Pregenerated sensors for LMNB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024590Ensembl transcript IDs: ENSMUST00000025486.9
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCCTGCCCGCTCCCCTCATGAGTCAACAATGTAAGAGAAGTAGTTaGCCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACA | + |
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Preference number: 1 (lower is better) Translates to: RLPAPLMSQQCKRSS*PINSSVEPPSRVRT Trigger: TGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAACTACTTCTCTTACATTGTTGACTCATGAGGGGAGCGGGCAGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAAATATCATGTGCTTCTaGGAAGGCTCTGCACTGTAT | + |
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Preference number: 2 (lower is better) Translates to: PLPPAQHHFIESREGPRANIMCF*EGSALY Trigger: ATACAGTGCAGAGCCTTCTCAGAAGCACATGATATT...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| 3UTR-3UTR GCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTCTTCTGAGAAGGCTCTaGACTGTATACAGGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTLLRRL*TVYRTP Trigger: TGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAG...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| 3UTR TCA 72 bp | GCTCCCCTCATGAGTCAACAATGTAAGAGAAGTAGTTaGCCAATCAACAGCTCTGTAGAACCTCCATCCAGA | + |
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Preference number: 3 (lower is better) Translates to: APLMSQQCKRSS*PINSSVEPPSR Trigger: TCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAACTACTTCTCTTACATTGTTGACTCATGAGGGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCATTGCCCAGCTCGATCTaGAGCTTGGCGCGCTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRALPSSI*SLARSR Trigger: CCGCGAGCGCGCCAAGCTCCAGATCGAGCTGGGCAA...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGGTCGTGCTCGGCCTTaGACTTGCCCAGCTCGATCT | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRAGRARP*TCPARS Trigger: AGATCGAGCTGGGCAAGTTCAAGGCCGAGCACGACC...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | CCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGATCGGTCACCTGCAGCTaGAGCGCGCTGTTCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: PPSRTAPFYREQRRTESRSVTCS*SALFSV Trigger: GACGGAGAACAGCGCGCTGCAGCTGCAGGTGACCGA...TCTGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAAGCAGCAGCTGGTCGTaGTCGGCCTTGAACTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRASSSWS*SALNLP Trigger: GGGCAAGTTCAAGGCCGAGCACGACCAGCTGCTGCT...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGCTGCATCTGGTCCCTaGTCTCCGCCATCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRAAASGP*SPPSLS Trigger: AGAGAGAGATGGCGGAGATCAGGGACCAGATGCAGC...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCATCTCCGTCTCCAGGCTaGGCACCTTATCGATGTACA | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRASPSPG*APYRCT Trigger: TGTACATCGATAAGGTGCGCAGCCTGGAGACGGAGA...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCGTCCAGAGCGCGGCGTaGGTCGGCCAGCTCGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFVQSAA*VGQLGL Trigger: GAGACCGAGCTGGCCGACGCACGCCGCGCTCTGGAC...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCACTCCCAGCCTCCCATTaGTTGATCCTGCTCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRALPASH*LILLRS Trigger: ACTTCTGAGCAGGATCAACCAATGGGAGGCTGGGAG...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGGAAGTGTTCATCTCTaGGGAGAGTCTGGCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRAGSVHL*GESGIL Trigger: GAGAATGCCAGACTCTCCTCAGAGATGAACACTTCC...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTTTGGAGGGCTGGCTGTaGCGCCAGCATTTGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTLEGWL*RQHLQP Trigger: GGGCTGCAAATGCTGGCGTCACAGCCAGCCCTCCAA...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTGCTCTTGGGGCTCCCTaGTGGTGGAAACGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTALGAP*WWKRSS Trigger: GGAGGAGCGTTTCCACCAGCAGGGAGCCCCAAGAGC...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCATCTCTGAGGAGAGTCTaGCATTCTCAAGCTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRASLRRV*HSQAWR Trigger: ACGCCAAGCTTGAGAATGCCAGACTCTCCTCAGAGA...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCACACACTGTGACAGTCTaGCCAGCCTTCAGCACATAT | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRAHTVTV*PAFSTY Trigger: ATATGTGCTGAAGGCTGGCCAGACTGTCACAGTGTG...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCATTTATTGGATGCTCTTaGGGCTCCCTGCTGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRAFIGCS*GSLLVE Trigger: TTCCACCAGCAGGGAGCCCCAAGAGCATCCAATAAA...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | CCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGATCCTCAGTAAGGCTCTaGCAGCGATTCTCCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: PPSRTAPFYREQRRTESRSSVRL*QRFSKS Trigger: GGATTTGGAGAATCGCTGTCAGAGCCTTACTGAGGA...TCTGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCATGTCTCCAATTTTTCTaGTCATCTCCCAGCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRACLQFF*SSPSLP Trigger: TGGGAGGCTGGGAGATGATCAGAAAAATTGGAGACA...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTCGCGCTCGGTCACCTaGAGCTGCAGCGCGCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFSRSVT*SCSALF Trigger: GAACAGCGCGCTGCAGCTGCAGGTGACCGAGCGCGA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGCTCTAGACTCTTTCTaGAGGTTAGAGAGCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRAALDSF*RLESCE Trigger: CTCACAGCTCTCTAACCTGCAGAAAGAGTCTAGAGC...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGATGGCACAGCTTTTATTaGATGCTCTTGGGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PPSRTAPFYREQRRTESRWHSFY*MLLGLP Trigger: AGGGAGCCCCAAGAGCATCCAATAAAAGCTGTGCCA...TCTGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAATGTCCTCCAATTCCTaGATCCTTTCCAAACACGCT | + |
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Preference number: 4 (lower is better) Translates to: PLPPAQHHFIESREGPRAMSSNS*ILSKHA Trigger: AGCGTGTTTGGAAAGGATCCAGGAATTGGAGGACAT...TGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTTCTTCCGCTTTCCTCTaGTGGTGCGCACACTGCGAC | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTSSAFL*WCAHCD Trigger: GTCGCAGTGTGCGCACCACCAGAGGAAAGCGGAAGA...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGAGTACCCCAAGAGTTCTaGTTCTTCCAGATGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PPSRTAPFYREQRRTESRVPQEF*FFQMRS Trigger: TGACCTCATCTGGAAGAACCAGAACTCTTGGGGTAC...TCTGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCCACGTTCCCCGTGGCTaGGGCAGAGTGGGAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFHVPRG*GRVGNA Trigger: AGCATTTCCCACTCTGCCTCAGCCACGGGGAACGTG...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTTCTGGTTCTTCCAGATaGGGTCAGTTGGAGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTSGSSR*GQLEGW Trigger: CCAGCCCTCCAACTGACCTCATCTGGAAGAACCAGA...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCGCTTTCCTCTGGTGGTaGGCACACTGCGACTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFAFLWW*AHCDWR Trigger: CCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGC...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTCCGCTTTCCTCTGGTaGTGCGCACACTGCGACTGG | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFSAFLW*CAHCDW Trigger: CCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCCCAGATGAGGTCAGTTaGAGGGCTGGCTGTGACGCC | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFPDEVS*RAGCDA Trigger: GGCGTCACAGCCAGCCCTCCAACTGACCTCATCTGG...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTTGCAGCCCACACTGTaGCAGTCTGGCCAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFLQPTL*QSGQPS Trigger: TGAAGGCTGGCCAGACTGTCACAGTGTGGGCTGCAA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCAGCTGCTGCTGCATCTaGTCCCTGATCTCCGCCATC | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFSCCCI*SLISAI Trigger: GATGGCGGAGATCAGGGACCAGATGCAGCAGCAGCT...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTATCTCATGCAGGGCTTaGGCCAGCTTGTACTCATAC | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTISCRA*ASLYSY Trigger: GTATGAGTACAAGCTGGCTCAAGCCCTGCATGAGAT...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCCCTTCTTGGCATAATTaGGCAGCAGCTGGTCGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFPSWHN*AAAGRA Trigger: AGCACGACCAGCTGCTGCTCAATTATGCCAAGAAGG...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTTCTAGCTGGGCAATCTaGTCTTTCAGATCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTSSWAI*SFRSSK Trigger: CTTGGAGGATCTGAAAGATCAGATTGCCCAGCTAGA...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCCGGGTATGGTGGTCTTaGAGACTGTGCTTCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFRVWWS*RLCFSE Trigger: CTCAGAGAAGCACAGTCTTCAAGACCACCATACCCG...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTACTCATACTCAATCTaGCGCCCAGAGTCCACTTCC | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFYSYSI*RPESTS Trigger: GGAAGTGGACTCTGGGCGTCAGATTGAGTATGAGTA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR GCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTGTTTCATCTGCTAACTaGTTTTTGGCGGCAGATAAG | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTVSSAN*FLAADK Trigger: CTTATCTGCCGCCAAAAAGCAGTTAGCAGATGAAAC...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTCTCGAAGCTTGATCTaGGCTCCACTGAGATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFSRSLI*APLRSD Trigger: ATCTGATCTCAGTGGAGCCCAGATCAAGCTTCGAGA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTCTTCAGCACATATCTTaGGGTATATTTGTAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTLQHIS*GIFVTD Trigger: GTCAGTTACAAATATACCTCAAGATATGTGCTGAAG...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR TCA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTCCTCCTTGTCTCATTaGTCTCCTCTTCATACATAT | + |
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Preference number: 4 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFSSLSH*SPLHTY Trigger: ATATGTATGAAGAGGAGATCAATGAGACAAGGAGGA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 90 bp | AGGCCGGTGAGCTCGCGGCCGCGCACCTCCTCGCGCTCGGTCACCTaGAGCTGCAGCGCGCTGTTCTCCGTCTCCAGGCTGCGCACCTTA | + |
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Preference number: 5 (lower is better) Translates to: RPVSSRPRTSSRSVT*SCSALFSVSRLRTL Trigger: TAAGGTGCGCAGCCTGGAGACGGAGAACAGCGCGCTGCAGCTGCAGGTGACCGAGCGCGAGGAGGTGCGCGGCCGCGAGCTCACCGGCCT 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 90 bp | GTGAGCTCGCGGCCGCGCACCTCCTCGCGCTCGGTCACCTGCAGCTaGAGCGCGCTGTTCTCCGTCTCCAGGCTGCGCACCTTATCGATG | + |
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Preference number: 5 (lower is better) Translates to: VSSRPRTSSRSVTCS*SALFSVSRLRTLSM Trigger: CATCGATAAGGTGCGCAGCCTGGAGACGGAGAACAGCGCGCTGCAGCTGCAGGTGACCGAGCGCGAGGAGGTGCGCGGCCGCGAGCTCAC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 90 bp | AGCAGCAGCTGGTCGTGCTCGGCCTTGAACTTGCCCAGCTCGATCTaGAGCTTGGCGCGCTCGCGGGCCGTGTCGTCCAGAGCGCGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SSSWSCSALNLPSSI*SLARSRAVSSRARR Trigger: ACGCCGCGCTCTGGACGACACGGCCCGCGAGCGCGCCAAGCTCCAGATCGAGCTGGGCAAGTTCAAGGCCGAGCACGACCAGCTGCTGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 90 bp | GGGCTCCCTGCTGGTGGAAACGCTCCTCCTCCACAGCCACTCCGATaGGCTCCTCCTCCTCCTCCTCCTCCTCCTCGGGTATGGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: GLPAGGNAPPPQPLR*APPPPPPPPRVWWS Trigger: AGACCACCATACCCGAGGAGGAGGAGGAGGAGGAGGAGGAGCCCATCGGAGTGGCTGTGGAGGAGGAGCGTTTCCACCAGCAGGGAGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 90 bp | CCTCCACATCAACTCTCTTCCGCTTTCCTCTGGTGGTGCGCACACTaGGACTGGAGGACGCTCTGGACACGGTCACCCGGGAAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPHQLSSAFLWWCAH*DWRTLWTRSPGKKG Trigger: GCCCTTCTTCCCGGGTGACCGTGTCCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGAAGAGAGTTGATGTGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 90 bp | TCGCCTCCGACTCCTCCACATCAACTCTCTTCCGCTTTCCTCTGGTaGTGCGCACACTGCGACTGGAGGACGCTCTGGACACGGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPTPPHQLSSAFLW*CAHCDWRTLWTRSP Trigger: GGGTGACCGTGTCCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGAAGAGAGTTGATGTGGAGGAGTCGGAGGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 90 bp | TCCGCTTTCCTCTGGTGGTGCGCACACTGCGACTGGAGGACGCTCTaGACACGGTCACCCGGGAAGAAGGGCTTGGAGAGAGCTTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SAFLWWCAHCDWRTL*TRSPGKKGLERALT Trigger: GGTTAAAGCTCTCTCCAAGCCCTTCTTCCCGGGTGACCGTGTCCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 90 bp | TGCTCGCCTCCGACTCCTCCACATCAACTCTCTTCCGCTTTCCTCTaGTGGTGCGCACACTGCGACTGGAGGACGCTCTGGACACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSPPTPPHQLSSAFL*WCAHCDWRTLWTRS Trigger: TGACCGTGTCCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGAAGAGAGTTGATGTGGAGGAGTCGGAGGCGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGATGCTCGGCCTTGAACTaGCCCAGCTCGATCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSRTAPFYREQRRTESRCSALN*PSSIWS Trigger: GCTCCAGATCGAGCTGGGCAAGTTCAAGGCCGAGCA...TCTGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 90 bp | TTCACCAGTACCCCAAGAGTTCTGGTTCTTCCAGATGAGGTCAGTTaGAGGGCTGGCTGTGACGCCAGCATTTGCAGCCCACACTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FTSTPRVLVLPDEVS*RAGCDASICSPHCD Trigger: GTCACAGTGTGGGCTGCAAATGCTGGCGTCACAGCCAGCCCTCCAACTGACCTCATCTGGAAGAACCAGAACTCTTGGGGTACTGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS TCA 90 bp | CATCAGCTCTTCCCGGGCACTGTTGACAGTGGAAGTGTTCATCTCTaGGGAGAGTCTGGCATTCTCAAGCTTGGCGTGGTAGGTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQLFPGTVDSGSVHL*GESGILKLGVVGLL Trigger: GAGCAGACCTACCACGCCAAGCTTGAGAATGCCAGACTCTCCTCAGAGATGAACACTTCCACTGTCAACAGTGCCCGGGAAGAGCTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS TCA 90 bp | TCTCGATCCTCATCCGGCTCTCCATCAGCTCTTCCCGGGCACTGTTaGCAGTGGAAGTGTTCATCTCTGAGGAGAGTCTGGCATTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRSSSGSPSALPGHC*QWKCSSLRRVWHSQ Trigger: TTGAGAATGCCAGACTCTCCTCAGAGATGAACACTTCCACTGTCAACAGTGCCCGGGAAGAGCTGATGGAGAGCCGGATGAGGATCGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 90 bp | TCCTCCAATTCCTGGATCCTTTCCAAACACGCTCTAGACTCTTTCTaGAGGTTAGAGAGCTGTGAGGAGAGGCTCTCGATCCTCATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSNSWILSKHALDSF*RLESCEERLSILIR Trigger: CCGGATGAGGATCGAGAGCCTCTCCTCACAGCTCTCTAACCTGCAGAAAGAGTCTAGAGCGTGTTTGGAAAGGATCCAGGAATTGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTCCCGGGAAGAAGGGCTaGGAGAGAGCTTTAACCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTPGKKG*ERALTA Trigger: AGCGGTTAAAGCTCTCTCCAAGCCCTTCTTCCCGGG...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 90 bp | CGGCGCGAGTTGTCTCTCTCCTTAGCAAGCATGTCCTCCAATTCCTaGATCCTTTCCAAACACGCTCTAGACTCTTTCTGCAGGTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRELSLSLASMSSNS*ILSKHALDSFCRLE Trigger: CTCTAACCTGCAGAAAGAGTCTAGAGCGTGTTTGGAAAGGATCCAGGAATTGGAGGACATGCTTGCTAAGGAGAGAGACAACTCGCGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTGGTCGTGCTCGGCCTaGAACTTGCCCAGCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFWSCSA*NLPSSI Trigger: GATCGAGCTGGGCAAGTTCAAGGCCGAGCACGACCA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTCCCTCTAAACTCTTTTaGTCCCCTAGGGCAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTPSKLF*SPRAVA Trigger: GGCTACTGCCCTAGGGGACAAAAAGAGTTTAGAGGG...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTCCAGCCTCCCATTGGTaGATCCTGCTCAGAAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTPASHW*ILLRSV Trigger: AACACTTCTGAGCAGGATCAACCAATGGGAGGCTGG...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCCGCACAGCACCATTTTATAGAGAGCAGAGAAGGACCGAGAGCAGATTCCTCCTTGTCTCATaGATCTCCTCTTCATACATA | + |
|
Preference number: 5 (lower is better) Translates to: PPSRTAPFYREQRRTESRFLLVS*ISSSYI Trigger: TATGTATGAAGAGGAGATCAATGAGACAAGGAGGAA...TCTGCTCTCGGTCCTTCTCTGCTCTCTATAAAATGGTGCTGTGCGGGAGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTCATCTCATGCAGGGCTaGAGCCAGCTTGTACTCATA | + |
|
Preference number: 5 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTHLMQG*SQLVLI Trigger: TATGAGTACAAGCTGGCTCAAGCCCTGCATGAGATG...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | TTGACCAATCAACAGCTCTGTAGAACCTCCATCCAGAGTGCGTACATGGTGACTTCTGCTAACTGCTTTTaGGCGGCAGATAAGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTNQQLCRTSIQSAYMVTSANCF*AADKDA Trigger: AGCATCCTTATCTGCCGCCAAAAAGCAGTTAGCAGA...AGTCACCATGTACGCACTCTGGATGGAGGTTCTACAGAGCTGTTGATTGGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCTCTTCCCGGGCACTGTaGACAGTGGAAGTGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFSSRAL*TVEVFI Trigger: GATGAACACTTCCACTGTCAACAGTGCCCGGGAAGA...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS-3UTR CAA 90 bp | AAATATCATGTGCTTCTGAGAAGGCTCTGCACTGTATACAGGACTCCATGCTTCATGGCACAGCTTTTATaGGATGCTCTTGGGGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KYHVLLRRLCTVYRTPCFMAQLL*DALGAP Trigger: GGGAGCCCCAAGAGCATCCAATAAAAGCTGTGCCAT...GAAGCATGGAGTCCTGTATACAGTGCAGAGCCTTCTCAGAAGCACATGATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS TCA 90 bp | AACTGCTTTTTGGCGGCAGATAAGGATGCTTCTAGCTGGGCAATCTaGTCTTTCAGATCCTCCAAGTCTCCCTCTAAACTCTTTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NCFLAADKDASSWAI*SFRSSKSPSKLFLS Trigger: GGACAAAAAGAGTTTAGAGGGAGACTTGGAGGATCTGAAAGATCAGATTGCCCAGCTAGAAGCATCCTTATCTGCCGCCAAAAAGCAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 72 bp | AGCTCGCGGCCGCGCACCTCCTCGCGCTCGGTCACCTaGAGCTGCAGCGCGCTGTTCTCCGTCTCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRPRTSSRSVT*SCSALFSVSRL Trigger: CAGCCTGGAGACGGAGAACAGCGCGCTGCAGCTGCAGGTGACCGAGCGCGAGGAGGTGCGCGGCCGCGAGCT 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 90 bp | AGCTGGTCGTGCTCGGCCTTGAACTTGCCCAGCTCGATCTGGAGCTaGGCGCGCTCGCGGGCCGTGTCGTCCAGAGCGCGGCGTGCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SWSCSALNLPSSIWS*ARSRAVSSRARRAS Trigger: CGACGCACGCCGCGCTCTGGACGACACGGCCCGCGAGCGCGCCAAGCTCCAGATCGAGCTGGGCAAGTTCAAGGCCGAGCACGACCAGCT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 72 bp | TGCTCGGCCTTGAACTTGCCCAGCTCGATCTGGAGCTaGGCGCGCTCGCGGGCCGTGTCGTCCAGAGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CSALNLPSSIWS*ARSRAVSSRAR Trigger: CCGCGCTCTGGACGACACGGCCCGCGAGCGCGCCAAGCTCCAGATCGAGCTGGGCAAGTTCAAGGCCGAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 72 bp | TGGTCGTGCTCGGCCTTGAACTTGCCCAGCTCGATCTaGAGCTTGGCGCGCTCGCGGGCCGTGTCGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSCSALNLPSSI*SLARSRAVSSR Trigger: TCTGGACGACACGGCCCGCGAGCGCGCCAAGCTCCAGATCGAGCTGGGCAAGTTCAAGGCCGAGCACGACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 72 bp | GCTGGTGGAAACGCTCCTCCTCCACAGCCACTCCGATaGGCTCCTCCTCCTCCTCCTCCTCCTCCTCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AGGNAPPPQPLR*APPPPPPPPRV Trigger: TACCCGAGGAGGAGGAGGAGGAGGAGGAGGAGCCCATCGGAGTGGCTGTGGAGGAGGAGCGTTTCCACCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 72 bp | CAACTCTCTTCCGCTTTCCTCTGGTGGTGCGCACACTaGGACTGGAGGACGCTCTGGACACGGTCACCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QLSSAFLWWCAH*DWRTLWTRSPG Trigger: CCCGGGTGACCGTGTCCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGAAGAGAGTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 72 bp | CTCTGGTGGTGCGCACACTGCGACTGGAGGACGCTCTaGACACGGTCACCCGGGAAGAAGGGCTTGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LWWCAHCDWRTL*TRSPGKKGLER Trigger: TCTCTCCAAGCCCTTCTTCCCGGGTGACCGTGTCCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 72 bp | TCTTCCGCTTTCCTCTGGTGGTGCGCACACTGCGACTaGAGGACGCTCTGGACACGGTCACCCGGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSAFLWWCAHCD*RTLWTRSPGKK Trigger: CTTCTTCCCGGGTGACCGTGTCCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 72 bp | CCGACTCCTCCACATCAACTCTCTTCCGCTTTCCTCTaGTGGTGCGCACACTGCGACTGGAGGACGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PTPPHQLSSAFL*WCAHCDWRTLW Trigger: CCAGAGCGTCCTCCAGTCGCAGTGTGCGCACCACCAGAGGAAAGCGGAAGAGAGTTGATGTGGAGGAGTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 90 bp | CAGCCTCACCTGCGCGTCGTGCTGCTCCCGCATCTCATGCAGGGCTaGAGCCAGCTTGTACTCATACTCAATCTGACGCCCAGAGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QPHLRVVLLPHLMQG*SQLVLILNLTPRVH Trigger: GTGGACTCTGGGCGTCAGATTGAGTATGAGTACAAGCTGGCTCAAGCCCTGCATGAGATGCGGGAGCAGCACGACGCGCAGGTGAGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 90 bp | TGCGACTGGAGGACGCTCTGGACACGGTCACCCGGGAAGAAGGGCTaGGAGAGAGCTTTAACCGCTCTTCTTCGCCTTCCAGGAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CDWRTLWTRSPGKKG*ERALTALLRLPGAS Trigger: GGAAGCTCCTGGAAGGCGAAGAAGAGCGGTTAAAGCTCTCTCCAAGCCCTTCTTCCCGGGTGACCGTGTCCAGAGCGTCCTCCAGTCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 72 bp | CTGCGCGTCGTGCTGCTCCCGCATCTCATGCAGGGCTaGAGCCAGCTTGTACTCATACTCAATCTGACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LRVVLLPHLMQG*SQLVLILNLTP Trigger: GGGCGTCAGATTGAGTATGAGTACAAGCTGGCTCAAGCCCTGCATGAGATGCGGGAGCAGCACGACGCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 72 bp | ATGGCACAGCTTTTATTGGATGCTCTTGGGGCTCCCTaGTGGTGGAAACGCTCCTCCTCCACAGCCACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: MAQLLLDALGAP*WWKRSSSTATP Trigger: CGGAGTGGCTGTGGAGGAGGAGCGTTTCCACCAGCAGGGAGCCCCAAGAGCATCCAATAAAAGCTGTGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 72 bp | ACCCCAAGAGTTCTGGTTCTTCCAGATGAGGTCAGTTaGAGGGCTGGCTGTGACGCCAGCATTTGCAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TPRVLVLPDEVS*RAGCDASICSP Trigger: TGGGCTGCAAATGCTGGCGTCACAGCCAGCCCTCCAACTGACCTCATCTGGAAGAACCAGAACTCTTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS TCA 72 bp | TCATCCGGCTCTCCATCAGCTCTTCCCGGGCACTGTTaGCAGTGGAAGTGTTCATCTCTGAGGAGAGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGSPSALPGHC*QWKCSSLRRVW Trigger: CCAGACTCTCCTCAGAGATGAACACTTCCACTGTCAACAGTGCCCGGGAAGAGCTGATGGAGAGCCGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 72 bp | CTCATCCGGCTCTCCATCAGCTCTTCCCGGGCACTGTaGACAGTGGAAGTGTTCATCTCTGAGGAGAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LIRLSISSSRAL*TVEVFISEESL Trigger: CAGACTCTCCTCAGAGATGAACACTTCCACTGTCAACAGTGCCCGGGAAGAGCTGATGGAGAGCCGGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 90 bp | CTCTCGATCCTCATCCGGCTCTCCATCAGCTCTTCCCGGGCACTGTaGACAGTGGAAGTGTTCATCTCTGAGGAGAGTCTGGCATTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSILIRLSISSSRAL*TVEVFISEESLAFS Trigger: TGAGAATGCCAGACTCTCCTCAGAGATGAACACTTCCACTGTCAACAGTGCCCGGGAAGAGCTGATGGAGAGCCGGATGAGGATCGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS TCA 72 bp | ACACGCTCTAGACTCTTTCTGCAGGTTAGAGAGCTGTaGGGAGAGGCTCTCGATCCTCATCCGGCTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: TRSRLFLQVREL*GEALDPHPALH Trigger: ATGGAGAGCCGGATGAGGATCGAGAGCCTCTCCTCACAGCTCTCTAACCTGCAGAAAGAGTCTAGAGCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS TCA 72 bp | TTCCCGGGCACTGTTGACAGTGGAAGTGTTCATCTCTaGGGAGAGTCTGGCATTCTCAAGCTTGGCGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FPGTVDSGSVHL*GESGILKLGVV Trigger: TACCACGCCAAGCTTGAGAATGCCAGACTCTCCTCAGAGATGAACACTTCCACTGTCAACAGTGCCCGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 72 bp | TCTTTCAGATCCTCCAAGTCTCCCTCTAAACTCTTTTaGTCCCCTAGGGCAGTAGCCAGCGCCGCATCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SFRSSKSPSKLF*SPRAVASAASL Trigger: TAAGGATGCGGCGCTGGCTACTGCCCTAGGGGACAAAAAGAGTTTAGAGGGAGACTTGGAGGATCTGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS TCA 72 bp | TTGGCGGCAGATAAGGATGCTTCTAGCTGGGCAATCTaGTCTTTCAGATCCTCCAAGTCTCCCTCTAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LAADKDASSWAI*SFRSSKSPSKL Trigger: GAGTTTAGAGGGAGACTTGGAGGATCTGAAAGATCAGATTGCCCAGCTAGAAGCATCCTTATCTGCCGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CAA 72 bp | TCCTTAGAGTTTAGTGCCGCCTCATACTCTCGAAGCTaGATCTGGGCTCCACTGAGATCAGATTCCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLEFSAASYSRS*IWAPLRSDSFL Trigger: CAAGAAGGAATCTGATCTCAGTGGAGCCCAGATCAAGCTTCGAGAGTATGAGGCGGCACTAAACTCTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS CCA 72 bp | TTGTCTCTCTCCTTAGCAAGCATGTCCTCCAATTCCTaGATCCTTTCCAAACACGCTCTAGACTCTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLSLASMSSNS*ILSKHALDSFC Trigger: GCAGAAAGAGTCTAGAGCGTGTTTGGAAAGGATCCAGGAATTGGAGGACATGCTTGCTAAGGAGAGAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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| CDS GCA 72 bp | TCCAAATCCACTTTAAGTAAAGTTTCATCTGCTAACTaGTTTTTGGCGGCAGATAAGGATGCTTCTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SKSTLSKVSSAN*FLAADKDASSW Trigger: CCAGCTAGAAGCATCCTTATCTGCCGCCAAAAAGCAGTTAGCAGATGAAACTTTACTTAAAGTGGATTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025486.9 |
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