Pregenerated sensors for LMOD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044086Ensembl transcript IDs: ENSMUST00000095655.4
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTaGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGAAATG | + |
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Preference number: 1 (lower is better) Translates to: LGPVSSHSPNHPQPG*SHGPRSVACTVREM Trigger: CATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| 3UTR GCA 90 bp | AACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTaGACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTA | + |
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Preference number: 1 (lower is better) Translates to: NHPQPGWSHGPRSVA*TVREMASSSELAVL Trigger: TAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| 3UTR CAA 90 bp | CGTGTTGTCTGTGAACATGGGTGTTCTGCATCCTTCCCTTTTCTCTaGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: RVVCEHGCSASFPFL*GLCLLTAQTILSLA Trigger: AGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAGAGAAAAGGGAAGGATGCAGAACACCCATGTTCACAGACAACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| 3UTR GCA 72 bp | CAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTaGACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: QPGWSHGPRSVA*TVREMASSSEL Trigger: AAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| 3UTR CCA 72 bp | GTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTaGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTT | + |
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Preference number: 3 (lower is better) Translates to: VSSHSPNHPQPG*SHGPRSVACTV Trigger: AACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | ATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGCCAAAGGGGACTTCCTaGGCATCGAGGGGCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ILSLAGATAPGPSPALFVPKGTS*ASRGRP Trigger: TGGGCGGCCCCTCGATGCTCAGGAAGTCCCCTTTGG...CACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | CAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGGTCTGTCTGGTTCCCTaGGGGCCTCGCACTTACCTT | + |
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Preference number: 4 (lower is better) Translates to: QTILSLAGATAPGPSPALVCLVP*GPRTYL Trigger: AAGGTAAGTGCGAGGCCCTCAGGGAACCAGACAGAC...CAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | TCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCAGAACTCCTGCATTCTaGGGTCGGGCATGGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SHSPNHPQPGWSHGPRSVRTPAF*GRAWVL Trigger: GAGGACCCATGCCCGACCCCAGAATGCAGGAGTTCT...GACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | CATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGTTGGTTTTCTCCTGTaGCTCTCTGGCTTCCGGCAT | + |
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Preference number: 4 (lower is better) Translates to: HPQPGWSHGPRSVACTVRVGFLL*LSGFRH Trigger: ATGCCGGAAGCCAGAGAGGCACAGGAGAAAACCAAC...ACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | CCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGCCGTCCAGGTCTGTCTaGTTCCCTGAGGGCCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: PGPSPALFVKWPPALSLLPSRSV*FPEGLA Trigger: TGCGAGGCCCTCAGGGAACCAGACAGACCTGGACGG...CAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | CCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTGGGGTCGGGCATaGGTCCTCCCAACCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PGPSPALFVKWPPALSLLFWGRA*VLPTSP Trigger: GGGAGAGGTTGGGAGGACCCATGCCCGACCCCAGAA...CAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | CCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTCAACAGAGTGGTGTTaGCCTTCAGAAGCCTGGATA | + |
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Preference number: 4 (lower is better) Translates to: PSSAWLEPRPQVRRLHCSSTEWC*PSEAWI Trigger: TATCCAGGCTTCTGAAGGCCAACACCACTCTGTTGA...CGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | AAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTGGCCTTCAGAAGCCTaGATATTTCCATCTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: KPSSAWLEPRPQVRRLHCWPSEA*IFPSRR Trigger: ACGCCGAGATGGAAATATCCAGGCTTCTGAAGGCCA...ACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | TCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCTCGTTACCACCATTCTaGGACCCGGAAGCTCGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SHSPNHPQPGWSHGPRSVSLPPF*DPEARN Trigger: ATTTCGAGCTTCCGGGTCCCAGAATGGTGGTAACGA...GACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | TGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCTTGCACTGTaGAGGCTGGGGCGGATTTTT | + |
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Preference number: 4 (lower is better) Translates to: CVFSQPKPSSAWLEPRPQVRLAL*RLGRIF Trigger: AAAAATCCGCCCCAGCCTCCACAGTGCAAGACGGAC...CTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | AGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCCCTATTTCTCGGCACTaGCTTGAGCGTTTTGATTAC | + |
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Preference number: 4 (lower is better) Translates to: SPNHPQPGWSHGPRSVACPISRH*LERFDY Trigger: GTAATCAAAACGCTCAAGCCAGTGCCGAGAAATAGG...GCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | CCCTTTTCTCTTGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCACTGGAGGCACCTCATaGTGGCCACGATGCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PFSLGPVSSHSPNHPQPGTGGTS*WPRCPS Trigger: GGAAGGGCATCGTGGCCATCATGAGGTGCCTCCAGT...GCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAGAGAAAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | GTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTAGGTGAGGGGCCGCCCAGATaGAGGCTGGAAGAACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: VACTVREMASSSELAVLGEGPPR*RLEELL Trigger: CAGGAGTTCTTCCAGCCTGCATCTGGGCGGCCCCTC...ACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | AACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCCGGCATTCGAGATTTaGGCTGAATTCTCTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: NHPQPGWSHGPRSVACTVPAFEI*AEFSSA Trigger: AGCTGAAGAGAATTCAGCGCAAATCTCGAATGCCGG...AACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | TCTTGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCATTTCCCGCAGCATGTTaGCCAGGGCAAACGCTACGC | + |
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Preference number: 4 (lower is better) Translates to: SWACVFSQPKPSSAWLEPFPAAC*PGQTLR Trigger: GCGTAGCGTTTGCCCTGGCCAACATGCTGCGGGAAA...TGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | ACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCAGCGTTTCATTGAACTaGAGGCACCTCATGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: TAPGPSPALFVKWPPALSSVSLN*RHLMMA Trigger: GGCCATCATGAGGTGCCTCCAGTTCAATGAAACGCT...GCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | GTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTAGGTGGGGGTCAGGGGCCATaGCTTCCATCTCTGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: VACTVREMASSSELAVLGGGQGP*LPSLTA Trigger: TGCAGTCAGAGATGGAAGTCATGGCCCCTGACCCCC...ACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | TGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCGCTGGGGCGGATTTTTaGTCATTTCCTTTCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: WSHGPRSVACTVREMASSAGADF*SFPFLN Trigger: GTTCAAGAAAGGAAATGATCAAAAATCCGCCCCAGC...GCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | AACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTATTCGAGATTTGCGCTaGATTCTCTTCAGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: NHPQPGWSHGPRSVACTVIRDLR*ILFSFT Trigger: GGTGAAGCTGAAGAGAATTCAGCGCAAATCTCGAAT...AACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | AAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTGAAGTTTCCTGTGGGTaGCTTGTCTGTTTGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: KPSSAWLEPRPQVRRLHCEVSCG*LVCLIL Trigger: AAGGATCAAACAGACAAGGCACCCACAGGAAACTTC...ACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | CCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGGTGTTTTTCTCAGACTaGACAAAACTGACAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: PSSAWLEPRPQVRRLHCSVFFSD*TKLTGT Trigger: AGTTCCTGTCAGTTTTGTGCAGTCTGAGAAAAACAC...CGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | TCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCTCAACGAGAGACTTATaGTTGAAGTTTCCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SQPKPSSAWLEPRPQVRRSTRDL*LKFPVG Trigger: ACCCACAGGAAACTTCAACCATAAGTCTCTCGTTGA...GCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | TGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGCAATGTTGTTCAGGTTaGGTTCCTTCATGTCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CVFSQPKPSSAWLEPRPQQCCSG*VPSCRG Trigger: ACCCCGACATGAAGGAACTCAACCTGAACAACATTG...CTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | GTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTAGGTTCAGCTTCACCACCCTaGAGGAGTCAGGGTCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: VACTVREMASSSELAVLGSASPP*RSQGPS Trigger: AGACGGACCCTGACTCCTTCAGGGTGGTGAAGCTGA...ACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | ACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCACTTCCATCTCTGACTaGAGTTCCTTCAGCTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TAPGPSPALFVKWPPALSTSISD*SSFSSS Trigger: TGAAGAGCTGAAGGAACTGCAGTCAGAGATGGAAGT...GCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | TGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGATCATTTCCTTTCTTaGACCAAAGGGGACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: CVFSQPKPSSAWLEPRPQDHFLS*TKGDFL Trigger: CAGGAAGTCCCCTTTGGTTCAAGAAAGGAAATGATC...CTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | CCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTGCTCTTTAAGTTGCTaGTGCTGCTGTTCCTCCTGT | + |
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Preference number: 4 (lower is better) Translates to: PGPSPALFVKWPPALSLLCSLSC*CCCSSC Trigger: ACAGGAGGAACAGCAGCAGCAGCAACTTAAAGAGCA...CAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | CCCTTTTCTCTTGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTCTCCTGTGCCTCTCTaGCTTCCGGCATTCGAGATT | + |
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Preference number: 4 (lower is better) Translates to: PFSLGPVSSHSPNHPQPGSPVPL*LPAFEI Trigger: AATCTCGAATGCCGGAAGCCAGAGAGGCACAGGAGA...GCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAGAGAAAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | CCCTTTTCTCTTGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCGGTGCCTTGTCTGTTTaGTCCTTTTGGATCATCCCC | + |
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Preference number: 4 (lower is better) Translates to: PFSLGPVSSHSPNHPQPGGALSV*SFWIIP Trigger: GGGGATGATCCAAAAGGATCAAACAGACAAGGCACC...GCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAGAGAAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | ATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGCTTCTTGTACATTGTTaGTCCCATTTGATTCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: ILSLAGATAPGPSPALFVLLVHC*SHLILF Trigger: AAAGAGAATCAAATGGGAGCAACAATGTACAAGAAG...CACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | CCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTACTCCAGCTCCTTTaGCAGTTGCACAGGTTTAAG | + |
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Preference number: 4 (lower is better) Translates to: PGPSPALFVKWPPALSLLLLQLL*QLHRFK Trigger: CTTAAACCTGTGCAACTGCCAAAGGAGCTGGAGTAA...CAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | GTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTAGGTCTCTGCTCTTTAAGTTaGTGCTGCTGCTGTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VACTVREMASSSELAVLGLCSLS*CCCCSS Trigger: GGAGGAACAGCAGCAGCAGCAACTTAAAGAGCAGAG...ACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGAAATGTCTCACCTTTTTCTTTaGTCTCTGATGTGTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: QPGWSHGPRSVACTVREMSHLFL*SLMCLF Trigger: AAAAAGACACATCAGAGACCAAAGAAAAAGGTGAGA...CATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | GTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTAGGTACTTCACGCTGGTTTTaGGTGTTTTTCTCAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: VACTVREMASSSELAVLGTSRWF*VFFSDC Trigger: GCAGTCTGAGAAAAACACTCAAAACCAGCGTGAAGT...ACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | GTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTAGGTGACTCTGCTCATTCCTCCTGTCGTTTCTaGCTCCGTTTATCCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: VREMASSSELAVLGDSAHSSCRF*LRLSWF Trigger: GAACCAGGATAAACGGAGGCAGAAACGACAGGAGGA...ATGAGCAGAGTCACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | CCTTTTCTCTTGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTATGTCATTCAAGAGCTaGTCTCTGGGAGTGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: PFLLGLCLLTAQTILSLAMSFKS*SLGVIS Trigger: GGAAATCACTCCCAGAGACCAGCTCTTGAATGACAT...AGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAGAGAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | GTTCGTGAAATGGCCTCCAGCTCTGAGCTTGCTGTTCTAGGTGACTCTGCTCATTTAAGTTGCTGCTGCTaGTGTTCCTCCTGTCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: VREMASSSELAVLGDSAHLSCCC*CSSCRF Trigger: GAAACGACAGGAGGAACAGCAGCAGCAGCAACTTAA...ATGAGCAGAGTCACCTAGAACAGCAAGCTCAGAGCTGGAGGCCATTTCACGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CCA 90 bp | GAGAAGAAGAACGTGTTGTCTGTGAACATGGGTGTTCTGCATCCTTCCCTTTTCCGCCCAGATGCAGGCTaGAAGAACTCCTGCATTCTG | + |
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Preference number: 4 (lower is better) Translates to: EKKNVLSVNMGVLHPSLFRPDAG*KNSCIL Trigger: CAGAATGCAGGAGTTCTTCCAGCCTGCATCTGGGCG...GAAAAGGGAAGGATGCAGAACACCCATGTTCACAGACAACACGTTCTTCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| 3UTR CAA 72 bp | CAGGCAAGGCAGTCAAACTCTGAGAAGAAGAACGTGTaGTCTGTGAACATGGGTGTTCTGCATCCTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QARQSNSEKKNV*SVNMGVLHPSL Trigger: AAGGGAAGGATGCAGAACACCCATGTTCACAGACAACACGTTCTTCTTCTCAGAGTTTGACTGCCTTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | GAGAAGAAGAACGTGTTGTCTGTGAACATGGGTGTTCTGCATCCTTCCCTTTTCCATGACTTCCATCTCTaGCTGCAGTTCCTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EKKNVLSVNMGVLHPSLFHDFHL*LQFLQL Trigger: GAGCTGAAGGAACTGCAGTCAGAGATGGAAGTCATG...GAAAAGGGAAGGATGCAGAACACCCATGTTCACAGACAACACGTTCTTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR TCA 90 bp | CAAACGAGGTTAGCTTCTGCTTCTAGAAGCACAACGCTACAATTTTCAGGCAAGTTTTTCTTTGGTCTCTaGTGTGTCTTTTTGCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: QTRLASASRSTTLQFSGKFFFGL*CVFLLV Trigger: CACGAGCAAAAAGACACATCAGAGACCAAAGAAAAA...CTTGCCTGAAAATTGTAGCGTTGTGCTTCTAGAAGCAGAAGCTAACCTCGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR GCA 90 bp | CAAACGAGGTTAGCTTCTGCTTCTAGAAGCACAACGCTACAATTTTCAGGCAAGTTCATCATCATCTTCTaGTTCTTGTACATTGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QTRLASASRSTTLQFSGKFIIIF*FLYIVA Trigger: AGCAACAATGTACAAGAAGCAGAAGATGATGATGAA...CTTGCCTGAAAATTGTAGCGTTGTGCTTCTAGAAGCAGAAGCTAACCTCGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | CACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCACGAGAGACTTATGGTaGAAGTTTCCTGTGGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSPNHPQPGWSHGPRSVATRDLW*KFPVGA Trigger: GGCACCCACAGGAAACTTCAACCATAAGTCTCTCGT...GGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | TCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCTGTTTTAGTAGCCAGTaGCTGGTAGGTGCCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SQPKPSSAWLEPRPQVRRCFSSQ*LVGARI Trigger: AATCCGGGCACCTACCAGCAACTGGCTACTAAAACA...GCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | CACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCATGTTTTTAATGCCCTaGTCTCCTACTTCACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSPNHPQPGWSHGPRSVAMFLMP*SPTSRW Trigger: CCAGCGTGAAGTAGGAGACAAGGGCATTAAAAACAT...GGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | CACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTTTCTCGGCACTGGCTaGAGCGTTTTGATTACATCT | + |
|
Preference number: 5 (lower is better) Translates to: HSPNHPQPGWSHGPRSVAFLGTG*SVLITS Trigger: AGATGTAATCAAAACGCTCAAGCCAGTGCCGAGAAA...GGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS TCA 90 bp | CCGGCATTCGAGATTTGCGCTGAATTCTCTTCAGCTTCACCACCCTaGAGGAGTCAGGGTCCGTCTTGCACTGTGGAGGCTGGGGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PAFEICAEFSSASPP*RSQGPSCTVEAGAD Trigger: ATCCGCCCCAGCCTCCACAGTGCAAGACGGACCCTGACTCCTTCAGGGTGGTGAAGCTGAAGAGAATTCAGCGCAAATCTCGAATGCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CAA 90 bp | TCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGGCTGGGGCGGATTTTaGATCATTTCCTTTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SHSPNHPQPGWSHGPRSVGWGGF*IISFLE Trigger: TTCAAGAAAGGAAATGATCAAAAATCCGCCCCAGCC...GACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCTGTTTGATCCTTTaGGATCATCCCCACAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CVFSQPKPSSAWLEPRPQVCLIL*DHPHRK Trigger: CTTCCTGTGGGGATGATCCAAAAGGATCAAACAGAC...CTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | TCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCGCTTCTTGTACATTGTaGCTCCCATTTGATTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SQPKPSSAWLEPRPQVRRASCTL*LPFDSL Trigger: AAGAGAATCAAATGGGAGCAACAATGTACAAGAAGC...GCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CCA 90 bp | GGGTCGTTCTGTCTCACTCGTCTCAAGCTCCCGTCCAGGTCTGTCTaGTTCCCTGAGGGCCTCGCACTTACCTTCAGAAAACTGGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: GSFCLTRLKLPSRSV*FPEGLALTFRKLVS Trigger: AGATACCAGTTTTCTGAAGGTAAGTGCGAGGCCCTCAGGGAACCAGACAGACCTGGACGGGAGCTTGAGACGAGTGAGACAGAACGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | CATCCTCAGCCTGGCTGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTTTCTTAGGGTCTAATTaGGCTATTTTCTTCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: HPQPGWSHGPRSVACTVRFLGSN*AIFFSP Trigger: AGGTGAGAAGAAAATAGCCAAATTAGACCCTAAGAA...ACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCAGCCAGGCTGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | ACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCTCTGAGCATTACATCTTTGAGGTaGGTTTTCTCCTGTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAPGPSPALFVKWPPALSITSLR*VFSCAS Trigger: AGAGGCACAGGAGAAAACCAACCTCAAAGATGTAAT...GCTCAGAGCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS TCA 90 bp | GTTTTCTCCTGTGCCTCTCTGGCTTCCGGCATTCGAGATTTGCGCTaGATTCTCTTCAGCTTCACCACCCTGAAGGAGTCAGGGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFSCASLASGIRDLR*ILFSFTTLKESGSV Trigger: GACGGACCCTGACTCCTTCAGGGTGGTGAAGCTGAAGAGAATTCAGCGCAAATCTCGAATGCCGGAAGCCAGAGAGGCACAGGAGAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | CCCTTTTCTCTTGGGCCTGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCAAGTTGGACTCAATATaGAGGGTGGTGACGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PFSLGPVSSHSPNHPQPGKLDSI*RVVTLL Trigger: CAGGAGCGTCACCACCCTCAATATTGAGTCCAACTT...GCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACAGGCCCAAGAGAAAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCACGGCCCCAGGTCCGTCGCCTGCACTGTTCGTGAAATGGCCTCCAGCGTTTTGATTACATCTTaGAGGTTGGTTTTCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WSHGPRSVACTVREMASSVLITS*RLVFSC Trigger: ACAGGAGAAAACCAACCTCAAAGATGTAATCAAAAC...GCTGGAGGCCATTTCACGAACAGTGCAGGCGACGGACCTGGGGCCGTGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | TGTGTCTTCTCACAGCCCAAACCATCCTCAGCCTGGCTGGAGCCACGGCCCCAGACTGGCTTGAGCGTTTaGATTACATCTTTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CVFSQPKPSSAWLEPRPQTGLSV*ITSLRL Trigger: CAACCTCAAAGATGTAATCAAAACGCTCAAGCCAGT...CTGGGGCCGTGGCTCCAGCCAGGCTGAGGATGGTTTGGGCTGTGAGAAGACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS GCA 90 bp | TCCAACATAGCTATCAGCTTTCTCTGCTCTTTAAGTTGCTGCTGCTaGTGTTCCTCCTGTCGTTTCTGCCTCCGTTTATCCTGGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SNIAISFLCSLSCCC*CSSCRFCLRLSWFL Trigger: CAGGAACCAGGATAAACGGAGGCAGAAACGACAGGAGGAACAGCAGCAGCAGCAACTTAAAGAGCAGAGAAAGCTGATAGCTATGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CAA 90 bp | GAGAAGAAGAACGTGTTGTCTGTGAACATGGGTGTTCTGCATCCTTCCCTTTTCTCTCTGCTCTTTAAGTaGCTGCTGCTGCTGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EKKNVLSVNMGVLHPSLFSLLFK*LLLLFL Trigger: GAGGAACAGCAGCAGCAGCAACTTAAAGAGCAGAGA...GAAAAGGGAAGGATGCAGAACACCCATGTTCACAGACAACACGTTCTTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS GCA 90 bp | TGGCTTGAGCGTTTTGATTACATCTTTGAGGTTGGTTTTCTCCTGTaGCTCTCTGGCTTCCGGCATTCGAGATTTGCGCTGAATTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLERFDYIFEVGFLL*LSGFRHSRFALNSL Trigger: AAGAGAATTCAGCGCAAATCTCGAATGCCGGAAGCCAGAGAGGCACAGGAGAAAACCAACCTCAAAGATGTAATCAAAACGCTCAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | GAGAAGAAGAACGTGTTGTCTGTGAACATGGGTGTTCTGCATCCTTCCCTTTTCTCATCAGCACCGACGTaGGCTAAACTGAAGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: EKKNVLSVNMGVLHPSLFSSAPT*AKLKVL Trigger: CAAAACCTTCAGTTTAGCCAACGTCGGTGCTGATGA...GAAAAGGGAAGGATGCAGAACACCCATGTTCACAGACAACACGTTCTTCTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS GCA 90 bp | ATACATGTAATCAACGAGAGACTTATGGTTGAAGTTTCCTGTGGGTaGCTTGTCTGTTTGATCCTTTTGGATCATCCCCACAGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IHVINERLMVEVSCG*LVCLILLDHPHRKV Trigger: CACCTTCCTGTGGGGATGATCCAAAAGGATCAAACAGACAAGGCACCCACAGGAAACTTCAACCATAAGTCTCTCGTTGATTACATGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS-3UTR CAA 90 bp | GTTTACCAAACGAGGTTAGCTTCTGCTTCTAGAAGCACAACGCTACAATTTTCATCAATGTTGTTCAGGTaGAGTTCCTTCATGTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VYQTRLASASRSTTLQFSSMLFR*SSFMSG Trigger: CCCCGACATGAAGGAACTCAACCTGAACAACATTGA...TGAAAATTGTAGCGTTGTGCTTCTAGAAGCAGAAGCTAACCTCGTTTGGTAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CAA 90 bp | GTTTACCAAACGAGGTTAGCTTCTGCTTCTAGAAGCACAACGCTACAATTTTCATCAGTTAGCGTTTCATaGAACTGGAGGCACCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: VYQTRLASASRSTTLQFSSVSVS*NWRHLM Trigger: CATGAGGTGCCTCCAGTTCAATGAAACGCTAACTGA...TGAAAATTGTAGCGTTGTGCTTCTAGAAGCAGAAGCTAACCTCGTTTGGTAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS-3UTR CAA 90 bp | CAAACGAGGTTAGCTTCTGCTTCTAGAAGCACAACGCTACAATTTTCAGGCAAGTTCTCACCTTTTTCTTaGGTCTCTGATGTGTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QTRLASASRSTTLQFSGKFSPFS*VSDVSF Trigger: AAAAGACACATCAGAGACCAAAGAAAAAGGTGAGAA...CTTGCCTGAAAATTGTAGCGTTGTGCTTCTAGAAGCAGAAGCTAACCTCGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS GCA 72 bp | TCGAGGGGCCGCCCAGATGCAGGCTGGAAGAACTCCTaGATTCTGGGGTCGGGCATGGGTCCTCCCAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRGRPDAGWKNS*ILGSGMGPPNL Trigger: GAGGTTGGGAGGACCCATGCCCGACCCCAGAATGCAGGAGTTCTTCCAGCCTGCATCTGGGCGGCCCCTCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CCA 72 bp | CAGGCTGGAAGAACTCCTGCATTCTGGGGTCGGGCATaGGTCCTCCCAACCTCTCCCACATCCCAGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QAGRTPAFWGRA*VLPTSPTSQGA Trigger: TGCCCCCTGGGATGTGGGAGAGGTTGGGAGGACCCATGCCCGACCCCAGAATGCAGGAGTTCTTCCAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CCA 72 bp | GCCGCCCAGATGCAGGCTGGAAGAACTCCTGCATTCTaGGGTCGGGCATGGGTCCTCCCAACCTCTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: AAQMQAGRTPAF*GRAWVLPTSPT Trigger: TGTGGGAGAGGTTGGGAGGACCCATGCCCGACCCCAGAATGCAGGAGTTCTTCCAGCCTGCATCTGGGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS TCA 72 bp | TGTGTCGGATGTCATTCAAGAGCTGGTCTCTGGGAGTaGTTTCCACCAGCGGGGGCGGCCTATTTCTCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CVGCHSRAGLWE*FPPAGAAYFSA Trigger: TGCCGAGAAATAGGCCGCCCCCGCTGGTGGAAATCACTCCCAGAGACCAGCTCTTGAATGACATCCGACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS TCA 72 bp | TCGTCTCAAGCTCCCGTCCAGGTCTGTCTGGTTCCCTaGGGGCCTCGCACTTACCTTCAGAAAACTGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: SSQAPVQVCLVP*GPRTYLQKTGI Trigger: GATACCAGTTTTCTGAAGGTAAGTGCGAGGCCCTCAGGGAACCAGACAGACCTGGACGGGAGCTTGAGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CCA 72 bp | TGTCTCACTCGTCTCAAGCTCCCGTCCAGGTCTGTCTaGTTCCCTGAGGGCCTCGCACTTACCTTCAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: CLTRLKLPSRSV*FPEGLALTFRK Trigger: TTTTCTGAAGGTAAGTGCGAGGCCCTCAGGGAACCAGACAGACCTGGACGGGAGCTTGAGACGAGTGAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS TCA 72 bp | TTGATCATTTCCTTTCTTGAACCAAAGGGGACTTCCTaGGCATCGAGGGGCCGCCCAGATGCAGGCTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LIISFLEPKGTS*ASRGRPDAGWK Trigger: CTTCCAGCCTGCATCTGGGCGGCCCCTCGATGCTCAGGAAGTCCCCTTTGGTTCAAGAAAGGAAATGATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS TCA 72 bp | GAGATTTGCGCTGAATTCTCTTCAGCTTCACCACCCTaGAGGAGTCAGGGTCCGTCTTGCACTGTGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: EICAEFSSASPP*RSQGPSCTVEA Trigger: AGCCTCCACAGTGCAAGACGGACCCTGACTCCTTCAGGGTGGTGAAGCTGAAGAGAATTCAGCGCAAATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 72 bp | TTCAGCTTCACCACCCTGAAGGAGTCAGGGTCCGTCTaGCACTGTGGAGGCTGGGGCGGATTTTTGATCATT | + |
|
Preference number: 6 (lower is better) Translates to: FSFTTLKESGSV*HCGGWGGFLII Trigger: AATGATCAAAAATCCGCCCCAGCCTCCACAGTGCAAGACGGACCCTGACTCCTTCAGGGTGGTGAAGCTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS TCA 72 bp | TGTGCCTCTCTGGCTTCCGGCATTCGAGATTTGCGCTaGATTCTCTTCAGCTTCACCACCCTGAAGGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CASLASGIRDLR*ILFSFTTLKES Trigger: TGACTCCTTCAGGGTGGTGAAGCTGAAGAGAATTCAGCGCAAATCTCGAATGCCGGAAGCCAGAGAGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CCA 72 bp | GATTTCCACCAGCGGGGGCGGCCTATTTCTCGGCACTaGCTTGAGCGTTTTGATTACATCTTTGAGGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DFHQRGRPISRH*LERFDYIFEVG Trigger: ACCAACCTCAAAGATGTAATCAAAACGCTCAAGCCAGTGCCGAGAAATAGGCCGCCCCCGCTGGTGGAAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CAA 72 bp | ACGATGCCCTTCCCAGTGATGAAGTTGGACTCAATATaGAGGGTGGTGACGCTCCTGTTTTCCCGCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: TMPFPVMKLDSI*RVVTLLFSRSM Trigger: CATGCTGCGGGAAAACAGGAGCGTCACCACCCTCAATATTGAGTCCAACTTCATCACTGGGAAGGGCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CAA 72 bp | GGGGGCGGCCTATTTCTCGGCACTGGCTTGAGCGTTTaGATTACATCTTTGAGGTTGGTTTTCTCCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GGGLFLGTGLSV*ITSLRLVFSCA Trigger: GGCACAGGAGAAAACCAACCTCAAAGATGTAATCAAAACGCTCAAGCCAGTGCCGAGAAATAGGCCGCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS TCA 72 bp | TTATGGTTGAAGTTTCCTGTGGGTGCCTTGTCTGTTTaGTCCTTTTGGATCATCCCCACAGGAAGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LWLKFPVGALSV*SFWIIPTGRWG Trigger: CCCCCACCTTCCTGTGGGGATGATCCAAAAGGATCAAACAGACAAGGCACCCACAGGAAACTTCAACCATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CCA 72 bp | CCATCTTCAACAGAGTGGTGTTGGCCTTCAGAAGCCTaGATATTTCCATCTCGGCGTGGTGACCTAGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: PSSTEWCWPSEA*IFPSRRGDLAY Trigger: ATATGCTAGGTCACCACGCCGAGATGGAAATATCCAGGCTTCTGAAGGCCAACACCACTCTGTTGAAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CCA 72 bp | TGCTGTTCCTCCTGTCGTTTCTGCCTCCGTTTATCCTaGTTCCTGGTAAGCAGATTCGTTACCACCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCSSCRFCLRLS*FLVSRFVTTIL Trigger: CAGAATGGTGGTAACGAATCTGCTTACCAGGAACCAGGATAAACGGAGGCAGAAACGACAGGAGGAACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 72 bp | CTTATGGTTGAAGTTTCCTGTGGGTGCCTTGTCTGTTaGATCCTTTTGGATCATCCCCACAGGAAGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LMVEVSCGCLVC*ILLDHPHRKVG Trigger: CCCCACCTTCCTGTGGGGATGATCCAAAAGGATCAAACAGACAAGGCACCCACAGGAAACTTCAACCATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS GCA 72 bp | CGTTTTGATTACATCTTTGAGGTTGGTTTTCTCCTGTaGCTCTCTGGCTTCCGGCATTCGAGATTTGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RFDYIFEVGFLL*LSGFRHSRFAL Trigger: CAGCGCAAATCTCGAATGCCGGAAGCCAGAGAGGCACAGGAGAAAACCAACCTCAAAGATGTAATCAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 72 bp | GCCAGGGCAAACGCTACGCTCTCATCAGCACCGACGTaGGCTAAACTGAAGGTTTTGATGTGTTTGTTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: ARANATLSSAPT*AKLKVLMCLFF Trigger: GAAAAACAAACACATCAAAACCTTCAGTTTAGCCAACGTCGGTGCTGATGAGAGCGTAGCGTTTGCCCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 90 bp | CTATTTCTCGGCACTGGCTTGAGCGTTTTGATTACATCTTTGAGGTaGGTTTTCTCCTGTGCCTCTCTGGCTTCCGGCATTCGAGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LFLGTGLSVLITSLR*VFSCASLASGIRDL Trigger: CAAATCTCGAATGCCGGAAGCCAGAGAGGCACAGGAGAAAACCAACCTCAAAGATGTAATCAAAACGCTCAAGCCAGTGCCGAGAAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 90 bp | AACGCTACGCTCTCATCAGCACCGACGTTGGCTAAACTGAAGGTTTaGATGTGTTTGTTTTTCTTCATGGCATTGACGAAGTCCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: NATLSSAPTLAKLKV*MCLFFFMALTKSSN Trigger: GTTGCTGGACTTCGTCAATGCCATGAAGAAAAACAAACACATCAAAACCTTCAGTTTAGCCAACGTCGGTGCTGATGAGAGCGTAGCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS GCA 72 bp | ATCAACGAGAGACTTATGGTTGAAGTTTCCTGTGGGTaGCTTGTCTGTTTGATCCTTTTGGATCATCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: INERLMVEVSCG*LVCLILLDHPH Trigger: GTGGGGATGATCCAAAAGGATCAAACAGACAAGGCACCCACAGGAAACTTCAACCATAAGTCTCTCGTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 90 bp | AAGTCCAGCAACATTTCTTTAGGGATATTTTCAATGTTGTTCAGGTaGAGTTCCTTCATGTCGGGGTCGTTCTGTCTCACTCGTCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSSNISLGIFSMLFR*SSFMSGSFCLTRLK Trigger: CTTGAGACGAGTGAGACAGAACGACCCCGACATGAAGGAACTCAACCTGAACAACATTGAAAATATCCCTAAAGAAATGTTGCTGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 90 bp | GCATTGACGAAGTCCAGCAACATTTCTTTAGGGATATTTTCAATGTaGTTCAGGTTGAGTTCCTTCATGTCGGGGTCGTTCTGTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ALTKSSNISLGIFSM*FRLSSFMSGSFCLT Trigger: AGTGAGACAGAACGACCCCGACATGAAGGAACTCAACCTGAACAACATTGAAAATATCCCTAAAGAAATGTTGCTGGACTTCGTCAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
||
| CDS CAA 72 bp | AAGTCCAGCAACATTTCTTTAGGGATATTTTCAATGTaGTTCAGGTTGAGTTCCTTCATGTCGGGGTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KSSNISLGIFSM*FRLSSFMSGSF Trigger: GAACGACCCCGACATGAAGGAACTCAACCTGAACAACATTGAAAATATCCCTAAAGAAATGTTGCTGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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| CDS CAA 90 bp | CTCTCATCAGCACCGACGTTGGCTAAACTGAAGGTTTTGATGTGTTaGTTTTTCTTCATGGCATTGACGAAGTCCAGCAACATTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LSSAPTLAKLKVLMC*FFFMALTKSSNISL Trigger: TAAAGAAATGTTGCTGGACTTCGTCAATGCCATGAAGAAAAACAAACACATCAAAACCTTCAGTTTAGCCAACGTCGGTGCTGATGAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095655.4 |
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