Pregenerated sensors for LMNB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062075Ensembl transcript IDs: ENSMUST00000057623.14, ENSMUST00000105332.3, ENSMUST00000179022.8
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTGCGGGTTCCTAGCCCCAGGCCTCTATACCATCTTGACGGCATaGGGCCAGGTCAGGCCGGTGGGCAGAGGGCACCTCCATCTCGGA | + |
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Preference number: 1 (lower is better) Translates to: ACGFLAPGLYTILTA*GQVRPVGRGHLHLG Trigger: TCCGAGATGGAGGTGCCCTCTGCCCACCGGCCTGACCTGGCCCCATGCCGTCAAGATGGTATAGAGGCCTGGGGCTAGGAACCCGCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 90 bp | ACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTGGAGGTTaGTGGCAGTGGTGGCATCCTGTGGCCAAGAGCTCTTGCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: TEVSRSRRWLVGSGG*WQWWHPVAKSSCLG Trigger: CCCAAGGCAAGAGCTCTTGGCCACAGGATGCCACCACTGCCACCAACCTCCAGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 90 bp | TCTAGAAGCAGGAGGTGGCTGGTGGGTTCTGGAGGTTGGTGGCAGTaGTGGCATCCTGTGGCCAAGAGCTCTTGCCTTGGGGGAAGACTA | + |
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Preference number: 1 (lower is better) Translates to: SRSRRWLVGSGGWWQ*WHPVAKSSCLGGRL Trigger: TAGTCTTCCCCCAAGGCAAGAGCTCTTGGCCACAGGATGCCACCACTGCCACCAACCTCCAGAACCCACCAGCCACCTCCTGCTTCTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 90 bp | CGCCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTaGTGGGTTCTGGAGGTTGGTGGCAGTGGTGGCATCCTGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: RRSQRKRRYLEAGGG*WVLEVGGSGGILWP Trigger: TGGCCACAGGATGCCACCACTGCCACCAACCTCCAGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR TCA 90 bp | ACTCATGTGAGCAGTCACTGGCTGGGAACCTGCAGCCTTTGCTCCTaGAGGCACAACGCCCACGGTTTGCCTGTCCCCTTCAGTCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: THVSSHWLGTCSLCS*RHNAHGLPVPFSLR Trigger: CCTAAGACTGAAGGGGACAGGCAAACCGTGGGCGTTGTGCCTTCAGGAGCAAAGGCTGCAGGTTCCCAGCCAGTGACTGCTCACATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 90 bp | CGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTaGGTTCTGGAGGTTGGTGGCAGTGGTGGCATCCTGTGGCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RSQRKRRYLEAGGGW*VLEVGGSGGILWPR Trigger: TCTTGGCCACAGGATGCCACCACTGCCACCAACCTCCAGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR GCA 90 bp | TGCCTTGGGGGAAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTaGCAGGAGAGAGAAAGAACTCGCCCTAGCTCAGTAAAGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: CLGGRLGLDSSYHQL*QERERTRPSSVKEA Trigger: AGCTTCCTTTACTGAGCTAGGGCGAGTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTTCCCCCAAGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR GCA 90 bp | CATCTTATAAAAGAAACAATCTGTAGAGCTGAGCGATGTGCGCAGTaGCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCA | + |
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Preference number: 1 (lower is better) Translates to: HLIKETICRAERCAQ*RRLPSSSATPVTIS Trigger: TGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGCACATCGCTCAGCTCTACAGATTGTTTCTTTTATAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 90 bp | GGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACAAAGCTaGGCCATCCCTGGTTTCAGGTGCCATCAACTCCAGGAGAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GAGDCYKPFRFRAQS*AIPGFRCHQLQERR Trigger: CCTCCTCTCCTGGAGTTGATGGCACCTGAAACCAGGGATGGCCCAGCTTTGTGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 90 bp | GGCACCTCCATCTCGGAAACCCAGCAGAGCCCACCCACATTCTCATaGTTGCTTAACAGTCATCGAGAAACAGACCAAGGACTAGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GTSISETQQSPPTFS*LLNSHRETDQGLVR Trigger: TCTCACTAGTCCTTGGTCTGTTTCTCGATGACTGTTAAGCAACCATGAGAATGTGGGTGGGCTCTGCTGGGTTTCCGAGATGGAGGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR TCA 90 bp | TTGAACTTCGGACCTTCGGAAGAGCAGTCCGGTGCTCTTACCCACTaGGCCATCTTACCAGCCTGCTGCTCCTATCTTAATCTGAAGATC | + |
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Preference number: 1 (lower is better) Translates to: LNFGPSEEQSGALTH*AILPACCSYLNLKI Trigger: GATCTTCAGATTAAGATAGGAGCAGCAGGCTGGTAAGATGGCTCAGTGGGTAAGAGCACCGGACTGCTCTTCCGAAGGTCCGAAGTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
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| 3UTR TCA 90 bp | AAAGTTATACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTaGACTTCGGACCTTCGGAAGAGCAGTCCGGTGCTCTTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: KVIRMVVSHHVVAGI*TSDLRKSSPVLLPT Trigger: AGTGGGTAAGAGCACCGGACTGCTCTTCCGAAGGTCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGTATAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
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| 3UTR TCA 90 bp | CTAGTGGGCCCCACAGCACTCTTGGATTCTGAATTTGATTTGATTTaGAAGGCTTCAAAGAAAACAACTGAATCACCAGTTTCATACAAA | + |
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Preference number: 1 (lower is better) Translates to: LVGPTALLDSEFDLI*KASKKTTESPVSYK Trigger: TTTGTATGAAACTGGTGATTCAGTTGTTTTCTTTGAAGCCTTTCAAATCAAATCAAATTCAGAATCCAAGAGTGCTGTGGGGCCCACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CAA 90 bp | AGTCCCTCAGCCTGCGGGTTCCTAGCCCCAGGCCTCTATACCATCTaGACGGCATGGGGCCAGGTCAGGCCGGTGGGCAGAGGGCACCTC | + |
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Preference number: 2 (lower is better) Translates to: SPSACGFLAPGLYTI*TAWGQVRPVGRGHL Trigger: GAGGTGCCCTCTGCCCACCGGCCTGACCTGGCCCCATGCCGTCAAGATGGTATAGAGGCCTGGGGCTAGGAACCCGCAGGCTGAGGGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTTGGGGAGGTGACAGGTaGAACTGGCTGGCTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: AQCRRLPSSSATPVTISPWGGDR*NWLAPG Trigger: GCCAGGAGCCAGCCAGTTTCACCTGTCACCTCCCCA...AGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTAGCGCAAGGCAGCAGAGCTaGGCAGTGACTGCAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QCRRLPSSSATPVTISPSARQQS*AVTAAS Trigger: GCTGGCTGCAGTCACTGCGCAGCTCTGCTGCCTTGC...GCTAGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTGGTTCTGGAGGTTGGTaGCAGTGGTGGCATCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AQCRRLPSSSATPVTISPGSGGW*QWWHPV Trigger: CACAGGATGCCACCACTGCCACCAACCTCCAGAACC...AGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTTTCAGAGCACAAAGCTaGGCCATCCCTGGTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: AQCRRLPSSSATPVTISPFRAQS*AIPGFR Trigger: CCTGAAACCAGGGATGGCCCAGCTTTGTGCTCTGAA...AGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACGTGGCTGGTGGGTTCTaGAGGTTGGTGGCAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: ATPVTISPSQGQKQTPEDVAGGF*RLVAVV Trigger: CACCACTGCCACCAACCTCCAGAACCCACCAGCCAC...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CAA 90 bp | TGGCCACACTCATGTGAGCAGTCACTGGCTGGGAACCTGCAGCCTTaGCTCCTGAAGGCACAACGCCCACGGTTTGCCTGTCCCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: WPHSCEQSLAGNLQP*LLKAQRPRFACPLQ Trigger: CTGAAGGGGACAGGCAAACCGTGGGCGTTGTGCCTTCAGGAGCAAAGGCTGCAGGTTCCCAGCCAGTGACTGCTCACATGAGTGTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGACCAGAGAAGCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCCCAAGTCCCTCAGCCTaGGGGTTCCTAGCCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SGTREACECPGAGDCYKPPSPSA*GFLAPG Trigger: GCCTGGGGCTAGGAACCCGCAGGCTGAGGGACTTGG...GGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATGACCAGAGAAGCCTGTaGATGCCCTGGAGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SFQALPSRWGTEGPHSIHDQRSL*MPWSWG Trigger: TCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTC...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR TCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGTGCAGCCTTTGCTCCTaGAGGCACAACGCCCACGGT | + |
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Preference number: 2 (lower is better) Translates to: LSCREASFQALPSRWGTECSLCS*RHNAHG Trigger: ACCGTGGGCGTTGTGCCTTCAGGAGCAAAGGCTGCA...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACCATGTGAGCAGTCACTaGCTGGGAACCTGCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: ATPVTISPSQGQKQTPEDHVSSH*LGTCSL Trigger: AAGGCTGCAGGTTCCCAGCCAGTGACTGCTCACATG...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CAA 90 bp | GGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTaGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATACA | + |
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Preference number: 2 (lower is better) Translates to: GWLLALSCREASFQA*PSRWGTEGPHSIHT Trigger: TGTATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACCAAGTCCCTCAGCCTaGGGGTTCCTAGCCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: ACECPGAGDCYKPFRFRAPSPSA*GFLAPG Trigger: GCCTGGGGCTAGGAACCCGCAGGCTGAGGGACTTGG...TGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACACAGGTGAAACTGGCTaGCTCCTGGCACTAAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: ATPVTISPSQGQKQTPEDTGETG*LLALSC Trigger: GCAACTTAGTGCCAGGAGCCAGCCAGTTTCACCTGT...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR TCA 90 bp | CCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTGACCAGAGAAGCCTGTaGATGCCCTGGAGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PVTKKTEVSRSRRWLVGSDQRSL*MPWSWG Trigger: TCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTC...AGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTGGAGGTTGGCAGCTCCAGGCCTaGACCCCCAGAGCATCATCC | + |
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Preference number: 2 (lower is better) Translates to: TKKTEVSRSRRWLVGSGGWQLQA*TPRASS Trigger: GGATGATGCTCTGGGGGTTCAGGCCTGGAGCTGCCA...ACCTCCAGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GAGCTAGCAGCCATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGCCACCCACATTCTCATaGTTGCTTAACAGTCATCGA | + |
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Preference number: 2 (lower is better) Translates to: ELAAILLPQIQAQVPQPAPPTFS*LLNSHR Trigger: TCGATGACTGTTAAGCAACCATGAGAATGTGGGTGG...CGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATGGCTGCTAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCCATGTGAGCAGTCACTaGCTGGGAACCTGCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: WLAPGTKLQGSKFPGLAIHVSSH*LGTCSL Trigger: AAGGCTGCAGGTTCCCAGCCAGTGACTGCTCACATG...GATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGGGCCACACAGTATTCATACAGGAGAGGCCAGGAGCATAGCTAGTGTGAAGCTGGGCCATCCCTaGTTTCAGGTGCCATCAACT | + |
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Preference number: 2 (lower is better) Translates to: TEGPHSIHTGEARSIASVKLGHP*FQVPST Trigger: AGTTGATGGCACCTGAAACCAGGGATGGCCCAGCTT...CACACTAGCTATGCTCCTGGCCTCTCCTGTATGAATACTGTGTGGCCCCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGCCACCCACATTCTCATaGTTGCTTAACAGTCATCGA | + |
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Preference number: 2 (lower is better) Translates to: LSCREASFQALPSRWGTEPPTFS*LLNSHR Trigger: TCGATGACTGTTAAGCAACCATGAGAATGTGGGTGG...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGAGGTTGGTGGCAGTGGTaGCATCCTGTGGCCAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: EKVEHTFGMHLIKETICRGWWQW*HPVAKS Trigger: GCTCTTGGCCACAGGATGCCACCACTGCCACCAACC...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGAGTGGCTGGTGGGTTCTaGAGGTTGGTGGCAGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: EKVEHTFGMHLIKETICRVAGGF*RLVAVV Trigger: CACCACTGCCACCAACCTCCAGAACCCACCAGCCAC...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGAATCCCTGGTTTCAGGTaGCATCAACTCCAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: EKVEHTFGMHLIKETICRIPGFR*HQLQER Trigger: CCTCTCCTGGAGTTGATGGCACCTGAAACCAGGGAT...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGATTCAGAGCACAAAGCTaGGCCATCCCTGGTTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: EKVEHTFGMHLIKETICRFRAQS*AIPGFR Trigger: CCTGAAACCAGGGATGGCCCAGCTTTGTGCTCTGAA...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTAGCGGTGGGTTCTGGAGGTaGGTGGCAGTGGTGGCATCC | + |
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Preference number: 3 (lower is better) Translates to: QCRRLPSSSATPVTISPSGGFWR*VAVVAS Trigger: GGATGCCACCACTGCCACCAACCTCCAGAACCCACC...GCTAGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 72 bp | TTCCTAGCCCCAGGCCTCTATACCATCTTGACGGCATaGGGCCAGGTCAGGCCGGTGGGCAGAGGGCACCTC | + |
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Preference number: 3 (lower is better) Translates to: FLAPGLYTILTA*GQVRPVGRGHL Trigger: GAGGTGCCCTCTGCCCACCGGCCTGACCTGGCCCCATGCCGTCAAGATGGTATAGAGGCCTGGGGCTAGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CCA 72 bp | AGGTGGCTGGTGGGTTCTGGAGGTTGGTGGCAGTGGTaGCATCCTGTGGCCAAGAGCTCTTGCCTTGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: RWLVGSGGWWQW*HPVAKSSCLGG Trigger: TCCCCCAAGGCAAGAGCTCTTGGCCACAGGATGCCACCACTGCCACCAACCTCCAGAACCCACCAGCCACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR TCA 72 bp | CACCTGCCCTGTGGGCAAGGCAGCAGAGCTGCGCAGTaGCTGCAGCCAGCCATAACTATCCAGGATCCAACG | + |
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Preference number: 3 (lower is better) Translates to: HLPCGQGSRAAQ*LQPAITIQDPT Trigger: CGTTGGATCCTGGATAGTTATGGCTGGCTGCAGTCACTGCGCAGCTCTGCTGCCTTGCCCACAGGGCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR TCA 72 bp | GAGGGTCTGCCCTGTGTCCTAAGAGCCACCACATCCTaGCAGGCTAGTGGGCCCCACAGCACTCTTGGATTC | + |
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Preference number: 3 (lower is better) Translates to: EGLPCVLRATTS*QASGPHSTLGF Trigger: GAATCCAAGAGTGCTGTGGGGCCCACTAGCCTGTCAGGATGTGGTGGCTCTTAGGACACAGGGCAGACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR GCA 72 bp | AAAGAAACAATCTGTAGAGCTGAGCGATGTGCGCAGTaGCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTA | + |
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Preference number: 3 (lower is better) Translates to: KETICRAERCAQ*RRLPSSSATPV Trigger: TACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGCACATCGCTCAGCTCTACAGATTGTTTCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR TCA 72 bp | GAGGCCAGGAGCATAGCTAGTGTGGCCACACTCATGTaGGCAGTCACTGGCTGGGAACCTGCAGCCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: EARSIASVATLM*AVTGWEPAAFA Trigger: AGCAAAGGCTGCAGGTTCCCAGCCAGTGACTGCTCACATGAGTGTGGCCACACTAGCTATGCTCCTGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR GCA 72 bp | TTCAGAGCACAAAGCTGGGCCATCCCTGGTTTCAGGTaGCATCAACTCCAGGAGAGGAGGGTCTGCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FRAQSWAIPGFR*HQLQERRVCPV Trigger: CACAGGGCAGACCCTCCTCTCCTGGAGTTGATGGCACCTGAAACCAGGGATGGCCCAGCTTTGTGCTCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR CCA 72 bp | GCAGTGGTGGCATCCTGTGGCCAAGAGCTCTTGCCTTaGGGGAAGACTAGGCCTGGACTCTTCCTACCATCA | + |
|
Preference number: 3 (lower is better) Translates to: AVVASCGQELLP*GKTRPGLFLPS Trigger: TGATGGTAGGAAGAGTCCAGGCCTAGTCTTCCCCCAAGGCAAGAGCTCTTGGCCACAGGATGCCACCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR TCA 72 bp | CGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTaGACTTCGGACCTTCGGAAGAGCAGTCCGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RMVVSHHVVAGI*TSDLRKSSPVL Trigger: GAGCACCGGACTGCTCTTCCGAAGGTCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| 3UTR CCA 72 bp | ACCCTTCAGATTCAGAGCACAAAGCTGGGCCATCCCTaGTTTCAGGTGCCATCAACTCCAGGAGAGGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TLQIQSTKLGHP*FQVPSTPGEEG Trigger: ACCCTCCTCTCCTGGAGTTGATGGCACCTGAAACCAGGGATGGCCCAGCTTTGTGCTCTGAATCTGAAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR CCA 72 bp | TGTGTCAGTGGTGGGGAGGTGACAGGTGAAACTGGCTaGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: CVSGGEVTGETG*LLALSCREASF Trigger: GAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCAGTTTCACCTGTCACCTCCCCACCACTGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR TCA 72 bp | GGACCTTCGGAAGAGCAGTCCGGTGCTCTTACCCACTaGGCCATCTTACCAGCCTGCTGCTCCTATCTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: GPSEEQSGALTH*AILPACCSYLN Trigger: ATTAAGATAGGAGCAGCAGGCTGGTAAGATGGCTCAGTGGGTAAGAGCACCGGACTGCTCTTCCGAAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| 3UTR GCA 72 bp | GGAAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTaGCAGGAGAGAGAAAGAACTCGCCCTAGCTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GRLGLDSSYHQL*QERERTRPSSV Trigger: TACTGAGCTAGGGCGAGTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGCCCCACAGCACTCTaGGATTCTGAATTTGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSCREASFQALPSRWGTEGPTAL*DSEFDL Trigger: CAAATCAAATTCAGAATCCAAGAGTGCTGTGGGGCC...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR TCA 72 bp | AAAAATACCATGTGTCAGTGGTGGGGAGGTGACAGGTaGAACTGGCTGGCTCCTGGCACTAAGTTGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KNTMCQWWGGDR*NWLAPGTKLQG Trigger: TCCCTGCAACTTAGTGCCAGGAGCCAGCCAGTTTCACCTGTCACCTCCCCACCACTGACACATGGTATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR CCA 72 bp | ATCTCGGAAACCCAGCAGAGCCCACCCACATTCTCATaGTTGCTTAACAGTCATCGAGAAACAGACCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ISETQQSPPTFS*LLNSHRETDQG Trigger: TCCTTGGTCTGTTTCTCGATGACTGTTAAGCAACCATGAGAATGTGGGTGGGCTCTGCTGGGTTTCCGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR CCA 72 bp | AGTTATACGGATGGTTGTGAGCCACCATGTGGTTGCTaGTATTTGAACTTCGGACCTTCGGAAGAGCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SYTDGCEPPCGC*YLNFGPSEEQS Trigger: GGACTGCTCTTCCGAAGGTCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGTATAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| 3UTR-3UTR CAA 90 bp | AGTTATACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTGAACTTCGGAGCTCCTGGCACTAAGTaGCAGGGAAGCAAGTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SYTDGCEPPCGCWYLNFGAPGTK*QGSKFP Trigger: TGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGC...TCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGTATAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| 3UTR GCA 72 bp | AACAATTCAGAATCTGGGACCAGAGAAGCCTGTGAATaGCCTGGAGCTGGGGACTGTTATAAACCCTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NNSESGTREACE*PGAGDCYKPFR Trigger: TCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGATTCTGAATTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACAAAGGCCCCACAGCACTCTaGGATTCTGAATTTGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: VNALELGTVINPSDSEHKGPTAL*DSEFDL Trigger: CAAATCAAATTCAGAATCCAAGAGTGCTGTGGGGCC...TTTGTGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR TCA 72 bp | GAGCCATCTTACCAGCCTGCTGCTCCTATCTTAATCTaGAGATCTACTCTGAGGCTGCAGTTAAAGTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: EPSYQPAAPILI*RSTLRLQLKSM Trigger: CATTGACTTTAACTGCAGCCTCAGAGTAGATCTTCAGATTAAGATAGGAGCAGCAGGCTGGTAAGATGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR CCA 90 bp | GCGCAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTGCCGAGACAGACGCGTaGGCGACAGCGGCGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AQCRRLPSSSATPVTISPAETDA*ATAAWR Trigger: CCGCCACGCCGCTGTCGCCCACGCGTCTGTCTCGGC...AGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTAGCGCATGCGGGCCTCCTTaGGCTCCTCGCGGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QCRRLPSSSATPVTISPSACGPP*APRGLH Trigger: ATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGC...GCTAGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GCGCAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTTCTGCCAGCTGCTGCTaGATGGCGTCCCGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQCRRLPSSSATPVTISPSASCC*MASRTS Trigger: GGAGGTGCGGGACGCCATGCAGCAGCAGCTGGCAGA...AGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCCCAGGCCTCTATACCATCGGCCCTGCTTGTCACTaGGGGCTGTGGCCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGPSPSACGFLAPGLYTIGPACH*GLWPAQ Trigger: CTGAGCTGGCCACAGCCCTCAGTGACAAGCAGGGCC...GATGGTATAGAGGCCTGGGGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | GCGCAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTTCCTTCACTCGGCCCTaGGCCACTGTGAGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: AQCRRLPSSSATPVTISPSFTRP*ATVSSP Trigger: AGGTGAGCTCACAGTGGCCCAGGGCCGAGTGAAGGA...AGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTAGCTGGCCCGAGAGATGGTaGTCCGTGATGAAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCRRLPSSSATPVTISPSWPERW*SVMKGW Trigger: CCAGCCCTTCATCACGGATCACCATCTCTCGGGCCA...GCTAGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GCGCAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTACGGTCGATGTAGTGTaGCAGGCGGTCGTTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQCRRLPSSSATPVTISPTVDVV*QAVVEL Trigger: GAGCTCAACGACCGCCTGGCACACTACATCGACCGT...AGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATGCCGAGACAGACGCGTaGGCGACAGCGGCGTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFQALPSRWGTEGPHSIHAETDA*ATAAWR Trigger: CCGCCACGCCGCTGTCGCCCACGCGTCTGTCTCGGC...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCGTTGATGGGGGACTGTaGGTAGCCCCTGCGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSPAPDPGPSPSACGFLAVDGGL*VAPAPA Trigger: AGCTGGCGCAGGGGCTACCCACAGTCCCCCATCAAC...GGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCGGGTCCCCCTGCTGGTaGAAGAGGTCCTCTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: HSPAPDPGPSPSACGFLAGSPCW*KRSSSP Trigger: CGGTGAAGAGGACCTCTTCCACCAGCAGGGGGACCC...GGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | GAGCTAGCAGCCATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGCACTCACCTCGCGAGTaGTCACCTCCTCCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ELAAILLPQIQAQVPQPAHSPRE*SPPPSR Trigger: CCGAGAAGGAGGAGGTGACCACTCGCGAGGTGAGTG...CGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATGGCTGCTAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCCCAGGCCTCTATACCATCACGGTCGATGTAGTGTaGCAGGCGGTCGTTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGPSPSACGFLAPGLYTITVDVV*QAVVEL Trigger: GAGCTCAACGACCGCCTGGCACACTACATCGACCGT...GATGGTATAGAGGCCTGGGGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCACCAAGCGCCGCTCGTaGCTCCGTCGGGTCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: WLAPGTKLQGSKFPGLAITKRRS*LRRVSR Trigger: ACGGGAGACCCGACGGAGGCACGAGCGGCGCTTGGT...GATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACCGCTGCTGCTGCTGCTaGTCGATGTGGCCCGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATPVTISPSQGQKQTPEDRCCCC*SMWPER Trigger: TCTCTCGGGCCACATCGAGCAGCAGCAGCAGCAGCG...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTAGCAGCCATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGTCACTCTGGAAGCCCTaGTGGGTGAGCCTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELAAILLPQIQAQVPQPASLWKP*WVSLRC Trigger: ACACCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGA...CGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATGGCTGCTAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTAGCAGCCATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGCCCTGGACAGATGAGTaGTTTGCAGCCTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELAAILLPQIQAQVPQPAPWTDE*FAAFTA Trigger: GGCCGTGAAGGCTGCAAAGCACTCATCTGTCCAGGG...CGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATGGCTGCTAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCTGGCGTTGTCCAGCTTaGCCTGGTAGGTCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSPAPDPGPSPSACGFLAWRCPA*PGRSAP Trigger: TGGAGCAGACCTACCAGGCCAAGCTGGACAACGCCA...GGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCCGCTTGCCCCGGCCCTaGCCCACAGACATGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: WLAPGTKLQGSKFPGLAIRLPRP*PTDMPT Trigger: GGTTGGCATGTCTGTGGGCCAGGGCCGGGGCAAGCG...GATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCATCCCTGGTTTCAGGTGCCATCAACTCCAGGAGAGGAGGGTCTGCCCTCTGGAAGCCCTGCTaGGTGAGCCTGAGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGPSLVSGAINSRRGGSALWKPC*VSLRCP Trigger: AGGACACCTCAGGCTCACCCAGCAGGGCTTCCAGAG...GGCAGACCCTCCTCTCCTGGAGTTGATGGCACCTGAAACCAGGGATGGCCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGTGCCAGGCGGTCGTTaGGCTCACGGAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLAPGTKLQGSKFPGLAIVPGGR*AHGAPP Trigger: AGGAGGAGCTCCGTGAGCTCAACGACCGCCTGGCAC...GATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCCGGCGGCTCCCCAGCAGCAGTGCCACTCCGGTAACCATCTCACCTAGCTCTGCAGCACTGGCCTaGTTTTGGAGGCCTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QCRRLPSSSATPVTISPSSAALA*FWRPKS Trigger: GCTTTTAGGCCTCCAAAAGCAGGCCAGTGCTGCAGA...GCTAGGTGAGATGGTTACCGGAGTGGCACTGCTGCTGGGGAGCCGCCGGCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGTCTGCCAGCTGCTGCTaGATGGCGTCCCGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSCREASFQALPSRWGTESASCC*MASRTS Trigger: GGAGGTGCGGGACGCCATGCAGCAGCAGCTGGCAGA...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATCCTGGCCCACAGACATaGCAACCCCGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFQALPSRWGTEGPHSIHPGPQT*QPRCCC Trigger: GCAGCAGCAGCGGGGTTGGCATGTCTGTGGGCCAGG...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACCACTCACCTCGCGAGTaGTCACCTCCTCCTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATPVTISPSQGQKQTPEDHSPRE*SPPPSR Trigger: CCGAGAAGGAGGAGGTGACCACTCGCGAGGTGAGTG...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCCCAGGCCTCTATACCATCGGTTCTCTGCAGCACTaGCCTGCTTTTGGAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PGPSPSACGFLAPGLYTIGSLQH*PAFGGL Trigger: TAGGCCTCCAAAAGCAGGCCAGTGCTGCAGAGAACC...GATGGTATAGAGGCCTGGGGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | TCTGGGACCAGAGAAGCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCGGCCCTGCTTGTCACTaGGGGCTGTGGCCAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGTREACECPGAGDCYKPGPACH*GLWPAQ Trigger: CTGAGCTGGCCACAGCCCTCAGTGACAAGCAGGGCC...GGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTAGCAGCCATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGGGGCCTGAGCCATCTTaGAGTCATATTCCTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELAAILLPQIQAQVPQPAGPEPS*SHIPVA Trigger: GGCAACAGGAATATGACTTCAAGATGGCTCAGGCCC...CGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATGGCTGCTAGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATTACTCTGCCAGCTGCTaGTGCATGGCGTCCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SFQALPSRWGTEGPHSIHYSASC*CMASRT Trigger: GGTGCGGGACGCCATGCAGCAGCAGCTGGCAGAGTA...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGTTGATGGGGGACTGTaGGTAGCCCCTGCGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCREASFQALPSRWGTEVDGGL*VAPAPA Trigger: AGCTGGCGCAGGGGCTACCCACAGTCCCCCATCAAC...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATGGGTCCCCCTGCTGGTaGAAGAGGTCCTCTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SFQALPSRWGTEGPHSIHGSPCW*KRSSSP Trigger: CGGTGAAGAGGACCTCTTCCACCAGCAGGGGGACCC...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR CAA 72 bp | CTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTaGCCATCGAGGTGGGGCACAGAGGGGCCACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LALSCREASFQA*PSRWGTEGPHS Trigger: ACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | CCGGTGCTCTTACCCACTGAGCCATCTTACCAGCCTGCTGCTCCTATCTTAATCGGCCCTGGGCCACTGTaGGCTCACCTTCCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLLPTEPSYQPAAPILIGPGPL*AHLPAS Trigger: AGAAGCGGGAAGGTGAGCTCACAGTGGCCCAGGGCC...GATTAAGATAGGAGCAGCAGGCTGGTAAGATGGCTCAGTGGGTAAGAGCACCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR GCA 90 bp | GCTGGGCCATCCCTGGTTTCAGGTGCCATCAACTCCAGGAGAGGAGGGTCTGCCAAGTCATATTCCTGTTaGCGGCTGCTGTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPSLVSGAINSRRGGSAKSYSC*RLLSTS Trigger: GGAGGTGGACAGCAGCCGGCAACAGGAATATGACTT...GGCAGACCCTCCTCTCCTGGAGTTGATGGCACCTGAAACCAGGGATGGCCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGTCCTTCACTCGGCCCTaGGCCACTGTGAGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSCREASFQALPSRWGTESFTRP*ATVSSP Trigger: AGGTGAGCTCACAGTGGCCCAGGGCCGAGTGAAGGA...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGTCCTCCTGCAGGCTCTaGCATCGGTTCTCCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSCREASFQALPSRWGTESSCRL*HRFSRS Trigger: GGACCTGGAGAACCGATGCCAGAGCCTGCAGGAGGA...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACTCCAGCTCATGGATGTaGTTCTCTGCAGCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATPVTISPSQGQKQTPEDSSSWM*FSAALA Trigger: GGCCAGTGCTGCAGAGAACCACATCCATGAGCTGGA...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGGGCCACACAGTATTCATACAGGAGAGGCCAGGAGCATAGCTAGTGTGCCAGCTGCTGCTGCATaGCGTCCCGCACCTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEGPHSIHTGEARSIASVPAAAA*RPAPPS Trigger: TGACGGAGGTGCGGGACGCCATGCAGCAGCAGCTGG...CACACTAGCTATGCTCCTGGCCTCTCCTGTATGAATACTGTGTGGCCCCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | AAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTGCCAGGAGAGAGAAAGAACGTGCCAGGCGGTCGTTaGGCTCACGGAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTRPGLFLPSAVPGERKNVPGGR*AHGAPP Trigger: AGGAGGAGCTCCGTGAGCTCAACGACCGCCTGGCAC...GTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACCCAGAACCTGTCTCTTaGTCCTCCAGTTCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATPVTISPSQGQKQTPEDPEPVS*SSSSPK Trigger: CTTTGGGGAACTGGAGGATCAAGAGACAGGTTCTGG...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATATTCCTGTTGCCGGCTaGTGTCCACCTCCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFQALPSRWGTEGPHSIHIPVAG*CPPPPS Trigger: GCTTGGTGGAGGTGGACAGCAGCCGGCAACAGGAAT...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGGGCCACACAGTATTCATACAGGAGAGGCCAGGAGCATAGCTAGTGTGTACTCTGCCAGCTGCTaGTGCATGGCGTCCCGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TEGPHSIHTGEARSIASVYSASC*CMASRT Trigger: GGTGCGGGACGCCATGCAGCAGCAGCTGGCAGAGTA...CACACTAGCTATGCTCCTGGCCTCTCCTGTATGAATACTGTGTGGCCCCTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACCTGGCCCACAGACATaGCAACCCCGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACECPGAGDCYKPFRFRAPGPQT*QPRCCC Trigger: GCAGCAGCAGCGGGGTTGGCATGTCTGTGGGCCAGG...TGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCCCCTGGACAGATGAGTaGTTTGCAGCCTTCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLAPGTKLQGSKFPGLAIPWTDE*FAAFTA Trigger: GGCCGTGAAGGCTGCAAAGCACTCATCTGTCCAGGG...GATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCCACCTTCCCGCTTCTTaGCACTCTTCCTGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WLAPGTKLQGSKFPGLAIHLPAS*HSSWPP Trigger: AGGAGGCCAGGAAGAGTGCCAAGAAGCGGGAAGGTG...GATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATTGGCGTTGTCCAGCTTaGCCTGGTAGGTCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFQALPSRWGTEGPHSIHWRCPA*PGRSAP Trigger: TGGAGCAGACCTACCAGGCCAAGCTGGACAACGCCA...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTGAACTTCGGACCTTCGCCAGCTGCTGCTGCATaGCGTCCCGCACCTCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWYLNFGPSPAAAA*RPAPPS Trigger: TGACGGAGGTGCGGGACGCCATGCAGCAGCAGCTGG...CGAAGGTCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR CCA 90 bp | TCTGGGACCAGAGAAGCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCCTCTGGAAGCCCTGCTaGGTGAGCCTGAGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGTREACECPGAGDCYKPLWKPC*VSLRCP Trigger: AGGACACCTCAGGCTCACCCAGCAGGGCTTCCAGAG...GGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR CAA 72 bp | TCATGTGAGCAGTCACTGGCTGGGAACCTGCAGCCTTaGCTCCTGAAGGCACAACGCCCACGGTTTGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SCEQSLAGNLQP*LLKAQRPRFAC Trigger: ACAGGCAAACCGTGGGCGTTGTGCCTTCAGGAGCAAAGGCTGCAGGTTCCCAGCCAGTGACTGCTCACATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | CCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTTGGCCCGAGAGATGGTaGTCCGTGATGAAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVTKKTEVSRSRRWLVGSWPERW*SVMKGW Trigger: CCAGCCCTTCATCACGGATCACCATCTCTCGGGCCA...AGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACAGACTGGTCCTTGTCTaGAGAGTTCTTAAGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATPVTISPSQGQKQTPEDRLVLV*RVLKAH Trigger: GTGCGCCTTAAGAACTCTTCAGACAAGGACCAGTCT...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GGCACAGAGGGGCCACACAGTATTCATACAGGAGAGGCCAGGAGCATAGCTAGTTCACTCTGGAAGCCCTaGTGGGTGAGCCTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTEGPHSIHTGEARSIASSLWKP*WVSLRC Trigger: ACACCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGA...ACTAGCTATGCTCCTGGCCTCTCCTGTATGAATACTGTGTGGCCCCTCTGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGTCCAGCTCATGGATGTaGTTCTCTGCAGCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSCREASFQALPSRWGTESSSWM*FSAALA Trigger: GGCCAGTGCTGCAGAGAACCACATCCATGAGCTGGA...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | CCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTACTCGTACAGGGTCTTaGTGCCACTCACCTCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVTKKTEVSRSRRWLVGSTRTGS*CHSPRE Trigger: CTCGCGAGGTGAGTGGCATCAAGACCCTGTACGAGT...AGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGGGCCACACAGTATTCATACAGGAGAGGCCAGGAGCATAGCTAGTGTGCTAAAAGCTGGTAGCTaGGGGACTCCACGCGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TEGPHSIHTGEARSIASVLKAGS*GTPRAC Trigger: GCATGCGCGTGGAGTCCCTCAGCTACCAGCTTTTAG...CACACTAGCTATGCTCCTGGCCTCTCCTGTATGAATACTGTGTGGCCCCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | ACAACTGAATCACCAGTTTCATACAAAGTCCACCCTGAGCTAGCAGCCATTCTCACCAAGCGCCGCTCGTaGCTCCGTCGGGTCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TTESPVSYKVHPELAAILTKRRS*LRRVSR Trigger: ACGGGAGACCCGACGGAGGCACGAGCGGCGCTTGGT...GAGAATGGCTGCTAGCTCAGGGTGGACTTTGTATGAAACTGGTGATTCAGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTGAACTTCGGACCTTCGACTCGTACAGGGTCTTaGTGCCACTCACCTCGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWYLNFGPSTRTGS*CHSPRE Trigger: CTCGCGAGGTGAGTGGCATCAAGACCCTGTACGAGT...CGAAGGTCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR TCA 90 bp | CTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGACTCCGGTGAAACAGTaGTTCCAGATCCTTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSCREASFQALPSRWGTETPVKQ*FQILHS Trigger: CGAGTGAAGGATCTGGAATCACTGTTTCACCGGAGT...CTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTGCCAGGAGAGAGAAAGAACTCTGTCTCCAGGCCCTaGTTGTCACTGAGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KTRPGLFLPSAVPGERKNSVSRP*LSLRAV Trigger: CACAGCCCTCAGTGACAAGCAGGGCCTGGAGACAGA...GTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTGCCAGGAGAGAGAAAGAACAAAGCCAGCTCCTCCTaGAGGCTCTGGCATCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTRPGLFLPSAVPGERKNKASSS*RLWHRF Trigger: GAACCGATGCCAGAGCCTGCAGGAGGAGCTGGCTTT...GTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | CCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTTCTTGGCACTCTTCCTaGCCTCCTCTAGCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVTKKTEVSRSRRWLVGSSWHSS*PPLAQP Trigger: AGGCTGAGCTAGAGGAGGCCAGGAAGAGTGCCAAGA...AGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTGCCAGGAGAGAGAAAGAACCACCTTCCCGCTTCTTaGCACTCTTCCTGGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTRPGLFLPSAVPGERKNHLPAS*HSSWPP Trigger: AGGAGGCCAGGAAGAGTGCCAAGAAGCGGGAAGGTG...GTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| 3UTR CAA 72 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTaGAACTTCGGACCTTCGGAAGAGCAGTCCGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWY*NFGPSEEQSGA Trigger: AGCACCGGACTGCTCTTCCGAAGGTCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR GCA 90 bp | CCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTAAGTCATATTCCTGTTaGCGGCTGCTGTCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVTKKTEVSRSRRWLVGSKSYSC*RLLSTS Trigger: GGAGGTGGACAGCAGCCGGCAACAGGAATATGACTT...AGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | AGTTATACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTGAACTTCGGACGCTGCTGCTGCTGCTaGTCGATGTGGCCCGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYTDGCEPPCGCWYLNFGRCCCC*SMWPER Trigger: TCTCTCGGGCCACATCGAGCAGCAGCAGCAGCAGCG...TCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGTATAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR GCA 90 bp | AGTTATACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTGAACTTCGGATGCCAACCCCGCTGCTaGTGCTGCTGCTCGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYTDGCEPPCGCWYLNFGCQPRC*CCCSMW Trigger: CCACATCGAGCAGCAGCAGCAGCAGCGGGGTTGGCA...TCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGTATAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR CCA 90 bp | ACGGATGGTTGTGAGCCACCATGTGGTTGCTGGTATTTGAACTTCGGACCTTCGGACCATCTTCTGCCTTaGCCAGCTGTGCTCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWYLNFGPSDHLLP*PAVLEA Trigger: AGCTTCGAGCACAGCTGGCCAAGGCAGAAGATGGTC...CGAAGGTCCGAAGTTCAAATACCAGCAACCACATGGTGGCTCACAACCATCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTGGAGGTGGTTCTCTGCAGCACTaGCCTGCTTTTGGAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TKKTEVSRSRRWLVGSGGGSLQH*PAFGGL Trigger: TAGGCCTCCAAAAGCAGGCCAGTGCTGCAGAGAACC...ACCTCCAGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | AAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTGCCAGGAGAGAGAAAGAACGGGCCTGAGCCATCTTaGAGTCATATTCCTGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTRPGLFLPSAVPGERKNGPEPS*SHIPVA Trigger: GGCAACAGGAATATGACTTCAAGATGGCTCAGGCCC...GTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACAAAATTCCTGTTGCCGGCTaGTGTCCACCTCCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VNALELGTVINPSDSEHKIPVAG*CPPPPS Trigger: GCTTGGTGGAGGTGGACAGCAGCCGGCAACAGGAAT...TTTGTGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCATCTGCAGCACTGGCCTaGTTTTGGAGGCCTAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACECPGAGDCYKPFRFRASAALA*FWRPKS Trigger: GCTTTTAGGCCTCCAAAAGCAGGCCAGTGCTGCAGA...TGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCAAGACTGGTCCTTGTCTaGAGAGTTCTTAAGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACECPGAGDCYKPFRFRARLVLV*RVLKAH Trigger: GTGCGCCTTAAGAACTCTTCAGACAAGGACCAGTCT...TGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR GCA 90 bp | TCTGGGACCAGAGAAGCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTCCTCTAGCTCAGCCTaGACCTTTCCAATTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: SGTREACECPGAGDCYKPSSSSA*TFPISI Trigger: GATTGAAATTGGAAAGGTGCAGGCTGAGCTAGAGGA...GGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGAGCATGCGGGCCTCCTTaGGCTCCTCGCGGGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EKVEHTFGMHLIKETICRACGPP*APRGLH Trigger: ATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGC...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCATCTCCAACTGCTTCTTaGCCACAGCATGACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ACECPGAGDCYKPFRFRASPTAS*PQHDHL Trigger: AAGATGGTCATGCTGTGGCCAAGAAGCAGTTGGAGA...TGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACAGTTCCCCAAAGACTaGTCCTTGTCTGAAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACECPGAGDCYKPFRFRAQFPKD*SLSEEF Trigger: GAACTCTTCAGACAAGGACCAGTCTTTGGGGAACTG...TGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| 3UTR CAA 72 bp | TCGGAAACCCAGCAGAGCCCACCCACATTCTCATGGTaGCTTAACAGTCATCGAGAAACAGACCAAGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: SETQQSPPTFSW*LNSHRETDQGL Trigger: TAGTCCTTGGTCTGTTTCTCGATGACTGTTAAGCAACCATGAGAATGTGGGTGGGCTCTGCTGGGTTTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR CCA 90 bp | ATCTCGGAAACCCAGCAGAGCCCACCCACATTCTCATGGTTGCTTAACAGTCATCAGTTCCCCAAAGACTaGTCCTTGTCTGAAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISETQQSPPTFSWLLNSHQFPKD*SLSEEF Trigger: GAACTCTTCAGACAAGGACCAGTCTTTGGGGAACTG...ATGACTGTTAAGCAACCATGAGAATGTGGGTGGGCTCTGCTGGGTTTCCGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR TCA 90 bp | ACAACTGAATCACCAGTTTCATACAAAGTCCACCCTGAGCTAGCAGCCATTCTCACTCCGGTGAAACAGTaGTTCCAGATCCTTCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: TTESPVSYKVHPELAAILTPVKQ*FQILHS Trigger: CGAGTGAAGGATCTGGAATCACTGTTTCACCGGAGT...GAGAATGGCTGCTAGCTCAGGGTGGACTTTGTATGAAACTGGTGATTCAGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR GCA 90 bp | GAAAGGCTTCAAAGAAAACAACTGAATCACCAGTTTCATACAAAGTCCACCCTGAAAGCCAGCTCCTCCTaGAGGCTCTGGCATCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERLQRKQLNHQFHTKSTLKASSS*RLWHRF Trigger: GAACCGATGCCAGAGCCTGCAGGAGGAGCTGGCTTT...CAGGGTGGACTTTGTATGAAACTGGTGATTCAGTTGTTTTCTTTGAAGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR GCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGATGCCAACCCCGCTGCTaGTGCTGCTGCTCGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKVEHTFGMHLIKETICRCQPRC*CCCSMW Trigger: CCACATCGAGCAGCAGCAGCAGCAGCGGGGTTGGCA...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR CCA 90 bp | GTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACAAATCTCCAACTGCTTCTTaGCCACAGCATGACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VNALELGTVINPSDSEHKSPTAS*PQHDHL Trigger: AAGATGGTCATGCTGTGGCCAAGAAGCAGTTGGAGA...TTTGTGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR GCA 90 bp | GTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACAAATCCTCTAGCTCAGCCTaGACCTTTCCAATTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: VNALELGTVINPSDSEHKSSSSA*TFPISI Trigger: GATTGAAATTGGAAAGGTGCAGGCTGAGCTAGAGGA...TTTGTGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR TCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGACTAAAAGCTGGTAGCTaGGGGACTCCACGCGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EKVEHTFGMHLIKETICRLKAGS*GTPRAC Trigger: GCATGCGCGTGGAGTCCCTCAGCTACCAGCTTTTAG...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR CCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGAGACCATCTTCTGCCTTaGCCAGCTGTGCTCGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EKVEHTFGMHLIKETICRDHLLP*PAVLEA Trigger: AGCTTCGAGCACAGCTGGCCAAGGCAGAAGATGGTC...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR TCA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGACCAGAACCTGTCTCTTaGTCCTCCAGTTCCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EKVEHTFGMHLIKETICRPEPVS*SSSSPK Trigger: CTTTGGGGAACTGGAGGATCAAGAGACAGGTTCTGG...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS CCA 90 bp | GCGTGGCGGGCCCCGCGTGGGGCGGCAGAGACGCCATGGCGGAGGTaGCGGCGGCGGGAGAATCACCTCGGTTGCCCGAATGCGGCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AWRAPRGAAETPWRR*RRRENHLGCPNAAR Trigger: GCGCGCCGCATTCGGGCAACCGAGGTGATTCTCCCGCCGCCGCCACCTCCGCCATGGCGTCTCTGCCGCCCCACGCGGGGCCCGCCACGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
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| CDS GCA 90 bp | CAGTCTCCAGCCGCCGGCGCTTGCCCCGGCCCTGGCCCACAGACATaGCAACCCCGCTGCTGCTGCTGCTGCTCGATGTGGCCCGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSPAAGACPGPGPQT*QPRCCCCCSMWPER Trigger: TCTCTCGGGCCACATCGAGCAGCAGCAGCAGCAGCGGGGTTGGCATGTCTGTGGGCCAGGGCCGGGGCAAGCGCCGGCGGCTGGAGACTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | CAGTCTGCTGAGCCAGGCGGGAGCCGCTGCTCACTCTGGAAGCCCTaGTGGGTGAGCCTGAGGTGTCCTCAGTCTCCAGCCGCCGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSAEPGGSRCSLWKP*WVSLRCPQSPAAGA Trigger: AGCGCCGGCGGCTGGAGACTGAGGACACCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTCAGCAGACTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS CCA 90 bp | TCTGCTGAGCCAGGCGGGAGCCGCTGCTCACTCTGGAAGCCCTGCTaGGTGAGCCTGAGGTGTCCTCAGTCTCCAGCCGCCGGCGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SAEPGGSRCSLWKPC*VSLRCPQSPAAGAC Trigger: GCAAGCGCCGGCGGCTGGAGACTGAGGACACCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTCAGCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | GAGCTCCGGCAGAGCTCCCTCCACGGTCTCCATCAAAGGGCGGGCTaGCTCCGGGCAGTCCCTCCCGCATCCCTCTCCAGTGCCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ELRQSSLHGLHQRAG*LRAVPPASLSSASH Trigger: ATGAGAGGCACTGGAGAGGGATGCGGGAGGGACTGCCCGGAGGCAGCCCGCCCTTTGATGGAGACCGTGGAGGGAGCTCTGCCGGAGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105332.3 |
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| CDS TCA 90 bp | GCCCCCTCGGACGTCGTTTCACATACTCCCTCAGAGGCCTCCCTCTaGGCTCCGGCAGAGCTCCCTCCACGGTCTCCATCAAAGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: APSDVVSHTPSEASL*APAELPPRSPSKGG Trigger: CCCGCCCTTTGATGGAGACCGTGGAGGGAGCTCTGCCGGAGCTCAGAGGGAGGCCTCTGAGGGAGTATGTGAAACGACGTCCGAGGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105332.3 |
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| CDS GCA 90 bp | GAGGGACTCCACGCGCATGCGGGCCTCCTTGAGCTCCTCGCGGGCTaGATGGGCTGCCTTGTCATTCTGGTCCGAGAGCAGCTTGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGLHAHAGLLELLAG*MGCLVILVREQLGV Trigger: AACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCGCGTGGAGTCCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | TCACAACACCCGTGGCCACAGTCTGCTGAGCCAGGCGGGAGCCGCTaGTCACTCTGGAAGCCCTGCTGGGTGAGCCTGAGGTGTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQHPWPQSAEPGGSR*SLWKPCWVSLRCPQ Trigger: CTGAGGACACCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTCAGCAGACTGTGGCCACGGGTGTTGTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | TATTCCTGTTGCCGGCTGCTGTCCACCTCCACCAAGCGCCGCTCGTaGCTCCGTCGGGTCTCCCGTACCTCCTGCTCTCTTGTGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: YSCCRLLSTSTKRRS*LRRVSRTSCSLVGT Trigger: GGTCCCCACAAGAGAGCAGGAGGTACGGGAGACCCGACGGAGGCACGAGCGGCGCTTGGTGGAGGTGGACAGCAGCCGGCAACAGGAATA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105332.3 |
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| CDS CCA 90 bp | GACTCCACGCGCATGCGGGCCTCCTTGAGCTCCTCGCGGGCTGCATaGGCTGCCTTGTCATTCTGGTCCGAGAGCAGCTTGGCGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSTRMRASLSSSRAA*AALSFWSESSLALS Trigger: GGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCGCGTGGAGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | CATTCTCCTGCCCCAGATCCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCTGTGCCAGGCGGTCGTaGAGCTCACGGAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSPAPDPGPSPSACGFLACARRS*SSRSSS Trigger: GGAGGAGCTCCGTGAGCTCAACGACCGCCTGGCACA...GGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGGATCTGGGGCAGGAGAATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS TCA 90 bp | ATGAGTGCTTTGCAGCCTTCACGGCCACCTCCTCACCGTCGGCACTaGCCAGGGCAGTGCGGAAGCTCTCCCCAGGGCCCCAGTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSALQPSRPPPHRRH*PGQCGSSPQGPSWS Trigger: AGACCAACTGGGGCCCTGGGGAGAGCTTCCGCACTGCCCTGGTCAGTGCCGACGGTGAGGAGGTGGCCGTGAAGGCTGCAAAGCACTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | CACGCGCATGCGGGCCTCCTTGAGCTCCTCGCGGGCTGCATGGGCTaGCTTGTCATTCTGGTCCGAGAGCAGCTTGGCGTTGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HAHAGLLELLAGCMG*LVILVREQLGVVQL Trigger: AAGCTGGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCGCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | GCTGGGCCATCCCTGGTTTCAGGTGCCATCAACTCCAGGAGAGGAGGGTCTGCCGGAGAATCACCTCGGTaGCCCGAATGCGGCGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGPSLVSGAINSRRGGSAGESPR*PECGAL Trigger: GAGCGCGCCGCATTCGGGCAACCGAGGTGATTCTCC...GGCAGACCCTCCTCTCCTGGAGTTGATGGCACCTGAAACCAGGGATGGCCCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
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| CDS-3UTR CAA 90 bp | CCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCCCAGGCCTCTATACCATCGCTGCATGGGCTGCCTaGTCATTCTGGTCCGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPSPSACGFLAPGLYTIAAWAA*SFWSES Trigger: GCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGC...GATGGTATAGAGGCCTGGGGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS TCA 90 bp | TTCACGGGCCGTCTCATCCAGTACCCGTCGGGCGTCAGCCAGCTCTaGCTCGTACAGGGTCTTGATGCCACTCACCTCGCGAGTGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: FTGRLIQYPSGVSQL*LVQGLDATHLASGH Trigger: GTGACCACTCGCGAGGTGAGTGGCATCAAGACCCTGTACGAGTCAGAGCTGGCTGACGCCCGACGGGTACTGGATGAGACGGCCCGTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | TATTCCTGTTGCCGGCTGCTGTCCACCTCCACCAAGCGCCGCTCGTaGCTCCGTCGGGTCTCCCGTACCTCCTCCTCAAACACACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YSCCRLLSTSTKRRS*LRRVSRTSSSNTLL Trigger: CAAGAGTGTGTTTGAGGAGGAGGTACGGGAGACCCGACGGAGGCACGAGCGGCGCTTGGTGGAGGTGGACAGCAGCCGGCAACAGGAATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS CCA 90 bp | CGCGGGCTGCATGGGCTGCCTTGTCATTCTGGTCCGAGAGCAGCTTaGCGTTGTCCAGCTTGGCCTGGTAGGTCTGCTCCAGTTCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLHGLPCHSGPRAA*RCPAWPGRSAPVLP Trigger: GGGTAGAACTGGAGCAGACCTACCAGGCCAAGCTGGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | CCAGGCCCAAGTCCCTCAGCCTGCGGGTTCCTAGCCCCAGGCCTCTATACCATCGGACAGATGAGTGCTTaGCAGCCTTCACGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PGPSPSACGFLAPGLYTIGQMSA*QPSRPP Trigger: AGGTGGCCGTGAAGGCTGCAAAGCACTCATCTGTCC...GATGGTATAGAGGCCTGGGGCTAGGAACCCGCAGGCTGAGGGACTTGGGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS TCA 90 bp | CCCTGCTTGTCACTGAGGGCTGTGGCCAGCTCAGCCTCACTCCGGTaGAACAGTGATTCCAGATCCTTCACTCGGCCCTGGGCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PCLSLRAVASSASLR*NSDSRSFTRPWATV Trigger: CACAGTGGCCCAGGGCCGAGTGAAGGATCTGGAATCACTGTTTCACCGGAGTGAGGCTGAGCTGGCCACAGCCCTCAGTGACAAGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | CACAGCATGACCATCTTCTGCCTTGGCCAGCTGTGCTCGAAGCTCTaGCACCTCTGTCTCCAGGCCCTGCTTGTCACTGAGGGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HSMTIFCLGQLCSKL*HLCLQALLVTEGCG Trigger: GCCACAGCCCTCAGTGACAAGCAGGGCCTGGAGACAGAGGTGGCAGAGCTTCGAGCACAGCTGGCCAAGGCAGAAGATGGTCATGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS TCA 90 bp | GCTCATCGTGCTGACTGCGCAGGTCCTCCAGGGCCTGAGCCATCTTaGAGTCATATTCCTGTTGCCGGCTGCTGTCCACCTCCACCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AHRADCAGPPGPEPS*SHIPVAGCCPPPPS Trigger: GCTTGGTGGAGGTGGACAGCAGCCGGCAACAGGAATATGACTTCAAGATGGCTCAGGCCCTGGAGGACCTGCGCAGTCAGCACGATGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | GGCACAGAGGGGCCACACAGTATTCATACAGGAGAGGCCAGGAGCATAGCTAGTTGTGCCAGGCGGTCGTaGAGCTCACGGAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTEGPHSIHTGEARSIASCARRS*SSRSSS Trigger: GGAGGAGCTCCGTGAGCTCAACGACCGCCTGGCACA...ACTAGCTATGCTCCTGGCCTCTCCTGTATGAATACTGTGTGGCCCCTCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | AAGACTAGGCCTGGACTCTTCCTACCATCAGCTGTGCCAGGAGAGAGAAAGAACCGCATGCGGGCCTCCTaGAGCTCCTCGCGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KTRPGLFLPSAVPGERKNRMRAS*SSSRAA Trigger: TGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCG...GTTCTTTCTCTCTCCTGGCACAGCTGATGGTAGGAAGAGTCCAGGCCTAGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | GCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTCAGATTCAGAGCACGCATGCGGGCCTCCTaGAGCTCCTCGCGGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ACECPGAGDCYKPFRFRARMRAS*SSSRAA Trigger: TGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCG...TGCTCTGAATCTGAAGGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | CTGCTTCTTGGCCACAGCATGACCATCTTCTGCCTTGGCCAGCTGTaGTCGAAGCTCTGCCACCTCTGTCTCCAGGCCCTGCTTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLLGHSMTIFCLGQL*SKLCHLCLQALLVT Trigger: AGTGACAAGCAGGGCCTGGAGACAGAGGTGGCAGAGCTTCGAGCACAGCTGGCCAAGGCAGAAGATGGTCATGCTGTGGCCAAGAAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS GCA 90 bp | CGTACCTCCTCCTCAAACACACTCTTGCTGAAAGCCAGCTCCTCCTaGAGGCTCTGGCATCGGTTCTCCAGGTCCACACGCATCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTSSSNTLLLKASSS*RLWHRFSRSTRISV Trigger: GACGCTGATGCGTGTGGACCTGGAGAACCGATGCCAGAGCCTGCAGGAGGAGCTGGCTTTCAGCAAGAGTGTGTTTGAGGAGGAGGTACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS CCA 90 bp | CTGCCTTGTCATTCTGGTCCGAGAGCAGCTTGGCGTTGTCCAGCTTaGCCTGGTAGGTCTGCTCCAGTTCTACCCGGTACAGGCGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: LPCHSGPRAAWRCPA*PGRSAPVLPGTGAL Trigger: AAGTGCGCCTGTACCGGGTAGAACTGGAGCAGACCTACCAGGCCAAGCTGGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS CCA 90 bp | CACATCAGTCGGCAGCCCCTTGAGGTAGTCCTTGGGTCCCCCTGCTaGTGGAAGAGGTCCTCTTCACCGAATTCTGCCTCTTCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HISRQPLEVVLGSPC*WKRSSSPNSASSSS Trigger: GGAAGAGGAAGAGGCAGAATTCGGTGAAGAGGACCTCTTCCACCAGCAGGGGGACCCAAGGACTACCTCAAGGGGCTGCCGACTGATGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACGAAGTCATATTCCTGTaGCCGGCTGCTGTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATPVTISPSQGQKQTPEDEVIFL*PAAVHL Trigger: GAGGTGGACAGCAGCCGGCAACAGGAATATGACTTC...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGACCAGAGAAGCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTGGTCCGAGAGCAGCTaGGCGTTGTCCAGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGTREACECPGAGDCYKPWSESS*ALSSLA Trigger: GGCCAAGCTGGACAACGCCAAGCTGCTCTCGGACCA...GGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS TCA 90 bp | GGTGAAACAGTGATTCCAGATCCTTCACTCGGCCCTGGGCCACTGTaGGCTCACCTTCCCGCTTCTTGGCACTCTTCCTGGCCTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GETVIPDPSLGPGPL*AHLPASWHSSWPPL Trigger: TAGAGGAGGCCAGGAAGAGTGCCAAGAAGCGGGAAGGTGAGCTCACAGTGGCCCAGGGCCGAGTGAAGGATCTGGAATCACTGTTTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
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| CDS-3UTR CAA 90 bp | AGTTTCCAGGCCTTGCCATCGAGGTGGGGCACAGAGGGGCCACACAGTATTCATGACTCGTACAGGGTCTaGATGCCACTCACCTCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SFQALPSRWGTEGPHSIHDSYRV*MPLTSR Trigger: TCGCGAGGTGAGTGGCATCAAGACCCTGTACGAGTC...ATGAATACTGTGTGGCCCCTCTGTGCCCCACCTCGATGGCAAGGCCTGGAAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | GCCACTCCGGTAACCATCTCACCTAGCCAGGGCCAGAAACAGACCCCTGAGGACTCCTCAAACACACTCTaGCTGAAAGCCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ATPVTISPSQGQKQTPEDSSNTL*LKASSS Trigger: GGAGGAGCTGGCTTTCAGCAAGAGTGTGTTTGAGGA...GTCCTCAGGGGTCTGTTTCTGGCCCTGGCTAGGTGAGATGGTTACCGGAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGCTCCTGGCACTAAGTTGCAGGGAAGCAAGTTTCCAGGCCTTGCCATCGAAGTCATATTCCTGTaGCCGGCTGCTGTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLAPGTKLQGSKFPGLAIEVIFL*PAAVHL Trigger: GAGGTGGACAGCAGCCGGCAACAGGAATATGACTTC...GATGGCAAGGCCTGGAAACTTGCTTCCCTGCAACTTAGTGCCAGGAGCCAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTGGAGGTTGGTCCGAGAGCAGCTaGGCGTTGTCCAGCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKKTEVSRSRRWLVGSGGWSESS*ALSSLA Trigger: GGCCAAGCTGGACAACGCCAAGCTGCTCTCGGACCA...ACCTCCAGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGACCAGAGAAGCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCTTAGCGTCCAGCATCTaGCGGAACTTGTCACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGTREACECPGAGDCYKPLASSI*RNLSRS Trigger: GGAGCGTGACAAGTTCCGCAAGATGCTGGACGCTAA...GGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGAGGGGCCACACAGTATTCATACAGGAGAGGCCAGGAGCATAGCTAGTAATGTCCAGCAGCTCTaGGTACTCTGCCAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTEGPHSIHTGEARSIASNVQQL*VLCQLL Trigger: CAGCAGCTGGCAGAGTACCAAGAGCTGCTGGACATT...ACTAGCTATGCTCCTGGCCTCTCCTGTATGAATACTGTGTGGCCCCTCTGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS TCA 90 bp | AACCTGTCTCTTGATCCTCCAGTTCCCCAAAGACTGGTCCTTGTCTaGAGAGTTCTTAAGGCGCACGAACCTGCCCTCTGGGTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: NLSLDPPVPQRLVLV*RVLKAHEPALWVHL Trigger: GAGGTGGACCCAGAGGGCAGGTTCGTGCGCCTTAAGAACTCTTCAGACAAGGACCAGTCTTTGGGGAACTGGAGGATCAAGAGACAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | CCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTTTAGCGTCCAGCATCTaGCGGAACTTGTCACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVTKKTEVSRSRRWLVGSLASSI*RNLSRS Trigger: GGAGCGTGACAAGTTCCGCAAGATGCTGGACGCTAA...AGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | CCGGTCACAAAGAAAACGGAGGTATCTAGAAGCAGGAGGTGGCTGGTGGGTTCTAATGTCCAGCAGCTCTaGGTACTCTGCCAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVTKKTEVSRSRRWLVGSNVQQL*VLCQLL Trigger: CAGCAGCTGGCAGAGTACCAAGAGCTGCTGGACATT...AGAACCCACCAGCCACCTCCTGCTTCTAGATACCTCCGTTTTCTTTGTGACCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS CCA 90 bp | TCACCCTCCAGAACCTGTCTCTTGATCCTCCAGTTCCCCAAAGACTaGTCCTTGTCTGAAGAGTTCTTAAGGCGCACGAACCTGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSRTCLLILQFPKD*SLSEEFLRRTNLPS Trigger: AGAGGGCAGGTTCGTGCGCCTTAAGAACTCTTCAGACAAGGACCAGTCTTTGGGGAACTGGAGGATCAAGAGACAGGTTCTGGAGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | CCGGTGCTCTTACCCACTGAGCCATCTTACCAGCCTGCTGCTCCTATCTTAATCTCCTCAAACACACTCTaGCTGAAAGCCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVLLPTEPSYQPAAPILISSNTL*LKASSS Trigger: GGAGGAGCTGGCTTTCAGCAAGAGTGTGTTTGAGGA...GATTAAGATAGGAGCAGCAGGCTGGTAAGATGGCTCAGTGGGTAAGAGCACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS-3UTR CAA 90 bp | ACAACTGAATCACCAGTTTCATACAAAGTCCACCCTGAGCTAGCAGCCATTCTCGCTGCATGGGCTGCCTaGTCATTCTGGTCCGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTESPVSYKVHPELAAILAAWAA*SFWSES Trigger: GCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGC...GAGAATGGCTGCTAGCTCAGGGTGGACTTTGTATGAAACTGGTGATTCAGTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | TCTGGGACCAGAGAAGCCTGTGAATGCCCTGGAGCTGGGGACTGTTATAAACCCCCCAAAGACTGGTCCTaGTCTGAAGAGTTCTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGTREACECPGAGDCYKPPKDWS*SEEFLR Trigger: CCTTAAGAACTCTTCAGACAAGGACCAGTCTTTGGG...GGGTTTATAACAGTCCCCAGCTCCAGGGCATTCACAGGCTTCTCTGGTCCCAGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCTTCAAAGAAAACAACTGAATCACCAGTTTCATACAAAGTCCACCCTGGACTCGTACAGGGTCTaGATGCCACTCACCTCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ERLQRKQLNHQFHTKSTLDSYRV*MPLTSR Trigger: TCGCGAGGTGAGTGGCATCAAGACCCTGTACGAGTC...CAGGGTGGACTTTGTATGAAACTGGTGATTCAGTTGTTTTCTTTGAAGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAGGTGGAACACACGTTTGGCATGCATCTTATAAAAGAAACAATCTGTAGAGGACAGATGAGTGCTTaGCAGCCTTCACGGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: EKVEHTFGMHLIKETICRGQMSA*QPSRPP Trigger: AGGTGGCCGTGAAGGCTGCAAAGCACTCATCTGTCC...TCTACAGATTGTTTCTTTTATAAGATGCATGCCAAACGTGTGTTCCACCTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | GCGTGGCGGGCCCCGCGTGGGGCGGCAGAGACGCCATaGCGGAGGTGGCGGCGGCGGGAGAATCACCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AWRAPRGAAETP*RRWRRRENHLG Trigger: ACCGAGGTGATTCTCCCGCCGCCGCCACCTCCGCCATGGCGTCTCTGCCGCCCCACGCGGGGCCCGCCACGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS GCA 72 bp | GCCGCCGGCGCTTGCCCCGGCCCTGGCCCACAGACATaGCAACCCCGCTGCTGCTGCTGCTGCTCGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGACPGPGPQT*QPRCCCCCSMW Trigger: CCACATCGAGCAGCAGCAGCAGCAGCGGGGTTGGCATGTCTGTGGGCCAGGGCCGGGGCAAGCGCCGGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | GCCCCGCGTGGGGCGGCAGAGACGCCATGGCGGAGGTaGCGGCGGCGGGAGAATCACCTCGGTTGCCCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: APRGAAETPWRR*RRRENHLGCPN Trigger: ATTCGGGCAACCGAGGTGATTCTCCCGCCGCCGCCACCTCCGCCATGGCGTCTCTGCCGCCCCACGCGGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057623.14 |
||
| CDS GCA 72 bp | AGCCTGAGGTGTCCTCAGTCTCCAGCCGCCGGCGCTTaGCCCGGCCCTGGCCCACAGACATGCCAACCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SLRCPQSPAAGA*PGPGPQTCQPR Trigger: GCGGGGTTGGCATGTCTGTGGGCCAGGGCCGGGGCAAGCGCCGGCGGCTGGAGACTGAGGACACCTCAGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | TCCTCAGTCTCCAGCCGCCGGCGCTTGCCCCGGCCCTaGCCCACAGACATGCCAACCCCGCTGCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSVSSRRRLPRP*PTDMPTPLLLL Trigger: CAGCAGCAGCAGCGGGGTTGGCATGTCTGTGGGCCAGGGCCGGGGCAAGCGCCGGCGGCTGGAGACTGAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS TCA 72 bp | TTGCAGCCTTCACGGCCACCTCCTCACCGTCGGCACTaGCCAGGGCAGTGCGGAAGCTCTCCCCAGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LQPSRPPPHRRH*PGQCGSSPQGP Trigger: GGGGCCCTGGGGAGAGCTTCCGCACTGCCCTGGTCAGTGCCGACGGTGAGGAGGTGGCCGTGAAGGCTGCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | CCGTGGCCACAGTCTGCTGAGCCAGGCGGGAGCCGCTaGTCACTCTGGAAGCCCTGCTGGGTGAGCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PWPQSAEPGGSR*SLWKPCWVSLR Trigger: CCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTCAGCAGACTGTGGCCACGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | GAGCCAGGCGGGAGCCGCTGCTCACTCTGGAAGCCCTaGTGGGTGAGCCTGAGGTGTCCTCAGTCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPGGSRCSLWKP*WVSLRCPQSPA Trigger: GGCTGGAGACTGAGGACACCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | CAGAGCTCCCTCCACGGTCTCCATCAAAGGGCGGGCTaGCTCCGGGCAGTCCCTCCCGCATCCCTCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QSSLHGLHQRAG*LRAVPPASLSS Trigger: ACTGGAGAGGGATGCGGGAGGGACTGCCCGGAGGCAGCCCGCCCTTTGATGGAGACCGTGGAGGGAGCTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105332.3 |
||
| CDS GCA 72 bp | CACGCGCATGCGGGCCTCCTTGAGCTCCTCGCGGGCTaGATGGGCTGCCTTGTCATTCTGGTCCGAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HAHAGLLELLAG*MGCLVILVREQ Trigger: CTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCGCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | CAGTCTGCTGAGCCAGGCGGGAGCCGCTGCTCACTCTaGAAGCCCTGCTGGGTGAGCCTGAGGTGTCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSAEPGGSRCSL*KPCWVSLRCPQ Trigger: CTGAGGACACCTCAGGCTCACCCAGCAGGGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTCAGCAGACTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CAA 90 bp | CGCATGCGGGCCTCCTTGAGCTCCTCGCGGGCTGCATGGGCTGCCTaGTCATTCTGGTCCGAGAGCAGCTTGGCGTTGTCCAGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RMRASLSSSRAAWAA*SFWSESSLALSSLA Trigger: GGCCAAGCTGGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | GCGGGCCTCCTTGAGCTCCTCGCGGGCTGCATGGGCTaGCTTGTCATTCTGGTCCGAGAGCAGCTTGGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: AGLLELLAGCMG*LVILVREQLGV Trigger: AACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | CGCCGCTCGTGCCTCCGTCGGGTCTCCCGTACCTCCTaGTCTCTTGTGGGGACCCTGAGGTGGTTGTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RRSCLRRVSRTS*SLVGTLRWLFQ Trigger: TTGGAACAACCACCTCAGGGTCCCCACAAGAGAGCAGGAGGTACGGGAGACCCGACGGAGGCACGAGCGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105332.3 |
||
| CDS CCA 72 bp | CGCATGCGGGCCTCCTTGAGCTCCTCGCGGGCTGCATaGGCTGCCTTGTCATTCTGGTCCGAGAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RMRASLSSSRAA*AALSFWSESSL Trigger: CAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGCCCGCATGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS TCA 72 bp | TCGTCGATGTTCACAACACCCGTGGCCACAGTCTGCTaGGCCAGGCGGGAGCCGCTGCTCACTCTGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSMFTTPVATVC*ARREPLLTLEA Trigger: GGCTTCCAGAGTGAGCAGCGGCTCCCGCCTGGCTCAGCAGACTGTGGCCACGGGTGTTGTGAACATCGACGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CAA 72 bp | CGTCGGGCGTCAGCCAGCTCTGACTCGTACAGGGTCTaGATGCCACTCACCTCGCGAGTGGTCACCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRASASSDSYRV*MPLTSRVVTSS Trigger: GGAGGAGGTGACCACTCGCGAGGTGAGTGGCATCAAGACCCTGTACGAGTCAGAGCTGGCTGACGCCCGACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS CAA 72 bp | GCCTCCTTGAGCTCCTCGCGGGCTGCATGGGCTGCCTaGTCATTCTGGTCCGAGAGCAGCTTGGCGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLSSSRAAWAA*SFWSESSLALS Trigger: GGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATGCAGCCCGCGAGGAGCTCAAGGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS TCA 72 bp | CGTCTCATCCAGTACCCGTCGGGCGTCAGCCAGCTCTaGCTCGTACAGGGTCTTGATGCCACTCACCTCGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLIQYPSGVSQL*LVQGLDATHLA Trigger: CGCGAGGTGAGTGGCATCAAGACCCTGTACGAGTCAGAGCTGGCTGACGCCCGACGGGTACTGGATGAGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | GGCCACAGCATGACCATCTTCTGCCTTGGCCAGCTGTaGTCGAAGCTCTGCCACCTCTGTCTCCAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GHSMTIFCLGQL*SKLCHLCLQAL Trigger: CAGGGCCTGGAGACAGAGGTGGCAGAGCTTCGAGCACAGCTGGCCAAGGCAGAAGATGGTCATGCTGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | TCCCGTACCTCCTGCTCTCTTGTGGGGACCCTGAGGTaGTTGTTCCAAGTCCTGGGATACCCCACAGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SRTSCSLVGTLR*LFQVLGYPTAP Trigger: GGGGGCTGTGGGGTATCCCAGGACTTGGAACAACCACCTCAGGGTCCCCACAAGAGAGCAGGAGGTACGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105332.3 |
||
| CDS CAA 72 bp | GTAGGTCTGCTCCAGTTCTACCCGGTACAGGCGCACTaGCTCATCGTGCTGACTGCGCAGGTCCTCCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGLLQFYPVQAH*LIVLTAQVLQG Trigger: GCCCTGGAGGACCTGCGCAGTCAGCACGATGAGCAAGTGCGCCTGTACCGGGTAGAACTGGAGCAGACCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | CGGCAGCCCCTTGAGGTAGTCCTTGGGTCCCCCTGCTaGTGGAAGAGGTCCTCTTCACCGAATTCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RQPLEVVLGSPC*WKRSSSPNSAS Trigger: AGAGGCAGAATTCGGTGAAGAGGACCTCTTCCACCAGCAGGGGGACCCAAGGACTACCTCAAGGGGCTGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CAA 72 bp | CTCCAGGGCCTGAGCCATCTTGAAGTCATATTCCTGTaGCCGGCTGCTGTCCACCTCCACCAAGCGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LQGLSHLEVIFL*PAAVHLHQAPL Trigger: GAGCGGCGCTTGGTGGAGGTGGACAGCAGCCGGCAACAGGAATATGACTTCAAGATGGCTCAGGCCCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS TCA 72 bp | GTGATTCCAGATCCTTCACTCGGCCCTGGGCCACTGTaGGCTCACCTTCCCGCTTCTTGGCACTCTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VIPDPSLGPGPL*AHLPASWHSSW Trigger: CCAGGAAGAGTGCCAAGAAGCGGGAAGGTGAGCTCACAGTGGCCCAGGGCCGAGTGAAGGATCTGGAATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS TCA 72 bp | GCTGACTGCGCAGGTCCTCCAGGGCCTGAGCCATCTTaGAGTCATATTCCTGTTGCCGGCTGCTGTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: ADCAGPPGPEPS*SHIPVAGCCPP Trigger: AGGTGGACAGCAGCCGGCAACAGGAATATGACTTCAAGATGGCTCAGGCCCTGGAGGACCTGCGCAGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | CATGGGCTGCCTTGTCATTCTGGTCCGAGAGCAGCTTaGCGTTGTCCAGCTTGGCCTGGTAGGTCTGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HGLPCHSGPRAA*RCPAWPGRSAP Trigger: TGGAGCAGACCTACCAGGCCAAGCTGGACAACGCCAAGCTGCTCTCGGACCAGAATGACAAGGCAGCCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CAA 72 bp | ACCTCCGTCATCTCCTGTTCCTTAGCGTCCAGCATCTaGCGGAACTTGTCACGCTCCCCAGCCAAGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSVISCSLASSI*RNLSRSPAKAS Trigger: GGAGGCCTTGGCTGGGGAGCGTGACAAGTTCCGCAAGATGCTGGACGCTAAGGAACAGGAGATGACGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | TTAATGTCCAGCAGCTCTTGGTACTCTGCCAGCTGCTaGTGCATGGCGTCCCGCACCTCCGTCATCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LMSSSSWYSASC*CMASRTSVISC Trigger: ACAGGAGATGACGGAGGTGCGGGACGCCATGCAGCAGCAGCTGGCAGAGTACCAAGAGCTGCTGGACATTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS CCA 72 bp | CATTCTGGTCCGAGAGCAGCTTGGCGTTGTCCAGCTTaGCCTGGTAGGTCTGCTCCAGTTCTACCCGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: HSGPRAAWRCPA*PGRSAPVLPGT Trigger: TGTACCGGGTAGAACTGGAGCAGACCTACCAGGCCAAGCTGGACAACGCCAAGCTGCTCTCGGACCAGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
||
| CDS GCA 72 bp | TCCTCTAGCTCAGCCTGCACCTTTCCAATTTCAATCTaGAGCCGGGCACGTTCACGGGCCGTCTCATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSACTFPISI*SRARSRAVSSS Trigger: ACTGGATGAGACGGCCCGTGAACGTGCCCGGCTGCAGATTGAAATTGGAAAGGTGCAGGCTGAGCTAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057623.14 ENSMUST00000179022.8 |
||
| CDS CAA 90 bp | TCCAGAACCTGTCTCTTGATCCTCCAGTTCCCCAAAGACTGGTCCTaGTCTGAAGAGTTCTTAAGGCGCACGAACCTGCCCTCTGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRTCLLILQFPKDWS*SEEFLRRTNLPSGS Trigger: GGACCCAGAGGGCAGGTTCGTGCGCCTTAAGAACTCTTCAGACAAGGACCAGTCTTTGGGGAACTGGAGGATCAAGAGACAGGTTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS CAA 72 bp | TGTCTCTTGATCCTCCAGTTCCCCAAAGACTGGTCCTaGTCTGAAGAGTTCTTAAGGCGCACGAACCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: CLLILQFPKDWS*SEEFLRRTNLP Trigger: GGGCAGGTTCGTGCGCCTTAAGAACTCTTCAGACAAGGACCAGTCTTTGGGGAACTGGAGGATCAAGAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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| CDS CCA 72 bp | AGAACCTGTCTCTTGATCCTCCAGTTCCCCAAAGACTaGTCCTTGTCTGAAGAGTTCTTAAGGCGCACGAAC | + |
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Preference number: 6 (lower is better) Translates to: RTCLLILQFPKD*SLSEEFLRRTN Trigger: GTTCGTGCGCCTTAAGAACTCTTCAGACAAGGACCAGTCTTTGGGGAACTGGAGGATCAAGAGACAGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057623.14 ENSMUST00000105332.3 ENSMUST00000179022.8 |
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