 6 (lower is better)
Translates to: ASAAEGFSKLRR*LPSSLLTMMGT
Trigger: TGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp CTGCGGCAATCTCACACGCCATCCTCTGTAGCAGCATaGTCTGTGAATCACCCCGCACGTGTTCTTGCTCAT +
Preference number: 6 (lower is better)
Translates to: LRQSHTPSSVAA*SVNHPARVLAH
Trigger: ATGAGCAAGAACACGTGCGGGGTGATTCACAGACCATGCTGCTACAGAGGATGGCGTGTGAGATTGCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp CCATCTATCCGAGTACGGCTGCTCCAGCTGCGGCTTTaGGAGCTTCATGTCCCTCTCCCGAATGACTTGATT +
Preference number: 6 (lower is better)
Translates to: PSIRVRLLQLRL*ELHVPLPNDLI
Trigger: AATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp GGTAGGGGATGGCTTCCACACACTGCCCCACACACTGGAGGACATTaGGATGCTGGAGGATGTAGTAAGGCTCTCCACTCTTCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: GRGWLPHTAPHTGGH*DAGGCSKALHSSGK
Trigger: CTTTCCTGAAGAGTGGAGAGCCTTACTACATCCTCCAGCATCCAAATGTCCTCCAGTGTGTGGGGCAGTGTGTGGAAGCCATCCCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp CTCCAGCTGCGGCTTTGGGAGCTTCATGTCCCTCTCCCGAATGACTaGATTGAGGACATCCAGGTCAGAAAGGTTTGCATACGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LQLRLWELHVPLPND*IEDIQVRKVCIRLS
Trigger: GCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp TTCCTGTGTGTCCAGGTCATCGCAGCTGCTAGGTTCTaGATTCAACAAACTCAAGGGGCTGCTGGCCTCGTC +
Preference number: 6 (lower is better)
Translates to: FLCVQVIAAARF*IQQTQGAAGLV
Trigger: GACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp CTGGATGTAGTAGTCACTTCCAACAGAGAGGTTGTGTaGATCAAACACAGGAACCACCCCAGGGGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: LDVVVTSNREVV*IKHRNHPRGPH
Trigger: GTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp ACTGCCTTCTTTTCCTTCTTCCAGTCTTCCGGCAGCTaGTCAATGGCCTCGGCAGCTGAGGGTTTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: TAFFSFFQSSGS*SMASAAEGFSK
Trigger: TTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp GGTGAGCACTGCTCTGGAAGAAATCCTCTTCTGTCCTaGGTTCCTCAGCCCCAGCCCTCTCTAGCTTATCTA +
Preference number: 6 (lower is better)
Translates to: GEHCSGRNPLLS*VPQPQPSLAYL
Trigger: TAGATAAGCTAGAGAGGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATTTCTTCCAGAGCAGTGCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp AAGGCTGCATCCTCCGGGGCAGCCTTAGAGTTAAGCTaGTTTAAAGTCTCCGCAGCTTCCGAGTGTTTCTCC +
Preference number: 6 (lower is better)
Translates to: KAASSGAALELS*FKVSAASECFS
Trigger: GGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp GAGCTTTCTTCTGGGACAACTGACTCAGGTGGGGACTaGCCCTTTACCAACACCAGGGCATTGGCAGATGTT +
Preference number: 6 (lower is better)
Translates to: ELSSGTTDSGGD*PFTNTRALADV
Trigger: AACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp CAAAGTAGACACCCGACTTTGATCTGGCTTGTCCTGTaGGGCTTCCAGGCAGCCTTCTCTGACATCAGAGCT +
Preference number: 6 (lower is better)
Translates to: QSRHPTLIWLVL*GFQAAFSDIRA
Trigger: AGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp GTCTCCGTCTTCACTGCTGCCTCCTTGTTCAATGTCTaGGTCCGTGAGGTGTGTGAGAGAGAAGCTGGCAAT +
Preference number: 6 (lower is better)
Translates to: VSVFTAASLFNV*VREVCEREAGN
Trigger: ATTGCCAGCTTCTCTCTCACACACCTCACGGACTCAGACATTGAACAAGGAGGCAGCAGTGAAGACGGAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp AAAGCGAATTCTCAAACACCTCCACTGGGAAGAACATaGTGGAGTAAGACAGGGCTTCATCTGGGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: KANSQTPPLGRT*WSKTGLHLGGP
Trigger: GGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp CTACCATCATCGTTACTGACAATGATGGGCACAGGGTaGTCCGTGTCGTCTTCAGACTCAGAGCTTAGGCTG +
Preference number: 6 (lower is better)
Translates to: LPSSLLTMMGTG*SVSSSDSELRL
Trigger: CAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TATGGGGCTTTTCTTTGTCAGACTGGCAGGTGTCCTTaGGGTCATCCAGGCTTGAACTCAAGATGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: YGAFLCQTGRCP*GHPGLNSRWLA
Trigger: AGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TCTGATAAGCACAGAGGGCCCTGGTCCAAGAGCTTATaGGGCTTTTCTTTGTCAGACTGGCAGGTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: SDKHRGPWSKSL*GFSLSDWQVSL
Trigger: CAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTTATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp GGCAGGTCATCTGCTTTGTCAAGGTCACTAAATAGGTaGAAAGGGCTCCCAGGGATGCTGGTAGCACGTGAG +
Preference number: 6 (lower is better)
Translates to: GRSSALSRSLNR*KGLPGMLVARE
Trigger: CTCACGTGCTACCAGCATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCTTGACAAAGCAGATGACCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp TCCATCCCATCCTCCGAGAGGTCCAGCATCCCAGACACACAAAGTTaGCCAAGGTATTTCCCTTCAATGTCTGGCTCCTTCAGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: SIPSSERSSIPDTQS*PRYFPSMSGSFSLE
Trigger: CTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp TCCAAGCAGATGGAGTCCTCGGGGACTCTGACATCTCTAAAGGATTaGGTTTCTTCTGGCTTCAGAATTGGGTCTGTGGGGGCAGTAGGA +
Preference number: 6 (lower is better)
Translates to: SKQMESSGTLTSLKD*VSSGFRIGSVGAVG
Trigger: TCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCATCTGCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp CCTCCGAGAGGTCCAGCATCCCAGACACACAAAGTTTaGCAAGGTATTTCCCTTCAATGTCTGGCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: PPRGPASQTHKV*QGISLQCLAPS
Trigger: TGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp ATGGGTGTTGACAAACTGTCTTCTAAGAGGCTATCTTaGCTGGTAGAATCCGAGGAGAGGGCAGACGCCAAG +
Preference number: 6 (lower is better)
Translates to: MGVDKLSSKRLS*LVESEERADAK
Trigger: CTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp AGTCTGGCGTCTCCACAGACTGCTCTGAGGTGGGGATaGGTGTTGACAAACTGTCTTCTAAGAGGCTATCTT +
Preference number: 6 (lower is better)
Translates to: SLASPQTALRWG*VLTNCLLRGYL
Trigger: AAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp ACAAGAATTCTGCAAAGTAGACACCCGACTTTGATCTaGCTTGTCCTGTGGGGCTTCCAGGCAGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: TRILQSRHPTLI*LVLWGFQAAFS
Trigger: AGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp CACACAAAGTTTGCCAAGGTATTTCCCTTCAATGTCTaGCTCCTTCAGCTTGGAGCTCTCCAAGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: HTKFAKVFPFNV*LLQLGALQVAG
Trigger: CCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp GATCTCCTGTATGTAGTTGAGACTGTGGCGGGCGACTaGAGACTTCAAACCTTCCACAGAAGCCTGGAACTG +
Preference number: 6 (lower is better)
Translates to: DLLYVVETVAGD*RLQTFHRSLEL
Trigger: CAGTTCCAGGCTTCTGTGGAAGGTTTGAAGTCTCAAGTCGCCCGCCACAGTCTCAACTACATACAGGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp TCCTCCGAGAGGTCCAGCATCCCAGACACACAAAGTTaGCCAAGGTATTTCCCTTCAATGTCTGGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSERSSIPDTQS*PRYFPSMSGSF
Trigger: GAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp GGCTTTGGGAGCTTCATGTCCCTCTCCCGAATGACTTaGTTGAGGACATCCAGGTCAGAAAGGTTTGCATAC +
Preference number: 6 (lower is better)
Translates to: GFGSFMSLSRMT*LRTSRSERFAY
Trigger: GTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TCCAGGAACTCAAGTTCAGAACTTTCAGAGCCTCTCTaGGGTGACTCCAACAGTGCTGAGGTAAAACCTGCA +
Preference number: 6 (lower is better)
Translates to: SRNSSSELSEPL*GDSNSAEVKPA
Trigger: TGCAGGTTTTACCTCAGCACTGTTGGAGTCACCCCAGAGAGGCTCTGAAAGTTCTGAACTTGAGTTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TCACAGGACAGGACTCTCTGGAAGCATCAGCTGGTGTaGGCTGCAATGTTTCTTGTAGTTCTGAGTGACAAG +
Preference number: 6 (lower is better)
Translates to: SQDRTLWKHQLV*AAMFLVVLSDK
Trigger: CTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TCATGTATGCAAGGAGTTCATTGGTATTTGTACCTGTaGAGGCCAGGGTGCATGGGCGATCTTCCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: SCMQGVHWYLYL*RPGCMGDLPVC
Trigger: ACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp TATCCAGTGTGGAACTCATGTATGCAAGGAGTTCATTaGTATTTGTACCTGTGGAGGCCAGGGTGCATGGGC +
Preference number: 6 (lower is better)
Translates to: YPVWNSCMQGVH*YLYLWRPGCMG
Trigger: GCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp CGGCTTTGGGAGCTTCATGTCCCTCTCCCGAATGACTaGATTGAGGACATCCAGGTCAGAAAGGTTTGCATA +
Preference number: 6 (lower is better)
Translates to: RLWELHVPLPND*IEDIQVRKVCI
Trigger: TATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp ATGGAGTCCTCGGGGACTCTGACATCTCTAAAGGATTaGGTTTCTTCTGGCTTCAGAATTGGGTCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: MESSGTLTSLKD*VSSGFRIGSVG
Trigger: CCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp GTGTGGAACTCATGTATGCAAGGAGTTCATTGGTATTaGTACCTGTGGAGGCCAGGGTGCATGGGCGATCTT +
Preference number: 6 (lower is better)
Translates to: VWNSCMQGVHWY*YLWRPGCMGDL
Trigger: AAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp CCAAGGTATTTCCCTTCAATGTCTGGCTCCTTCAGCTaGGAGCTCTCCAAGTGGCTGGGCAAAGATTTATCC +
Preference number: 6 (lower is better)
Translates to: PRYFPSMSGSFS*ELSKWLGKDLS
Trigger: GGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp GGCAAAGATTTATCCAGTGTGGAACTCATGTATGCAAGGAGTTCATaGGTATTTGTACCTGTGGAGGCCAGGGTGCATGGGCGATCTTCC +
Preference number: 6 (lower is better)
Translates to: GKDLSSVELMYARSS*VFVPVEARVHGRSS
Trigger: GGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp TGTCTCGATTCTGGAAGACAACTCTCCACGCTACCCTaGGCAGTAATATCATTCACAAGGATGGGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: CLDSGRQLSTLP*AVISFTRMGCL
Trigger: CAGACACCCCATCCTTGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAGTTGTCTTCCAGAATCGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp CAAGGTATTTCCCTTCAATGTCTGGCTCCTTCAGCTTaGAGCTCTCCAAGTGGCTGGGCAAAGATTTATCCA +
Preference number: 6 (lower is better)
Translates to: QGISLQCLAPSA*SSPSGWAKIYP
Trigger: TGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 72 bp TTATCCAGTGTGGAACTCATGTATGCAAGGAGTTCATaGGTATTTGTACCTGTGGAGGCCAGGGTGCATGGG +
Preference number: 6 (lower is better)
Translates to: LSSVELMYARSS*VFVPVEARVHG
Trigger: CCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp ATTTATCCAGTGTGGAACTCATGTATGCAAGGAGTTCATTGGTATTaGTACCTGTGGAGGCCAGGGTGCATGGGCGATCTTCCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: IYPVWNSCMQGVHWY*YLWRPGCMGDLPVC
Trigger: ACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CAA 90 bp CAAAGTTTGCCAAGGTATTTCCCTTCAATGTCTGGCTCCTTCAGCTaGGAGCTCTCCAAGTGGCTGGGCAAAGATTTATCCAGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: QSLPRYFPSMSGSFS*ELSKWLGKDLSSVE
Trigger: TTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp GGTCAGAAAGGTTTGCATACGGCTGAGCAGCATTGTTaGAGAGTTCCCAAAGTGTTACACCTAAGGACCAGA +
Preference number: 6 (lower is better)
Translates to: GQKGLHTAEQHC*RVPKVLHLRTR
Trigger: TCTGGTCCTTAGGTGTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp TTGAGGACATCCAGGTCAGAAAGGTTTGCATACGGCTaGGCAGCATTGTTGAAGAGTTCCCAAAGTGTTACA +
Preference number: 6 (lower is better)
Translates to: LRTSRSERFAYG*AALLKSSQSVT
Trigger: TGTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp AATGACTTGATTGAGGACATCCAGGTCAGAAAGGTTTaGATACGGCTGAGCAGCATTGTTGAAGAGTTCCCA +
Preference number: 6 (lower is better)
Translates to: NDLIEDIQVRKV*IRLSSIVEEFP
Trigger: TGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp GCTGGGCAAAGATTTATCCAGTGTGGAACTCATGTATaGAAGGAGTTCATTGGTATTTGTACCTGTGGAGGC +
Preference number: 6 (lower is better)
Translates to: AGQRFIQCGTHV*KEFIGICTCGG
Trigger: GCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS CCA 72 bp ATCTCTAAAGGATTTGGTTTCTTCTGGCTTCAGAATTaGGTCTGTGGGGGCAGTAGGAGATCCTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: ISKGFGFFWLQN*VCGGSRRSFFC
Trigger: ACAGAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp TTTTCTGACAATTCTTGGACACTCAGTGGATCAAAGTaGTCTTGGTGCAAAAGGCTTTCTGATAAGCACAGA +
Preference number: 6 (lower is better)
Translates to: FSDNSWTLSGSK*SWCKRLSDKHR
Trigger: TCTGTGCTTATCAGAAAGCCTTTTGCACCAAGATCACTTTGATCCACTGAGTGTCCAAGAATTGTCAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS GCA 72 bp CACAGTTTGCAATTAACACTATCAGTATCAATAAACTaGACACCGACAGGATCACAAACAAGGAGGGAACTT +
Preference number: 6 (lower is better)
Translates to: HSLQLTLSVSIN*TPTGSQTRREL
Trigger: AAGTTCCCTCCTTGTTTGTGATCCTGTCGGTGTGCAGTTTATTGATACTGATAGTGTTAATTGCAAACTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8
CDS TCA 72 bp AGGCTTGAACTCAAGATGGCTGGCTTAAAGTCAGCTTaGACTCCATTTAGTTCCATTAGATCAAATATTTTT +
Preference number: 6 (lower is better)
Translates to: RLELKMAGLKSA*TPFSSIRSNIF
Trigger: AAAAATATTTGATCTAATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCCAGCCATCTTGAGTTCAAGCCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041804.8