Pregenerated sensors for LMOD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029683Ensembl transcript IDs: ENSMUST00000031694.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCCTCTTCTACAGCTGCAGGGCTCTCATaGTGGCCAGGATCCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: AHNAPRITPLNSSRSSSTAAGLS*WPGSPC Trigger: GCAAGGGGATCCTGGCCATCATGAGAGCCCTGCAGC...TGTAGAAGAGGACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | CATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGCGGCGTCATCAGCGTaGGTGTTGGCCAGGCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: HFGNSSQCTSDYTTKQFQAASSA*VLARLN Trigger: GTTCAGCCTGGCCAACACGCACGCTGATGACGCCGC...CTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | CATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGATGTGCCGCTGGTTGTaGAAGCGCAGCTCCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HFGNSSQCTSDYTTKQFQMCRWL*KRSSVS Trigger: GCTCACGGAGCTGCGCTTCCACAACCAGCGGCACAT...CTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | AGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCGCGTGTTGGCCAGGCTaGACGTCTTCACCACTGTGT | + |
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Preference number: 4 (lower is better) Translates to: RHFGNSSQCTSDYTTKQFACWPG*TSSPLC Trigger: ACACAGTGGTGAAGACGTTCAGCCTGGCCAACACGC...GAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | GAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGGGAAGCGCAGCTCCGTaGGCACCGTGTTGTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: EIFQIKEGILGTAHNAPRGSAAP*APCCAA Trigger: TGCAGCACAACACGGTGCTCACGGAGCTGCGCTTCC...CCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | GAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGCGGGGCCACAGGAGATaGAGGTCTGCTCCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: EIFQIKEGILGTAHNAPRRGHRR*RSAPPS Trigger: ACTGGGAGGAGCAGACCTCCATCTCCTGTGGCCCCG...CCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | GCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCCTCTTCTACACTGCTCCTCCCAGTGTaGACTTTCTTGGAGACTTTG | + |
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Preference number: 4 (lower is better) Translates to: AHNAPRITPLNSSRSSSTLLLPV*TFLETL Trigger: CAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAG...TGTAGAAGAGGACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | GAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGAGCACCGTGTTGTGCTaGAGGGCTCTCATGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: EIFQIKEGILGTAHNAPRSTVLC*RALMMA Trigger: GGCCATCATGAGAGCCCTGCAGCACAACACGGTGCT...CCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | TATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTAGGAGACTTTGGGAGATaGCCAGGGAGACTGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: YSKLKKAFWEQLTMHLGLGDFGR*PGRLSR Trigger: CCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCC...TAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | CAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCATCTCGGAGATGCATATaGAGAAGAGCCAGGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: QIKEGILGTAHNAPRITPSRRCI*RRARCP Trigger: GGGACACCTGGCTCTTCTCCATATGCATCTCCGAGA...TGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | GCTCATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAACTTTTTCTCTGGGAGTaGAGGAGCAGGGGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AHCILEFPLEFQSDTIFELFLWE*RSRGRR Trigger: CCTCCTCCCCCTGCTCCTCCACTCCCAGAGAAAAAG...TTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | CATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGTTTTGTAGGGCGCGCTaGGCACTTTCCTGTTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: HFGNSSQCTSDYTTKQFQFCRAR*ALSCCL Trigger: TAAACAACAGGAAAGTGCCCAGCGCGCCCTACAAAA...CTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTGGGAAATATTCCAAATGGATTTCCACAAGGGTaGATGGCGGCTGGTGACTCG | + |
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Preference number: 4 (lower is better) Translates to: SLWNSRVTLSLKLGNIPNGFPQG*MAAGDS Trigger: CGAGTCACCAGCCGCCATTCACCCTTGTGGAAATCC...ATTTGGAATATTTCCCAACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | GCTCATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTGAGCACCGTGTTGTaGTGCAGGGCTCTCATGATG | + |
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Preference number: 4 (lower is better) Translates to: AHCILEFPLEFQSDTIFEVSTVL*CRALMM Trigger: CATCATGAGAGCCCTGCAGCACAACACGGTGCTCAC...TTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | GCTCATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAACCACTGTGTTCTCCTTaGGAGCTTCAGCAAATCGGG | + |
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Preference number: 4 (lower is better) Translates to: AHCILEFPLEFQSDTIFEPLCSP*ELQQIG Trigger: CCCGATTTGCTGAAGCTCTCAAGGAGAACACAGTGG...TTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | TCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTGGGAAATATTCCAAATATTTCCATCTCCACCTaGGAGCCCATGATGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SLWNSRVTLSLKLGNIPNISIST*EPMMCR Trigger: GCGGCACATCATGGGCTCTCAGGTGGAGATGGAAAT...ATTTGGAATATTTCCCAACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | TTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCTCCTGCATGCGTTTTTaGCTCTGTTTATCCATATTC | + |
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Preference number: 4 (lower is better) Translates to: FGNSSQCTSDYTTKQFQVSCMRF*LCLSIF Trigger: GAATATGGATAAACAGAGGCAAAAACGCATGCAGGA...GACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | TATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTACCATCGTGCCCCTCTTaGTGTTTTTGCTCCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: YSKLKKAFWEQLTMHLGLPSCPS*CFCSCM Trigger: CATGCAGGAGCAAAAACAGCAAGAGGGGCACGATGG...TAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | GAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGCCAGGTGTCCCTCTTTaGCAGACTTTGGTCCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: EIFQIKEGILGTAHNAPRPGVPL*QTLVLR Trigger: TCTTAGGACCAAAGTCTGGCAAAGAGGGACACCTGG...CCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | CATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTTTCCACAAGGGTGAATaGCGGCTGGTGACTCGGAGT | + |
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Preference number: 4 (lower is better) Translates to: HCILEFPLEFQSDTIFEVFHKGE*RLVTRS Trigger: ACTCCGAGTCACCAGCCGCCATTCACCCTTGTGGAA...AACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | GAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGCTTTCTTGGAGACTTTaGGAGATGACCAGGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: EIFQIKEGILGTAHNAPRLSWRL*EMTRET Trigger: AGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAG...CCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | ATCTTTGAAGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCGATGAGCTTTTTCTCTaGGAGTGGAGGAGCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: IFEVGKYSKLKKAFWEQLDELFL*EWRSRG Trigger: CCCCCTGCTCCTCCACTCCCAGAGAAAAAGCTCATC...GAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACTTCAAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | GAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGCGCTGTTGCTCTCTGTaGAAATTAGTTCCTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: EIFQIKEGILGTAHNAPRRCCSL*KLVPLH Trigger: GTGAAGAGGAACTAATTTTCACAGAGAGCAACAGCG...CCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | AGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCAAGACTGTCTCGGAGATaGATATGGAGAAGAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SWEIFQIKEGILGTAHNARLSRR*IWRRAR Trigger: CCTGGCTCTTCTCCATATGCATCTCCGAGACAGTCT...TGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | AGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCCTCTTCTACTTGTTTAATGACTTCTaGAATGTTTCTGGTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SSQCTSDYTTKQFQVLFYLFNDF*NVSGDE Trigger: CTCATCACCAGAAACATTGCAGAAGTCATTAAACAA...GTAGAAGAGGACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | TTTGAAGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACATCTGTCAGACTCTTTTaGCTTAGCCCCACAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: FEVGKYSKLKKAFWEQLTSVRLF*LSPTGR Trigger: CCTTCCTGTGGGGCTAAGGCAAAAGAGTCTGACAGA...TGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACAGTGTGGACTTTCTTaGAGACTTTGGGAGATGACC | + |
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Preference number: 4 (lower is better) Translates to: SWEIFQIKEGILGTAHNAQCGLS*RLWEMT Trigger: GGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTG...TGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | TCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTGGGAAATATTCCAAATTGCTGTTTTTGCTCCTaGATGCGTTTTTGCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SLWNSRVTLSLKLGNIPNCCFCS*MRFCLC Trigger: ACAGAGGCAAAAACGCATGCAGGAGCAAAAACAGCA...ATTTGGAATATTTCCCAACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | AGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCAGCTGAAGTTTCCTGTTaGGGTTTTCTCTGTCAGACT | + |
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Preference number: 4 (lower is better) Translates to: SWEIFQIKEGILGTAHNAAEVSC*GFLCQT Trigger: AGTCTGACAGAGAAAACCCCAACAGGAAACTTCAGC...TGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | TATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTAAATCGGGATAAGGTCTaGGTGGTGATGTTCTCTATA | + |
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Preference number: 4 (lower is better) Translates to: YSKLKKAFWEQLTMHLGLNRDKV*VVMFSI Trigger: TATAGAGAACATCACCACCCAGACCTTATCCCGATT...TAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | ATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTATAAGGTCTGGGTGGTaGTGTTCTCTATATTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: IFQIKEGILGTAHNAPRIIRSGW*CSLYCS Trigger: TGAACAATATAGAGAACATCACCACCCAGACCTTAT...AATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | CAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCAGTGTTCTTCCACTGTTaGCGTTGGTTAAATTTATAT | + |
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Preference number: 4 (lower is better) Translates to: QIKEGILGTAHNAPRITPVFFHC*RWLNLY Trigger: ATATAAATTTAACCAACGGCAACAGTGGAAGAACAC...TGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR GCA 90 bp | GCTCATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTTTTGCTCCTGCATaGGTTTTTGCCTCTGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: AHCILEFPLEFQSDTIFEVFAPA*VFASVY Trigger: ATAAACAGAGGCAAAAACGCATGCAGGAGCAAAAAC...TTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACACGTCATACTCATTCTTaGTCCTGGGAGCTCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: FEVGKYSKLKKAFWEQLTRHTHS*SWELKM Trigger: CATTTTGAGCTCCCAGGACCAAGAATGAGTATGACG...TGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR TCA 90 bp | CATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTTTTCTTCTCTTGCACTaGCCTCAGAGAATTCTTAAT | + |
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Preference number: 4 (lower is better) Translates to: HCILEFPLEFQSDTIFEVFLLLH*PQRILN Trigger: ATTAAGAATTCTCTGAGGTCAGTGCAAGAGAAGAAA...AACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CCA 90 bp | GGTGGAGGCGGGGCCACAGGAGATGGAGGTCTGCTCCTCCCAGTGTaGACTTTCTTGGAGACTTTGGGAGATGACCAGGGAGACTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: GGGGATGDGGLLLPV*TFLETLGDDQGDCL Trigger: GAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTCCTGTGGCCCCGCCTCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CCA 90 bp | GGGCCACAGGAGATGGAGGTCTGCTCCTCCCAGTGTGGACTTTCTTaGAGACTTTGGGAGATGACCAGGGAGACTGTCTCGGAGATGCAT | + |
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Preference number: 5 (lower is better) Translates to: GPQEMEVCSSQCGLS*RLWEMTRETVSEMH Trigger: ATGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTCCTGTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 90 bp | GACTGTCTCGGAGATGCATATGGAGAAGAGCCAGGTGTCCCTCTTTaGCAGACTTTGGTCCTAAGAGCAGCTCCTCCATCGTGCCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: DCLGDAYGEEPGVPL*QTLVLRAAPPSCPS Trigger: AGAGGGGCACGATGGAGGAGCTGCTCTTAGGACCAAAGTCTGGCAAAGAGGGACACCTGGCTCTTCTCCATATGCATCTCCGAGACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS TCA 90 bp | AGGTCTGCTCCTCCCAGTGTGGACTTTCTTGGAGACTTTGGGAGATaGCCAGGGAGACTGTCTCGGAGATGCATATGGAGAAGAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RSAPPSVDFLGDFGR*PGRLSRRCIWRRAR Trigger: CCTGGCTCTTCTCCATATGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 90 bp | GTCCCTCTTTGCCAGACTTTGGTCCTAAGAGCAGCTCCTCCATCGTaGCCCTCTTGCTGTTTTTGCTCCTGCATGCGTTTTTGCCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: VPLCQTLVLRAAPPS*PSCCFCSCMRFCLC Trigger: ACAGAGGCAAAAACGCATGCAGGAGCAAAAACAGCAAGAGGGGCACGATGGAGGAGCTGCTCTTAGGACCAAAGTCTGGCAAAGAGGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CCA 90 bp | GAGATGGAGGTCTGCTCCTCCCAGTGTGGACTTTCTTGGAGACTTTaGGAGATGACCAGGGAGACTGTCTCGGAGATGCATATGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: EMEVCSSQCGLSWRL*EMTRETVSEMHMEK Trigger: CTTCTCCATATGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | CATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGATGATGTGCCGCTGGTaGTGGAAGCGCAGCTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: HFGNSSQCTSDYTTKQFQMMCRW*WKRSSV Trigger: CACGGAGCTGCGCTTCCACAACCAGCGGCACATCAT...CTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | TTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCGCCAGGTGTCCCTCTTaGCCAGACTTTGGTCCTAAG | + |
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Preference number: 5 (lower is better) Translates to: FGNSSQCTSDYTTKQFQVARCPS*PDFGPK Trigger: CTTAGGACCAAAGTCTGGCAAAGAGGGACACCTGGC...GACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | AGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCCTCTTCTACATGTGCTCGTTAACCTaGAGCATGTCTGCAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: SSQCTSDYTTKQFQVLFYMCSLT*SMSAMA Trigger: TGCCATTGCAGACATGCTCAAGGTTAACGAGCACAT...GTAGAAGAGGACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS TCA 90 bp | TTCAATGTCTTCCAGCTCCCTCTCAAGCTCCTTCAGCTCTTCAGGTaGGAGGGAGGCCAGAAGTTCATCCTCATCAATGGATTCATATTT | + |
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Preference number: 5 (lower is better) Translates to: FNVFQLPLKLLQLFR*EGGQKFILINGFIF Trigger: AAATATGAATCCATTGATGAGGATGAACTTCTGGCCTCCCTCTCACCTGAAGAGCTGAAGGAGCTTGAGAGGGAGCTGGAAGACATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | TTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCAGCGTGGTATTCTCTTaGAGCAGCTTGACAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FGNSSQCTSDYTTKQFQVSVVFS*SSLTIS Trigger: GGAAATTGTCAAGCTGCTCAAAGAGAATACCACGCT...GACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | AGCTCACAATGCACCTCGGATTACACCACTAAACAGTTCCAGGTCCTCTTCTACTCGTCATACTCATTCTaGGTCCTGGGAGCTCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SSQCTSDYTTKQFQVLFYSSYSF*VLGAQN Trigger: ATTTTGAGCTCCCAGGACCAAGAATGAGTATGACGA...GTAGAAGAGGACCTGGAACTGTTTAGTGGTGTAATCCGAGGTGCATTGTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | CATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTTCATCAGCGTGCGTGTaGGCCAGGCTGAACGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HCILEFPLEFQSDTIFEVSSACV*ARLNVF Trigger: GAAGACGTTCAGCCTGGCCAACACGCACGCTGATGA...AACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | TTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCTCTTTGCCAGACTTaGGTCCTAAGAGCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FQIKEGILGTAHNAPRITPLCQT*VLRAAP Trigger: AGGAGCTGCTCTTAGGACCAAAGTCTGGCAAAGAGG...TGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS TCA 90 bp | CATCTTCTGTACACACCTCCTCAGAGACTTCGCTGTTGCTCTCTGTaGAAATTAGTTCCTCTTCACTCTCTTCCTTGTCTTCTTCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: HLLYTPPQRLRCCSL*KLVPLHSLPCLLLQ Trigger: TTGCAGAAGAAGACAAGGAAGAGAGTGAAGAGGAACTAATTTTCACAGAGAGCAACAGCGAAGTCTCTGAGGAGGTGTGTACAGAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | TATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTATCCATCGTGCCCCTCTaGCTGTTTTTGCTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YSKLKKAFWEQLTMHLGLSIVPL*LFLLLH Trigger: ATGCAGGAGCAAAAACAGCAAGAGGGGCACGATGGA...TAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | GCTCATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAACCACTGTGTTCTCCTaGAGAGCTTCAGCAAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHCILEFPLEFQSDTIFETTVFS*RASANR Trigger: CCGATTTGCTGAAGCTCTCAAGGAGAACACAGTGGT...TTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | CAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCTCGGATTACACCACTCCTGCATGCGTTTTaGCCTCTGTTTATCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: QIKEGILGTAHNAPRITPLLHAF*PLFIHI Trigger: AATATGGATAAACAGAGGCAAAAACGCATGCAGGAG...TGGTGTAATCCGAGGTGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAATGCACCAGTGTGGACTTTCTaGGAGACTTTGGGAGATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SWEIFQIKEGILGTAHNAPVWTF*ETLGDD Trigger: GTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGG...TGCATTGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | TCCCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTGGGAAATATTCCAAATGTTTTGTGGCTTCTGTaGTCTCTTCCTCTTCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLWNSRVTLSLKLGNIPNVLWLL*SLPLPH Trigger: GTGAGGAAGAGGAAGAGACAACAGAAGCCACAAAAC...ATTTGGAATATTTCCCAACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | GCTCATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAATCTTCACTCTCTTCCTaGTCTTCTTCTGCAACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AHCILEFPLEFQSDTIFESSLSS*SSSATF Trigger: AAAGGTTGCAGAAGAAGACAAGGAAGAGAGTGAAGA...TTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | GCTCATTGCATCTTAGAATTCCCTTTGGAATTCCAGAGTGACACTATCTTTGAATGTGTTCTTCCACTGTaGCCGTTGGTTAAATTTATA | + |
|
Preference number: 5 (lower is better) Translates to: AHCILEFPLEFQSDTIFECVLPL*PLVKFI Trigger: TATAAATTTAACCAACGGCAACAGTGGAAGAACACA...TTCAAAGATAGTGTCACTCTGGAATTCCAAAGGGAATTCTAAGATGCAATGAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | CCTTTGGAATTCCAGAGTGACACTATCTTTGAAGTTGGGAAATATTCCAAATTACTGGGCACTTTCCTGTaGTTTAATGACTTCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLEFQSDTIFEVGKYSKLLGTFL*FNDFCN Trigger: ATTGCAGAAGTCATTAAACAACAGGAAAGTGCCCAG...TAATTTGGAATATTTCCCAACTTCAAAGATAGTGTCACTCTGGAATTCCAAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS-3UTR CAA 90 bp | TTTGAAGTTGGGAAATATTCCAAATTAAAGAAGGCATTTTGGGAACAGCTCACAGTCGTATCAGGGTCATaGTTTCTAATCTTTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FEVGKYSKLKKAFWEQLTVVSGS*FLIFSR Trigger: TCTGGAAAAGATTAGAAACAATGACCCTGATACGAC...TGTGAGCTGTTCCCAAAATGCCTTCTTTAATTTGGAATATTTCCCAACTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 72 bp | GCAATGGCAATCGCCGCGGCGTCATCAGCGTGCGTGTaGGCCAGGCTGAACGTCTTCACCACTGTGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AMAIAAASSACV*ARLNVFTTVFS Trigger: GGAGAACACAGTGGTGAAGACGTTCAGCCTGGCCAACACGCACGCTGATGACGCCGCGGCGATTGCCATTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 72 bp | ATGTCTGCAATGGCAATCGCCGCGGCGTCATCAGCGTaGGTGTTGGCCAGGCTGAACGTCTTCACCACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MSAMAIAAASSA*VLARLNVFTTV Trigger: CACAGTGGTGAAGACGTTCAGCCTGGCCAACACGCACGCTGATGACGCCGCGGCGATTGCCATTGCAGACAT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | AGCATGTCTGCAATGGCAATCGCCGCGGCGTCATCAGCGTGCGTGTaGGCCAGGCTGAACGTCTTCACCACTGTGTTCTCCTTGAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SMSAMAIAAASSACV*ARLNVFTTVFSLRA Trigger: AGCTCTCAAGGAGAACACAGTGGTGAAGACGTTCAGCCTGGCCAACACGCACGCTGATGACGCCGCGGCGATTGCCATTGCAGACATGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | GGGGCCACAGGAGATGGAGGTCTGCTCCTCCCAGTGTGGACTTTCTaGGAGACTTTGGGAGATGACCAGGGAGACTGTCTCGGAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: GATGDGGLLLPVWTF*ETLGDDQGDCLGDA Trigger: TGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTCCTGTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CCA 72 bp | GGGGCCACAGGAGATGGAGGTCTGCTCCTCCCAGTGTaGACTTTCTTGGAGACTTTGGGAGATGACCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GATGDGGLLLPV*TFLETLGDDQG Trigger: TCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTCCTGTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 72 bp | TACGCTGGTAATGTGCTCGTTAACCTTGAGCATGTCTaGAATGGCAATCGCCGCGGCGTCATCAGCGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: YAGNVLVNLEHV*NGNRRGVISVR Trigger: ACGCACGCTGATGACGCCGCGGCGATTGCCATTGCAGACATGCTCAAGGTTAACGAGCACATTACCAGCGTA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CCA 72 bp | GAGATGGAGGTCTGCTCCTCCCAGTGTGGACTTTCTTaGAGACTTTGGGAGATGACCAGGGAGACTGTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: EMEVCSSQCGLS*RLWEMTRETVS Trigger: CGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 72 bp | TATGGAGAAGAGCCAGGTGTCCCTCTTTGCCAGACTTaGGTCCTAAGAGCAGCTCCTCCATCGTGCCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YGEEPGVPLCQT*VLRAAPPSCPS Trigger: AGAGGGGCACGATGGAGGAGCTGCTCTTAGGACCAAAGTCTGGCAAAGAGGGACACCTGGCTCTTCTCCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 72 bp | GGTCTGCTCCTCCCAGTGTGGACTTTCTTGGAGACTTaGGGAGATGACCAGGGAGACTGTCTCGGAGATGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLLLPVWTFLET*GDDQGDCLGDA Trigger: TGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 72 bp | GGAGATGGAGGTCTGCTCCTCCCAGTGTGGACTTTCTaGGAGACTTTGGGAGATGACCAGGGAGACTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GDGGLLLPVWTF*ETLGDDQGDCL Trigger: GAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS TCA 72 bp | AACAGTGGGATTTCCACAAGGGTGAATGGCGGCTGGTaGCTCGGAGTTCCTCTGTGTTCTTCCACTGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NSGISTRVNGGW*LGVPLCSSTVA Trigger: GGCAACAGTGGAAGAACACAGAGGAACTCCGAGTCACCAGCCGCCATTCACCCTTGTGGAAATCCCACTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 72 bp | GGAGATGCATATGGAGAAGAGCCAGGTGTCCCTCTTTaGCAGACTTTGGTCCTAAGAGCAGCTCCTCCATCG | + |
|
Preference number: 6 (lower is better) Translates to: GDAYGEEPGVPL*QTLVLRAAPPS Trigger: CGATGGAGGAGCTGCTCTTAGGACCAAAGTCTGGCAAAGAGGGACACCTGGCTCTTCTCCATATGCATCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CCA 72 bp | GTCTGCTCCTCCCAGTGTGGACTTTCTTGGAGACTTTaGGAGATGACCAGGGAGACTGTCTCGGAGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VCSSQCGLSWRL*EMTRETVSEMH Trigger: ATGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 72 bp | GACTCCACGTTTACGCTGGTAATGTGCTCGTTAACCTaGAGCATGTCTGCAATGGCAATCGCCGCGGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: DSTFTLVMCSLT*SMSAMAIAAAS Trigger: TGACGCCGCGGCGATTGCCATTGCAGACATGCTCAAGGTTAACGAGCACATTACCAGCGTAAACGTGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | ATGAAGTTGGACTCCACGTTTACGCTGGTAATGTGCTCGTTAACCTaGAGCATGTCTGCAATGGCAATCGCCGCGGCGTCATCAGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MKLDSTFTLVMCSLT*SMSAMAIAAASSAC Trigger: GCACGCTGATGACGCCGCGGCGATTGCCATTGCAGACATGCTCAAGGTTAACGAGCACATTACCAGCGTAAACGTGGAGTCCAACTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | GGAGATGCATATGGAGAAGAGCCAGGTGTCCCTCTTTGCCAGACTTaGGTCCTAAGAGCAGCTCCTCCATCGTGCCCCTCTTGCTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GDAYGEEPGVPLCQT*VLRAAPPSCPSCCF Trigger: AAAACAGCAAGAGGGGCACGATGGAGGAGCTGCTCTTAGGACCAAAGTCTGGCAAAGAGGGACACCTGGCTCTTCTCCATATGCATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | GGAGATGGAGGTCTGCTCCTCCCAGTGTGGACTTTCTTGGAGACTTaGGGAGATGACCAGGGAGACTGTCTCGGAGATGCATATGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GDGGLLLPVWTFLET*GDDQGDCLGDAYGE Trigger: TTCTCCATATGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGGAGCAGACCTCCATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS TCA 72 bp | TTCCAGCTCCCTCTCAAGCTCCTTCAGCTCTTCAGGTaGGAGGGAGGCCAGAAGTTCATCCTCATCAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: FQLPLKLLQLFR*EGGQKFILING Trigger: TCCATTGATGAGGATGAACTTCTGGCCTCCCTCTCACCTGAAGAGCTGAAGGAGCTTGAGAGGGAGCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS TCA 72 bp | CCTCCCAGTGTGGACTTTCTTGGAGACTTTGGGAGATaGCCAGGGAGACTGTCTCGGAGATGCATATGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PPSVDFLGDFGR*PGRLSRRCIWR Trigger: TCTCCATATGCATCTCCGAGACAGTCTCCCTGGTCATCTCCCAAAGTCTCCAAGAAAGTCCACACTGGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 72 bp | TGCCAGACTTTGGTCCTAAGAGCAGCTCCTCCATCGTaGCCCTCTTGCTGTTTTTGCTCCTGCATGCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CQTLVLRAAPPS*PSCCFCSCMRF Trigger: AAAACGCATGCAGGAGCAAAAACAGCAAGAGGGGCACGATGGAGGAGCTGCTCTTAGGACCAAAGTCTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 72 bp | GGCGCGCTGGGCACTTTCCTGTTGTTTAATGACTTCTaGAATGTTTCTGGTGATGAGCTTTTTCTCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GALGTFLLFNDF*NVSGDELFLWE Trigger: CTCCCAGAGAAAAAGCTCATCACCAGAAACATTGCAGAAGTCATTAAACAACAGGAAAGTGCCCAGCGCGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | TCGCTGTTGCTCTCTGTGAAAATTAGTTCCTCTTCACTCTCTTCCTaGTCTTCTTCTGCAACCTTTCCACATTCCCCCAGCCGTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLLSVKISSSSLSS*SSSATFPHSPSRSF Trigger: GAAGGAACGGCTGGGGGAATGTGGAAAGGTTGCAGAAGAAGACAAGGAAGAGAGTGAAGAGGAACTAATTTTCACAGAGAGCAACAGCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | GACTCTTCCTCATCTTCTGTACACACCTCCTCAGAGACTTCGCTGTaGCTCTCTGTGAAAATTAGTTCCTCTTCACTCTCTTCCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSSSSSVHTSSETSL*LSVKISSSSLSSLS Trigger: AGACAAGGAAGAGAGTGAAGAGGAACTAATTTTCACAGAGAGCAACAGCGAAGTCTCTGAGGAGGTGTGTACAGAAGATGAGGAAGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS TCA 72 bp | TACACACCTCCTCAGAGACTTCGCTGTTGCTCTCTGTaGAAATTAGTTCCTCTTCACTCTCTTCCTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YTPPQRLRCCSL*KLVPLHSLPCL Trigger: AAGACAAGGAAGAGAGTGAAGAGGAACTAATTTTCACAGAGAGCAACAGCGAAGTCTCTGAGGAGGTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | GCTTCAGCAAATCGGGATAAGGTCTGGGTGGTGATGTTCTCTATATaGTTCAGATTAACTTCTGTCGTATCAGGGTCATTGTTTCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: ASANRDKVWVVMFSI*FRLTSVVSGSLFLI Trigger: GATTAGAAACAATGACCCTGATACGACAGAAGTTAATCTGAACAATATAGAGAACATCACCACCCAGACCTTATCCCGATTTGCTGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS GCA 72 bp | CTGGTGACTCGGAGTTCCTCTGTGTTCTTCCACTGTTaGCGTTGGTTAAATTTATATTTTCTATTTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVTRSSSVFFHC*RWLNLYFLFGF Trigger: AAAGCCAAATAGAAAATATAAATTTAACCAACGGCAACAGTGGAAGAACACAGAGGAACTCCGAGTCACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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| CDS CAA 90 bp | ATGTTCTCTATATTGTTCAGATTAACTTCTGTCGTATCAGGGTCATaGTTTCTAATCTTTTCCAGAGCATCCTCAATAACAGTGGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: MFSILFRLTSVVSGS*FLIFSRASSITVGF Trigger: AAATCCCACTGTTATTGAGGATGCTCTGGAAAAGATTAGAAACAATGACCCTGATACGACAGAAGTTAATCTGAACAATATAGAGAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031694.8 |
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