Pregenerated sensors for LMNTD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054966Ensembl transcript IDs: ENSMUST00000111706.8, ENSMUST00000111708.9, ENSMUST00000148739.8, ENSMUST00000149666.2
Found 310 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCTTCAGGAATGCCTGTGTGGTTCTTCAGCTTGTGCGTGGAATGCTaGGGACCCGGGGGCTGGGGCAGCAGGACTGGCAGCTCCGCCCTC | + |
Preference number: 1 (lower is better) Translates to: SSGMPVWFFSLCVEC*GPGGWGSRTGSSAL Trigger: GAGGGCGGAGCTGCCAGTCCTGCTGCCCCAGCCCCCGGGTCCTCAGCATTCCACGCACAAGCTGAAGAACCACACAGGCATTCCTGAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | CCGGTCCCAGCTGCGCCCACTGCTCAGGACGTAACGGAAGTCTTCTaGATAGAAGGTTGTGTTCTTGGCAGAGCCTCTGGATTGCGACAC | + |
Preference number: 1 (lower is better) Translates to: PVPAAPTAQDVTEVF*IEGCVLGRASGLRH Trigger: GTGTCGCAATCCAGAGGCTCTGCCAAGAACACAACCTTCTATCCAGAAGACTTCCGTTACGTCCTGAGCAGTGGGCGCAGCTGGGACCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR TCA 90 bp | CAGATCTCTCTCCCTGACAGTGCCCCAATGCTCTGGGTCCCTAGCTaGGGGACTCTGTTCTCAGTCCAGTTTGGTGACCACAGTGCTCAC | + |
Preference number: 1 (lower is better) Translates to: QISLPDSAPMLWVPS*GTLFSVQFGDHSAH Trigger: GTGAGCACTGTGGTCACCAAACTGGACTGAGAACAGAGTCCCTCAGCTAGGGACCCAGAGCATTGGGGCACTGTCAGGGAGAGAGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 90 bp | AGAGGAGACACACTCTGGAGACCAGGTGGGCAGCCCACTGCATCTTaGTTCTGGCTAACAAGCGGTTCTCCTGTGGTAGCTACTGGATAC | + |
Preference number: 1 (lower is better) Translates to: RGDTLWRPGGQPTAS*FWLTSGSPVVATGY Trigger: GTATCCAGTAGCTACCACAGGAGAACCGCTTGTTAGCCAGAAGCAAGATGCAGTGGGCTGCCCACCTGGTCTCCAGAGTGTGTCTCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | GACACACTCTGGAGACCAGGTGGGCAGCCCACTGCATCTTGCTTCTaGCTAACAAGCGGTTCTCCTGTGGTAGCTACTGGATACTCTTGG | + |
Preference number: 1 (lower is better) Translates to: DTLWRPGGQPTASCF*LTSGSPVVATGYSW Trigger: CCAAGAGTATCCAGTAGCTACCACAGGAGAACCGCTTGTTAGCCAGAAGCAAGATGCAGTGGGCTGCCCACCTGGTCTCCAGAGTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 90 bp | GAGAGACGTGCGCCTCTGCAAGTCTCTTCAGAGTGCCTGCATCACTaGCAGATTGCTGAAGAACTCCCACATGGACTGCACACACTGTCA | + |
Preference number: 1 (lower is better) Translates to: ERRAPLQVSSECLHH*QIAEELPHGLHTLS Trigger: TGACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGGCGCACGTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR GCA 90 bp | CATCCCCAGAATGCTTTCAGATCTCTCTCCCTGACAGTGCCCCAATaGTCTGGGTCCCTAGCTGAGGGACTCTGTTCTCAGTCCAGTTTG | + |
Preference number: 1 (lower is better) Translates to: HPQNAFRSLSLTVPQ*SGSLAEGLCSQSSL Trigger: CAAACTGGACTGAGAACAGAGTCCCTCAGCTAGGGACCCAGAGCATTGGGGCACTGTCAGGGAGAGAGATCTGAAAGCATTCTGGGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 90 bp | GCCTTCACTCTCTCTGAGGCACACATGGAAAATGCTCTTCAGGAATaGCTGTGTGGTTCTTCAGCTTGTGCGTGGAATGCTGAGGACCCG | + |
Preference number: 1 (lower is better) Translates to: AFTLSEAHMENALQE*LCGSSACAWNAEDP Trigger: CGGGTCCTCAGCATTCCACGCACAAGCTGAAGAACCACACAGGCATTCCTGAAGAGCATTTTCCATGTGTGCCTCAGAGAGAGTGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 90 bp | TGCCAGATTGCTGAAGAACTCCCACATGGACTGCACACACTGTCATaGAGGAATTCCATTAGCCAAGACCCCGGGGCAGAAGTTGGGTTT | + |
Preference number: 1 (lower is better) Translates to: CQIAEELPHGLHTLS*RNSISQDPGAEVGF Trigger: AAACCCAACTTCTGCCCCGGGGTCTTGGCTAATGGAATTCCTGCATGACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR TCA 90 bp | AGCTGCTTGTCTTTGACTTGTGTTGAAATGCTGAAGAAATGGGTCTaGTGTCAGCAGAGGAGACACACTCTGGAGACCAGGTGGGCAGCC | + |
Preference number: 1 (lower is better) Translates to: SCLSLTCVEMLKKWV*CQQRRHTLETRWAA Trigger: GGCTGCCCACCTGGTCTCCAGAGTGTGTCTCCTCTGCTGACATCAGACCCATTTCTTCAGCATTTCAACACAAGTCAAAGACAAGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR TCA 90 bp | AGAGCCTCTGGATTGCGACACATGACTCCTGCTCATTGGCTACTATaGGATCTGCTTCCTTCAGAACAATCTCCCATGGCAAGCTTAGTC | + |
Preference number: 1 (lower is better) Translates to: RASGLRHMTPAHWLL*DLLPSEQSPMASLV Trigger: GACTAAGCTTGCCATGGGAGATTGTTCTGAAGGAAGCAGATCTCATAGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCCAGAGGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 90 bp | AGGTTGTGTTCTTGGCAGAGCCTCTGGATTGCGACACATGACTCCTaGTCATTGGCTACTATGAGATCTGCTTCCTTCAGAACAATCTCC | + |
Preference number: 1 (lower is better) Translates to: RLCSWQSLWIATHDS*SLATMRSASFRTIS Trigger: GGAGATTGTTCTGAAGGAAGCAGATCTCATAGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCCAGAGGCTCTGCCAAGAACACAACCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | AACGGAAGTCTTCTGGATAGAAGGTTGTGTTCTTGGCAGAGCCTCTaGATTGCGACACATGACTCCTGCTCATTGGCTACTATGAGATCT | + |
Preference number: 1 (lower is better) Translates to: NGSLLDRRLCSWQSL*IATHDSCSLATMRS Trigger: AGATCTCATAGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCCAGAGGCTCTGCCAAGAACACAACCTTCTATCCAGAAGACTTCCGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | TTTATTCTGCAGAAGACCAGCATGCGGGGGTCCTGTATTCCAAGATaGAGAGACAACCAAATGAGCTCACAGGTTGGACTGAAAGCACAT | + |
Preference number: 1 (lower is better) Translates to: FILQKTSMRGSCIPR*RDNQMSSQVGLKAH Trigger: ATGTGCTTTCAGTCCAACCTGTGAGCTCATTTGGTTGTCTCTCCATCTTGGAATACAGGACCCCCGCATGCTGGTCTTCTGCAGAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 90 bp | ATATTATTATGCTCACATTGTCTTAAGGATCTCCCATCCCCAGAATaGTTTCAGATCTCTCTCCCTGACAGTGCCCCAATGCTCTGGGTC | + |
Preference number: 1 (lower is better) Translates to: ILLCSHCLKDLPSPE*FQISLPDSAPMLWV Trigger: GACCCAGAGCATTGGGGCACTGTCAGGGAGAGAGATCTGAAAGCATTCTGGGGATGGGAGATCCTTAAGACAATGTGAGCATAATAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | CCATTGACTAGCATGAGCTTCCTGGAAAATTCTCATTTATCTGGCTaGGGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGT | + |
Preference number: 1 (lower is better) Translates to: PLTSMSFLENSHLSG*GLLFQHPDSRTERR Trigger: ACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACCCCAGCCAGATAAATGAGAATTTTCCAGGAAGCTCATGCTAGTCAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR TCA 90 bp | TCTTACTCCATCTCTAAGGGCATTCCATTAAAAGGGCATGGGAGCTaGAACCTGTTACCAGGAAGGTCTGGAAACTTGTTGGCCTTATTG | + |
Preference number: 1 (lower is better) Translates to: SYSISKGIPLKGHGS*NLLPGRSGNLLALL Trigger: CAATAAGGCCAACAAGTTTCCAGACCTTCCTGGTAACAGGTTTCAGCTCCCATGCCCTTTTAATGGAATGCCCTTAGAGATGGAGTAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | TTCTGGCTAACAAGCGGTTCTCCTGTGGTAGCTACTGGATACTCTTaGCTCAACTTTTTCATCCTTCATCAAGGAGACGTCTCTTTGCAA | + |
Preference number: 1 (lower is better) Translates to: FWLTSGSPVVATGYS*LNFFILHQGDVSLQ Trigger: TTGCAAAGAGACGTCTCCTTGATGAAGGATGAAAAAGTTGAGCCAAGAGTATCCAGTAGCTACCACAGGAGAACCGCTTGTTAGCCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | TTGCAGAAAACCACACTTATCAAATACAGGAAACAAGAGATCTTGTaGAGCCCAGTCGAAACAGGTATACCAGCAATAAAACTCGTGCAT | + |
Preference number: 1 (lower is better) Translates to: LQKTTLIKYRKQEIL*SPVETGIPAIKLVH Trigger: ATGCACGAGTTTTATTGCTGGTATACCTGTTTCGACTGGGCTCCACAAGATCTCTTGTTTCCTGTATTTGATAAGTGTGGTTTTCTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 90 bp | TCAACTTTTTCATCCTTCATCAAGGAGACGTCTCTTTGCAACCGATaGAGACCTTTGCAGAAAACCACACTTATCAAATACAGGAAACAA | + |
Preference number: 1 (lower is better) Translates to: STFSSFIKETSLCNR*RPLQKTTLIKYRKQ Trigger: TTGTTTCCTGTATTTGATAAGTGTGGTTTTCTGCAAAGGTCTCCATCGGTTGCAAAGAGACGTCTCCTTGATGAAGGATGAAAAAGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | CTTCCTGTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTTGAGGGGACCGGAGCTCTaGTCCAAGCCCGGTTCCCAG | + |
Preference number: 2 (lower is better) Translates to: LPVGAGELAPWVRCILLLRGPEL*SKPGSQ Trigger: CTGGGAACCGGGCTTGGAGCAGAGCTCCGGTCCCCT...CAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTACAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR TCA 90 bp | CAGCATGCGGGGGTCCTGTATTCCAAGATGGAGAGACAACCAAATGAGCTCACATTGTGCGTGGAATGCTaGGGACCCGGGGGCTGGGGC | + |
Preference number: 2 (lower is better) Translates to: QHAGVLYSKMERQPNELTLCVEC*GPGGWG Trigger: GCCCCAGCCCCCGGGTCCTCAGCATTCCACGCACAA...TGTGAGCTCATTTGGTTGTCTCTCCATCTTGGAATACAGGACCCCCGCATGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | GCCCCCTTCACCGCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTCGTGCATATCAGGGTTaGGGGTACTGCCTTCACTCT | + |
Preference number: 2 (lower is better) Translates to: APFTAFLPLQIVPSTPVSRAYQG*GYCLHS Trigger: AGAGTGAAGGCAGTACCCCCAACCCTGATATGCACG...AGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGGTGAAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | TCACCGCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTAGAGGAGACACACTCTaGAGACCAGGTGGGCAGCCC | + |
Preference number: 2 (lower is better) Translates to: SPPSFLCKLSLLLPCLMARGDTL*RPGGQP Trigger: GGGCTGCCCACCTGGTCTCCAGAGTGTGTCTCCTCT...AGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 90 bp | GTGCGCCTCTGCAAGTCTCTTCAGAGTGCCTGCATCACTGCCAGATaGCTGAAGAACTCCCACATGGACTGCACACACTGTCATGCAGGA | + |
Preference number: 2 (lower is better) Translates to: VRLCKSLQSACITAR*LKNSHMDCTHCHAG Trigger: TCCTGCATGACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGGCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 90 bp | TGCGCCCACTGCTCAGGACGTAACGGAAGTCTTCTGGATAGAAGGTaGTGTTCTTGGCAGAGCCTCTGGATTGCGACACATGACTCCTGC | + |
Preference number: 2 (lower is better) Translates to: CAHCSGRNGSLLDRR*CSWQSLWIATHDSC Trigger: GCAGGAGTCATGTGTCGCAATCCAGAGGCTCTGCCAAGAACACAACCTTCTATCCAGAAGACTTCCGTTACGTCCTGAGCAGTGGGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR TCA 90 bp | GAGCTAGTCCTTTGGGATATGAATGCTTCCTGTAGGAGCTGGAGAGTTGGCTCCGGCCTGTCTTCTTCTTaGGGACACGCCGAGAGGTCA | + |
Preference number: 2 (lower is better) Translates to: ELVLWDMNASCRSWRVGSGLSSS*GHAERS Trigger: TGACCTCTCGGCGTGTCCTCAAGAAGAAGACAGGCC...GGAGCCAACTCTCCAGCTCCTACAGGAAGCATTCATATCCCAAAGGACTAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR CCA 90 bp | GGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAAGGAGAGTTGGCTCCCTaGGTTAGGTGCATACTGCTC | + |
Preference number: 2 (lower is better) Translates to: GLLFQHPDSRTERRAPLQGELAP*VRCILL Trigger: GAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCC...TTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 90 bp | TCCATCCATCTTTGCGATCTAAGCACTTCAGGACTGTCACACTCTTaGCTCTTTTGTCCAACCTCCGGTCCCAGCTGCGCCCACTGCTCA | + |
Preference number: 2 (lower is better) Translates to: SIHLCDLSTSGLSHS*LFCPTSGPSCAHCS Trigger: TGAGCAGTGGGCGCAGCTGGGACCGGAGGTTGGACAAAAGAGCAAAGAGTGTGACAGTCCTGAAGTGCTTAGATCGCAAAGATGGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | GCCCCCTTCACCGCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTGGCACACATGGAAAATaGTCTTCAGGAATGCCTGTG | + |
Preference number: 2 (lower is better) Translates to: APFTAFLPLQIVPSTPVSGTHGK*SSGMPV Trigger: CACAGGCATTCCTGAAGAGCATTTTCCATGTGTGCC...AGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGGTGAAGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | ACTTCAGGACTGTCACACTCTTTGCTCTTTTGTCCAACCTCCGGTCCCAGCTGCCAGCCCACTGCATCTTaGTTCTGGCTAACAAGCGGT | + |
Preference number: 2 (lower is better) Translates to: TSGLSHSLLFCPTSGPSCQPTAS*FWLTSG Trigger: ACCGCTTGTTAGCCAGAAGCAAGATGCAGTGGGCTG...GCAGCTGGGACCGGAGGTTGGACAAAAGAGCAAAGAGTGTGACAGTCCTGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | ATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCAGCAATCCCTGGGAGGTTGCTTGTTGAGAGCGCCATaGTCCCTCCATCCATCTTTG | + |
Preference number: 2 (lower is better) Translates to: IYVRGFSPLWVQQSLGGCLLRAP*SLHPSL Trigger: CAAAGATGGATGGAGGGAGCATGGCGCTCTCAACAA...GCAACCTCCCAGGGATTGCTGGACCCACAGTGGGCTGAACCCTCTCACATAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | GAAGATGATGGAGGGCTTTCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTACTCTGGAGACCAGGTaGGCAGCCCACTGCATCTTG | + |
Preference number: 2 (lower is better) Translates to: EDDGGLSPSGIALAEGSCTLETR*AAHCIL Trigger: CAAGATGCAGTGGGCTGCCCACCTGGTCTCCAGAGT...ACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGAAAGCCCTCCATCATCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | GGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAAAACTCCCACATGGACTaGACACACTGTCATGCAGGA | + |
Preference number: 2 (lower is better) Translates to: GLLFQHPDSRTERRAPLQNSHMD*THCHAG Trigger: TCCTGCATGACAGTGTGTGCAGTCCATGTGGGAGTT...TTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR GCA 90 bp | TATCTAACTAGTCCTGGTCAAGATGTGGCCCTGCCCAGTATGGACCCAGCCTTGTCTCTTCAGAGTGCCTaGATCACTGCCAGATTGCTG | + |
Preference number: 2 (lower is better) Translates to: YLTSPGQDVALPSMDPALSLQSA*ITARLL Trigger: CAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGA...CAAGGCTGGGTCCATACTGGGCAGGGCCACATCTTGACCAGGACTAGTTAGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR GCA 90 bp | AGACCAGGTGGGCAGCCCACTGCATCTTGCTTCTGGCTAACAAGCGGTTCTCCTTTTCCAGGCAGCCACTaGTCTAGTTCACAGATTTCA | + |
Preference number: 2 (lower is better) Translates to: RPGGQPTASCFWLTSGSPFPGSH*SSSQIS Trigger: TGAAATCTGTGAACTAGAGCAGTGGCTGCCTGGAAA...AGGAGAACCGCTTGTTAGCCAGAAGCAAGATGCAGTGGGCTGCCCACCTGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | ATGATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCAGCAATCCCTGGGAGGTCCGCCTTCCTTCCTCTaGAAATTGTCCCTTCTACTC | + |
Preference number: 2 (lower is better) Translates to: MIYVRGFSPLWVQQSLGGPPSFL*KLSLLL Trigger: GAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGG...ACCTCCCAGGGATTGCTGGACCCACAGTGGGCTGAACCCTCTCACATAAATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | CTTCCTGTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTTGTTCAGGTGGAGAATCTaGCCTGTCTTCTTCTTGAGG | + |
Preference number: 2 (lower is better) Translates to: LPVGAGELAPWVRCILLLFRWRI*PVFFLR Trigger: CCTCAAGAAGAAGACAGGCCAGATTCTCCACCTGAA...CAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTACAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR GCA 90 bp | TGGGGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCTGCACACACTGTCATaGAGGAATTCCATTAGCCAA | + |
Preference number: 2 (lower is better) Translates to: WGLLFQHPDSRTERRAPLLHTLS*RNSISQ Trigger: TTGGCTAATGGAATTCCTGCATGACAGTGTGTGCAG...CAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR CCA 90 bp | GTTACACTCCGCGGCATTCACTGCTGTGGAGGGACTAGAAGTTTCCTGGAAGCTACTGCATCTTGCTTCTaGCTAACAAGCGGTTCTCCT | + |
Preference number: 2 (lower is better) Translates to: VTLRGIHCCGGTRSFLEATASCF*LTSGSP Trigger: AGGAGAACCGCTTGTTAGCCAGAAGCAAGATGCAGT...AGCTTCCAGGAAACTTCTAGTCCCTCCACAGCAGTGAATGCCGCGGAGTGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 90 bp | TGTTCTTGGCAGAGCCTCTGGATTGCGACACATGACTCCTGCTCATaGGCTACTATGAGATCTGCTTCCTTCAGAACAATCTCCCATGGC | + |
Preference number: 2 (lower is better) Translates to: CSWQSLWIATHDSCS*ATMRSASFRTISHG Trigger: GCCATGGGAGATTGTTCTGAAGGAAGCAGATCTCATAGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCCAGAGGCTCTGCCAAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | GTCCCTTCTACTCCCGTGTCTTATGGCTTGTTTTCTAATGCATGCTGGATATGGCTCCGCGGCATTCACTaGTGTGGAGGGACTAGAAGT | + |
Preference number: 2 (lower is better) Translates to: VPSTPVSYGLFSNACWIWLRGIH*CGGTRS Trigger: ACTTCTAGTCCCTCCACAGCAGTGAATGCCGCGGAG...CCATATCCAGCATGCATTAGAAAACAAGCCATAAGACACGGGAGTAGAAGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | ATGATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCAGCAATCCCTGGGAGGTGGACTAGAAGTTTCCTaGAAGCTGCTTGTCTTTGAC | + |
Preference number: 2 (lower is better) Translates to: MIYVRGFSPLWVQQSLGGGLEVS*KLLVFD Trigger: GTCAAAGACAAGCAGCTTCCAGGAAACTTCTAGTCC...ACCTCCCAGGGATTGCTGGACCCACAGTGGGCTGAACCCTCTCACATAAATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 90 bp | TGTCCTCACCAGGTTGGCCTTTGGGCAAGCTTGTGCTTCATTCTCTaGATTAATGATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCA | + |
Preference number: 2 (lower is better) Translates to: CPHQVGLWASLCFIL*INDLCERVQPTVGP Trigger: TGGACCCACAGTGGGCTGAACCCTCTCACATAAATCATTAATCAAGAGAATGAAGCACAAGCTTGCCCAAAGGCCAACCTGGTGAGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR TCA 90 bp | TCACCGCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTGCTCATTGGCTACTATaGGATCTGCTTCCTTCAGAA | + |
Preference number: 2 (lower is better) Translates to: SPPSFLCKLSLLLPCLMAAHWLL*DLLPSE Trigger: TTCTGAAGGAAGCAGATCTCATAGTAGCCAATGAGC...AGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | TCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTAGGTTGTTTCTGTTCCCTTCAGGAATGCCTGTGTaGTTCTTCAGCTTGTGCGTG | + |
Preference number: 2 (lower is better) Translates to: SPSGIALAEGSCRLFLFPSGMPV*FFSLCV Trigger: CACGCACAAGCTGAAGAACCACACAGGCATTCCTGA...AGGGAACAGAAACAACCTACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR GCA 90 bp | AGGGGATTCTGGGGTAGGTGGCCTTTATCTTACTCCATCTCTAAGGGCATTCCAAATGCTCTTCAGGAATaGCTGTGTGGTTCTTCAGCT | + |
Preference number: 2 (lower is better) Translates to: RGFWGRWPLSYSISKGIPNALQE*LCGSSA Trigger: AGCTGAAGAACCACACAGGCATTCCTGAAGAGCATT...TGGAATGCCCTTAGAGATGGAGTAAGATAAAGGCCACCTACCCCAGAATCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR CAA 90 bp | CACTGTCATGCAGGAATTCCATTAGCCAAGACCCCGGGGCAGAAGTaGGGTTTGCTTGTGTTTGTCTCAATAATTGACAATCTATTGGGC | + |
Preference number: 2 (lower is better) Translates to: HCHAGIPLAKTPGQK*GLLVFVSIIDNLLG Trigger: GCCCAATAGATTGTCAATTATTGAGACAAACACAAGCAAACCCAACTTCTGCCCCGGGGTCTTGGCTAATGGAATTCCTGCATGACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
3UTR-3UTR TCA 90 bp | CCACTTCTTCAGTCATCTATGATCACTGTGACCGGTGTTTCTGAGTTAAGACAGTGCCTTCACTCTCTCTaGGGCACACATGGAAAATGC | + |
Preference number: 2 (lower is better) Translates to: PLLQSSMITVTGVSELRQCLHSL*GTHGKC Trigger: GCATTTTCCATGTGTGCCTCAGAGAGAGTGAAGGCA...CTGTCTTAACTCAGAAACACCGGTCACAGTGATCATAGATGACTGAAGAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR-3UTR CCA 90 bp | TATCTAACTAGTCCTGGTCAAGATGTGGCCCTGCCCAGTATGGACCCAGCCTTGAAATTCTCATTTATCTaGCTGGGGTCTGTTGTTTCA | + |
Preference number: 2 (lower is better) Translates to: YLTSPGQDVALPSMDPALKFSFI*LGSVVS Trigger: TGAAACAACAGACCCCAGCCAGATAAATGAGAATTT...CAAGGCTGGGTCCATACTGGGCAGGGCCACATCTTGACCAGGACTAGTTAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
3UTR-3UTR CCA 90 bp | GCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTTGTTTTCTCTTTGCAACCGATaGAGACCTTTGCAGAAAACC | + |
Preference number: 2 (lower is better) Translates to: AFLPLQIVPSTPVSYGLFSLCNR*RPLQKT Trigger: GGTTTTCTGCAAAGGTCTCCATCGGTTGCAAAGAGA...AAACAAGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR-3UTR CCA 90 bp | CCACTTCTTCAGTCATCTATGATCACTGTGACCGGTGTTTCTGAGTTAAGACAGAGAAGGTTGTGTTCTTaGCAGAGCCTCTGGATTGCG | + |
Preference number: 2 (lower is better) Translates to: PLLQSSMITVTGVSELRQRRLCS*QSLWIA Trigger: CGCAATCCAGAGGCTCTGCCAAGAACACAACCTTCT...CTGTCTTAACTCAGAAACACCGGTCACAGTGATCATAGATGACTGAAGAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR-3UTR TCA 90 bp | AGGTGCCTGAAGCCTGGAATTTTAGCTGATGTGCCTGGACTTGCCCAGTTCTTAGTCTTTGACTTGTGTTaGAATGCTGAAGAAATGGGT | + |
Preference number: 2 (lower is better) Translates to: RCLKPGILADVPGLAQFLVFDLC*NAEEMG Trigger: ACCCATTTCTTCAGCATTTCAACACAAGTCAAAGAC...TAAGAACTGGGCAAGTCCAGGCACATCAGCTAAAATTCCAGGCTTCAGGCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR TCA 90 bp | GAAAACGGCATTACTCCATATTATTATGCTCACATTGTCTTAAGGATCTCCCATCTCTGGGTCCCTAGCTaGGGGACTCTGTTCTCAGTC | + |
Preference number: 2 (lower is better) Translates to: ENGITPYYYAHIVLRISHLWVPS*GTLFSV Trigger: GACTGAGAACAGAGTCCCTCAGCTAGGGACCCAGAG...ATGGGAGATCCTTAAGACAATGTGAGCATAATAATATGGAGTAATGCCGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR-3UTR GCA 90 bp | CCACTTCTTCAGTCATCTATGATCACTGTGACCGGTGTTTCTGAGTTAAGACAGGACTGTCACACTCTTTaGTCTTTTGTCCAACCTCCG | + |
Preference number: 2 (lower is better) Translates to: PLLQSSMITVTGVSELRQDCHTL*SFVQPP Trigger: CGGAGGTTGGACAAAAGAGCAAAGAGTGTGACAGTC...CTGTCTTAACTCAGAAACACCGGTCACAGTGATCATAGATGACTGAAGAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR-3UTR TCA 90 bp | GAAAACGGCATTACTCCATATTATTATGCTCACATTGTCTTAAGGATCTCCCATCTCAGTCCAGTTTGGTaGCCACAGTGCTCACCTCTC | + |
Preference number: 2 (lower is better) Translates to: ENGITPYYYAHIVLRISHLSPVW*PQCSPL Trigger: GAGAGGTGAGCACTGTGGTCACCAAACTGGACTGAG...ATGGGAGATCCTTAAGACAATGTGAGCATAATAATATGGAGTAATGCCGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR-3UTR CCA 90 bp | AGCGGTTCTCCTGTGGTAGCTACTGGATACTCTTGGCTCAACTTTTTCATCCTTTCTCTGAGGCACACATaGAAAATGCTCTTCAGGAAT | + |
Preference number: 2 (lower is better) Translates to: SGSPVVATGYSWLNFFILSLRHT*KMLFRN Trigger: ATTCCTGAAGAGCATTTTCCATGTGTGCCTCAGAGA...AAGGATGAAAAAGTTGAGCCAAGAGTATCCAGTAGCTACCACAGGAGAACCGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | GCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTTGTTTGTAACGGAAGTCTTCTaGATAGAAGGTTGTGTTCTT | + |
Preference number: 2 (lower is better) Translates to: AFLPLQIVPSTPVSYGLFVTEVF*IEGCVL Trigger: AAGAACACAACCTTCTATCCAGAAGACTTCCGTTAC...AAACAAGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CCA 90 bp | AGGTGCCTGAAGCCTGGAATTTTAGCTGATGTGCCTGGACTTGCCCAGTTCTTATTTTCTAATGCATGCTaGATATGGCGTAAAGCTACT | + |
Preference number: 2 (lower is better) Translates to: RCLKPGILADVPGLAQFLFSNAC*IWRKAT Trigger: AGTAGCTTTACGCCATATCCAGCATGCATTAGAAAA...TAAGAACTGGGCAAGTCCAGGCACATCAGCTAAAATTCCAGGCTTCAGGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 90 bp | GCCTTGTCTGGGCTTGAGTCTCATCCTGTACATTGGTCTTATGAGTaGTTAGATCTGTGTGAAATCTTTCTCCAAGAGATAAGTTTCCCC | + |
Preference number: 2 (lower is better) Translates to: ALSGLESHPVHWSYE*LDLCEIFLQEISFP Trigger: GGGGAAACTTATCTCTTGGAGAAAGATTTCACACAGATCTAACAACTCATAAGACCAATGTACAGGATGAGACTCAAGCCCAGACAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 90 bp | CCTTTGCAGAAAACCACACTTATCAAATACAGGAAACAAGAGATCTaGTGGAGCCCAGTCGAAACAGGTATACCAGCAATAAAACTCGTG | + |
Preference number: 2 (lower is better) Translates to: PLQKTTLIKYRKQEI*WSPVETGIPAIKLV Trigger: CACGAGTTTTATTGCTGGTATACCTGTTTCGACTGGGCTCCACAAGATCTCTTGTTTCCTGTATTTGATAAGTGTGGTTTTCTGCAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 90 bp | TCATCCTTCATCAAGGAGACGTCTCTTTGCAACCGATGGAGACCTTaGCAGAAAACCACACTTATCAAATACAGGAAACAAGAGATCTTG | + |
Preference number: 2 (lower is better) Translates to: SSFIKETSLCNRWRP*QKTTLIKYRKQEIL Trigger: CAAGATCTCTTGTTTCCTGTATTTGATAAGTGTGGTTTTCTGCAAAGGTCTCCATCGGTTGCAAAGAGACGTCTCCTTGATGAAGGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | TTAGGTGCATACTGCTCTTGCAGGGGACCGGAGCTCTaGTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCT | + |
Preference number: 3 (lower is better) Translates to: LGAYCSCRGPEL*SKPGSQLPGQP Trigger: AGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAGCTCCGGTCCCCTGCAAGAGCAGTATGCACCTAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR GCA 72 bp | GAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTaGTCTTGCAGGGGACCGGAGCTCTGCTCCAAGCCC | + |
Preference number: 3 (lower is better) Translates to: ELESWLPGLGAY*SCRGPELCSKP Trigger: GGGCTTGGAGCAGAGCTCCGGTCCCCTGCAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR GCA 72 bp | CCTGTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTaGATACTGCTCTTGCAGGGGACCGGAGCTCTGCTC | + |
Preference number: 3 (lower is better) Translates to: PVGAGELAPWVR*ILLLQGTGALL Trigger: GAGCAGAGCTCCGGTCCCCTGCAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CCA 72 bp | CTTCAGGAATGCCTGTGTGGTTCTTCAGCTTGTGCGTaGAATGCTGAGGACCCGGGGGCTGGGGCAGCAGGA | + |
Preference number: 3 (lower is better) Translates to: LQECLCGSSACA*NAEDPGAGAAG Trigger: TCCTGCTGCCCCAGCCCCCGGGTCCTCAGCATTCCACGCACAAGCTGAAGAACCACACAGGCATTCCTGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | ACACTCTGGAGACCAGGTGGGCAGCCCACTGCATCTTaGTTCTGGCTAACAAGCGGTTCTCCTGTGGTAGCT | + |
Preference number: 3 (lower is better) Translates to: TLWRPGGQPTAS*FWLTSGSPVVA Trigger: AGCTACCACAGGAGAACCGCTTGTTAGCCAGAAGCAAGATGCAGTGGGCTGCCCACCTGGTCTCCAGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | CACTCTTTGCTCTTTTGTCCAACCTCCGGTCCCAGCTaGGCCCACTGCTCAGGACGTAACGGAAGTCTTCTG | + |
Preference number: 3 (lower is better) Translates to: HSLLFCPTSGPS*AHCSGRNGSLL Trigger: CAGAAGACTTCCGTTACGTCCTGAGCAGTGGGCGCAGCTGGGACCGGAGGTTGGACAAAAGAGCAAAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | GCGCCTCTGCAAGTCTCTTCAGAGTGCCTGCATCACTaGCAGATTGCTGAAGAACTCCCACATGGACTGCAC | + |
Preference number: 3 (lower is better) Translates to: APLQVSSECLHH*QIAEELPHGLH Trigger: GTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR GCA 72 bp | AACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTaGAAGTCTCTTCAGAGTGCCTGCATCACTGCCAGA | + |
Preference number: 3 (lower is better) Translates to: NTLIVGLRDVRL*KSLQSACITAR Trigger: TCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CCA 72 bp | GCTGCGCCCACTGCTCAGGACGTAACGGAAGTCTTCTaGATAGAAGGTTGTGTTCTTGGCAGAGCCTCTGGA | + |
Preference number: 3 (lower is better) Translates to: AAPTAQDVTEVF*IEGCVLGRASG Trigger: TCCAGAGGCTCTGCCAAGAACACAACCTTCTATCCAGAAGACTTCCGTTACGTCCTGAGCAGTGGGCGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CAA 90 bp | CCTCTGCAAGTCTCTTCAGAGTGCCTGCATCACTGCCAGATTGCTGAAGAACTCTGGCCTGTCTTCTTCTaGAGGACACGCCGAGAGGTC | + |
Preference number: 3 (lower is better) Translates to: PLQVSSECLHHCQIAEELWPVFF*RTRREV Trigger: GACCTCTCGGCGTGTCCTCAAGAAGAAGACAGGCCA...GAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR TCA 72 bp | AGATCTTCAGGTGGAGAATCTGGCCTGTCTTCTTCTTaGGGACACGCCGAGAGGTCAGTACATGGGGGACAC | + |
Preference number: 3 (lower is better) Translates to: RSSGGESGLSSS*GHAERSVHGGH Trigger: GTGTCCCCCATGTACTGACCTCTCGGCGTGTCCTCAAGAAGAAGACAGGCCAGATTCTCCACCTGAAGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR GCA 72 bp | GCTGAAGAACTCCCACATGGACTGCACACACTGTCATaGAGGAATTCCATTAGCCAAGACCCCGGGGCAGAA | + |
Preference number: 3 (lower is better) Translates to: AEELPHGLHTLS*RNSISQDPGAE Trigger: TTCTGCCCCGGGGTCTTGGCTAATGGAATTCCTGCATGACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR GCA 72 bp | AGAGACGTGCGCCTCTGCAAGTCTCTTCAGAGTGCCTaGATCACTGCCAGATTGCTGAAGAACTCCCACATG | + |
Preference number: 3 (lower is better) Translates to: RDVRLCKSLQSA*ITARLLKNSHM Trigger: CATGTGGGAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGGCGCACGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR CAA 90 bp | TCACCGCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTCTTCTGGCTTCAGGTTaGTTGAGAGCGCCATGCTCC | + |
Preference number: 3 (lower is better) Translates to: SPPSFLCKLSLLLPCLMALLASG*LRAPCS Trigger: GGAGCATGGCGCTCTCAACAAACCTGAAGCCAGAAG...AGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | AGAAGAACAGGGTCTGTTACACTCCGCGGCATTCACTaGTGTGGAGGGACTAGAAGTTTCCTGGAAGCTGCT | + |
Preference number: 3 (lower is better) Translates to: RRTGSVTLRGIH*CGGTRSFLEAA Trigger: AGCAGCTTCCAGGAAACTTCTAGTCCCTCCACAGCAGTGAATGCCGCGGAGTGTAACAGACCCTGTTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 72 bp | CAGAAGACCAGCATGCGGGGGTCCTGTATTCCAAGATaGAGAGACAACCAAATGAGCTCACAGGTTGGACTG | + |
Preference number: 3 (lower is better) Translates to: QKTSMRGSCIPR*RDNQMSSQVGL Trigger: CAGTCCAACCTGTGAGCTCATTTGGTTGTCTCTCCATCTTGGAATACAGGACCCCCGCATGCTGGTCTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CAA 90 bp | GGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAATGCATCACTGCCAGATaGCTGAAGAACTCCCACATG | + |
Preference number: 3 (lower is better) Translates to: GLLFQHPDSRTERRAPLQCITAR*LKNSHM Trigger: CATGTGGGAGTTCTTCAGCAATCTGGCAGTGATGCA...TTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR CAA 90 bp | ATGATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCAGCAATCCCTGGGAGGTTCCTTCCTCTGCAAATaGTCCCTTCTACTCCCGTGT | + |
Preference number: 3 (lower is better) Translates to: MIYVRGFSPLWVQQSLGGSFLCK*SLLLPC Trigger: ACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGA...ACCTCCCAGGGATTGCTGGACCCACAGTGGGCTGAACCCTCTCACATAAATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CAA 90 bp | CAGCATGCGGGGGTCCTGTATTCCAAGATGGAGAGACAACCAAATGAGCTCACATATGTCCTCACCAGGTaGGCCTTTGGGCAAGCTTGT | + |
Preference number: 3 (lower is better) Translates to: QHAGVLYSKMERQPNELTYVLTR*AFGQAC Trigger: ACAAGCTTGCCCAAAGGCCAACCTGGTGAGGACATA...TGTGAGCTCATTTGGTTGTCTCTCCATCTTGGAATACAGGACCCCCGCATGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR TCA 72 bp | AGTCTCTTCAGAGTGCCTGCATCACTGCCAGATTGCTaGAGAACTCCCACATGGACTGCACACACTGTCATG | + |
Preference number: 3 (lower is better) Translates to: SLFRVPASLPDC*RTPTWTAHTVM Trigger: CATGACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR CAA 90 bp | AGGTGCCTGAAGCCTGGAATTTTAGCTGATGTGCCTGGACTTGCCCAGTTCTTATCCCTCCATCCATCTTaGCGATCTAAGCACTTCAGG | + |
Preference number: 3 (lower is better) Translates to: RCLKPGILADVPGLAQFLSLHPS*RSKHFR Trigger: CCTGAAGTGCTTAGATCGCAAAGATGGATGGAGGGA...TAAGAACTGGGCAAGTCCAGGCACATCAGCTAAAATTCCAGGCTTCAGGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR TCA 72 bp | CTTAGGCAATGTAATGGTGTATTTCGAAGGCCAAGCTaGGAGCCTACGTACCCAGTGGTCACTGGTGGGAAT | + |
Preference number: 3 (lower is better) Translates to: LRQCNGVFRRPS*EPTYPVVTGGN Trigger: ATTCCCACCAGTGACCACTGGGTACGTAGGCTCTCAGCTTGGCCTTCGAAATACACCATTACATTGCCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | TCTTGGCAGAGCCTCTGGATTGCGACACATGACTCCTaGTCATTGGCTACTATGAGATCTGCTTCCTTCAGA | + |
Preference number: 3 (lower is better) Translates to: SWQSLWIATHDS*SLATMRSASFR Trigger: TCTGAAGGAAGCAGATCTCATAGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCCAGAGGCTCTGCCAAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | TGCTCACATTGTCTTAAGGATCTCCCATCCCCAGAATaGTTTCAGATCTCTCTCCCTGACAGTGCCCCAATG | + |
Preference number: 3 (lower is better) Translates to: CSHCLKDLPSPE*FQISLPDSAPM Trigger: CATTGGGGCACTGTCAGGGAGAGAGATCTGAAAGCATTCTGGGGATGGGAGATCCTTAAGACAATGTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | CAGGAAGGTCTGGAAACTTGTTGGCCTTATTGTCCTTaGTTTAGGCTAGATGGCTGGGCGCCTTCTAGTTTC | + |
Preference number: 3 (lower is better) Translates to: QEGLETCWPYCP*FRLDGWAPSSF Trigger: GAAACTAGAAGGCGCCCAGCCATCTAGCCTAAAGCAAGGACAATAAGGCCAACAAGTTTCCAGACCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 72 bp | CTTCTGGATAGAAGGTTGTGTTCTTGGCAGAGCCTCTaGATTGCGACACATGACTCCTGCTCATTGGCTACT | + |
Preference number: 3 (lower is better) Translates to: LLDRRLCSWQSL*IATHDSCSLAT Trigger: AGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCCAGAGGCTCTGCCAAGAACACAACCTTCTATCCAGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CAA 90 bp | AGGGGATTCTGGGGTAGGTGGCCTTTATCTTACTCCATCTCTAAGGGCATTCCACATGACTCCTGCTCATaGGCTACTATGAGATCTGCT | + |
Preference number: 3 (lower is better) Translates to: RGFWGRWPLSYSISKGIPHDSCS*ATMRSA Trigger: AGCAGATCTCATAGTAGCCAATGAGCAGGAGTCATG...TGGAATGCCCTTAGAGATGGAGTAAGATAAAGGCCACCTACCCCAGAATCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR TCA 72 bp | GGATTGCGACACATGACTCCTGCTCATTGGCTACTATaGGATCTGCTTCCTTCAGAACAATCTCCCATGGCA | + |
Preference number: 3 (lower is better) Translates to: GLRHMTPAHWLL*DLLPSEQSPMA Trigger: TGCCATGGGAGATTGTTCTGAAGGAAGCAGATCTCATAGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR GCA 72 bp | ATCACTGCCAGATTGCTGAAGAACTCCCACATGGACTaGACACACTGTCATGCAGGAATTCCATTAGCCAAG | + |
Preference number: 3 (lower is better) Translates to: ITARLLKNSHMD*THCHAGIPLAK Trigger: CTTGGCTAATGGAATTCCTGCATGACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR-3UTR CAA 90 bp | AGGGGATTCTGGGGTAGGTGGCCTTTATCTTACTCCATCTCTAAGGGCATTCCAAACCGATGGAGACCTTaGCAGAAAACCACACTTATC | + |
Preference number: 3 (lower is better) Translates to: RGFWGRWPLSYSISKGIPNRWRP*QKTTLI Trigger: GATAAGTGTGGTTTTCTGCAAAGGTCTCCATCGGTT...TGGAATGCCCTTAGAGATGGAGTAAGATAAAGGCCACCTACCCCAGAATCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CAA 90 bp | AGGTGCCTGAAGCCTGGAATTTTAGCTGATGTGCCTGGACTTGCCCAGTTCTTATTTCCTGGAAGCTGCTaGTCTTTGACTTGTGTTGAA | + |
Preference number: 3 (lower is better) Translates to: RCLKPGILADVPGLAQFLFPGSC*SLTCVE Trigger: TTCAACACAAGTCAAAGACAAGCAGCTTCCAGGAAA...TAAGAACTGGGCAAGTCCAGGCACATCAGCTAAAATTCCAGGCTTCAGGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR-3UTR CAA 90 bp | CAGCATGCGGGGGTCCTGTATTCCAAGATGGAGAGACAACCAAATGAGCTCACATCGAGCTATAGTCATTaGAGAAAAGGAAATCTCAGC | + |
Preference number: 3 (lower is better) Translates to: QHAGVLYSKMERQPNELTSSYSH*RKGNLS Trigger: GCTGAGATTTCCTTTTCTCAAATGACTATAGCTCGA...TGTGAGCTCATTTGGTTGTCTCTCCATCTTGGAATACAGGACCCCCGCATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR TCA 72 bp | TCTTTGACTTGTGTTGAAATGCTGAAGAAATGGGTCTaGTGTCAGCAGAGGAGACACACTCTGGAGACCAGG | + |
Preference number: 3 (lower is better) Translates to: SLTCVEMLKKWV*CQQRRHTLETR Trigger: CCTGGTCTCCAGAGTGTGTCTCCTCTGCTGACATCAGACCCATTTCTTCAGCATTTCAACACAAGTCAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR CCA 72 bp | ACAAGCGGTTCTCCTGTGGTAGCTACTGGATACTCTTaGCTCAACTTTTTCATCCTTCATCAAGGAGACGTC | + |
Preference number: 3 (lower is better) Translates to: TSGSPVVATGYS*LNFFILHQGDV Trigger: GACGTCTCCTTGATGAAGGATGAAAAAGTTGAGCCAAGAGTATCCAGTAGCTACCACAGGAGAACCGCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR TCA 72 bp | AGGTTGGCCTTTGGGCAAGCTTGTGCTTCATTCTCTTaGTTAATGATTTATGTGAGAGGGTTCAGCCCACTG | + |
Preference number: 3 (lower is better) Translates to: RLAFGQACASFS*LMIYVRGFSPL Trigger: CAGTGGGCTGAACCCTCTCACATAAATCATTAATCAAGAGAATGAAGCACAAGCTTGCCCAAAGGCCAACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR TCA 72 bp | ATCTCTAAGGGCATTCCATTAAAAGGGCATGGGAGCTaGAACCTGTTACCAGGAAGGTCTGGAAACTTGTTG | + |
Preference number: 3 (lower is better) Translates to: ISKGIPLKGHGS*NLLPGRSGNLL Trigger: CAACAAGTTTCCAGACCTTCCTGGTAACAGGTTTCAGCTCCCATGCCCTTTTAATGGAATGCCCTTAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 72 bp | AGCATGAGCTTCCTGGAAAATTCTCATTTATCTGGCTaGGGTCTGTTGTTTCAACACCCTGATAGTCGGACT | + |
Preference number: 3 (lower is better) Translates to: SMSFLENSHLSG*GLLFQHPDSRT Trigger: AGTCCGACTATCAGGGTGTTGAAACAACAGACCCCAGCCAGATAAATGAGAATTTTCCAGGAAGCTCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR GCA 72 bp | ATATGTCCTCACCAGGTTGGCCTTTGGGCAAGCTTGTaGTTCATTCTCTTGATTAATGATTTATGTGAGAGG | + |
Preference number: 3 (lower is better) Translates to: ICPHQVGLWASL*FILLINDLCER Trigger: CCTCTCACATAAATCATTAATCAAGAGAATGAAGCACAAGCTTGCCCAAAGGCCAACCTGGTGAGGACATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CCA 72 bp | CCAGCCTTGTCTGGGCTTGAGTCTCATCCTGTACATTaGTCTTATGAGTTGTTAGATCTGTGTGAAATCTTT | + |
Preference number: 3 (lower is better) Translates to: PALSGLESHPVH*SYELLDLCEIF Trigger: AAAGATTTCACACAGATCTAACAACTCATAAGACCAATGTACAGGATGAGACTCAAGCCCAGACAAGGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR TCA 72 bp | GCAGAAGTTGGGTTTGCTTGTGTTTGTCTCAATAATTaGCAATCTATTGGGCTAGCAACACTGAAAGCAAGA | + |
Preference number: 3 (lower is better) Translates to: AEVGFACVCLNN*QSIGLATLKAR Trigger: TCTTGCTTTCAGTGTTGCTAGCCCAATAGATTGTCAATTATTGAGACAAACACAAGCAAACCCAACTTCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CCA 72 bp | ACCACACTTATCAAATACAGGAAACAAGAGATCTTGTaGAGCCCAGTCGAAACAGGTATACCAGCAATAAAA | + |
Preference number: 3 (lower is better) Translates to: TTLIKYRKQEIL*SPVETGIPAIK Trigger: TTTTATTGCTGGTATACCTGTTTCGACTGGGCTCCACAAGATCTCTTGTTTCCTGTATTTGATAAGTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | ACCGGAGCTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTGATGTGGAGAAGTGTTaGGATTGCGGCACCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: TGALLQARFPAPRSASRVDVEKC*DCGTRG Trigger: GCCCCTGGTGCCGCAATCCCAACACTTCTCCACATC...AACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAGCTCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | CTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTTAGATCTCTGGGGCTGCCTCCGTaGAACCATGGAGCTGGTGCT | + |
Preference number: 4 (lower is better) Translates to: LCSKPGSQLPGQPLAFRSLGLPP*NHGAGA Trigger: AGCACCAGCTCCATGGTTCCACGGAGGCAGCCCCAG...AGATCTAAACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | GGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTaGCAGGGGACCGGAGCTCTGCTCCAAGCCCGGTTC | + |
Preference number: 4 (lower is better) Translates to: GELAPWVRCILL*QGTGALLQARF Trigger: GAACCGGGCTTGGAGCAGAGCTCCGGTCCCCTGCAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | GCCCACTGTGGGTCCAGCAATCCCTGGGAGGTTGCCCTGGGTGGTAGCAGAAAGGATGTGGAGAAGTGTTaGGATTGCGGCACCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: AHCGSSNPWEVALGGSRKDVEKC*DCGTRG Trigger: GCCCCTGGTGCCGCAATCCCAACACTTCTCCACATC...CTTTCTGCTACCACCCAGGGCAACCTCCCAGGGATTGCTGGACCCACAGTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | CTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTTAGATCTGAGTGTACCAGGCAATaGCCTCACCATTGGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: LCSKPGSQLPGQPLAFRSECTRQ*PHHWAC Trigger: GCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTC...AGATCTAAACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR GCA 90 bp | CTGAGAGACGTGCGCCTCTGCAAGTCTCTTCAGAGTGCCTGCATCACTGCCAGAGAACCATGGAGCTGGTaGTCTGCTTTCCCAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: LRDVRLCKSLQSACITAREPWSW*SAFPGC Trigger: GCAGCCTGGGAAAGCAGAGCACCAGCTCCATGGTTC...TCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGGCGCACGTCTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | GGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAACTCACGTTCTCGGCTTaGGGTGTGTGGGCGGTGAGC | + |
Preference number: 4 (lower is better) Translates to: GLLFQHPDSRTERRAPLQLTFSA*GVWAVS Trigger: GCTCACCGCCCACACACCCCAAGCCGAGAACGTGAG...TTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | CACACTCTGGAGACCAGGTGGGCAGCCCACTGCATCTaGCTTCTGGCTAACAAGCGGTTCTCCTGTGGTAGC | + |
Preference number: 4 (lower is better) Translates to: HTLETRWAAHCI*LLANKRFSCGS Trigger: GCTACCACAGGAGAACCGCTTGTTAGCCAGAAGCAAGATGCAGTGGGCTGCCCACCTGGTCTCCAGAGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | GCCCACTGTGGGTCCAGCAATCCCTGGGAGGTTGCCCTGGGTGGTAGCAGAAAGTTTCATTGGAGGAGTTaGCAAGCCTCACAAAGAGGC | + |
Preference number: 4 (lower is better) Translates to: AHCGSSNPWEVALGGSRKFHWRS*QASQRG Trigger: GCCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAA...CTTTCTGCTACCACCCAGGGCAACCTCCCAGGGATTGCTGGACCCACAGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | CCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTTAGATCTTCAGGTGGAGAACAGGCTTGCTTCCAGTaGATAGGAGTGTACCAGGCA | + |
Preference number: 4 (lower is better) Translates to: PGSQLPGQPLAFRSSGGEQACFQ*IGVYQA Trigger: TGCCTGGTACACTCCTATCCACTGGAAGCAAGCCTG...TTCTCCACCTGAAGATCTAAACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | GGTCAAGATGTGGCCCTGCCCAGTATGGACCCAGCCTaGTCTGGGCTTGAGTCTCATCCTGTACATTGGTCT | + |
Preference number: 4 (lower is better) Translates to: GQDVALPSMDPA*SGLESHPVHWS Trigger: AGACCAATGTACAGGATGAGACTCAAGCCCAGACAAGGCTGGGTCCATACTGGGCAGGGCCACATCTTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | TCTAAGCACTTCAGGACTGTCACACTCTTTGCTCTTTaGTCCAACCTCCGGTCCCAGCTGCGCCCACTGCTC | + |
Preference number: 4 (lower is better) Translates to: SKHFRTVTLFAL*SNLRSQLRPLL Trigger: GAGCAGTGGGCGCAGCTGGGACCGGAGGTTGGACAAAAGAGCAAAGAGTGTGACAGTCCTGAAGTGCTTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR GCA 90 bp | GGTTTCAGTCTGACGTCATCACACATGCAGCACGCATGCTCCCCTCGTATCCACGAGAAGTGTTGGGATTaGGGCACCAGGGGCTCTTAT | + |
Preference number: 4 (lower is better) Translates to: GFSLTSSHMQHACSPRIHEKCWD*GTRGSY Trigger: ATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTC...GTGGATACGAGGGGAGCATGCGTGCTGCATGTGTGATGACGTCAGACTGAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | GCGGCATTCACTGCTGTGGAGGGACTAGAAGTTTCCTGGAAGCTGCTTGTCTTTGTCCGTTGGTGGCTGTaGCTTTGCTTCCGAAGCTGC | + |
Preference number: 4 (lower is better) Translates to: AAFTAVEGLEVSWKLLVFVRWWL*LCFRSC Trigger: GCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGAC...AAAGACAAGCAGCTTCCAGGAAACTTCTAGTCCCTCCACAGCAGTGAATGCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | ATGATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCAGCAATCCCTGGGAGGTGAGTGTACCAGGCAATaGCCTCACCATTGGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: MIYVRGFSPLWVQQSLGGECTRQ*PHHWAC Trigger: GCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTC...ACCTCCCAGGGATTGCTGGACCCACAGTGGGCTGAACCCTCTCACATAAATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | CCCAGCTCCCAGGTCAGCCTCTCGCGTTTAGATCTTCAGGTGGAGAATCTGGCCAATGTCCGAGTCATGTaGGTCAATCAGAGAGCTGTA | + |
Preference number: 4 (lower is better) Translates to: PSSQVSLSRLDLQVENLANVRVM*VNQRAV Trigger: TACAGCTCTCTGATTGACTCACATGACTCGGACATT...GGCCAGATTCTCCACCTGAAGATCTAAACGCGAGAGGCTGACCTGGGAGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | GGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAACAATGGCCTCACCATTaGGCTTGCACAAGATGGTCG | + |
Preference number: 4 (lower is better) Translates to: GLLFQHPDSRTERRAPLQQWPHH*ACTRWS Trigger: CGACCATCTTGTGCAAGCCCAATGGTGAGGCCATTG...TTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | GGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAATGGTTTGGGCTTGGTTaGCTGAGGCTTGAGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: GLLFQHPDSRTERRAPLQWFGLG*LRLELC Trigger: ACACAGCTCAAGCCTCAGCCAACCAAGCCCAAACCA...TTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | TGGCCCTGCCCAGTATGGACCCAGCCTTGTCTGGGCTaGAGTCTCATCCTGTACATTGGTCTTATGAGTTGT | + |
Preference number: 4 (lower is better) Translates to: WPCPVWTQPCLG*SLILYIGLMSC Trigger: ACAACTCATAAGACCAATGTACAGGATGAGACTCAAGCCCAGACAAGGCTGGGTCCATACTGGGCAGGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | TCCACGCCCCCTTCACCGCCTTCCTTCCTCTGCAAATaGTCCCTTCTACTCCCGTGTCTTATGGCTTGTTTT | + |
Preference number: 4 (lower is better) Translates to: STPPSPPSFLCK*SLLLPCLMACF Trigger: AAAACAAGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGGTGAAGGGGGCGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | CTTCCTGTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTTGTTTCATTGGAGGAGTTaGCAAGCCTCACAAAGAGGC | + |
Preference number: 4 (lower is better) Translates to: LPVGAGELAPWVRCILLLFHWRS*QASQRG Trigger: GCCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAA...CAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTACAGGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR GCA 90 bp | ATCACTGCCAGATTGCTGAAGAACTCCCACATGGACTGCACACACTGTCATGCAATGGAGCTGGTGCTCTaGTTTCCCAGGCTGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: ITARLLKNSHMDCTHCHAMELVL*FPRLLS Trigger: AGACAGCAGCCTGGGAAAGCAGAGCACCAGCTCCAT...TGCATGACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCAGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR GCA 90 bp | CCTCTGCAAGTCTCTTCAGAGTGCCTGCATCACTGCCAGATTGCTGAAGAACTCGAGAAGTGTTGGGATTaGGGCACCAGGGGCTCTTAT | + |
Preference number: 4 (lower is better) Translates to: PLQVSSECLHHCQIAEELEKCWD*GTRGSY Trigger: ATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTC...GAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | GATCTGTGTGAAATCTTTCTCCAAGAGATAAGTTTCCCCTCTGGCTGGTGCCGGAGGCTGCTGTCTTTGTaGGAGCAGCTCAGGATGGTG | + |
Preference number: 4 (lower is better) Translates to: DLCEIFLQEISFPSGWCRRLLSL*EQLRMV Trigger: CACCATCCTGAGCTGCTCCCACAAAGACAGCAGCCT...CCGGCACCAGCCAGAGGGGAAACTTATCTCTTGGAGAAAGATTTCACACAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | CTCATTTATCTGGCTGGGGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGTCCGTTGGTGGCTGTaGCTTTGCTTCCGAAGCTGC | + |
Preference number: 4 (lower is better) Translates to: LIYLAGVCCFNTLIVGLRVRWWL*LCFRSC Trigger: GCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGAC...TCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACCCCAGCCAGATAAATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | TATCTAACTAGTCCTGGTCAAGATGTGGCCCTGCCCAGTATGGACCCAGCCTTGCCAAACAAAGTCCGTTaGTGGCTGTGGCTTTGCTTC | + |
Preference number: 4 (lower is better) Translates to: YLTSPGQDVALPSMDPALPNKVR*WLWLCF Trigger: GAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGG...CAAGGCTGGGTCCATACTGGGCAGGGCCACATCTTGACCAGGACTAGTTAGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | GTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTTGCAGGGGATCCATCCAAACATGTaGTTTCTCATTGATGGGACC | + |
Preference number: 4 (lower is better) Translates to: VGAGELAPWVRCILLLQGIHPNM*FLIDGT Trigger: GGTCCCATCAATGAGAAACCACATGTTTGGATGGAT...CCCCTGCAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR TCA 90 bp | GTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTTGCAGGGGTCACAAAGAGGCCCTTaGTATTTACCTCAGCTATTT | + |
Preference number: 4 (lower is better) Translates to: VGAGELAPWVRCILLLQGSQRGP*YLPQLF Trigger: AAATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGA...CCCCTGCAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR TCA 90 bp | TGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAAGTCTTGGTTGGCTGAGGCTTaGGCTGTGTATCTAAACTGC | + |
Preference number: 4 (lower is better) Translates to: CCFNTLIVGLRDVRLCKSWLAEA*AVYLNC Trigger: GCAGTTTAGATACACAGCTCAAGCCTCAGCCAACCA...AGACTTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | TGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAAGTCTAACAAAGTCCGTTGGTaGCTGTGGCTTTGCTTCCGA | + |
Preference number: 4 (lower is better) Translates to: CCFNTLIVGLRDVRLCKSNKVRW*LWLCFR Trigger: TCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTT...AGACTTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | TCACCGCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTAACAAAGTCCGTTGGTaGCTGTGGCTTTGCTTCCGA | + |
Preference number: 4 (lower is better) Translates to: SPPSFLCKLSLLLPCLMANKVRW*LWLCFR Trigger: TCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTT...AGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGCGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | GAAGATGATGGAGGGCTTTCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTCAGGCTTGCTTCCAGTaGATAGGAGTGTACCAGGCA | + |
Preference number: 4 (lower is better) Translates to: EDDGGLSPSGIALAEGSCQACFQ*IGVYQA Trigger: TGCCTGGTACACTCCTATCCACTGGAAGCAAGCCTG...ACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGAAAGCCCTCCATCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | GAAGATGATGGAGGGCTTTCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTTGGTTTGGGCTTGGTTaGCTGAGGCTTGAGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: EDDGGLSPSGIALAEGSCWFGLG*LRLELC Trigger: ACACAGCTCAAGCCTCAGCCAACCAAGCCCAAACCA...ACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGAAAGCCCTCCATCATCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 72 bp | TGCAAGTCTCTTCAGAGTGCCTGCATCACTGCCAGATaGCTGAAGAACTCCCACATGGACTGCACACACTGT | + |
Preference number: 4 (lower is better) Translates to: CKSLQSACITAR*LKNSHMDCTHC Trigger: ACAGTGTGTGCAGTCCATGTGGGAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | GTAGGTTGTTTCTGTTCCCTTCTGGCTTCAGGTTTGTaGAGAGCGCCATGCTCCCTCCATCCATCTTTGCGA | + |
Preference number: 4 (lower is better) Translates to: VGCFCSLLASGL*RAPCSLHPSLR Trigger: TCGCAAAGATGGATGGAGGGAGCATGGCGCTCTCAACAAACCTGAAGCCAGAAGGGAACAGAAACAACCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 72 bp | GGGTCCCTAGCTGAGGGACTCTGTTCTCAGTCCAGTTaGGTGACCACAGTGCTCACCTCTCTTATTTTCTCA | + |
Preference number: 4 (lower is better) Translates to: GSLAEGLCSQSS*VTTVLTSLIFS Trigger: TGAGAAAATAAGAGAGGTGAGCACTGTGGTCACCAAACTGGACTGAGAACAGAGTCCCTCAGCTAGGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | GACACACTCTGGAGACCAGGTGGGCAGCCCACTGCATCTTGCTTCTGGCTAACATCACAAAGAGGCCCTTaGTATTTACCTCAGCTATTT | + |
Preference number: 4 (lower is better) Translates to: DTLWRPGGQPTASCFWLTSQRGP*YLPQLF Trigger: AAATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGA...TGTTAGCCAGAAGCAAGATGCAGTGGGCTGCCCACCTGGTCTCCAGAGTGTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | AGGTGCCTGAAGCCTGGAATTTTAGCTGATGTGCCTGGACTTGCCCAGTTCTTATGGTTGGCTGAGGCTTaGGCTGTGTATCTAAACTGC | + |
Preference number: 4 (lower is better) Translates to: RCLKPGILADVPGLAQFLWLAEA*AVYLNC Trigger: GCAGTTTAGATACACAGCTCAAGCCTCAGCCAACCA...TAAGAACTGGGCAAGTCCAGGCACATCAGCTAAAATTCCAGGCTTCAGGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR GCA 90 bp | GCTACTATGAGATCTGCTTCCTTCAGAACAATCTCCCATGGCAAGCTTAGTCATCACTGCTGCTTGCTGTaGAGGGGTCCTGGGATACCT | + |
Preference number: 4 (lower is better) Translates to: ATMRSASFRTISHGKLSHHCCLL*RGPGIP Trigger: AGGTATCCCAGGACCCCTGCACAGCAAGCAGCAGTG...ATGACTAAGCTTGCCATGGGAGATTGTTCTGAAGGAAGCAGATCTCATAGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | TTAGATCTGTGTGAAATCTTTCTCCAAGAGATAAGTTTCCCCTCTGGCTGGTGCGCCTCCGTGGAACCATaGAGCTGGTGCTCTGCTTTC | + |
Preference number: 4 (lower is better) Translates to: LDLCEIFLQEISFPSGWCASVEP*SWCSAF Trigger: GAAAGCAGAGCACCAGCTCCATGGTTCCACGGAGGC...GCACCAGCCAGAGGGGAAACTTATCTCTTGGAGAAAGATTTCACACAGATCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | GAAGATGATGGAGGGCTTTCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTCCAAACAAAGTCCGTTaGTGGCTGTGGCTTTGCTTC | + |
Preference number: 4 (lower is better) Translates to: EDDGGLSPSGIALAEGSCPNKVR*WLWLCF Trigger: GAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGG...ACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGAAAGCCCTCCATCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | TCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTAGGTTGTTTCTGTTCCCTCAATGGCCTCACCATTaGGCTTGCACAAGATGGTCG | + |
Preference number: 4 (lower is better) Translates to: SPSGIALAEGSCRLFLFPQWPHH*ACTRWS Trigger: CGACCATCTTGTGCAAGCCCAATGGTGAGGCCATTG...AGGGAACAGAAACAACCTACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | CTTCCTGTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTTGCTTTCTCCTCGTTTGTaGAAGAGACAGATGCTGTTA | + |
Preference number: 4 (lower is better) Translates to: LPVGAGELAPWVRCILLLLSPRL*KRQMLL Trigger: TAACAGCATCTGTCTCTTCCACAAACGAGGAGAAAG...CAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTACAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
CDS-3UTR CCA 90 bp | CTTCCTGTAGGAGCTGGAGAGTTGGCTCCCTGGGTTAGGTGCATACTGCTCTTGGGGCGTTTTCTGTATTaGTTCTTCTTTCTCCTCGTT | + |
Preference number: 4 (lower is better) Translates to: LPVGAGELAPWVRCILLLGRFLY*FFFLLV Trigger: AACGAGGAGAAAGAAGAACCAATACAGAAAACGCCC...CAAGAGCAGTATGCACCTAACCCAGGGAGCCAACTCTCCAGCTCCTACAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
3UTR CAA 72 bp | TGCTCAGGACGTAACGGAAGTCTTCTGGATAGAAGGTaGTGTTCTTGGCAGAGCCTCTGGATTGCGACACAT | + |
Preference number: 4 (lower is better) Translates to: CSGRNGSLLDRR*CSWQSLWIATH Trigger: ATGTGTCGCAATCCAGAGGCTCTGCCAAGAACACAACCTTCTATCCAGAAGACTTCCGTTACGTCCTGAGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR CAA 72 bp | GTTGTAGGTTGTTTCTGTTCCCTTCTGGCTTCAGGTTaGTTGAGAGCGCCATGCTCCCTCCATCCATCTTTG | + |
Preference number: 4 (lower is better) Translates to: VVGCFCSLLASG*LRAPCSLHPSL Trigger: CAAAGATGGATGGAGGGAGCATGGCGCTCTCAACAAACCTGAAGCCAGAAGGGAACAGAAACAACCTACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | GAAGATGATGGAGGGCTTTCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTTTTCTCCGAGAGAACTaGGAATTCCTCCTTTTGGGC | + |
Preference number: 4 (lower is better) Translates to: EDDGGLSPSGIALAEGSCFLREN*EFLLLG Trigger: GCCCAAAAGGAGGAATTCTCAGTTCTCTCGGAGAAA...ACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGAAAGCCCTCCATCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
3UTR CAA 72 bp | CAGAGCCTCTGGATTGCGACACATGACTCCTGCTCATaGGCTACTATGAGATCTGCTTCCTTCAGAACAATC | + |
Preference number: 4 (lower is better) Translates to: QSLWIATHDSCS*ATMRSASFRTI Trigger: GATTGTTCTGAAGGAAGCAGATCTCATAGTAGCCAATGAGCAGGAGTCATGTGTCGCAATCCAGAGGCTCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR GCA 90 bp | CACTGTCATGCAGGAATTCCATTAGCCAAGACCCCGGGGCAGAAGTTGGGTTTGTGTGGAAGAGACAGATaGTGTTATCCATCCAAACAT | + |
Preference number: 4 (lower is better) Translates to: HCHAGIPLAKTPGQKLGLCGRDR*CYPSKH Trigger: ATGTTTGGATGGATAACAGCATCTGTCTCTTCCACA...CAAACCCAACTTCTGCCCCGGGGTCTTGGCTAATGGAATTCCTGCATGACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
CDS-3UTR CCA 90 bp | TGGAAAATTCTCATTTATCTGGCTGGGGTCTGTTGTTTCAACACCCTGATAGTCCTCTGGACGATAAGGTaGAGCTGTTCTGGGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: WKILIYLAGVCCFNTLIVLWTIR*SCSGCW Trigger: CCAGCACCCAGAACAGCTCCACCTTATCGTCCAGAG...GACTATCAGGGTGTTGAAACAACAGACCCCAGCCAGATAAATGAGAATTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTCTGGGGCTGCCTCCGTaGAACCATGGAGCTGGTGCT | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICLGLPP*NHGAGA Trigger: AGCACCAGCTCCATGGTTCCACGGAGGCAGCCCCAG...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GATCTGTGTGAAATCTTTCTCCAAGAGATAAGTTTCCCCTCTGGCTGGTGCCGGTTGCTTTCTTTTTCTTaGTCCCTGGGTCTGGTTTGG | + |
Preference number: 4 (lower is better) Translates to: DLCEIFLQEISFPSGWCRLLSFS*SLGLVW Trigger: CCAAACCAGACCCAGGGACCAAGAAAAAGAAAGCAA...CCGGCACCAGCCAGAGGGGAAACTTATCTCTTGGAGAAAGATTTCACACAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR TCA 90 bp | ACCCCGGGGCAGAAGTTGGGTTTGCTTGTGTTTGTCTCAATAATTGACAATCTACATTTCTTGGGAAAATaGGCGGGACAACGGGATGAG | + |
Preference number: 4 (lower is better) Translates to: TPGQKLGLLVFVSIIDNLHFLGK*AGQRDE Trigger: CTCATCCCGTTGTCCCGCTCATTTTCCCAAGAAATG...TAGATTGTCAATTATTGAGACAAACACAAGCAAACCCAACTTCTGCCCCGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
CDS-3UTR GCA 90 bp | ACCCCGGGGCAGAAGTTGGGTTTGCTTGTGTTTGTCTCAATAATTGACAATCTAAACTTCTCCCAGGCTTaGTTCCAGTGGATAGGAGTG | + |
Preference number: 4 (lower is better) Translates to: TPGQKLGLLVFVSIIDNLNFSQA*FQWIGV Trigger: CACTCCTATCCACTGGAAGCAAGCCTGGGAGAAGTT...TAGATTGTCAATTATTGAGACAAACACAAGCAAACCCAACTTCTGCCCCGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACTCACGTTCTCGGCTTaGGGTGTGTGGGCGGTGAGC | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGILTFSA*GVWAVS Trigger: GCTCACCGCCCACACACCCCAAGCCGAGAACGTGAG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | AGGGGATTCTGGGGTAGGTGGCCTTTATCTTACTCCATCTCTAAGGGCATTCCAGGGCGTTTTCTGTATTaGTTCTTCTTTCTCCTCGTT | + |
Preference number: 4 (lower is better) Translates to: RGFWGRWPLSYSISKGIPGRFLY*FFFLLV Trigger: AACGAGGAGAAAGAAGAACCAATACAGAAAACGCCC...TGGAATGCCCTTAGAGATGGAGTAAGATAAAGGCCACCTACCCCAGAATCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | TCTTTGCGATCTAAGCACTTCAGGACTGTCACACTCTTTGCTCTTTTGTCCAACCTTTTTCTTGGTCCCTaGGTCTGGTTTGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: SLRSKHFRTVTLFALLSNLFLGP*VWFGLG Trigger: ACCAAGCCCAAACCAGACCCAGGGACCAAGAAAAAG...GTTGGACAAAAGAGCAAAGAGTGTGACAGTCCTGAAGTGCTTAGATCGCAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR GCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGAACCATGGAGCTGGTaGTCTGCTTTCCCAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICEPWSW*SAFPGC Trigger: GCAGCCTGGGAAAGCAGAGCACCAGCTCCATGGTTC...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR GCA 90 bp | GAAGATGATGGAGGGCTTTCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTTGTGGAAGAGACAGATaGTGTTATCCATCCAAACAT | + |
Preference number: 4 (lower is better) Translates to: EDDGGLSPSGIALAEGSCCGRDR*CYPSKH Trigger: ATGTTTGGATGGATAACAGCATCTGTCTCTTCCACA...ACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGAAAGCCCTCCATCATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGTCCGTTGGTGGCTGTaGCTTTGCTTCCGAAGCTGC | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICVRWWL*LCFRSC Trigger: GCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGAC...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTTGTTTATCCATCCAAACATGTaGTTTCTCATTGATGGGACC | + |
Preference number: 4 (lower is better) Translates to: AFLPLQIVPSTPVSYGLFIHPNM*FLIDGT Trigger: GGTCCCATCAATGAGAAACCACATGTTTGGATGGAT...AAACAAGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | TCCCCTTCGGGAATTGCATTAGCAGAAGGCAGTTGTAGGTTGTTTCTGTTCCCTCTTTCTCCTCGTTTGTaGAAGAGACAGATGCTGTTA | + |
Preference number: 4 (lower is better) Translates to: SPSGIALAEGSCRLFLFPLSPRL*KRQMLL Trigger: TAACAGCATCTGTCTCTTCCACAAACGAGGAGAAAG...AGGGAACAGAAACAACCTACAACTGCCTTCTGCTAATGCAATTCCCGAAGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGATGTGGAGAAGTGTTaGGATTGCGGCACCAGGGGC | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICDVEKC*DCGTRG Trigger: GCCCCTGGTGCCGCAATCCCAACACTTCTCCACATC...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | TTGACAATCTATTGGGCTAGCAACACTGAAAGCAAGACCTGGATTCTTGCAGTACTTTTTCTTGGTCCCTaGGTCTGGTTTGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: LTIYWASNTESKTWILAVLFLGP*VWFGLG Trigger: ACCAAGCCCAAACCAGACCCAGGGACCAAGAAAAAG...TACTGCAAGAATCCAGGTCTTGCTTTCAGTGTTGCTAGCCCAATAGATTGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CCA 90 bp | AGCGGTTCTCCTGTGGTAGCTACTGGATACTCTTGGCTCAACTTTTTCATCCTTTTGCTTTCTTTTTCTTaGTCCCTGGGTCTGGTTTGG | + |
Preference number: 4 (lower is better) Translates to: SGSPVVATGYSWLNFFILLLSFS*SLGLVW Trigger: CCAAACCAGACCCAGGGACCAAGAAAAAGAAAGCAA...AAGGATGAAAAAGTTGAGCCAAGAGTATCCAGTAGCTACCACAGGAGAACCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 72 bp | GCAGGAATTCCATTAGCCAAGACCCCGGGGCAGAAGTaGGGTTTGCTTGTGTTTGTCTCAATAATTGACAAT | + |
Preference number: 4 (lower is better) Translates to: AGIPLAKTPGQK*GLLVFVSIIDN Trigger: ATTGTCAATTATTGAGACAAACACAAGCAAACCCAACTTCTGCCCCGGGGTCTTGGCTAATGGAATTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | AGAGATAAGTTTCCCCTCTGGCTGGTGCCGGTTCCATaGACTAGCATGAGCTTCCTGGAAAATTCTCATTTA | + |
Preference number: 4 (lower is better) Translates to: RDKFPLWLVPVP*TSMSFLENSHL Trigger: TAAATGAGAATTTTCCAGGAAGCTCATGCTAGTCAATGGAACCGGCACCAGCCAGAGGGGAAACTTATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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3UTR CAA 72 bp | AACAAGCGGTTCTCCTGTGGTAGCTACTGGATACTCTaGGCTCAACTTTTTCATCCTTCATCAAGGAGACGT | + |
Preference number: 4 (lower is better) Translates to: NKRFSCGSYWIL*AQLFHPSSRRR Trigger: ACGTCTCCTTGATGAAGGATGAAAAAGTTGAGCCAAGAGTATCCAGTAGCTACCACAGGAGAACCGCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 72 bp | CAGGTTGGCCTTTGGGCAAGCTTGTGCTTCATTCTCTaGATTAATGATTTATGTGAGAGGGTTCAGCCCACT | + |
Preference number: 4 (lower is better) Translates to: QVGLWASLCFIL*INDLCERVQPT Trigger: AGTGGGCTGAACCCTCTCACATAAATCATTAATCAAGAGAATGAAGCACAAGCTTGCCCAAAGGCCAACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | CCACTTCTTCAGTCATCTATGATCACTGTGACCGGTGTTTCTGAGTTAAGACAGAATGTCCGAGTCATGTaGGTCAATCAGAGAGCTGTA | + |
Preference number: 4 (lower is better) Translates to: PLLQSSMITVTGVSELRQNVRVM*VNQRAV Trigger: TACAGCTCTCTGATTGACTCACATGACTCGGACATT...CTGTCTTAACTCAGAAACACCGGTCACAGTGATCATAGATGACTGAAGAAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR GCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTATGGAGCTGGTGCTCTaGTTTCCCAGGCTGCTGTCT | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICMELVL*FPRLLS Trigger: AGACAGCAGCCTGGGAAAGCAGAGCACCAGCTCCAT...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTCTCTGGACGATAAGGTaGAGCTGTTCTGGGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICLWTIR*SCSGCW Trigger: CCAGCACCCAGAACAGCTCCACCTTATCGTCCAGAG...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTAGGCTGCTGTCTTTGTaGGAGCAGCTCAGGATGGTG | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICRLLSL*EQLRMV Trigger: CACCATCCTGAGCTGCTCCCACAAAGACAGCAGCCT...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR GCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGAGAAGTGTTGGGATTaGGGCACCAGGGGCTCTTAT | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICEKCWD*GTRGSY Trigger: ATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTC...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATAGAGTGTACCAGGCAATaGCCTCACCATTGGGCTTGC | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGIECTRQ*PHHWAC Trigger: GCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTC...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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3UTR CAA 72 bp | ATTCCATTAGCCAAGACCCCGGGGCAGAAGTTGGGTTaGCTTGTGTTTGTCTCAATAATTGACAATCTATTG | + |
Preference number: 4 (lower is better) Translates to: IPLAKTPGQKLG*LVFVSIIDNLL Trigger: CAATAGATTGTCAATTATTGAGACAAACACAAGCAAACCCAACTTCTGCCCCGGGGTCTTGGCTAATGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR TCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTCATTTCTTGGGAAAATaGGCGGGACAACGGGATGAG | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICHFLGK*AGQRDE Trigger: CTCATCCCGTTGTCCCGCTCATTTTCCCAAGAAATG...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR TCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTTGGTTGGCTGAGGCTTaGGCTGTGTATCTAAACTGC | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICWLAEA*AVYLNC Trigger: GCAGTTTAGATACACAGCTCAAGCCTCAGCCAACCA...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACAATGGCCTCACCATTaGGCTTGCACAAGATGGTCG | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGIQWPHH*ACTRWS Trigger: CGACCATCTTGTGCAAGCCCAATGGTGAGGCCATTG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACAGGCTTGCTTCCAGTaGATAGGAGTGTACCAGGCA | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGIQACFQ*IGVYQA Trigger: TGCCTGGTACACTCCTATCCACTGGAAGCAAGCCTG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATATGGTTTGGGCTTGGTTaGCTGAGGCTTGAGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGIWFGLG*LRLELC Trigger: ACACAGCTCAAGCCTCAGCCAACCAAGCCCAAACCA...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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3UTR CAA 72 bp | ATCAAGGAGACGTCTCTTTGCAACCGATGGAGACCTTaGCAGAAAACCACACTTATCAAATACAGGAAACAA | + |
Preference number: 4 (lower is better) Translates to: IKETSLCNRWRP*QKTTLIKYRKQ Trigger: TTGTTTCCTGTATTTGATAAGTGTGGTTTTCTGCAAAGGTCTCCATCGGTTGCAAAGAGACGTCTCCTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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3UTR CAA 72 bp | AAGATATGTCCTCACCAGGTTGGCCTTTGGGCAAGCTaGTGCTTCATTCTCTTGATTAATGATTTATGTGAG | + |
Preference number: 4 (lower is better) Translates to: KICPHQVGLWAS*CFILLINDLCE Trigger: CTCACATAAATCATTAATCAAGAGAATGAAGCACAAGCTTGCCCAAAGGCCAACCTGGTGAGGACATATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGAGCGTGGTGGAGTCTaGATCCATTATCTTTGGGAA | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICERGGV*IHYLWE Trigger: TTCCCAAAGATAATGGATTCAGACTCCACCACGCTC...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATAAACAAAGTCCGTTGGTaGCTGTGGCTTTGCTTCCGA | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGINKVRW*LWLCFR Trigger: TCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTT...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACCAAACAAAGTCCGTTaGTGGCTGTGGCTTTGCTTC | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGIPNKVR*WLWLCF Trigger: GAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACTTTTTCTTGGTCCCTaGGTCTGGTTTGGGCTTGGT | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGILFLGP*VWFGLG Trigger: ACCAAGCCCAAACCAGACCCAGGGACCAAGAAAAAG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR TCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATATTTCATTGGAGGAGTTaGCAAGCCTCACAAAGAGGC | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGIFHWRS*QASQRG Trigger: GCCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAA...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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3UTR CAA 72 bp | GGGCTTGAGTCTCATCCTGTACATTGGTCTTATGAGTaGTTAGATCTGTGTGAAATCTTTCTCCAAGAGATA | + |
Preference number: 4 (lower is better) Translates to: GLESHPVHWSYE*LDLCEIFLQEI Trigger: TATCTCTTGGAGAAAGATTTCACACAGATCTAACAACTCATAAGACCAATGTACAGGATGAGACTCAAGCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
||
3UTR CAA 72 bp | AAAACCACACTTATCAAATACAGGAAACAAGAGATCTaGTGGAGCCCAGTCGAAACAGGTATACCAGCAATA | + |
Preference number: 4 (lower is better) Translates to: KTTLIKYRKQEI*WSPVETGIPAI Trigger: TATTGCTGGTATACCTGTTTCGACTGGGCTCCACAAGATCTCTTGTTTCCTGTATTTGATAAGTGTGGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR TCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATAAATGTCCGAGTCATGTaGGTCAATCAGAGAGCTGTA | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGINVRVM*VNQRAV Trigger: TACAGCTCTCTGATTGACTCACATGACTCGGACATT...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTATCCATCCAAACATGTaGTTTCTCATTGATGGGACC | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICIHPNM*FLIDGT Trigger: GGTCCCATCAATGAGAAACCACATGTTTGGATGGAT...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTCTTTCTCCTCGTTTGTaGAAGAGACAGATGCTGTTA | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICLSPRL*KRQMLL Trigger: TAACAGCATCTGTCTCTTCCACAAACGAGGAGAAAG...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATATTGCTTTCTTTTTCTTaGTCCCTGGGTCTGGTTTGG | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGILLSFS*SLGLVW Trigger: CCAAACCAGACCCAGGGACCAAGAAAAAGAAAGCAA...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR TCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTTCACAAAGAGGCCCTTaGTATTTACCTCAGCTATTT | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICSQRGP*YLPQLF Trigger: AAATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGA...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR GCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTTGTGGAAGAGACAGATaGTGTTATCCATCCAAACAT | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICCGRDR*CYPSKH Trigger: ATGTTTGGATGGATAACAGCATCTGTCTCTTCCACA...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATAGGGCGTTTTCTGTATTaGTTCTTCTTTCTCCTCGTT | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGIGRFLY*FFFLLV Trigger: AACGAGGAGAAAGAAGAACCAATACAGAAAACGCCC...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CCA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTATCTTTGGGAAGAAGTaGACTGAAGAATGCTGTTTC | + |
Preference number: 4 (lower is better) Translates to: RTASVIKRDPQKFIAIICIFGKK*TEECCF Trigger: GAAACAGCATTCTTCAGTCCACTTCTTCCCAAAGAT...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR GCA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATATGTACTTTACTGTCTTaGTTATTGATGCTGGTGACA | + |
Preference number: 4 (lower is better) Translates to: ASVIKRDPQKFIAIICGICTLLS*LLMLVT Trigger: TGTCACCAGCATCAATAAGCAAGACAGTAAAGTACA...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | CCGGAGCTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTTGCTCACGTTCTCGGCTaGGGGTGTGTGGGCGGTGAG | + |
Preference number: 5 (lower is better) Translates to: PELCSKPGSQLPGQPLAFAHVLG*GCVGGE Trigger: CTCACCGCCCACACACCCCAAGCCGAGAACGTGAGC...AAACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAGCTCCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | ACCGGAGCTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTGGAGAAGTGTTGGGATaGCGGCACCAGGGGCTCTTA | + |
Preference number: 5 (lower is better) Translates to: TGALLQARFPAPRSASRVGEVLG*RHQGLL Trigger: TAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCC...AACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAGCTCCGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS GCA 90 bp | GAGCTCGACTGGGGCTGCCTCCGTGGAACCATGGAGCTGGTGCTCTaGTTTCCCAGGCTGCTGTCTTTGTGGGAGCAGCTCAGGATGGTG | + |
Preference number: 5 (lower is better) Translates to: ELDWGCLRGTMELVL*FPRLLSLWEQLRMV Trigger: CACCATCCTGAGCTGCTCCCACAAAGACAGCAGCCTGGGAAAGCAGAGCACCAGCTCCATGGTTCCACGGAGGCAGCCCCAGTCGAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CCA 90 bp | ACGTATCCACGTCAGAGCTCGACTGGGGCTGCCTCCGTGGAACCATaGAGCTGGTGCTCTGCTTTCCCAGGCTGCTGTCTTTGTGGGAGC | + |
Preference number: 5 (lower is better) Translates to: TYPRQSSTGAASVEP*SWCSAFPGCCLCGS Trigger: GCTCCCACAAAGACAGCAGCCTGGGAAAGCAGAGCACCAGCTCCATGGTTCCACGGAGGCAGCCCCAGTCGAGCTCTGACGTGGATACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS GCA 90 bp | CTTGCTCTGTTCCTCCCAAACAAAGTCCGTTGGTGGCTGTGGCTTTaGTTCCGAAGCTGCTGCCCACACTGTCACCGTGGAGTTGGCCTG | + |
Preference number: 5 (lower is better) Translates to: LALFLPNKVRWWLWL*FRSCCPHCHRGVGL Trigger: CAGGCCAACTCCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAACAGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | CCGGAGCTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTTTTTGCTTTCTTTTTCTaGGTCCCTGGGTCTGGTTTG | + |
Preference number: 5 (lower is better) Translates to: PELCSKPGSQLPGQPLAFFAFFF*VPGSGL Trigger: CAAACCAGACCCAGGGACCAAGAAAAAGAAAGCAAA...AAACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAGCTCCGG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | AGTCTGACGTCATCACACATGCAGCACGCATGCTCCCCTCGTATCCACGCCCCCTTCCTCCTTTTGGGCTaGACACTGCTGCTTGCTGTG | + |
Preference number: 5 (lower is better) Translates to: SLTSSHMQHACSPRIHAPFLLLG*TLLLAV Trigger: CACAGCAAGCAGCAGTGTCAAGCCCAAAAGGAGGAA...GGGGGCGTGGATACGAGGGGAGCATGCGTGCTGCATGTGTGATGACGTCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS GCA 90 bp | TTTGCTTCCGAAGCTGCTGCCCACACTGTCACCGTGGAGTTGGCCTaGAGTGTGATGTTGTCGGGGAACTGGTACAAGGAGACTGCGTGT | + |
Preference number: 5 (lower is better) Translates to: FASEAAAHTVTVELA*SVMLSGNWYKETAC Trigger: ACACGCAGTCTCCTTGTACCAGTTCCCCGACAACATCACACTGCAGGCCAACTCCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 90 bp | TCGGAACTTGCTCTGTTCCTCCCAAACAAAGTCCGTTGGTGGCTGTaGCTTTGCTTCCGAAGCTGCTGCCCACACTGTCACCGTGGAGTT | + |
Preference number: 5 (lower is better) Translates to: SELALFLPNKVRWWL*LCFRSCCPHCHRGV Trigger: AACTCCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAACAGAGCAAGTTCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 90 bp | ACTGGATCGGAACTTGCTCTGTTCCTCCCAAACAAAGTCCGTTGGTaGCTGTGGCTTTGCTTCCGAAGCTGCTGCCCACACTGTCACCGT | + |
Preference number: 5 (lower is better) Translates to: TGSELALFLPNKVRW*LWLCFRSCCPHCHR Trigger: ACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAACAGAGCAAGTTCCGATCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | GAGCTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTTAGATTTTCATTGGAGGAGTaGACAAGCCTCACAAAGAGG | + |
Preference number: 5 (lower is better) Translates to: ELCSKPGSQLPGQPLAFRFSLEE*TSLTKR Trigger: CCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAAA...TCTAAACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | CTCTGCTCCAAGCCCGGTTCCCAGCTCCCAGGTCAGCCTCTCGCGTTTAGATCTGTGTCCATTCACGTTTaGCTGAAGAATGTGGTTTCC | + |
Preference number: 5 (lower is better) Translates to: LCSKPGSQLPGQPLAFRSVSIHV*LKNVVS Trigger: GGAAACCACATTCTTCAGCAAAACGTGAATGGACAC...AGATCTAAACGCGAGAGGCTGACCTGGGAGCTGGGAACCGGGCTTGGAGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | AGGTGCCTGAAGCCTGGAATTTTAGCTGATGTGCCTGGACTTGCCCAGTTCTTATTGGTGGCTGTGGCTTaGCTTCCGAAGCTGCTGCCC | + |
Preference number: 5 (lower is better) Translates to: RCLKPGILADVPGLAQFLLVAVA*LPKLLP Trigger: GGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAA...TAAGAACTGGGCAAGTCCAGGCACATCAGCTAAAATTCCAGGCTTCAGGCACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS TCA 90 bp | CCAGCTGTCCTCTGGACGATAAGGTGGAGCTGTTCTGGGTGCTGGTaGTCTGGTAGAAGCCAATTGGCATTTCTTGGGAAAATGAGCGGG | + |
Preference number: 5 (lower is better) Translates to: PAVLWTIRWSCSGCW*SGRSQLAFLGKMSG Trigger: CCCGCTCATTTTCCCAAGAAATGCCAATTGGCTTCTACCAGATCACCAGCACCCAGAACAGCTCCACCTTATCGTCCAGAGGACAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | TCTCATTTATCTGGCTGGGGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGTTGGTGGCTGTGGCTTaGCTTCCGAAGCTGCTGCCC | + |
Preference number: 5 (lower is better) Translates to: SHLSGWGLLFQHPDSRTELVAVA*LPKLLP Trigger: GGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAA...CTCAGTCCGACTATCAGGGTGTTGAAACAACAGACCCCAGCCAGATAAATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | ATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCAGCAATCCCTGGGAGGTTGCACATGTGGTTTCTCATaGATGGGACCACCACTGAGC | + |
Preference number: 5 (lower is better) Translates to: IYVRGFSPLWVQQSLGGCTCGFS*MGPPLS Trigger: GCTCAGTGGTGGTCCCATCAATGAGAAACCACATGT...GCAACCTCCCAGGGATTGCTGGACCCACAGTGGGCTGAACCCTCTCACATAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | AGGTGCCTGAAGCCTGGAATTTTAGCTGATGTGCCTGGACTTGCCCAGTTCTTAGGAGAAGTGTTGGGATaGCGGCACCAGGGGCTCTTA | + |
Preference number: 5 (lower is better) Translates to: RCLKPGILADVPGLAQFLGEVLG*RHQGLL Trigger: TAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCC...TAAGAACTGGGCAAGTCCAGGCACATCAGCTAAAATTCCAGGCTTCAGGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS CCA 90 bp | ACGGATGTGGAGAAGTGTTGGGATTGCGGCACCAGGGGCTCTTATTaGGTAAGACAGTTGGCGGGATTTCCTTTTCTCTGTAGAGGACAG | + |
Preference number: 5 (lower is better) Translates to: TDVEKCWDCGTRGSY*VRQLAGFPFLCRGQ Trigger: CTGTCCTCTACAGAGAAAAGGAAATCCCGCCAACTGTCTTACCCAATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCCACATCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 90 bp | AGTCATGTGAGTCAATCAGAGAGCTGTACGGATGTGGAGAAGTGTTaGGATTGCGGCACCAGGGGCTCTTATTGGGTAAGACAGTTGGCG | + |
Preference number: 5 (lower is better) Translates to: SHVSQSESCTDVEKC*DCGTRGSYWVRQLA Trigger: CGCCAACTGTCTTACCCAATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCCACATCCGTACAGCTCTCTGATTGACTCACATGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | TGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAAGTCTCCCAAACAAAGTCCGTaGGTGGCTGTGGCTTTGCTT | + |
Preference number: 5 (lower is better) Translates to: CCFNTLIVGLRDVRLCKSPKQSP*VAVALL Trigger: AAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGG...AGACTTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | GCGGCATTCACTGCTGTGGAGGGACTAGAAGTTTCCTGGAAGCTGCTTGTCTTTCCCAAACAAAGTCCGTaGGTGGCTGTGGCTTTGCTT | + |
Preference number: 5 (lower is better) Translates to: AAFTAVEGLEVSWKLLVFPKQSP*VAVALL Trigger: AAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGG...AAAGACAAGCAGCTTCCAGGAAACTTCTAGTCCCTCCACAGCAGTGAATGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS CCA 90 bp | TCGAATTCAATGTCAGTCTCTAACTTCTCCCAGGCTTGCTTCCAGTaGATAGGAGTGTACCAGGCAATGGCCTCACCATTGGGCTTGCAC | + |
Preference number: 5 (lower is better) Translates to: SNSMSVSNFSQACFQ*IGVYQAMASPLGLH Trigger: GTGCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTCCTATCCACTGGAAGCAAGCCTGGGAGAAGTTAGAGACTGACATTGAATTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | GAGCTAGTCCTTTGGGATATGAATGCTTCCTGTAGGAGCTGGAGAGTTGGCTCCACATGTGGTTTCTCATaGATGGGACCACCACTGAGC | + |
Preference number: 5 (lower is better) Translates to: ELVLWDMNASCRSWRVGSTCGFS*MGPPLS Trigger: GCTCAGTGGTGGTCCCATCAATGAGAAACCACATGT...GGAGCCAACTCTCCAGCTCCTACAGGAAGCATTCATATCCCAAAGGACTAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS TCA 90 bp | GCTTTCTTTTTCTTGGTCCCTGGGTCTGGTTTGGGCTTGGTTGGCTaGGGCTTGAGCTGTGTATCTAAACTGCTTTCGGAAATGTCCGAG | + |
Preference number: 5 (lower is better) Translates to: AFFFLVPGSGLGLVG*GLSCVSKLLSEMSE Trigger: CTCGGACATTTCCGAAAGCAGTTTAGATACACAGCTCAAGCCTCAGCCAACCAAGCCCAAACCAGACCCAGGGACCAAGAAAAAGAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS GCA 90 bp | GTTGGCCTGCAGTGTGATGTTGTCGGGGAACTGGTACAAGGAGACTaGGTGTCCATTCACGTTTTGCTGAAGAATGTGGTTTCCAATCTC | + |
Preference number: 5 (lower is better) Translates to: VGLQCDVVGELVQGD*VSIHVLLKNVVSNL Trigger: GAGATTGGAAACCACATTCTTCAGCAAAACGTGAATGGACACGCAGTCTCCTTGTACCAGTTCCCCGACAACATCACACTGCAGGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | TGGAAAATTCTCATTTATCTGGCTGGGGTCTGTTGTTTCAACACCCTGATAGTCCCCAGGCTGCTGTCTTaGTGGGAGCAGCTCAGGATG | + |
Preference number: 5 (lower is better) Translates to: WKILIYLAGVCCFNTLIVPRLLS*WEQLRM Trigger: CATCCTGAGCTGCTCCCACAAAGACAGCAGCCTGGG...GACTATCAGGGTGTTGAAACAACAGACCCCAGCCAGATAAATGAGAATTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | ATGATTTATGTGAGAGGGTTCAGCCCACTGTGGGTCCAGCAATCCCTGGGAGGTTTTTCATTGGAGGAGTaGACAAGCCTCACAAAGAGG | + |
Preference number: 5 (lower is better) Translates to: MIYVRGFSPLWVQQSLGGFSLEE*TSLTKR Trigger: CCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAAA...ACCTCCCAGGGATTGCTGGACCCACAGTGGGCTGAACCCTCTCACATAAATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | GGTCTGTTGTTTCAACACCCTGATAGTCGGACTGAGAGACGTGCGCCTCTGCAATCTACTTCCTTTTCATaGGAGGAGTTGACAAGCCTC | + |
Preference number: 5 (lower is better) Translates to: GLLFQHPDSRTERRAPLQSTSFS*EELTSL Trigger: GAGGCTTGTCAACTCCTCCAATGAAAAGGAAGTAGA...TTGCAGAGGCGCACGTCTCTCAGTCCGACTATCAGGGTGTTGAAACAACAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | ACTTCAGGACTGTCACACTCTTTGCTCTTTTGTCCAACCTCCGGTCCCAGCTGCGTGTCCATTCACGTTTaGCTGAAGAATGTGGTTTCC | + |
Preference number: 5 (lower is better) Translates to: TSGLSHSLLFCPTSGPSCVSIHV*LKNVVS Trigger: GGAAACCACATTCTTCAGCAAAACGTGAATGGACAC...GCAGCTGGGACCGGAGGTTGGACAAAAGAGCAAAGAGTGTGACAGTCCTGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | TATCTAACTAGTCCTGGTCAAGATGTGGCCCTGCCCAGTATGGACCCAGCCTTGAGGGCGTTTTCTGTATaGGTTCTTCTTTCTCCTCGT | + |
Preference number: 5 (lower is better) Translates to: YLTSPGQDVALPSMDPALRAFSV*VLLSPR Trigger: ACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCT...CAAGGCTGGGTCCATACTGGGCAGGGCCACATCTTGACCAGGACTAGTTAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS GCA 90 bp | GAGCATCTTTCGAATTCAATGTCAGTCTCTAACTTCTCCCAGGCTTaGTTCCAGTGGATAGGAGTGTACCAGGCAATGGCCTCACCATTG | + |
Preference number: 5 (lower is better) Translates to: EHLSNSMSVSNFSQA*FQWIGVYQAMASPL Trigger: CAATGGTGAGGCCATTGCCTGGTACACTCCTATCCACTGGAAGCAAGCCTGGGAGAAGTTAGAGACTGACATTGAATTCGAAAGATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | CACTGTCATGCAGGAATTCCATTAGCCAAGACCCCGGGGCAGAAGTTGGGTTTGCTCACAAAGAGGCCCTaGATATTTACCTCAGCTATT | + |
Preference number: 5 (lower is better) Translates to: HCHAGIPLAKTPGQKLGLLTKRP*IFTSAI Trigger: AATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGAG...CAAACCCAACTTCTGCCCCGGGGTCTTGGCTAATGGAATTCCTGCATGACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS TCA 90 bp | AGAAGCCAATTGGCATTTCTTGGGAAAATGAGCGGGACAACGGGATaGGCGTGGTGGAGTCTGAATCCATTATCTTTGGGAAGAAGTGGA | + |
Preference number: 5 (lower is better) Translates to: RSQLAFLGKMSGTTG*AWWSLNPLSLGRSG Trigger: TCCACTTCTTCCCAAAGATAATGGATTCAGACTCCACCACGCTCATCCCGTTGTCCCGCTCATTTTCCCAAGAAATGCCAATTGGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | CCTCTGCAAGTCTCTTCAGAGTGCCTGCATCACTGCCAGATTGCTGAAGAACTCTCTGGTAGAAGCCAATaGGCATTTCTTGGGAAAATG | + |
Preference number: 5 (lower is better) Translates to: PLQVSSECLHHCQIAEELSGRSQ*AFLGKM Trigger: CATTTTCCCAAGAAATGCCAATTGGCTTCTACCAGA...GAGTTCTTCAGCAATCTGGCAGTGATGCAGGCACTCTGAAGAGACTTGCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111706.8 |
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CDS-3UTR CAA 90 bp | GCCTTCCTTCCTCTGCAAATTGTCCCTTCTACTCCCGTGTCTTATGGCTTGTTTAGGGCGTTTTCTGTATaGGTTCTTCTTTCTCCTCGT | + |
Preference number: 5 (lower is better) Translates to: AFLPLQIVPSTPVSYGLFRAFSV*VLLSPR Trigger: ACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCT...AAACAAGCCATAAGACACGGGAGTAGAAGGGACAATTTGCAGAGGAAGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACCCAGGCTGCTGTCTTaGTGGGAGCAGCTCAGGATG | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGIPRLLS*WEQLRM Trigger: CATCCTGAGCTGCTCCCACAAAGACAGCAGCCTGGG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATATTGGTGGCTGTGGCTTaGCTTCCGAAGCTGCTGCCC | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGILVAVA*LPKLLP Trigger: GGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAA...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS CCA 90 bp | CTTGGGAGGGCGTTTTCTGTATTGGTTCTTCTTTCTCCTCGTTTGTaGAAGAGACAGATGCTGTTATCCATCCAAACATGTGGTTTCTCA | + |
Preference number: 5 (lower is better) Translates to: LGRAFSVLVLLSPRL*KRQMLLSIQTCGFS Trigger: TGAGAAACCACATGTTTGGATGGATAACAGCATCTGTCTCTTCCACAAACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCTCCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
||
CDS CCA 90 bp | GGGATGAGCGTGGTGGAGTCTGAATCCATTATCTTTGGGAAGAAGTaGACTGAAGAATGCTGTTTCGATGGAGTGATGGTTCCAATTTTT | + |
Preference number: 5 (lower is better) Translates to: GMSVVESESIIFGKK*TEECCFDGVMVPIF Trigger: AAAAATTGGAACCATCACTCCATCGAAACAGCATTCTTCAGTCCACTTCTTCCCAAAGATAATGGATTCAGACTCCACCACGCTCATCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111708.9 ENSMUST00000149666.2 |
||
CDS-3UTR CAA 90 bp | GTCCCTTCTACTCCCGTGTCTTATGGCTTGTTTTCTAATGCATGCTGGATATGGCTCACAAAGAGGCCCTaGATATTTACCTCAGCTATT | + |
Preference number: 5 (lower is better) Translates to: VPSTPVSYGLFSNACWIWLTKRP*IFTSAI Trigger: AATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGAG...CCATATCCAGCATGCATTAGAAAACAAGCCATAAGACACGGGAGTAGAAGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATAGGAGAAGTGTTGGGATaGCGGCACCAGGGGCTCTTA | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGIGEVLG*RHQGLL Trigger: TAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCC...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | GCTACTATGAGATCTGCTTCCTTCAGAACAATCTCCCATGGCAAGCTTAGTCATTTTGCTTTCTTTTTCTaGGTCCCTGGGTCTGGTTTG | + |
Preference number: 5 (lower is better) Translates to: ATMRSASFRTISHGKLSHFAFFF*VPGSGL Trigger: CAAACCAGACCCAGGGACCAAGAAAAAGAAAGCAAA...ATGACTAAGCTTGCCATGGGAGATTGTTCTGAAGGAAGCAGATCTCATAGTAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
||
CDS CCA 90 bp | TTTACCTCAGCTATTTTAATTTCTCCGAGAGAACTGGATGTAAATTaGCCGACTTCCTCAAGGATCACAGAAAGGTGTTCGCTCACGTTC | + |
Preference number: 5 (lower is better) Translates to: FTSAILISPRELDVN*PTSSRITERCSLTF Trigger: GAACGTGAGCGAACACCTTTCTGTGATCCTTGAGGAAGTCGGCCAATTTACATCCAGTTCTCTCGGAGAAATTAAAATAGCTGAGGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACCCAAACAAAGTCCGTaGGTGGCTGTGGCTTTGCTT | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGIPKQSP*VAVALL Trigger: AAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTACATGTGGTTTCTCATaGATGGGACCACCACTGAGC | + |
Preference number: 5 (lower is better) Translates to: RTASVIKRDPQKFIAIICTCGFS*MGPPLS Trigger: GCTCAGTGGTGGTCCCATCAATGAGAAACCACATGT...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTTTTTCATTGGAGGAGTaGACAAGCCTCACAAAGAGG | + |
Preference number: 5 (lower is better) Translates to: RTASVIKRDPQKFIAIICFSLEE*TSLTKR Trigger: CCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAAA...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | GAAAACGGCATTACTCCATATTATTATGCTCACATTGTCTTAAGGATCTCCCATTCTACTTCCTTTTCATaGGAGGAGTTGACAAGCCTC | + |
Preference number: 5 (lower is better) Translates to: ENGITPYYYAHIVLRISHSTSFS*EELTSL Trigger: GAGGCTTGTCAACTCCTCCAATGAAAAGGAAGTAGA...ATGGGAGATCCTTAAGACAATGTGAGCATAATAATATGGAGTAATGCCGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS-3UTR CAA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTAGGGCGTTTTCTGTATaGGTTCTTCTTTCTCCTCGT | + |
Preference number: 5 (lower is better) Translates to: RTASVIKRDPQKFIAIICRAFSV*VLLSPR Trigger: ACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCT...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTTTTGCTTTCTTTTTCTaGGTCCCTGGGTCTGGTTTG | + |
Preference number: 5 (lower is better) Translates to: RTASVIKRDPQKFIAIICFAFFF*VPGSGL Trigger: CAAACCAGACCCAGGGACCAAGAAAAAGAAAGCAAA...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTTTACTGTCTTGCTTATaGATGCTGGTGACACTGGCT | + |
Preference number: 5 (lower is better) Translates to: RTASVIKRDPQKFIAIICLLSCL*MLVTLA Trigger: AGCCAGTGTCACCAGCATCAATAAGCAAGACAGTAA...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
||
CDS-3UTR CAA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTCTCACAAAGAGGCCCTaGATATTTACCTCAGCTATT | + |
Preference number: 5 (lower is better) Translates to: RTASVIKRDPQKFIAIICLTKRP*IFTSAI Trigger: AATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGAG...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATATCTACTTCCTTTTCATaGGAGGAGTTGACAAGCCTC | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGISTSFS*EELTSL Trigger: GAGGCTTGTCAACTCCTCCAATGAAAAGGAAGTAGA...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATAGTGTCCATTCACGTTTaGCTGAAGAATGTGGTTTCC | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGIVSIHV*LKNVVS Trigger: GGAAACCACATTCTTCAGCAAAACGTGAATGGACAC...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | AGGACAGCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTCTGAATCCATTATCTTaGGGAAGAAGTGGACTGAAG | + |
Preference number: 5 (lower is better) Translates to: RTASVIKRDPQKFIAIICLNPLS*GRSGLK Trigger: CTTCAGTCCACTTCTTCCCAAAGATAATGGATTCAG...ACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGCTGTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATATCTGGTAGAAGCCAATaGGCATTTCTTGGGAAAATG | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGISGRSQ*AFLGKM Trigger: CATTTTCCCAAGAAATGCCAATTGGCTTCTACCAGA...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS-3UTR CAA 90 bp | GCTTCGGTCATAAAGCGAGACCCTCAAAAATTTATTGCAATTATTTGTGGAATACTGTACTTTACTGTCTaGCTTATTGATGCTGGTGAC | + |
Preference number: 5 (lower is better) Translates to: ASVIKRDPQKFIAIICGILYFTV*LIDAGD Trigger: GTCACCAGCATCAATAAGCAAGACAGTAAAGTACAG...TATTCCACAAATAATTGCAATAAATTTTTGAGGGTCTCGCTTTATGACCGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111708.9 |
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CDS CCA 72 bp | CGTCAGAGCTCGACTGGGGCTGCCTCCGTGGAACCATaGAGCTGGTGCTCTGCTTTCCCAGGCTGCTGTCTT | + |
Preference number: 6 (lower is better) Translates to: RQSSTGAASVEP*SWCSAFPGCCL Trigger: AAGACAGCAGCCTGGGAAAGCAGAGCACCAGCTCCATGGTTCCACGGAGGCAGCCCCAGTCGAGCTCTGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS GCA 72 bp | GTCCGTTGGTGGCTGTGGCTTTGCTTCCGAAGCTGCTaGCCACACTGTCACCGTGGAGTTGGCCTGCAGTGT | + |
Preference number: 6 (lower is better) Translates to: VRWWLWLCFRSC*PHCHRGVGLQC Trigger: ACACTGCAGGCCAACTCCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | GTTCCTCCCAAACAAAGTCCGTTGGTGGCTGTGGCTTaGCTTCCGAAGCTGCTGCCCACACTGTCACCGTGG | + |
Preference number: 6 (lower is better) Translates to: VPPKQSPLVAVA*LPKLLPTLSPW Trigger: CCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | CGTGGAACCATGGAGCTGGTGCTCTGCTTTCCCAGGCTGCTGTCTTaGTGGGAGCAGCTCAGGATGGTGGATTTAGAAGCCAGCTGTCCT | + |
Preference number: 6 (lower is better) Translates to: RGTMELVLCFPRLLS*WEQLRMVDLEASCP Trigger: AGGACAGCTGGCTTCTAAATCCACCATCCTGAGCTGCTCCCACAAAGACAGCAGCCTGGGAAAGCAGAGCACCAGCTCCATGGTTCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CAA 90 bp | GCTGCTGCCCACACTGTCACCGTGGAGTTGGCCTGCAGTGTGATGTaGTCGGGGAACTGGTACAAGGAGACTGCGTGTCCATTCACGTTT | + |
Preference number: 6 (lower is better) Translates to: AAAHTVTVELACSVM*SGNWYKETACPFTF Trigger: AAACGTGAATGGACACGCAGTCTCCTTGTACCAGTTCCCCGACAACATCACACTGCAGGCCAACTCCACGGTGACAGTGTGGGCAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | TGTGGCTTTGCTTCCGAAGCTGCTGCCCACACTGTCACCGTGGAGTaGGCCTGCAGTGTGATGTTGTCGGGGAACTGGTACAAGGAGACT | + |
Preference number: 6 (lower is better) Translates to: CGFASEAAAHTVTVE*ACSVMLSGNWYKET Trigger: AGTCTCCTTGTACCAGTTCCCCGACAACATCACACTGCAGGCCAACTCCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | ACTTGCTCTGTTCCTCCCAAACAAAGTCCGTTGGTGGCTGTGGCTTaGCTTCCGAAGCTGCTGCCCACACTGTCACCGTGGAGTTGGCCT | + |
Preference number: 6 (lower is better) Translates to: TCSVPPKQSPLVAVA*LPKLLPTLSPWSWP Trigger: AGGCCAACTCCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAACAGAGCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | CCGGACTGGATCGGAACTTGCTCTGTTCCTCCCAAACAAAGTCCGTaGGTGGCTGTGGCTTTGCTTCCGAAGCTGCTGCCCACACTGTCA | + |
Preference number: 6 (lower is better) Translates to: PDWIGTCSVPPKQSP*VAVALLPKLLPTLS Trigger: TGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAACAGAGCAAGTTCCGATCCAGTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | GCTTGCTTCCAGTGGATAGGAGTGTACCAGGCAATGGCCTCACCATaGGGCTTGCACAAGATGGTCGTGCAGTCCGGACTGGATCGGAAC | + |
Preference number: 6 (lower is better) Translates to: ACFQWIGVYQAMASP*GLHKMVVQSGLDRN Trigger: GTTCCGATCCAGTCCGGACTGCACGACCATCTTGTGCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTCCTATCCACTGGAAGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS GCA 72 bp | TTCCTCCCAAACAAAGTCCGTTGGTGGCTGTGGCTTTaGTTCCGAAGCTGCTGCCCACACTGTCACCGTGGA | + |
Preference number: 6 (lower is better) Translates to: FLPNKVRWWLWL*FRSCCPHCHRG Trigger: TCCACGGTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | GCTCTGTTCCTCCCAAACAAAGTCCGTTGGTGGCTGTaGCTTTGCTTCCGAAGCTGCTGCCCACACTGTCAC | + |
Preference number: 6 (lower is better) Translates to: ALFLPNKVRWWL*LCFRSCCPHCH Trigger: GTGACAGTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAACAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | ATAGGAGTGTACCAGGCAATGGCCTCACCATTGGGCTaGCACAAGATGGTCGTGCAGTCCGGACTGGATCGG | + |
Preference number: 6 (lower is better) Translates to: IGVYQAMASPLG*HKMVVQSGLDR Trigger: CCGATCCAGTCCGGACTGCACGACCATCTTGTGCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | CAGTGGATAGGAGTGTACCAGGCAATGGCCTCACCATaGGGCTTGCACAAGATGGTCGTGCAGTCCGGACTG | + |
Preference number: 6 (lower is better) Translates to: QWIGVYQAMASP*GLHKMVVQSGL Trigger: CAGTCCGGACTGCACGACCATCTTGTGCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTCCTATCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | TTCCAGTGGATAGGAGTGTACCAGGCAATGGCCTCACCATTGGGCTaGCACAAGATGGTCGTGCAGTCCGGACTGGATCGGAACTTGCTC | + |
Preference number: 6 (lower is better) Translates to: FQWIGVYQAMASPLG*HKMVVQSGLDRNLL Trigger: GAGCAAGTTCCGATCCAGTCCGGACTGCACGACCATCTTGTGCAAGCCCAATGGTGAGGCCATTGCCTGGTACACTCCTATCCACTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS GCA 72 bp | CTGAGAATTCCTCCTTTTGGGCTTGACACTGCTGCTTaGTGTGCAGGGGTCCTGGGATACCTCCCACTACTG | + |
Preference number: 6 (lower is better) Translates to: LRIPPFGLDTAA*CAGVLGYLPLL Trigger: CAGTAGTGGGAGGTATCCCAGGACCCCTGCACAGCAAGCAGCAGTGTCAAGCCCAAAAGGAGGAATTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS CCA 72 bp | AGGATCACAGAAAGGTGTTCGCTCACGTTCTCGGCTTaGGGTGTGTGGGCGGTGAGCTTCTTCGATTCTCCA | + |
Preference number: 6 (lower is better) Translates to: RITERCSLTFSA*GVWAVSFFDSP Trigger: TGGAGAATCGAAGAAGCTCACCGCCCACACACCCCAAGCCGAGAACGTGAGCGAACACCTTTCTGTGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CCA 72 bp | GAACTTGCTCTGTTCCTCCCAAACAAAGTCCGTTGGTaGCTGTGGCTTTGCTTCCGAAGCTGCTGCCCACAC | + |
Preference number: 6 (lower is better) Translates to: ELALFLPNKVRW*LWLCFRSCCPH Trigger: GTGTGGGCAGCAGCTTCGGAAGCAAAGCCACAGCCACCAACGGACTTTGTTTGGGAGGAACAGAGCAAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | TTGGGCTTGACACTGCTGCTTGCTGTGCAGGGGTCCTaGGATACCTCCCACTACTGTGAACCTGGATTGACA | + |
Preference number: 6 (lower is better) Translates to: LGLTLLLAVQGS*DTSHYCEPGLT Trigger: TGTCAATCCAGGTTCACAGTAGTGGGAGGTATCCCAGGACCCCTGCACAGCAAGCAGCAGTGTCAAGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS CAA 72 bp | ATGGAGCTGGTGCTCTGCTTTCCCAGGCTGCTGTCTTaGTGGGAGCAGCTCAGGATGGTGGATTTAGAAGCC | + |
Preference number: 6 (lower is better) Translates to: MELVLCFPRLLS*WEQLRMVDLEA Trigger: GGCTTCTAAATCCACCATCCTGAGCTGCTCCCACAAAGACAGCAGCCTGGGAAAGCAGAGCACCAGCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CAA 72 bp | AAGGATCACAGAAAGGTGTTCGCTCACGTTCTCGGCTaGGGGTGTGTGGGCGGTGAGCTTCTTCGATTCTCC | + |
Preference number: 6 (lower is better) Translates to: KDHRKVFAHVLG*GCVGGELLRFS Trigger: GGAGAATCGAAGAAGCTCACCGCCCACACACCCCAAGCCGAGAACGTGAGCGAACACCTTTCTGTGATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CAA 72 bp | CACAAGATGGTCGTGCAGTCCGGACTGGATCGGAACTaGCTCTGTTCCTCCCAAACAAAGTCCGTTGGTGGC | + |
Preference number: 6 (lower is better) Translates to: HKMVVQSGLDRN*LCSSQTKSVGG Trigger: GCCACCAACGGACTTTGTTTGGGAGGAACAGAGCAAGTTCCGATCCAGTCCGGACTGCACGACCATCTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | GTGGAGTTGGCCTGCAGTGTGATGTTGTCGGGGAACTaGTACAAGGAGACTGCGTGTCCATTCACGTTTTGC | + |
Preference number: 6 (lower is better) Translates to: VELACSVMLSGN*YKETACPFTFC Trigger: GCAAAACGTGAATGGACACGCAGTCTCCTTGTACCAGTTCCCCGACAACATCACACTGCAGGCCAACTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS TCA 72 bp | TTCTCCGAGAGAACTGAGAATTCCTCCTTTTGGGCTTaGCACTGCTGCTTGCTGTGCAGGGGTCCTGGGATA | + |
Preference number: 6 (lower is better) Translates to: FSERTENSSFWA*HCCLLCRGPGI Trigger: TATCCCAGGACCCCTGCACAGCAAGCAGCAGTGTCAAGCCCAAAAGGAGGAATTCTCAGTTCTCTCGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |
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CDS GCA 72 bp | TCAGAGAGCTGTACGGATGTGGAGAAGTGTTGGGATTaGGGCACCAGGGGCTCTTATTGGGTAAGACAGTTG | + |
Preference number: 6 (lower is better) Translates to: SESCTDVEKCWD*GTRGSYWVRQL Trigger: CAACTGTCTTACCCAATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCCACATCCGTACAGCTCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | GGAGAAGTGTTGGGATTGCGGCACCAGGGGCTCTTATaGGGTAAGACAGTTGGCGGGATTTCCTTTTCTCTG | + |
Preference number: 6 (lower is better) Translates to: GEVLGLRHQGLL*GKTVGGISFSL Trigger: CAGAGAAAAGGAAATCCCGCCAACTGTCTTACCCAATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | AAGTGTTGGGATTGCGGCACCAGGGGCTCTTATTGGGTAAGACAGTaGGCGGGATTTCCTTTTCTCTGTAGAGGACAGGGTAGACTTGGG | + |
Preference number: 6 (lower is better) Translates to: KCWDCGTRGSYWVRQ*AGFPFLCRGQGRLG Trigger: CCCAAGTCTACCCTGTCCTCTACAGAGAAAAGGAAATCCCGCCAACTGTCTTACCCAATAAGAGCCCCTGGTGCCGCAATCCCAACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | ATGTCAGTCTCTAACTTCTCCCAGGCTTGCTTCCAGTaGATAGGAGTGTACCAGGCAATGGCCTCACCATTG | + |
Preference number: 6 (lower is better) Translates to: MSVSNFSQACFQ*IGVYQAMASPL Trigger: CAATGGTGAGGCCATTGCCTGGTACACTCCTATCCACTGGAAGCAAGCCTGGGAGAAGTTAGAGACTGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | GAGAAGTGTTGGGATTGCGGCACCAGGGGCTCTTATTaGGTAAGACAGTTGGCGGGATTTCCTTTTCTCTGT | + |
Preference number: 6 (lower is better) Translates to: EKCWDCGTRGSY*VRQLAGFPFLC Trigger: ACAGAGAAAAGGAAATCCCGCCAACTGTCTTACCCAATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | AGTCAATCAGAGAGCTGTACGGATGTGGAGAAGTGTTaGGATTGCGGCACCAGGGGCTCTTATTGGGTAAGA | + |
Preference number: 6 (lower is better) Translates to: SQSESCTDVEKC*DCGTRGSYWVR Trigger: TCTTACCCAATAAGAGCCCCTGGTGCCGCAATCCCAACACTTCTCCACATCCGTACAGCTCTCTGATTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS TCA 72 bp | CTCTGGACGATAAGGTGGAGCTGTTCTGGGTGCTGGTaGTCTGGTAGAAGCCAATTGGCATTTCTTGGGAAA | + |
Preference number: 6 (lower is better) Translates to: LWTIRWSCSGCW*SGRSQLAFLGK Trigger: TTTCCCAAGAAATGCCAATTGGCTTCTACCAGATCACCAGCACCCAGAACAGCTCCACCTTATCGTCCAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS GCA 72 bp | TCGAATTCAATGTCAGTCTCTAACTTCTCCCAGGCTTaGTTCCAGTGGATAGGAGTGTACCAGGCAATGGCC | + |
Preference number: 6 (lower is better) Translates to: SNSMSVSNFSQA*FQWIGVYQAMA Trigger: GGCCATTGCCTGGTACACTCCTATCCACTGGAAGCAAGCCTGGGAGAAGTTAGAGACTGACATTGAATTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS TCA 72 bp | TTGGCATTTCTTGGGAAAATGAGCGGGACAACGGGATaGGCGTGGTGGAGTCTGAATCCATTATCTTTGGGA | + |
Preference number: 6 (lower is better) Translates to: LAFLGKMSGTTG*AWWSLNPLSLG Trigger: TCCCAAAGATAATGGATTCAGACTCCACCACGCTCATCCCGTTGTCCCGCTCATTTTCCCAAGAAATGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111708.9 ENSMUST00000149666.2 |
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CDS GCA 72 bp | CAGTGTGATGTTGTCGGGGAACTGGTACAAGGAGACTaGGTGTCCATTCACGTTTTGCTGAAGAATGTGGTT | + |
Preference number: 6 (lower is better) Translates to: QCDVVGELVQGD*VSIHVLLKNVV Trigger: AACCACATTCTTCAGCAAAACGTGAATGGACACGCAGTCTCCTTGTACCAGTTCCCCGACAACATCACACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | GAGGACAGGGTAGACTTGGGAGGGCGTTTTCTGTATTaGTTCTTCTTTCTCCTCGTTTGTGGAAGAGACAGA | + |
Preference number: 6 (lower is better) Translates to: EDRVDLGGRFLY*FFFLLVCGRDR Trigger: TCTGTCTCTTCCACAAACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCTCCCAAGTCTACCCTGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | AGAGGACAGGGTAGACTTGGGAGGGCGTTTTCTGTATaGGTTCTTCTTTCTCCTCGTTTGTGGAAGAGACAG | + |
Preference number: 6 (lower is better) Translates to: RGQGRLGRAFSV*VLLSPRLWKRQ Trigger: CTGTCTCTTCCACAAACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCTCCCAAGTCTACCCTGTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | GACAGTTGGCGGGATTTCCTTTTCTCTGTAGAGGACAGGGTAGACTaGGGAGGGCGTTTTCTGTATTGGTTCTTCTTTCTCCTCGTTTGT | + |
Preference number: 6 (lower is better) Translates to: DSWRDFLFSVEDRVD*GGRFLYWFFFLLVC Trigger: ACAAACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCTCCCAAGTCTACCCTGTCCTCTACAGAGAAAAGGAAATCCCGCCAACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | CGGGATTTCCTTTTCTCTGTAGAGGACAGGGTAGACTaGGGAGGGCGTTTTCTGTATTGGTTCTTCTTTCTC | + |
Preference number: 6 (lower is better) Translates to: RDFLFSVEDRVD*GGRFLYWFFFL Trigger: GAGAAAGAAGAACCAATACAGAAAACGCCCTCCCAAGTCTACCCTGTCCTCTACAGAGAAAAGGAAATCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | CTTATCTCTCCATCCTGTACTTTACTGTCTTGCTTATaGATGCTGGTGACACTGGCTAGAGGCTCCGATGCT | + |
Preference number: 6 (lower is better) Translates to: LISPSCTLLSCL*MLVTLARGSDA Trigger: AGCATCGGAGCCTCTAGCCAGTGTCACCAGCATCAATAAGCAAGACAGTAAAGTACAGGATGGAGAGATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111708.9 ENSMUST00000149666.2 |
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CDS CAA 90 bp | GTTGTCGGGGAACTGGTACAAGGAGACTGCGTGTCCATTCACGTTTaGCTGAAGAATGTGGTTTCCAATCTCTACTTCCTTTTCATTGGA | + |
Preference number: 6 (lower is better) Translates to: VVGELVQGDCVSIHV*LKNVVSNLYFLFIG Trigger: TCCAATGAAAAGGAAGTAGAGATTGGAAACCACATTCTTCAGCAAAACGTGAATGGACACGCAGTCTCCTTGTACCAGTTCCCCGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | AGACTTGGGAGGGCGTTTTCTGTATTGGTTCTTCTTTCTCCTCGTTaGTGGAAGAGACAGATGCTGTTATCCATCCAAACATGTGGTTTC | + |
Preference number: 6 (lower is better) Translates to: RLGRAFSVLVLLSPR*WKRQMLLSIQTCGF Trigger: GAAACCACATGTTTGGATGGATAACAGCATCTGTCTCTTCCACAAACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCTCCCAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS GCA 72 bp | TCTTTTCTTATCTCTCCATCCTGTACTTTACTGTCTTaGTTATTGATGCTGGTGACACTGGCTAGAGGCTCC | + |
Preference number: 6 (lower is better) Translates to: SFLISPSCTLLS*LLMLVTLARGS Trigger: GGAGCCTCTAGCCAGTGTCACCAGCATCAATAAGCAAGACAGTAAAGTACAGGATGGAGAGATAAGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111708.9 ENSMUST00000149666.2 |
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CDS CCA 72 bp | GTGGTGGAGTCTGAATCCATTATCTTTGGGAAGAAGTaGACTGAAGAATGCTGTTTCGATGGAGTGATGGTT | + |
Preference number: 6 (lower is better) Translates to: VVESESIIFGKK*TEECCFDGVMV Trigger: AACCATCACTCCATCGAAACAGCATTCTTCAGTCCACTTCTTCCCAAAGATAATGGATTCAGACTCCACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111708.9 ENSMUST00000149666.2 |
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CDS CAA 90 bp | TGGAAGAGACAGATGCTGTTATCCATCCAAACATGTGGTTTCTCATaGATGGGACCACCACTGAGCATCTTTCGAATTCAATGTCAGTCT | + |
Preference number: 6 (lower is better) Translates to: WKRQMLLSIQTCGFS*MGPPLSIFRIQCQS Trigger: AGACTGACATTGAATTCGAAAGATGCTCAGTGGTGGTCCCATCAATGAGAAACCACATGTTTGGATGGATAACAGCATCTGTCTCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS TCA 72 bp | TGGTACAAGGAGACTGCGTGTCCATTCACGTTTTGCTaGAGAATGTGGTTTCCAATCTCTACTTCCTTTTCA | + |
Preference number: 6 (lower is better) Translates to: WYKETACPFTFC*RMWFPISTSFS Trigger: TGAAAAGGAAGTAGAGATTGGAAACCACATTCTTCAGCAAAACGTGAATGGACACGCAGTCTCCTTGTACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CCA 72 bp | GCTATTTTAATTTCTCCGAGAGAACTGGATGTAAATTaGCCGACTTCCTCAAGGATCACAGAAAGGTGTTCG | + |
Preference number: 6 (lower is better) Translates to: AILISPRELDVN*PTSSRITERCS Trigger: CGAACACCTTTCTGTGATCCTTGAGGAAGTCGGCCAATTTACATCCAGTTCTCTCGGAGAAATTAAAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CAA 72 bp | TGGTTTCCAATCTCTACTTCCTTTTCATTGGAGGAGTaGACAAGCCTCACAAAGAGGCCCTTGATATTTACC | + |
Preference number: 6 (lower is better) Translates to: WFPISTSFSLEE*TSLTKRPLIFT Trigger: GGTAAATATCAAGGGCCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAAAGGAAGTAGAGATTGGAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | CAGATGCTGTTATCCATCCAAACATGTGGTTTCTCATaGATGGGACCACCACTGAGCATCTTTCGAATTCAA | + |
Preference number: 6 (lower is better) Translates to: QMLLSIQTCGFS*MGPPLSIFRIQ Trigger: TTGAATTCGAAAGATGCTCAGTGGTGGTCCCATCAATGAGAAACCACATGTTTGGATGGATAACAGCATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 72 bp | AGGGCGTTTTCTGTATTGGTTCTTCTTTCTCCTCGTTaGTGGAAGAGACAGATGCTGTTATCCATCCAAACA | + |
Preference number: 6 (lower is better) Translates to: RAFSVLVLLSPR*WKRQMLLSIQT Trigger: TGTTTGGATGGATAACAGCATCTGTCTCTTCCACAAACGAGGAGAAAGAAGAACCAATACAGAAAACGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | ATTTACCTCAGCTATTTTAATTTCTCCGAGAGAACTGGATGTAAATaGGCCGACTTCCTCAAGGATCACAGAAAGGTGTTCGCTCACGTT | + |
Preference number: 6 (lower is better) Translates to: IYLSYFNFSERTGCK*ADFLKDHRKVFAHV Trigger: AACGTGAGCGAACACCTTTCTGTGATCCTTGAGGAAGTCGGCCAATTTACATCCAGTTCTCTCGGAGAAATTAAAATAGCTGAGGTAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CAA 72 bp | TCATTGGAGGAGTTGACAAGCCTCACAAAGAGGCCCTaGATATTTACCTCAGCTATTTTAATTTCTCCGAGA | + |
Preference number: 6 (lower is better) Translates to: SLEELTSLTKRP*IFTSAILISPR Trigger: TCTCGGAGAAATTAAAATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGAGGCTTGTCAACTCCTCCAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 ENSMUST00000148739.8 |
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CDS CAA 90 bp | ACTTCCTTTTCATTGGAGGAGTTGACAAGCCTCACAAAGAGGCCCTaGATATTTACCTCAGCTATTTTAATTTCTCCGAGAGAACTGGAT | + |
Preference number: 6 (lower is better) Translates to: TSFSLEELTSLTKRP*IFTSAILISPRELD Trigger: ATCCAGTTCTCTCGGAGAAATTAAAATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAAAGGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111706.8 ENSMUST00000111708.9 |
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CDS CAA 90 bp | ACTTCCTTTTCATTGGAGGAGTTGACAAGCCTCACAAAGAGGCCCTaGATATTTACCTCAGCTATTTTAATTTCTCCGAGAGAACTGAGA | + |
Preference number: 6 (lower is better) Translates to: TSFSLEELTSLTKRP*IFTSAILISPRELR Trigger: TCTCAGTTCTCTCGGAGAAATTAAAATAGCTGAGGTAAATATCAAGGGCCTCTTTGTGAGGCTTGTCAACTCCTCCAATGAAAAGGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148739.8 |