Pregenerated sensors for LMO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030226Ensembl transcript IDs: ENSMUST00000160050.2, ENSMUST00000161450.8, ENSMUST00000162185.8, ENSMUST00000162772.8, ENSMUST00000162932.2, ENSMUST00000163024.8, ENSMUST00000163065.8, ENSMUST00000203435.3
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCATTGTTGGGGAGACGCTGCTGCGGGCTCAGCGGACCTGGGGTaGATAGCCTTCTTTCATGAGGCCTTCCTCGTAGTCTGTCTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: LHCWGDAAAGSADLG*IAFFHEAFLVVCLA Trigger: TGCCAGACAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATGCACCCCAGGTCCGCTGAGCCCGCAGCAGCGTCTCCCCAACAATGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR TCA 90 bp | CGCTGCTGCGGGCTCAGCGGACCTGGGGTGCATAGCCTTCTTTCATaGGGCCTTCCTCGTAGTCTGTCTGGCAAAGAATCATATTGTTCT | + |
|
Preference number: 1 (lower is better) Translates to: RCCGLSGPGVHSLLS*GLPRSLSGKESYCS Trigger: AGAACAATATGATTCTTTGCCAGACAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATGCACCCCAGGTCCGCTGAGCCCGCAGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR GCA 90 bp | CACTACATACAGATGCAGTCCACCTTCTCCTCCACATGGCCATCCTaGTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTG | + |
|
Preference number: 1 (lower is better) Translates to: HYIQMQSTFSSTWPS*SPTATLFSRFLCRL Trigger: CAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAGCAGGATGGCCATGTGGAGGAGAAGGTGGACTGCATCTGTATGTAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 90 bp | TCCTTCAGGAATCTCCAGCAGTCTCAGGGAAAGGAGCAGCTGCTATaGCTTCCTCAGGCTTGTTGGGATTTGGGTTTAGAGAGGGACATA | + |
|
Preference number: 1 (lower is better) Translates to: SFRNLQQSQGKEQLL*LPQACWDLGLERDI Trigger: TATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCCTGAGACTGCTGGAGATTCCTGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CCA 90 bp | CAGTCTCAGGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTTGTTaGGATTTGGGTTTAGAGAGGGACATAAGGTTGCATTTTCCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: QSQGKEQLLWLPQAC*DLGLERDIRLHFPV Trigger: CACAGGAAAATGCAACCTTATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCCTGAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR GCA 90 bp | GAGAGAGCAGTGAGGATCGTCTTGCGGACCACAAGAGGACAGCTTTaGAATTCTTCATTCTACCTCGAATTTGGGCATGTGGGAGTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: ERAVRIVLRTTRGQL*NSSFYLEFGHVGVS Trigger: TGAAACTCCCACATGCCCAAATTCGAGGTAGAATGAAGAATTGCAAAGCTGTCCTCTTGTGGTCCGCAAGACGATCCTCACTGCTCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR GCA 90 bp | CGGTACACTGTGTCTGTATGGAGTGGGTTTGCAAAGTGGTCTCACTaGACAATGCAAAATGAACAGAGTGTGAGCAGAAGAGGAAGCTGT | + |
|
Preference number: 1 (lower is better) Translates to: RYTVSVWSGFAKWSH*TMQNEQSVSRRGSC Trigger: ACAGCTTCCTCTTCTGCTCACACTCTGTTCATTTTGCATTGTGCAGTGAGACCACTTTGCAAACCCACTCCATACAGACACAGTGTACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 90 bp | CGAAATGACTCAAAGCCACACCAGCACCGATTTCAGATTAGATTTTaGCCCCAGACCAAGAATGTCGGGATGGCATTTAATCACCATCTG | + |
|
Preference number: 1 (lower is better) Translates to: RNDSKPHQHRFQIRF*PQTKNVGMAFNHHL Trigger: CAGATGGTGATTAAATGCCATCCCGACATTCTTGGTCTGGGGCCAAAATCTAATCTGAAATCGGTGCTGGTGTGGCTTTGAGTCATTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR GCA 90 bp | CTAACGTCGATAGTCTTGCTTCATCTGTGTGTCATTGTGGAGGTTTaGTCTTCAATTCTTACTAGAAAGGTACAGCTCGCTGAAAATAGC | + |
|
Preference number: 1 (lower is better) Translates to: LTSIVLLHLCVIVEV*SSILTRKVQLAENS Trigger: GCTATTTTCAGCGAGCTGTACCTTTCTAGTAAGAATTGAAGAGCAAACCTCCACAATGACACACAGATGAAGCAAGACTATCGACGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 90 bp | TATGTCGTGACTGGGGTAATACCGTTCTCATTTAGAATAACCCTTTaGAAGTTGTTCACATGCTACCCAAAGGCACTAGTTCAAATAGGG | + |
|
Preference number: 1 (lower is better) Translates to: YVVTGVIPFSFRITL*KLFTCYPKALVQIG Trigger: CCCTATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAGGGTTATTCTAAATGAGAACGGTATTACCCCAGTCACGACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 90 bp | GACCACAAGAGGACAGCTTTGCAATTCTTCATTCTACCTCGAATTTaGGCATGTGGGAGTTTCACATTCTTCACAATGAGGCATTTACAA | + |
|
Preference number: 1 (lower is better) Translates to: DHKRTALQFFILPRI*ACGSFTFFTMRHLQ Trigger: TTGTAAATGCCTCATTGTGAAGAATGTGAAACTCCCACATGCCCAAATTCGAGGTAGAATGAAGAATTGCAAAGCTGTCCTCTTGTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR TCA 90 bp | CCTCATCTCCTAGGGAGAAATCTGGACAACATTTACACAAGAAGTTaGAAACTTTTAAATTATGTCGTGACTGGGGTAATACCGTTCTCA | + |
|
Preference number: 1 (lower is better) Translates to: PHLLGRNLDNIYTRS*KLLNYVVTGVIPFS Trigger: TGAGAACGGTATTACCCCAGTCACGACATAATTTAAAAGTTTTCAACTTCTTGTGTAAATGTTGTCCAGATTTCTCCCTAGGAGATGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCTGCTATGGCTTCCTCAGGCTTGTTGGGATTTGGGTTTAGAGAGGGACATTGGTGGGATGGGGGTTaGCTGGCCCCTCGTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AAAMASSGLLGFGFREGHWWDGG*LAPRQK Trigger: CTTCTGACGAGGGGCCAGTCAACCCCCATCCCACCA...ATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCATCCTGCTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTGATAGTGCTTTGCATTGTTaGGGAGACGCTGCTGCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: AILLTYRYPIQQVPVSIDSALHC*GDAAAG Trigger: GCCCGCAGCAGCGTCTCCCCAACAATGCAAAGCACT...ATCAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAGCAGGATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTTGTTGGGATTTGGGTTTAGAAGTGCTTTGCATTGTTaGGGAGACGCTGCTGCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GKGAAAMASSGLLGFGFRSALHC*GDAAAG Trigger: GCCCGCAGCAGCGTCTCCCCAACAATGCAAAGCACT...TCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTTGTTGGGATTTGGGTTTAGAAAACTACTTCTTGCTTaGATCTCCCCCACACCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: GKGAAAMASSGLLGFGFRKLLLA*ISPTPA Trigger: GGCGGGTGTGGGGGAGATGCAAGCAAGAAGTAGTTT...TCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CAA 90 bp | CCAGCAGTCTCAGGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTaGTTGGGATTTGGGTTTAGAGAGGGACATAAGGTTGCATTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PAVSGKGAAAMASSG*LGFGFREGHKVAFS Trigger: GGAAAATGCAACCTTATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCCTGAGACTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCATCCTGCTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTGATGCAAAGCAGTCCAGGTaGTACACATTATCCTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AILLTYRYPIQQVPVSIDAKQSR*YTLSLA Trigger: TGCCAAGGATAATGTGTACCACCTGGACTGCTTTGC...ATCAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAGCAGGATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR CAA 90 bp | GCAGTCTCAGGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTTGTaGGGATTTGGGTTTAGAGAGGGACATAAGGTTGCATTTTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AVSGKGAAAMASSGL*GFGFREGHKVAFSC Trigger: ACAGGAAAATGCAACCTTATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCCTGAGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CAA 90 bp | ATCACAAAGCAAGTTTGTGGGGCTGAGAGAGCAGTGAGGATCGTCTaGCGGACCACAAGAGGACAGCTTTGCAATTCTTCATTCTACCTC | + |
|
Preference number: 2 (lower is better) Translates to: ITKQVCGAERAVRIV*RTTRGQLCNSSFYL Trigger: GAGGTAGAATGAAGAATTGCAAAGCTGTCCTCTTGTGGTCCGCAAGACGATCCTCACTGCTCTCTCAGCCCCACAAACTTGCTTTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCGAAATACATCATCACCAAGCAGCTCTCAACTTTTTACCAATCTCTCTACTTACAGTTCCAAGGCTGTaGGCAGATCCCAGGGCGACT | + |
|
Preference number: 2 (lower is better) Translates to: GEIHHHQAALNFLPISLLTVPRL*ADPRAT Trigger: AGTCGCCCTGGGATCTGCTCACAGCCTTGGAACTGT...AAGTAGAGAGATTGGTAAAAAGTTGAGAGCTGCTTGGTGATGATGTATTTCGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR TCA 90 bp | GGATCGTCTTGCGGACCACAAGAGGACAGCTTTGCAATTCTTCATTCTACCTCGGTAAAACCGCAGTGTTaGCTTTTCTTGGGAGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: GSSCGPQEDSFAILHSTSVKPQC*LFLGAN Trigger: ATTTGCTCCCAAGAAAAGTCAACACTGCGGTTTTAC...CGAGGTAGAATGAAGAATTGCAAAGCTGTCCTCTTGTGGTCCGCAAGACGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGTGCATAGCCTTCTTTCATGAGGCCTTCCTCGTAGTCTGTCTGGCAAAGAATCACAAAATCTCTGATTaGAAAGCTGACAGGCAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GCIAFFHEAFLVVCLAKNHKISD*KADRQS Trigger: GCTTTGCCTGTCAGCTTTGCAATCAGAGATTTTGTG...ATTCTTTGCCAGACAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATGCACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCACATAAGTACAATGGCAGAGAGCCTCCTCCTTCAGGAATCTCCAGCAGTCCACTGGCTGGGGAAATaGTTAATACAAGTAACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SHISTMAESLLLQESPAVHWLGK*LIQVTV Trigger: CACTGTTACTTGTATTAACCATTTCCCCAGCCAGTG...GACTGCTGGAGATTCCTGAAGGAGGAGGCTCTCTGCCATTGTACTTATGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCACATAAGTACAATGGCAGAGAGCCTCCTCCTTCAGGAATCTCCAGCAGTCCCAAGAATGTCGGGATaGCATTTAATCACCATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SHISTMAESLLLQESPAVPRMSG*HLITIC Trigger: ACAGATGGTGATTAAATGCCATCCCGACATTCTTGG...GACTGCTGGAGATTCCTGAAGGAGGAGGCTCTCTGCCATTGTACTTATGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGGAAGTTGTTCACATGCTACCCAAAGGCACTAGTTCAAATAGGGCGTGTGTTCACTACATACAGATaGAGTCCACCTTCTCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LWKLFTCYPKALVQIGRVFTTYR*SPPSPP Trigger: TGGAGGAGAAGGTGGACTGCATCTGTATGTAGTGAA...CACACGCCCTATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 90 bp | GTGACTGGGGTAATACCGTTCTCATTTAGAATAACCCTTTGGAAGTaGTTCACATGCTACCCAAAGGCACTAGTTCAAATAGGGCGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VTGVIPFSFRITLWK*FTCYPKALVQIGRV Trigger: CACACGCCCTATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAGGGTTATTCTAAATGAGAACGGTATTACCCCAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 90 bp | GGCAAGGCAAGGATAGCTGAAGAGCTTTCAGAAACTGAGAAAAGTTaGTTTCCACCGACACACGTTTTGACCTGTCAGAGACAATCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: GKARIAEELSETEKS*FPPTHVLTCQRQSE Trigger: TTCAGATTGTCTCTGACAGGTCAAAACGTGTGTCGGTGGAAACAAACTTTTCTCAGTTTCTGAAAGCTCTTCAGCTATCCTTGCCTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGCATAGCCTTCTTTCATaGGGCCTTCCTCGTAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: NNEHSTLERGQFHYIQMQHSLLS*GLPRSL Trigger: CAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATG...CTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR CAA 90 bp | ATTTCCTGTACAACAATGGAGAACAAACTAAGTAAAACCGCAGTGTaGACTTTTCTTGGGAGCAAATACGGTACACTGTGTCTGTATGGA | + |
|
Preference number: 2 (lower is better) Translates to: ISCTTMENKLSKTAV*TFLGSKYGTLCLYG Trigger: TCCATACAGACACAGTGTACCGTATTTGCTCCCAAGAAAAGTCAACACTGCGGTTTTACTTAGTTTGTTCTCCATTGTTGTACAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTACCAATCTCTCTACTTCTCTTCTCGGTTTCTGTACAGACAGTTCCAAGGCGGCATAAAACGAAAGTaGTTTAAGCTGAAATCGTTA | + |
|
Preference number: 2 (lower is better) Translates to: FYQSLYFSSRFLYRQFQGGIKRK*FKLKSL Trigger: TAACGATTTCAGCTTAAAGCACTTTCGTTTTATGCC...GCCTTGGAACTGTCTGTACAGAAACCGAGAAGAGAAGTAGAGAGATTGGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATAGGTACACATTATCCTTaGCACGCATCACCATCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: SLFNNEHSTLERGQFHYIGTHYP*HASPSQ Trigger: TTGAGATGGTGATGCGTGCCAAGGATAATGTGTACC...TATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAATAACCCTTTGGAAGTTGTTCACATGCTACCCAAAGGCACTAGTTCAAATATGGCACTTTTCACGTTaGCATAAAACGAAAGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RITLWKLFTCYPKALVQIWHFSR*HKTKVL Trigger: AAGCACTTTCGTTTTATGCCAACGTGAAAAGTGCCA...TATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAGGGTTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTACCAATCTCTCTACTTCTCTTCTCGGTTTCTGTACAGACAGTTCCAAGGCTTTAGAATAACCCTTTaGAAGTTGTTCACATGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: FYQSLYFSSRFLYRQFQGFRITL*KLFTCY Trigger: GTAGCATGTGAACAACTTCCAAAGGGTTATTCTAAA...GCCTTGGAACTGTCTGTACAGAAACCGAGAAGAGAAGTAGAGAGATTGGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCGAAATACATCATCACCAAGCAGCTCTCAACTTTTTACCAATCTCTCTACTTTTAGAATAACCCTTTaGAAGTTGTTCACATGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: RRNTSSPSSSQLFTNLSTFRITL*KLFTCY Trigger: GTAGCATGTGAACAACTTCCAAAGGGTTATTCTAAA...AGTAGAGAGATTGGTAAAAAGTTGAGAGCTGCTTGGTGATGATGTATTTCGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 90 bp | TTGTTTGTTTACTTGCTTATTTTTGCCTTTCTAACGTCGATAGTCTaGCTTCATCTGTGTGTCATTGTGGAGGTTTGCTCTTCAATTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LFVYLLIFAFLTSIV*LHLCVIVEVCSSIL Trigger: AAGAATTGAAGAGCAAACCTCCACAATGACACACAGATGAAGCAAGACTATCGACGTTAGAAAGGCAAAAATAAGCAAGTAAACAAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR GCA 72 bp | TGGGGAGACGCTGCTGCGGGCTCAGCGGACCTGGGGTaGATAGCCTTCTTTCATGAGGCCTTCCTCGTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: WGDAAAGSADLG*IAFFHEAFLVV Trigger: GACTACGAGGAAGGCCTCATGAAAGAAGGCTATGCACCCCAGGTCCGCTGAGCCCGCAGCAGCGTCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR CCA 72 bp | CGTTGGTCGTCCCTTAAGCTGAGCAAGCTGGTGGGATaGGGGTTGACTGGCCCCTCGTCAGAAGTAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RWSSLKLSKLVG*GLTGPSSEVAC Trigger: GCAGGCTACTTCTGACGAGGGGCCAGTCAACCCCCATCCCACCAGCTTGCTCAGCTTAAGGGACGACCAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR TCA 72 bp | GGGCTCAGCGGACCTGGGGTGCATAGCCTTCTTTCATaGGGCCTTCCTCGTAGTCTGTCTGGCAAAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: GLSGPGVHSLLS*GLPRSLSGKES Trigger: TGATTCTTTGCCAGACAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATGCACCCCAGGTCCGCTGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| 3UTR CCA 72 bp | GGAGGACAACTTCCCCAGCCTGAGAAATCAAAACTGTaGCAGGCGTCTGACCACAGCATCAGATACCATGAC | + |
|
Preference number: 3 (lower is better) Translates to: GGQLPQPEKSKL*QASDHSIRYHD Trigger: GTCATGGTATCTGATGCTGTGGTCAGACGCCTGCCACAGTTTTGATTTCTCAGGCTGGGGAAGTTGTCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCATCCTGCTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTGATAAAGGATGTAGTGCTTaGCATTGTTGGGGAGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: AILLTYRYPIQQVPVSIDKGCSA*HCWGDA Trigger: AGCGTCTCCCCAACAATGCAAAGCACTACATCCTTT...ATCAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAGCAGGATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR TCA 72 bp | CTCTTCTCGGTTTCTGTACAGACAGTTCCAAGGCTGTaGGCAGATCCCAGGGCGACTCAGCCATCAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: LFSVSVQTVPRL*ADPRATQPSEF Trigger: AAATTCTGATGGCTGAGTCGCCCTGGGATCTGCTCACAGCCTTGGAACTGTCTGTACAGAAACCGAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR GCA 72 bp | CAACTCTTGAACGGGGGCAATTTCACTACATACAGATaGAGTCCACCTTCTCCTCCACATGGCCATCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLLNGGNFTTYR*SPPSPPHGHPA Trigger: AGCAGGATGGCCATGTGGAGGAGAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR TCA 72 bp | ACTGTCATAGCTAATCACAAAGCAAGTTTGTGGGGCTaGGAGAGCAGTGAGGATCGTCTTGCGGACCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: TVIANHKASLWG*ESSEDRLADHK Trigger: CTTGTGGTCCGCAAGACGATCCTCACTGCTCTCTCAGCCCCACAAACTTGCTTTGTGATTAGCTATGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR GCA 72 bp | GTGAGGATCGTCTTGCGGACCACAAGAGGACAGCTTTaGAATTCTTCATTCTACCTCGAATTTGGGCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: VRIVLRTTRGQL*NSSFYLEFGHV Trigger: CACATGCCCAAATTCGAGGTAGAATGAAGAATTGCAAAGCTGTCCTCTTGTGGTCCGCAAGACGATCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTTCTCCTAAAGGATGTAGTGCTTaGCATTGTTGGGGAGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: QLLNGGNFTTYRCSPPSPKGCSA*HCWGDA Trigger: AGCGTCTCCCCAACAATGCAAAGCACTACATCCTTT...AGGAGAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTACTTCTCTTCTCGGTTTCTGTACAGACAGTTCCAAGGCTGTGAGCAGATCCAAAGGATGTAGTGCTTaGCATTGTTGGGGAGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: STSLLGFCTDSSKAVSRSKGCSA*HCWGDA Trigger: AGCGTCTCCCCAACAATGCAAAGCACTACATCCTTT...GGATCTGCTCACAGCCTTGGAACTGTCTGTACAGAAACCGAGAAGAGAAGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTTGTTGGGATTTGGGTTTAGAGAAACTGAGAAAAGTTaGTTTCCACCGACACACGTT | + |
|
Preference number: 3 (lower is better) Translates to: GKGAAAMASSGLLGFGFRETEKS*FPPTHV Trigger: AACGTGTGTCGGTGGAAACAAACTTTTCTCAGTTTC...TCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CCA 72 bp | CGGTACACTGTGTCTGTATGGAGTGGGTTTGCAAAGTaGTCTCACTGCACAATGCAAAATGAACAGAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RYTVSVWSGFAK*SHCTMQNEQSV Trigger: CACACTCTGTTCATTTTGCATTGTGCAGTGAGACCACTTTGCAAACCCACTCCATACAGACACAGTGTACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 72 bp | AGATTAGATTTTGGCCCCAGACCAAGAATGTCGGGATaGCATTTAATCACCATCTGTAACAGGGACACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RLDFGPRPRMSG*HLITICNRDTG Trigger: GCCAGTGTCCCTGTTACAGATGGTGATTAAATGCCATCCCGACATTCTTGGTCTGGGGCCAAAATCTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR GCA 72 bp | GTGTCTGTATGGAGTGGGTTTGCAAAGTGGTCTCACTaGACAATGCAAAATGAACAGAGTGTGAGCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VSVWSGFAKWSH*TMQNEQSVSRR Trigger: TCTTCTGCTCACACTCTGTTCATTTTGCATTGTGCAGTGAGACCACTTTGCAAACCCACTCCATACAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 72 bp | TTGGGAGCAAATACGGTACACTGTGTCTGTATGGAGTaGGTTTGCAAAGTGGTCTCACTGCACAATGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGANTVHCVCME*VCKVVSLHNAK Trigger: TTTTGCATTGTGCAGTGAGACCACTTTGCAAACCCACTCCATACAGACACAGTGTACCGTATTTGCTCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 72 bp | TTTTCTTGGGAGCAAATACGGTACACTGTGTCTGTATaGAGTGGGTTTGCAAAGTGGTCTCACTGCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: FSWEQIRYTVSV*SGFAKWSHCTM Trigger: CATTGTGCAGTGAGACCACTTTGCAAACCCACTCCATACAGACACAGTGTACCGTATTTGCTCCCAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 72 bp | TCAAAGCCACACCAGCACCGATTTCAGATTAGATTTTaGCCCCAGACCAAGAATGTCGGGATGGCATTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: SKPHQHRFQIRF*PQTKNVGMAFN Trigger: ATTAAATGCCATCCCGACATTCTTGGTCTGGGGCCAAAATCTAATCTGAAATCGGTGCTGGTGTGGCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGAAGTTGTTCACATGCTACCCAAAGGCACTAGTTCAAATAGGGCGTGTGATGAACATTCAACTCTaGAACGGGGGCAATTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LWKLFTCYPKALVQIGRVMNIQL*NGGNFT Trigger: AGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCAT...CACACGCCCTATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTTCTTGGGAGCAAATACGGTACACTGTGTCTGTATGGAGTGGGTTTGCAAATGAACATTCAACTCTaGAACGGGGGCAATTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: TFLGSKYGTLCLYGVGLQMNIQL*NGGNFT Trigger: AGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCAT...TTGCAAACCCACTCCATACAGACACAGTGTACCGTATTTGCTCCCAAGAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 72 bp | AGGACAGCTTTGCAATTCTTCATTCTACCTCGAATTTaGGCATGTGGGAGTTTCACATTCTTCACAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTALQFFILPRI*ACGSFTFFTMR Trigger: CCTCATTGTGAAGAATGTGAAACTCCCACATGCCCAAATTCGAGGTAGAATGAAGAATTGCAAAGCTGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCGAAATACATCATCACCAAGCAGCTCTCAACTTTTTACCAATCTCTCTACTTCTAACGTCGATAGTCTaGCTTCATCTGTGTGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: GEIHHHQAALNFLPISLLLTSIV*LHLCVI Trigger: AATGACACACAGATGAAGCAAGACTATCGACGTTAG...AAGTAGAGAGATTGGTAAAAAGTTGAGAGCTGCTTGGTGATGATGTATTTCGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR TCA 72 bp | AGTGGTCTCACTGCACAATGCAAAATGAACAGAGTGTaGGCAGAAGAGGAAGCTGTATTCTTGGTTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: SGLTAQCKMNRV*AEEEAVFLVLF Trigger: AAATAAAACCAAGAATACAGCTTCCTCTTCTGCTCACACTCTGTTCATTTTGCATTGTGCAGTGAGACCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CCA 72 bp | TTTGCAATTCTTCATTCTACCTCGAATTTGGGCATGTaGGAGTTTCACATTCTTCACAATGAGGCATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: FAILHSTSNLGM*EFHILHNEAFT Trigger: TGTAAATGCCTCATTGTGAAGAATGTGAAACTCCCACATGCCCAAATTCGAGGTAGAATGAAGAATTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CAA 72 bp | TCGTCCCTTAAGCTGAGCAAGCTGGTGGGATGGGGGTaGACTGGCCCCTCGTCAGAAGTAGCCTGCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSLKLSKLVGWG*TGPSSEVACRD Trigger: ATCTCTGCAGGCTACTTCTGACGAGGGGCCAGTCAACCCCCATCCCACCAGCTTGCTCAGCTTAAGGGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGTTGGAAGATGGCAGTGATCAGGAGGGACCGAGGAAGTGTGACAGCAAATTCTCAAAGGCAGGGATaGGCTTGCTACAGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSWKMAVIRRDRGSVTANSQRQG*ACYRQR Trigger: GCGCTGCCTGTAGCAAGCTCATCCCTGCCTTTGAGA...ATTTGCTGTCACACTTCCTCGGTCCCTCCTGATCACTGCCATCTTCCAACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCTGCTATGGCTTCCTCAGGCTTGTTGGGATTTGGGTTTAGAGAGGGACATGGAGATACCGGTCCTTaGTTTTTCGGTTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAAMASSGLLGFGFREGHGDTGP*FFGCSQ Trigger: CTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCC...ATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| CDS-3UTR TCA 90 bp | CATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTTCTCTCAAAGGCAGGGATaGGCTTGCTACAGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSTLERGQFHYIQMQSTFSQRQG*ACYRQR Trigger: GCGCTGCCTGTAGCAAGCTCATCCCTGCCTTTGAGA...GAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | GGATCGTCTTGCGGACCACAAGAGGACAGCTTTGCAATTCTTCATTCTACCTCGGCCAGCACAACCTTTTaGCTTGGTGTCTGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GSSCGPQEDSFAILHSTSASTTF*LGVWLN Trigger: GTTCAGCCAGACACCAAGCCAAAAGGTTGTGCTGGC...CGAGGTAGAATGAAGAATTGCAAAGCTGTCCTCTTGTGGTCCGCAAGACGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CAA 72 bp | CAAGTTTGTGGGGCTGAGAGAGCAGTGAGGATCGTCTaGCGGACCACAAGAGGACAGCTTTGCAATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVCGAERAVRIV*RTTRGQLCNSS Trigger: TGAAGAATTGCAAAGCTGTCCTCTTGTGGTCCGCAAGACGATCCTCACTGCTCTCTCAGCCCCACAAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CAA 72 bp | CAGGAACTAGCAGGGCTGTGTATTAGAAACTACTTCTaGCTTGCATCTCCCCCACACCCGCCCTCTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: QELAGLCIRNYF*LASPPHPPSVS Trigger: AGATACAGAGGGCGGGTGTGGGGGAGATGCAAGCAAGAAGTAGTTTCTAATACACAGCCCTGCTAGTTCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| 3UTR CAA 72 bp | GGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTTGTaGGGATTTGGGTTTAGAGAGGGACATAAGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GKGAAAMASSGL*GFGFREGHKVA Trigger: TGCAACCTTATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| CDS-3UTR TCA 90 bp | AATACGGTACACTGTGTCTGTATGGAGTGGGTTTGCAAAGTGGTCTCACTGCACGGAGATACCGGTCCTTaGTTTTTCGGTTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTVHCVCMEWVCKVVSLHGDTGP*FFGCSQ Trigger: CTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCC...GTGCAGTGAGACCACTTTGCAAACCCACTCCATACAGACACAGTGTACCGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR GCA 90 bp | TTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTTCTCCTCCACATTCAGCGGACCTGGGGTaGATAGCCTTCTTTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNGGNFTTYRCSPPSPPHSADLG*IAFFHE Trigger: CTCATGAAAGAAGGCTATGCACCCCAGGTCCGCTGA...ATGTGGAGGAGAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTGGAAGATGGCAGTGATCAGGAGGGACCGAGGAAGTGTGACAGCAAATCACAACCTTTTGGCTTaGTGTCTGGCTGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSWKMAVIRRDRGSVTANHNLLA*CLAELR Trigger: TCTCAGTTCAGCCAGACACCAAGCCAAAAGGTTGTG...ATTTGCTGTCACACTTCCTCGGTCCCTCCTGATCACTGCCATCTTCCAACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTTCTCCGCCAGCACAACCTTTTaGCTTGGTGTCTGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: STLERGQFHYIQMQSTFSASTTF*LGVWLN Trigger: GTTCAGCCAGACACCAAGCCAAAAGGTTGTGCTGGC...GGAGAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | GCCATCCTGCTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTGATGGTACACATTATCCTTaGCACGCATCACCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AILLTYRYPIQQVPVSIDGTHYP*HASPSQ Trigger: TTGAGATGGTGATGCGTGCCAAGGATAATGTGTACC...ATCAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAGCAGGATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 72 bp | TCAGGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTaGTTGGGATTTGGGTTTAGAGAGGGACATAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGKGAAAMASSG*LGFGFREGHKV Trigger: AACCTTATGTCCCTCTCTAAACCCAAATCCCAACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| CDS-3UTR TCA 90 bp | CTTTGGAAGTTGTTCACATGCTACCCAAAGGCACTAGTTCAAATAGGGCGTGTGGGAGATACCGGTCCTTaGTTTTTCGGTTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWKLFTCYPKALVQIGRVGDTGP*FFGCSQ Trigger: CTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCC...CACACGCCCTATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | TCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTTCTCCCATAGCCTTCTTTCATaGGGCCTTCCTCGTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STLERGQFHYIQMQSTFSHSLLS*GLPRSL Trigger: CAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATG...GGAGAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCACCGATTTCAGATTAGATTTTGGCCCCAGACCAAGAATGTCGGGATGGCACAACCTTTTGGCTTaGTGTCTGGCTGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSTDFRLDFGPRPRMSGWHNLLA*CLAELR Trigger: TCTCAGTTCAGCCAGACACCAAGCCAAAAGGTTGTG...CCATCCCGACATTCTTGGTCTGGGGCCAAAATCTAATCTGAAATCGGTGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | GAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCCATAGCCTTCTTTCATaGGGCCTTCCTCGTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EHSTLERGQFHYIQMQSTHSLLS*GLPRSL Trigger: CAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATG...GGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTTCTCCCACAACCTTTTGGCTTaGTGTCTGGCTGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: STLERGQFHYIQMQSTFSHNLLA*CLAELR Trigger: TCTCAGTTCAGCCAGACACCAAGCCAAAAGGTTGTG...GGAGAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTTTCATGAGGCCTTCCTCGTAGTCTGTCTGGCAAAGAATCATATTGTTGCCAGCACAACCTTTTaGCTTGGTGTCTGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AFFHEAFLVVCLAKNHIVASTTF*LGVWLN Trigger: GTTCAGCCAGACACCAAGCCAAAAGGTTGTGCTGGC...AACAATATGATTCTTTGCCAGACAGACTACGAGGAAGGCCTCATGAAAGAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160050.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCACCGATTTCAGATTAGATTTTGGCCCCAGACCAAGAATGTCGGGATGGGGTACACATTATCCTTaGCACGCATCACCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TSTDFRLDFGPRPRMSGWGTHYP*HASPSQ Trigger: TTGAGATGGTGATGCGTGCCAAGGATAATGTGTACC...CCATCCCGACATTCTTGGTCTGGGGCCAAAATCTAATCTGAAATCGGTGCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTTCTCCGCAAAGCAGTCCAGGTaGTACACATTATCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STLERGQFHYIQMQSTFSAKQSR*YTLSLA Trigger: TGCCAAGGATAATGTGTACCACCTGGACTGCTTTGC...GGAGAAGGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | AATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCTCAAAGGCAGGGATaGGCTTGCTACAGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NNEHSTLERGQFHYIQMQSQRQG*ACYRQR Trigger: GCGCTGCCTGTAGCAAGCTCATCCCTGCCTTTGAGA...CTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 72 bp | AGTGAGGATCGTCTTGCGGACCACAAGAGGACAGCTTaGCAATTCTTCATTCTACCTCGAATTTGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SEDRLADHKRTA*QFFILPRIWAC Trigger: ACATGCCCAAATTCGAGGTAGAATGAAGAATTGCAAAGCTGTCCTCTTGTGGTCCGCAAGACGATCCTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| CDS-3UTR GCA 90 bp | TCTACTTCTCTTCTCGGTTTCTGTACAGACAGTTCCAAGGCTGTGAGCAGATCCCACAAAATCTCTGATTaGAAAGCTGACAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STSLLGFCTDSSKAVSRSHKISD*KADRQS Trigger: GCTTTGCCTGTCAGCTTTGCAATCAGAGATTTTGTG...GGATCTGCTCACAGCCTTGGAACTGTCTGTACAGAAACCGAGAAGAGAAGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGAAATACATCATCACCAAGCAGCTCTCAACTTTTTACCAATCTCTCTACTTCAGCGGACCTGGGGTaGATAGCCTTCTTTCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRNTSSPSSSQLFTNLSTSADLG*IAFFHE Trigger: CTCATGAAAGAAGGCTATGCACCCCAGGTCCGCTGA...AGTAGAGAGATTGGTAAAAAGTTGAGAGCTGCTTGGTGATGATGTATTTCGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTGATTCTTATATACACAACCTTTTGGCTTaGTGTCTGGCTGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTYRYPIQQVPVSIDSYIHNLLA*CLAELR Trigger: TCTCAGTTCAGCCAGACACCAAGCCAAAAGGTTGTG...TATATAAGAATCAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATATCTCAAAGGCAGGGATaGGCTTGCTACAGGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLFNNEHSTLERGQFHYISQRQG*ACYRQR Trigger: GCGCTGCCTGTAGCAAGCTCATCCCTGCCTTTGAGA...TATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | CTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTGATTCTTATATAGGTACACATTATCCTTaGCACGCATCACCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTYRYPIQQVPVSIDSYIGTHYP*HASPSQ Trigger: TTGAGATGGTGATGCGTGCCAAGGATAATGTGTACC...TATATAAGAATCAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 72 bp | AGCAAATACGGTACACTGTGTCTGTATGGAGTGGGTTaGCAAAGTGGTCTCACTGCACAATGCAAAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKYGTLCLYGVG*QSGLTAQCKMN Trigger: GTTCATTTTGCATTGTGCAGTGAGACCACTTTGCAAACCCACTCCATACAGACACAGTGTACCGTATTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 72 bp | AGGATAGCTGAAGAGCTTTCAGAAACTGAGAAAAGTTaGTTTCCACCGACACACGTTTTGACCTGTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RIAEELSETEKS*FPPTHVLTCQR Trigger: TCTCTGACAGGTCAAAACGTGTGTCGGTGGAAACAAACTTTTCTCAGTTTCTGAAAGCTCTTCAGCTATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| CDS-3UTR TCA 90 bp | ATTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACGGAGATACCGGTCCTTaGTTTTTCGGTTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITSLFNNEHSTLERGQFHGDTGP*FFGCSQ Trigger: CTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCC...GTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATAGGAGATACCGGTCCTTaGTTTTTCGGTTGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLFNNEHSTLERGQFHYIGDTGP*FFGCSQ Trigger: CTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCC...TATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | AATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGCACAACCTTTTGGCTTaGTGTCTGGCTGAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NNEHSTLERGQFHYIQMQHNLLA*CLAELR Trigger: TCTCAGTTCAGCCAGACACCAAGCCAAAAGGTTGTG...CTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATAGCCAGCACAACCTTTTaGCTTGGTGTCTGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLFNNEHSTLERGQFHYIASTTF*LGVWLN Trigger: GTTCAGCCAGACACCAAGCCAAAAGGTTGTGCTGGC...TATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | TTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTGCCAGCACAACCTTTTaGCTTGGTGTCTGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSLIMNIQLLNGGNFTASTTF*LGVWLN Trigger: GTTCAGCCAGACACCAAGCCAAAAGGTTGTGCTGGC...AGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | GGCGAAATACATCATCACCAAGCAGCTCTCAACTTTTTACCAATCTCTCTACTTGGTACACATTATCCTTaGCACGCATCACCATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GEIHHHQAALNFLPISLLGTHYP*HASPSQ Trigger: TTGAGATGGTGATGCGTGCCAAGGATAATGTGTACC...AAGTAGAGAGATTGGTAAAAAGTTGAGAGCTGCTTGGTGATGATGTATTTCGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACATAGCCTTCTTTCATaGGGCCTTCCTCGTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLFNNEHSTLERGQFHYIHSLLS*GLPRSL Trigger: CAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATG...TATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR TCA 90 bp | TTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTCATAGCCTTCTTTCATaGGGCCTTCCTCGTAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSLIMNIQLLNGGNFTHSLLS*GLPRSL Trigger: CAGACTACGAGGAAGGCCTCATGAAAGAAGGCTATG...AGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCTCACTGCACAATGCAAAATGAACAGAGTGTGAGCAGAAGAGGAAGCTGTCTGAGAGCATTTGTATaGCAAAACTTTTCTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WSHCTMQNEQSVSRRGSCLRAFV*QNFSLV Trigger: AACAAGAGAAAAGTTTTGGCATACAAATGCTCTCAG...ACAGCTTCCTCTTCTGCTCACACTCTGTTCATTTTGCATTGTGCAGTGAGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | ATTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACGCAAAGCAGTCCAGGTaGTACACATTATCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITSLFNNEHSTLERGQFHAKQSR*YTLSLA Trigger: TGCCAAGGATAATGTGTACCACCTGGACTGCTTTGC...GTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTAAATTATGTCGTGACTGGGGTAATACCGTTCTCATTTAGAATAACCCTTGCAAAGCAGTCCAGGTaGTACACATTATCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNYVVTGVIPFSFRITLAKQSR*YTLSLA Trigger: TGCCAAGGATAATGTGTACCACCTGGACTGCTTTGC...AAGGGTTATTCTAAATGAGAACGGTATTACCCCAGTCACGACATAATTTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 72 bp | TACTTGCTTATTTTTGCCTTTCTAACGTCGATAGTCTaGCTTCATCTGTGTGTCATTGTGGAGGTTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YLLIFAFLTSIV*LHLCVIVEVCS Trigger: AGAGCAAACCTCCACAATGACACACAGATGAAGCAAGACTATCGACGTTAGAAAGGCAAAAATAAGCAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 72 bp | ACAACAATGGAGAACAAACTAAGTAAAACCGCAGTGTaGACTTTTCTTGGGAGCAAATACGGTACACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TTMENKLSKTAV*TFLGSKYGTLC Trigger: ACACAGTGTACCGTATTTGCTCCCAAGAAAAGTCAACACTGCGGTTTTACTTAGTTTGTTCTCCATTGTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR GCA 90 bp | TTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCCACAAAATCTCTGATTaGAAAGCTGACAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIMNIQLLNGGNFTTYRCHKISD*KADRQS Trigger: GCTTTGCCTGTCAGCTTTGCAATCAGAGATTTTGTG...GCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR GCA 90 bp | ATACAAGTAACAGTGGGAGATATTTCCTGTACAACAATGGAGAACAAACTAAGTCACAAAATCTCTGATTaGAAAGCTGACAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IQVTVGDISCTTMENKLSHKISD*KADRQS Trigger: GCTTTGCCTGTCAGCTTTGCAATCAGAGATTTTGTG...ACTTAGTTTGTTCTCCATTGTTGTACAGGAAATATCTCCCACTGTTACTTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| 3UTR CAA 72 bp | GTAATACCGTTCTCATTTAGAATAACCCTTTGGAAGTaGTTCACATGCTACCCAAAGGCACTAGTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: VIPFSFRITLWK*FTCYPKALVQI Trigger: TATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAGGGTTATTCTAAATGAGAACGGTATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTTCTCGGTTTCTGTACAGACAGTTCCAAGGCTGTGAGCAGATCCCAGGGCAAGGCAGGGATGAGCTaGCTACAGGCAGCGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLGFCTDSSKAVSRSQGKAGMS*LQAAQF Trigger: AAACTGCGCTGCCTGTAGCAAGCTCATCCCTGCCTT...GCCCTGGGATCTGCTCACAGCCTTGGAACTGTCTGTACAGAAACCGAGAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGTTGGAAGATGGCAGTGATCAGGAGGGACCGAGGAAGTGTGACAGCAAATAAGGCAGGGATGAGCTaGCTACAGGCAGCGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSWKMAVIRRDRGSVTANKAGMS*LQAAQF Trigger: AAACTGCGCTGCCTGTAGCAAGCTCATCCCTGCCTT...ATTTGCTGTCACACTTCCTCGGTCCCTCCTGATCACTGCCATCTTCCAACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCCAGCAGTCTCAGGGAAAGGAGCAGCTGCTATGGCTTCCTCAGGCTTGTTTCCTCATGCCAGTATTaGTCCAGTGCCTTTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ISSSLRERSSCYGFLRLVSSCQY*SSAFRR Trigger: TCTCCTAAAGGCACTGGACAAATACTGGCATGAGGA...AACAAGCCTGAGGAAGCCATAGCAGCTGCTCCTTTCCCTGAGACTGCTGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162772.8 |
||
| CDS TCA 90 bp | CCTCATGCCAGTATTTGTCCAGTGCCTTTAGGAGATACCGGTCCTTaGTTTTTCGGTTGCAGCCAGCACAACCTTTTGGCTTGGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PHASICPVPLGDTGP*FFGCSQHNLLAWCL Trigger: CAGACACCAAGCCAAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCCTAAAGGCACTGGACAAATACTGGCATGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162185.8 ENSMUST00000162772.8 ENSMUST00000162932.2 ENSMUST00000163024.8 ENSMUST00000163065.8 ENSMUST00000203435.3 |
||
| CDS-3UTR CAA 90 bp | CTCACCTACCGCTACCCTATTCAGCAGGTTCCTGTGTCGATTGATTCTTATATAAAGGCAGGGATGAGCTaGCTACAGGCAGCGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTYRYPIQQVPVSIDSYIKAGMS*LQAAQF Trigger: AAACTGCGCTGCCTGTAGCAAGCTCATCCCTGCCTT...TATATAAGAATCAATCGACACAGGAACCTGCTGAATAGGGTAGCGGTAGGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGCACCGATTTCAGATTAGATTTTGGCCCCAGACCAAGAATGTCGGGATGGTCCTTGATTTTTCGGTaGCAGCCAGCACAACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSTDFRLDFGPRPRMSGWSLIFR*QPAQPF Trigger: AAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGA...CCATCCCGACATTCTTGGTCTGGGGCCAAAATCTAATCTGAAATCGGTGCTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | GAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCACCTCCTTGATTTTTCGGTaGCAGCCAGCACAACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EHSTLERGQFHYIQMQSTSLIFR*QPAQPF Trigger: AAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGA...GGTGGACTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | CTTTGGAAGTTGTTCACATGCTACCCAAAGGCACTAGTTCAAATAGGGCGTGTGTCCTTGATTTTTCGGTaGCAGCCAGCACAACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LWKLFTCYPKALVQIGRVSLIFR*QPAQPF Trigger: AAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGA...CACACGCCCTATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | ATACATCATCACCAAGCAGCTCTCAACTTTTTACCAATCTCTCTACTTCTCTTCAGGAGATACCGGTCCTaGATTTTTCGGTTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IHHHQAALNFLPISLLLFRRYRS*IFRLQP Trigger: TGGCTGCAACCGAAAAATCAAGGACCGGTATCTCCT...GAAGAGAAGTAGAGAGATTGGTAAAAAGTTGAGAGCTGCTTGGTGATGATGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | ATTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACAAGGCAGGGATGAGCTaGCTACAGGCAGCGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITSLFNNEHSTLERGQFHKAGMS*LQAAQF Trigger: AAACTGCGCTGCCTGTAGCAAGCTCATCCCTGCCTT...GTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | AATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCTCATGCCAGTATTaGTCCAGTGCCTTTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: NNEHSTLERGQFHYIQMQSSCQY*SSAFRR Trigger: TCTCCTAAAGGCACTGGACAAATACTGGCATGAGGA...CTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | AGAATAACCCTTTGGAAGTTGTTCACATGCTACCCAAAGGCACTAGTTCAAATATCCTTGATTTTTCGGTaGCAGCCAGCACAACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RITLWKLFTCYPKALVQISLIFR*QPAQPF Trigger: AAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGA...TATTTGAACTAGTGCCTTTGGGTAGCATGTGAACAACTTCCAAAGGGTTATTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | AATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCAGTCCTTGATTTTTCGGTaGCAGCCAGCACAACCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NNEHSTLERGQFHYIQMQSLIFR*QPAQPF Trigger: AAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGA...CTGCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | TTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTAGGAGATACCGGTCCTaGATTTTTCGGTTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLSLIMNIQLLNGGNFTRRYRS*IFRLQP Trigger: TGGCTGCAACCGAAAAATCAAGGACCGGTATCTCCT...AGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATAAGGAGATACCGGTCCTaGATTTTTCGGTTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLFNNEHSTLERGQFHYIRRYRS*IFRLQP Trigger: TGGCTGCAACCGAAAAATCAAGGACCGGTATCTCCT...TATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | ATTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACAGGAGATACCGGTCCTaGATTTTTCGGTTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ITSLFNNEHSTLERGQFHRRYRS*IFRLQP Trigger: TGGCTGCAACCGAAAAATCAAGGACCGGTATCTCCT...GTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | TTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTACATACAGATGCTCCTCATGCCAGTATTaGTCCAGTGCCTTTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LIMNIQLLNGGNFTTYRCSSCQY*SSAFRR Trigger: TCTCCTAAAGGCACTGGACAAATACTGGCATGAGGA...GCATCTGTATGTAGTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTAAATTATGTCGTGACTGGGGTAATACCGTTCTCATTTAGAATAACCCTTTCCTCATGCCAGTATTaGTCCAGTGCCTTTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLNYVVTGVIPFSFRITLSSCQY*SSAFRR Trigger: TCTCCTAAAGGCACTGGACAAATACTGGCATGAGGA...AAGGGTTATTCTAAATGAGAACGGTATTACCCCAGTCACGACATAATTTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000160050.2 ENSMUST00000162772.8 ENSMUST00000163065.8 |
||
| CDS-3UTR CAA 90 bp | ATTACTTCTCTCTTTAATAATGAACATTCAACTCTTGAACGGGGGCAATTTCACTCCTCATGCCAGTATTaGTCCAGTGCCTTTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ITSLFNNEHSTLERGQFHSSCQY*SSAFRR Trigger: TCTCCTAAAGGCACTGGACAAATACTGGCATGAGGA...GTGAAATTGCCCCCGTTCAAGAGTTGAATGTTCATTATTAAAGAGAGAAGTAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162772.8 ENSMUST00000163024.8 ENSMUST00000163065.8 |
||
| CDS CAA 72 bp | CAGTATTTGTCCAGTGCCTTTAGGAGATACCGGTCCTaGATTTTTCGGTTGCAGCCAGCACAACCTTTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: QYLSSAFRRYRS*IFRLQPAQPFG Trigger: GCCAAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCCTAAAGGCACTGGACAAATACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162185.8 ENSMUST00000162772.8 ENSMUST00000162932.2 ENSMUST00000163024.8 ENSMUST00000163065.8 ENSMUST00000203435.3 |
||
| CDS TCA 72 bp | AGTATTTGTCCAGTGCCTTTAGGAGATACCGGTCCTTaGTTTTTCGGTTGCAGCCAGCACAACCTTTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SICPVPLGDTGP*FFGCSQHNLLA Trigger: AGCCAAAAGGTTGTGCTGGCTGCAACCGAAAAATCAAGGACCGGTATCTCCTAAAGGCACTGGACAAATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000160050.2 ENSMUST00000161450.8 ENSMUST00000162185.8 ENSMUST00000162772.8 ENSMUST00000162932.2 ENSMUST00000163024.8 ENSMUST00000163065.8 ENSMUST00000203435.3 |
||