Pregenerated sensors for LMLN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022802Ensembl transcript IDs: ENSMUST00000023497.3
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAGTTCCTCTCCACGCTCCAGGTGGCTGTGTGGCTGGTAAGGAGTaGCTGCCGTGGAGCAGTCACACTGGGTGGTCCACTCTTCACAGT | + |
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Preference number: 1 (lower is better) Translates to: VVPLHAPGGCVAGKE*LPWSSHTGWSTLHS Trigger: ACTGTGAAGAGTGGACCACCCAGTGTGACTGCTCCACGGCAGTCACTCCTTACCAGCCACACAGCCACCTGGAGCGTGGAGAGGAACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | TTCCTCTCCACGCTCCAGGTGGCTGTGTGGCTGGTAAGGAGTGACTaGCGTGGAGCAGTCACACTGGGTGGTCCACTCTTCACAGTCCTA | + |
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Preference number: 1 (lower is better) Translates to: FLSTLQVAVWLVRSD*RGAVTLGGPLFTVL Trigger: TAGGACTGTGAAGAGTGGACCACCCAGTGTGACTGCTCCACGGCAGTCACTCCTTACCAGCCACACAGCCACCTGGAGCGTGGAGAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | TTGAACACAGCACGCCAGTCCTCCTGGGCTGGAGGCAAAAGGCCATaGCAGGGAGAACTAGTGCTCACCATGAAGCCAGCCAGCTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LNTARQSSWAGGKRP*QGELVLTMKPASCE Trigger: CTCACAGCTGGCTGGCTTCATGGTGAGCACTAGTTCTCCCTGGCATGGCCTTTTGCCTCCAGCCCAGGAGGACTGGCGTGCTGTGTTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | CCAGCTGTCCCCGCCTCTCTTTCCTGTCCCACCTCACTCCTATCATaGAGCACCCTGCTTGGTTCTTTCCACGGGCCACTGGTTTTACCC | + |
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Preference number: 1 (lower is better) Translates to: PAVPASLSCPTSLLS*STLLGSFHGPLVLP Trigger: GGGTAAAACCAGTGGCCCGTGGAAAGAACCAAGCAGGGTGCTCCATGATAGGAGTGAGGTGGGACAGGAAAGAGAGGCGGGGACAGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | CGTGGAGCAGTCACACTGGGTGGTCCACTCTTCACAGTCCTACTGTaGACAGCACTTCCAAGCCAGAGTGAAGAATGGCACCCCTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: RGAVTLGGPLFTVLL*TALPSQSEEWHPCG Trigger: CCCACAGGGGTGCCATTCTTCACTCTGGCTTGGAAGTGCTGTCCACAGTAGGACTGTGAAGAGTGGACCACCCAGTGTGACTGCTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | GCGGTGCCACAGCTGGTTAGGGTCAGTGCTTATAACACAGTGCTCTaGTCCCTCCCACAACTCCTTCTCCTGCCACTCGCCAGTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: AVPQLVRVSAYNTVL*SLPQLLLLPLASVS Trigger: TGAAACACTGGCGAGTGGCAGGAGAAGGAGTTGTGGGAGGGAGCAGAGCACTGTGTTATAAGCACTGACCCTAACCAGCTGTGGCACCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | CCGCCTCTCTTTCCTGTCCCACCTCACTCCTATCATGGAGCACCCTaGTTGGTTCTTTCCACGGGCCACTGGTTTTACCCTTGTGACGTG | + |
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Preference number: 1 (lower is better) Translates to: PPLFPVPPHSYHGAP*LVLSTGHWFYPCDV Trigger: CACGTCACAAGGGTAAAACCAGTGGCCCGTGGAAAGAACCAAGCAGGGTGCTCCATGATAGGAGTGAGGTGGGACAGGAAAGAGAGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | GAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCTaGAGGCAAAAGGCCATGCCAGGGAGAACTAGTGCTCACCATGAA | + |
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Preference number: 1 (lower is better) Translates to: EGATWIEHSTPVLLG*RQKAMPGRTSAHHE Trigger: TTCATGGTGAGCACTAGTTCTCCCTGGCATGGCCTTTTGCCTCCAGCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | CTCCCTCCCACAACTCCTTCTCCTGCCACTCGCCAGTGTTTCATGTaGCAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LPPTTPSPATRQCFM*QSWLRRECPYVAED Trigger: GTCCTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTGGCGAGTGGCAGGAGAAGGAGTTGTGGGAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | AGGATGTCCACCTCACGCTGGGACAACTCAGCTGTCTTCAGAGACTaGCTCTCCTCTGTTCACCCAGCTTCTAGGTACATAGCTGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: RMSTSRWDNSAVFRD*LSSVHPASRYIAGQ Trigger: CTGGCCAGCTATGTACCTAGAAGCTGGGTGAACAGAGGAGAGCCAGTCTCTGAAGACAGCTGAGTTGTCCCAGCGTGAGGTGGACATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | TGGAGACTCCGGGACGCTGAGCAGGGCCAGCTGCAACTTAGGCCTTaGCAAGTGTTAGTCACAGGGCTTTACAGCGTAAAATTTCAGACC | + |
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Preference number: 1 (lower is better) Translates to: WRLRDAEQGQLQLRP*QVLVTGLYSVKFQT Trigger: GGTCTGAAATTTTACGCTGTAAAGCCCTGTGACTAACACTTGGCAAGGCCTAAGTTGCAGCTGGCCCTGCTCAGCGTCCCGGAGTCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | GGTCAGAGGACAGCTTTCGGGAGTCAGTCCCCTTCTGCTCCCATATaGTCTCCAGTTATCAAAGTCAGGCCTTTGGGCTTGGTGGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: GQRTAFGSQSPSAPI*SPVIKVRPLGLVAS Trigger: ACTTGCCACCAAGCCCAAAGGCCTGACTTTGATAACTGGAGACCATATGGGAGCAGAAGGGGACTGACTCCCGAAAGCTGTCCTCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | CTCTCTTTCCTGTCCCACCTCACTCCTATCATGGAGCACCCTGCTTaGTTCTTTCCACGGGCCACTGGTTTTACCCTTGTGACGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LSFLSHLTPIMEHPA*FFPRATGFTLVTWK Trigger: CTTCCACGTCACAAGGGTAAAACCAGTGGCCCGTGGAAAGAACCAAGCAGGGTGCTCCATGATAGGAGTGAGGTGGGACAGGAAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | AGTTTCGTACTGTGGAGGATGGGATCTTCAACTCAAACTCTGGACTaGGCTGTCAGCAGCTCTCTGAGTGACCTTGATGCTCACGGACGG | + |
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Preference number: 1 (lower is better) Translates to: SFVLWRMGSSTQTLD*AVSSSLSDLDAHGR Trigger: CCGTCCGTGAGCATCAAGGTCACTCAGAGAGCTGCTGACAGCCCAGTCCAGAGTTTGAGTTGAAGATCCCATCCTCCACAGTACGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | CCCCTTCTGCTCCCATATGGTCTCCAGTTATCAAAGTCAGGCCTTTaGGCTTGGTGGCAAGTGCCTTTACCTAATGAGCCATCTCGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PLLLPYGLQLSKSGL*AWWQVPLPNEPSRW Trigger: CCAGCGAGATGGCTCATTAGGTAAAGGCACTTGCCACCAAGCCCAAAGGCCTGACTTTGATAACTGGAGACCATATGGGAGCAGAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | AAGGCTGATCAGGCACAGAGGGCTAACGACATACTGACAACAGCTTaGCAAGCCGCCAGGAAAGGCAAACACAGTCAAGTCAACCGCTTT | + |
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Preference number: 1 (lower is better) Translates to: KADQAQRANDILTTA*QAARKGKHSQVNRF Trigger: AAAGCGGTTGACTTGACTGTGTTTGCCTTTCCTGGCGGCTTGCCAAGCTGTTGTCAGTATGTCGTTAGCCCTCTGTGCCTGATCAGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CCA 90 bp | ACAGAGGTAATATACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTaGGCAGGCTGGACCCCAAACCTATACTTTGCTGCTAGGAAACAA | + |
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Preference number: 1 (lower is better) Translates to: TEVIYKRCNGVQMGR*AGWTPNLYFAARKQ Trigger: TTGTTTCCTAGCAGCAAAGTATAGGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGTATATTACCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR TCA 90 bp | GATCAGTTGGGCTTTGATGGATTCCCGGGTTTTGTAAATATTACCTaGAGCACAATCGCGCGCCCTTCTGTTCGCACGACTTCAACCCCC | + |
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Preference number: 1 (lower is better) Translates to: DQLGFDGFPGFVNIT*STIARPSVRTTSTP Trigger: GGGGGTTGAAGTCGTGCGAACAGAAGGGCGCGCGATTGTGCTTCAGGTAATATTTACAAAACCCGGGAATCCATCAAAGCCCAACTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR TCA 90 bp | CGTTCATTTAAAACAGGTGCAGTGGGGGCGGGAAGTCTGAGATCCTaGGGACCAGTTTCGTACTGTGGAGGATGGGATCTTCAACTCAAA | + |
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Preference number: 1 (lower is better) Translates to: RSFKTGAVGAGSLRS*GPVSYCGGWDLQLK Trigger: TTTGAGTTGAAGATCCCATCCTCCACAGTACGAAACTGGTCCTCAGGATCTCAGACTTCCCGCCCCCACTGCACCTGTTTTAAATGAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | AGCACGGTGTCCTGCTCTGCAGATGATGGCCTTTTTAGCTGCAGTTaGCTGAGTTTAAGAGCCTCAGCTTTGCACAGTGATGAATACCTC | + |
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Preference number: 1 (lower is better) Translates to: STVSCSADDGLFSCS*LSLRASALHSDEYL Trigger: GAGGTATTCATCACTGTGCAAAGCTGAGGCTCTTAAACTCAGGCAACTGCAGCTAAAAAGGCCATCATCTGCAGAGCAGGACACCGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | CGCGCCCTTCTGTTCGCACGACTTCAACCCCCTGACCATACTTCATaGTCTCCCACGGTTTTCCAAGTTGCTATGAAATTAATGAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: RALLFARLQPPDHTS*SPTVFQVAMKLMRK Trigger: TTTCCTCATTAATTTCATAGCAACTTGGAAAACCGTGGGAGAGCATGAAGTATGGTCAGGGGGTTGAAGTCGTGCGAACAGAAGGGCGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR GCA 90 bp | TGGAAACACTACTACCTAAACGGCATTACTGCACAACAGTCCAAATaGCGTCAGACCTATCACAGACTCTCAATATACTCCACTGTTATT | + |
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Preference number: 1 (lower is better) Translates to: WKHYYLNGITAQQSK*RQTYHRLSIYSTVI Trigger: AATAACAGTGGAGTATATTGAGAGTCTGTGATAGGTCTGACGGCATTTGGACTGTTGTGCAGTAATGCCGTTTAGGTAGTAGTGTTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCTGGGGGCGGGAAGTCTaGGATCCTGAGGACCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: TSAVTESRWAGGQAGPQTWGREV*DPEDQF Trigger: AAACTGGTCCTCAGGATCTCAGACTTCCCGCCCCCA...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCAGCAGTCACACTGGGTaGTCCACTCTTCACAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: TSAVTESRWAGGQAGPQTSSHTG*STLHSP Trigger: AGGACTGTGAAGAGTGGACCACCCAGTGTGACTGCT...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCACTCAAACTCTGGACTaGGCTGTCAGCAGCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: TSAVTESRWAGGQAGPQTTQTLD*AVSSSL Trigger: CAGAGAGCTGCTGACAGCCCAGTCCAGAGTTTGAGT...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCTCAGAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCCCTCCATCTCCCAAGTaGTGGGACTACAGGCATGAC | + |
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Preference number: 2 (lower is better) Translates to: LPSEGATWIEHSTPVLLGPPSPK*WDYRHD Trigger: GTCATGCCTGTAGTCCCAGCACTTGGGAGATGGAGG...GCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCTCAGAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCACGCCCTTGAACTCATaGTCCTTCTGCTCTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LPSEGATWIEHSTPVLLGTPLNS*SFCSPS Trigger: GGAAGGAGAGCAGAAGGATCATGAGTTCAAGGGCGT...GCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCTCAGAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCGCGTGTGTGCATGTGTaGAGGTCAGAGGACAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: LPSEGATWIEHSTPVLLGACVHV*RSEDSF Trigger: AAAGCTGTCCTCTGACCTGCACACATGCACACACGC...GCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCTCAGAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCCACAACTCCTTCTCCTaGCACTCGCCAGTGTTTCAT | + |
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Preference number: 2 (lower is better) Translates to: LPSEGATWIEHSTPVLLGHNSFS*HSPVFH Trigger: ATGAAACACTGGCGAGTGGCAGGAGAAGGAGTTGTG...GCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTCAGAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCTTCACAGTCCTACTGTaGACAGCACTTCCAAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: LPSEGATWIEHSTPVLLGFTVLL*TALPSQ Trigger: CTGGCTTGGAAGTGCTGTCCACAGTAGGACTGTGAA...GCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCGTGCGTGCGCCCAGCTCCAGGTGGCTGTGTaGCTGGTAAGGAGTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSLSLSLSRACAQLQVAV*LVRSDC Trigger: GCAGTCACTCCTTACCAGCCACACAGCCACCTGGAG...CTGGGCGCACGCACGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | CAGTGTTTCATGTGCCAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGTAACGGAGTCCAGATaGGCCGGTGGGCAGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: QCFMCQSWLRRECPYVAEVTESR*AGGQAG Trigger: TCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTAC...CTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CAA 90 bp | CCTCTCTTTCCTGTCCCACCTCACTCCTATCATGGAGCACCCTGCTaGGTTCTTTCCACGGGCCACTGGTTTTACCCTTGTGACGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PLFPVPPHSYHGAPC*VLSTGHWFYPCDVE Trigger: TTCCACGTCACAAGGGTAAAACCAGTGGCCCGTGGAAAGAACCAAGCAGGGTGCTCCATGATAGGAGTGAGGTGGGACAGGAAAGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CAA 90 bp | ACAGCACTTCCAAGCCAGAGTGAAGAATGGCACCCCTGTGGGCTGTaGCTCACCCAGGTCCTGTGCTTCGTTCATGGGAACATGACAAAA | + |
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Preference number: 2 (lower is better) Translates to: TALPSQSEEWHPCGL*LTQVLCFVHGNMTK Trigger: TTTTGTCATGTTCCCATGAACGAAGCACAGGACCTGGGTGAGCAACAGCCCACAGGGGTGCCATTCTTCACTCTGGCTTGGAAGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGACAGCTTTCGGGAGTCAGTCCCCTTCTGCTCCCATATGGTCTCCAGTTATACGACTTCAACCCCCTaGCCATACTTCATGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: EDSFRESVPFCSHMVSSYTTSTP*PYFMLS Trigger: GGAGAGCATGAAGTATGGTCAGGGGGTTGAAGTCGT...ATAACTGGAGACCATATGGGAGCAGAAGGGGACTGACTCCCGAAAGCTGTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGTCTACTGTCCCCTaGCCAGCTGTCCCCGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GRIESHILSLSLSLSLSLQSTVP*PAVPAS Trigger: AGAGGCGGGGACAGCTGGTCAGGGGACAGTAGACTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR GCA 90 bp | CAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGACGCCCTTGAACTCGACCTGCCAGGAGATTaGAGGCCCATGAACTATGGA | + |
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Preference number: 2 (lower is better) Translates to: QSWLRRECPYVAEDALELDLPGD*RPMNYG Trigger: TCCATAGTTCATGGGCCTGCAATCTCCTGGCAGGTC...GAGTTCAAGGGCGTCCTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGTTAGGGTCAGTGCTTATAACACAGTGCTCTGCTCCCTCCCACAACTCCGAGTCAGTCCCCTTCTaGTCCCATATGGTCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SWLGSVLITQCSAPSHNSESVPF*SHMVSS Trigger: ACTGGAGACCATATGGGAGCAGAAGGGGACTGACTC...GGAGTTGTGGGAGGGAGCAGAGCACTGTGTTATAAGCACTGACCCTAACCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | CAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGACGCCCTTGAACTCGACACTCAGCTCACATaGAGAAGGCTGATCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: QSWLRRECPYVAEDALELDTQLT*RRLIRH Trigger: GTGCCTGATCAGCCTTCTCCATGTGAGCTGAGTGTC...GAGTTCAAGGGCGTCCTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGACAGCTTTCGGGAGTCAGTCCCCTTCTGCTCCCATATGGTCTCCAGTTATTCAGGCCTTTGGGCTTaGTGGCAAGTGCCTTTACCT | + |
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Preference number: 2 (lower is better) Translates to: EDSFRESVPFCSHMVSSYSGLWA*WQVPLP Trigger: AGGTAAAGGCACTTGCCACCAAGCCCAAAGGCCTGA...ATAACTGGAGACCATATGGGAGCAGAAGGGGACTGACTCCCGAAAGCTGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCGTGCGTGCGCCCAGTCGTTCATGGGAACATaGCAAAACCGTCGTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSLSLSLSRACAQSFMGT*QNRRLE Trigger: CTCAAGACGACGGTTTTGTCATGTTCCCATGAACGA...CTGGGCGCACGCACGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTTCATGTGCCAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGACTTCCAAGCCAGAGTaGAGAATGGCACCCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: QCFMCQSWLRRECPYVAETSKPE*RMAPLW Trigger: CCACAGGGGTGCCATTCTTCACTCTGGCTTGGAAGT...CTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR GCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCCTGTGGGCTGTTaGTCACCCAGGTCCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GRIESHILSLSLSLSLSLTPVGC*SPRSCA Trigger: AGCACAGGACCTGGGTGAGCAACAGCCCACAGGGGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTTTCATGTGCCAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGCTGGTAAGGAGTGACTaGCGTGGAGCAGTCACACTG | + |
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Preference number: 2 (lower is better) Translates to: QCFMCQSWLRRECPYVAELVRSD*RGAVTL Trigger: CAGTGTGACTGCTCCACGGCAGTCACTCCTTACCAG...CTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR CCA 90 bp | AACCCTACAGCTGATTCTGCACTGAAATCTCGACTGCAGAAACCATGTCTTGGTAGCCAGAGTGAAGAATaGCACCCCTGTGGGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: NPTADSALKSRLQKPCLGSQSEE*HPCGLL Trigger: CAACAGCCCACAGGGGTGCCATTCTTCACTCTGGCT...ACCAAGACATGGTTTCTGCAGTCGAGATTTCAGTGCAGAATCAGCTGTAGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGTTTCATGTTTGTGCAGAGCAAACACTGGGACACCACAGTCCAAGCTTACTGTCAGCAGCTCTCTaGGTGACCTTGATGCTCACG | + |
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Preference number: 2 (lower is better) Translates to: MKFHVCAEQTLGHHSPSLLSAAL*VTLMLT Trigger: CGTGAGCATCAAGGTCACTCAGAGAGCTGCTGACAG...TAAGCTTGGACTGTGGTGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR-3UTR TCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCACGGAAGGAGGGATaGTTTGAGAGTGTCGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: GRIESHILSLSLSLSLSLARKEG*FESVVT Trigger: GGTTACGACACTCTCAAATCATCCCTCCTTCCGTGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTCCCATATGGTCTCCAGTTATCAAAGTCAGGCCTTTGGGCTTGGTGGCAATCGTACTGTGGAGGATaGGATCTTCAACTCAAACTC | + |
|
Preference number: 2 (lower is better) Translates to: LLPYGLQLSKSGLWAWWQSYCGG*DLQLKL Trigger: GAGTTTGAGTTGAAGATCCCATCCTCCACAGTACGA...TTGCCACCAAGCCCAAAGGCCTGACTTTGATAACTGGAGACCATATGGGAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAGTCAGGCCTTTaGGCTTGGTGGCAAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVGLSLIFSLSLSLSLSLSKSGL*AWWQVP Trigger: AGGCACTTGCCACCAAGCCCAAAGGCCTGACTTTGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGTTTCATGTGCCAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGTTGGAAGTGATGACATaGCTGCCCACATCTAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: QCFMCQSWLRRECPYVAELEVMT*LPTSKP Trigger: AGGTTTAGATGTGGGCAGGCATGTCATCACTTCCAA...CTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CCA 90 bp | AACCCTACAGCTGATTCTGCACTGAAATCTCGACTGCAGAAACCATGTCTTGGTCTTCAACTCAAACTCTaGACTGGGCTGTCAGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: NPTADSALKSRLQKPCLGLQLKL*TGLSAA Trigger: AGCTGCTGACAGCCCAGTCCAGAGTTTGAGTTGAAG...ACCAAGACATGGTTTCTGCAGTCGAGATTTCAGTGCAGAATCAGCTGTAGGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAGTTTCATGTTTGTGCAGAGCAAACACTGGGACACCACAGTCCAAGCTTACTCACGGACGGGAGATaGATGCAAAAGCTGAGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: MKFHVCAEQTLGHHSPSLLTDGR*MQKLRY Trigger: ATACCTCAGCTTTTGCATTCATCTCCCGTCCGTGAG...TAAGCTTGGACTGTGGTGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGTGCTTCGTTCATaGGAACATGACAAAACCGTC | + |
|
Preference number: 2 (lower is better) Translates to: GRIESHILSLSLSLSLSLPVLRS*EHDKTV Trigger: GACGGTTTTGTCATGTTCCCATGAACGAAGCACAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGAAGTTTCATGTTTGTGCAGAGCAAACACTGGGACACCACAGTCCAAGCTTATTTGTAAATATTACCTaGAGCACAATCGCGCGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: MKFHVCAEQTLGHHSPSLFVNIT*STIARP Trigger: AGGGCGCGCGATTGTGCTTCAGGTAATATTTACAAA...TAAGCTTGGACTGTGGTGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCAGTAACTATCTGCTaGATGGAACAGAGGAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GRIESHILSLSLSLSLSLAVTIC*MEQRKE Trigger: TTCTTTCCTCTGTTCCATTCAGCAGATAGTTACTGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAAGTTTCATGTTTGTaGAGAGCAAACACTGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: GRIESHILSLSLSLSLSLEVSCL*RANTGT Trigger: TGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CCA 90 bp | CACCATGCTTGGAAACACTACTACCTAAACGGCATTACTGCACAACAGTCCAAAAATGAGGAAAGCAAGTaGACACTCAGCTCACATGGA | + |
|
Preference number: 2 (lower is better) Translates to: HHAWKHYYLNGITAQQSKNEESK*TLSSHG Trigger: TCCATGTGAGCTGAGTGTCCACTTGCTTTCCTCATT...TTTGGACTGTTGTGCAGTAATGCCGTTTAGGTAGTAGTGTTTCCAAGCATGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTGCATTAAAGGAGACCTaGCAGGAGATTGCAGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FELNTEVVSFYKHLAFLIALKET*QEIAGP Trigger: TGGGCCTGCAATCTCCTGGCAGGTCTCCTTTAATGC...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTGGAAGTCTGAGATCCTaGGGACCAGTTTCGTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: FELNTEVVSFYKHLAFLIGSLRS*GPVSYC Trigger: ACAGTACGAAACTGGTCCTCAGGATCTCAGACTTCC...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR TCA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTTTGACACTGACTGCATaGAGTTTCATGTTTGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FELNTEVVSFYKHLAFLILTLTA*SFMFVQ Trigger: CTGCACAAACATGAAACTTCATGCAGTCAGTGTCAA...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTTCTCTTGACACTGACTaGATGAAGTTTCATGTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: FELNTEVVSFYKHLAFLISLDTD*MKFHVC Trigger: ACAAACATGAAACTTCATGCAGTCAGTGTCAAGAGA...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | CTCCACGCTCCAGGTGGCTGTGTGGCTGGTAAGGAGTaGCTGCCGTGGAGCAGTCACACTGGGTGGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LHAPGGCVAGKE*LPWSSHTGWST Trigger: AGTGGACCACCCAGTGTGACTGCTCCACGGCAGTCACTCCTTACCAGCCACACAGCCACCTGGAGCGTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | CAGTTCAGCGCTGCCCTCAGAAGGAGCAACCTGGATTaGACACAGCACGCCAGTCCTCCTGGGCTGGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QFSAALRRSNLD*TQHASPPGLEA Trigger: TGCCTCCAGCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAGCGCTGAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR GCA 72 bp | ACGCTCCAGGTGGCTGTGTGGCTGGTAAGGAGTGACTaGCGTGGAGCAGTCACACTGGGTGGTCCACTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TLQVAVWLVRSD*RGAVTLGGPLF Trigger: GAAGAGTGGACCACCCAGTGTGACTGCTCCACGGCAGTCACTCCTTACCAGCCACACAGCCACCTGGAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | GTACATAGCTGGCCAGGCATAGAACACTGTGCAGGCTaGAGACTCCGGGACGCTGAGCAGGGCCAGCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VHSWPGIEHCAG*RLRDAEQGQLQ Trigger: TTGCAGCTGGCCCTGCTCAGCGTCCCGGAGTCTCCAGCCTGCACAGTGTTCTATGCCTGGCCAGCTATGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | GCCAGCTGTGAGGCTGTGAGGATGTCCACCTCACGCTaGGACAACTCAGCTGTCTTCAGAGACTGGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ASCEAVRMSTSR*DNSAVFRDWLS Trigger: GGAGAGCCAGTCTCTGAAGACAGCTGAGTTGTCCCAGCGTGAGGTGGACATCCTCACAGCCTCACAGCTGGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | ACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCTaGAGGCAAAAGGCCATGCCAGGGAGAACTAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TWIEHSTPVLLG*RQKAMPGRTSA Trigger: AGCACTAGTTCTCCCTGGCATGGCCTTTTGCCTCCAGCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | GAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTaGGCTGGAGGCAAAAGGCCATGCCAGGGAGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: EQPGLNTARQSS*AGGKRPCQGEL Trigger: TAGTTCTCCCTGGCATGGCCTTTTGCCTCCAGCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | CACAGTCCTACTGTGGACAGCACTTCCAAGCCAGAGTaGAGAATGGCACCCCTGTGGGCTGTTGCTCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: HSPTVDSTSKPE*RMAPLWAVAHP Trigger: TGGGTGAGCAACAGCCCACAGGGGTGCCATTCTTCACTCTGGCTTGGAAGTGCTGTCCACAGTAGGACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR GCA 72 bp | CAAGCCAGAGTGAAGAATGGCACCCCTGTGGGCTGTTaGTCACCCAGGTCCTGTGCTTCGTTCATGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: QARVKNGTPVGC*SPRSCASFMGT Trigger: TGTTCCCATGAACGAAGCACAGGACCTGGGTGAGCAACAGCCCACAGGGGTGCCATTCTTCACTCTGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR GCA 72 bp | CAGCTGGTTAGGGTCAGTGCTTATAACACAGTGCTCTaGTCCCTCCCACAACTCCTTCTCCTGCCACTCGCC | + |
|
Preference number: 3 (lower is better) Translates to: QLVRVSAYNTVL*SLPQLLLLPLA Trigger: GGCGAGTGGCAGGAGAAGGAGTTGTGGGAGGGAGCAGAGCACTGTGTTATAAGCACTGACCCTAACCAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | CGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTaGACCCCAAACCTATACTTTGCTGCTAGGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: RCNGVQMGRWAG*TPNLYFAARKQ Trigger: TTGTTTCCTAGCAGCAAAGTATAGGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | AAAACAGGTGCAGTGGGGGCGGGAAGTCTGAGATCCTaGGGACCAGTTTCGTACTGTGGAGGATGGGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: KTGAVGAGSLRS*GPVSYCGGWDL Trigger: AAGATCCCATCCTCCACAGTACGAAACTGGTCCTCAGGATCTCAGACTTCCCGCCCCCACTGCACCTGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | CAGGCACAGAGGGCTAACGACATACTGACAACAGCTTaGCAAGCCGCCAGGAAAGGCAAACACAGTCAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: QAQRANDILTTA*QAARKGKHSQV Trigger: GACTTGACTGTGTTTGCCTTTCCTGGCGGCTTGCCAAGCTGTTGTCAGTATGTCGTTAGCCCTCTGTGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCTATGAAATTAATGAGGAAAGCAAGTGGACACTCAGCTCACATGGAGAAGGCCACCCCTGTGGGCTGTaGCTCACCCAGGTCCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CYEINEESKWTLSSHGEGHPCGL*LTQVLC Trigger: GCACAGGACCTGGGTGAGCAACAGCCCACAGGGGTG...GCCTTCTCCATGTGAGCTGAGTGTCCACTTGCTTTCCTCATTAATTTCATAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGTTTCATGTGCCAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGTCTCCTTCCCAAACGTaGGGATTACGGGCCGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: QCFMCQSWLRRECPYVAESPSQT*GLRAAM Trigger: CATGGCGGCCCGTAATCCCAACGTTTGGGAAGGAGA...CTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR GCA 72 bp | AGCTTTCCTTATTCTGAGACTGAAGCCCCGCTGCGGTaGCACAGCTGGTTAGGGTCAGTGCTTATAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: SFPYSETEAPLR*HSWLGSVLITQ Trigger: CTGTGTTATAAGCACTGACCCTAACCAGCTGTGGCACCGCAGCGGGGCTTCAGTCTCAGAATAAGGAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | TGGGCTGTTGCTCACCCAGGTCCTGTGCTTCGTTCATaGGAACATGACAAAACCGTCGTCTTGAGACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WAVAHPGPVLRS*EHDKTVVLRLH Trigger: GTGAAGTCTCAAGACGACGGTTTTGTCATGTTCCCATGAACGAAGCACAGGACCTGGGTGAGCAACAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | CTGTGGAGGATGGGATCTTCAACTCAAACTCTGGACTaGGCTGTCAGCAGCTCTCTGAGTGACCTTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LWRMGSSTQTLD*AVSSSLSDLDA Trigger: AGCATCAAGGTCACTCAGAGAGCTGCTGACAGCCCAGTCCAGAGTTTGAGTTGAAGATCCCATCCTCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | ACAGCTTTCGGGAGTCAGTCCCCTTCTGCTCCCATATaGTCTCCAGTTATCAAAGTCAGGCCTTTGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TAFGSQSPSAPI*SPVIKVRPLGL Trigger: CAAGCCCAAAGGCCTGACTTTGATAACTGGAGACCATATGGGAGCAGAAGGGGACTGACTCCCGAAAGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR GCA 72 bp | ACAACTCCTTCTCCTGCCACTCGCCAGTGTTTCATGTaGCAATCCTGGCTTCGACGTGAATGTCCCTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: TTPSPATRQCFM*QSWLRRECPYV Trigger: TACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTGGCGAGTGGCAGGAGAAGGAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGACCGTCCAAGCCTaGCTAAGTATGCCATGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GRIESHILSLSLSLSLSLVTVQA*LSMPCG Trigger: CCCACATGGCATACTTAGCAAGGCTTGGACGGTCAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | GGCTTTGATGGATTCCCGGGTTTTGTAAATATTACCTaGAGCACAATCGCGCGCCCTTCTGTTCGCACGACT | + |
|
Preference number: 3 (lower is better) Translates to: GFDGFPGFVNIT*STIARPSVRTT Trigger: AGTCGTGCGAACAGAAGGGCGCGCGATTGTGCTTCAGGTAATATTTACAAAACCCGGGAATCCATCAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | ACGTTGGGATTACGGGCCGCCATGTTCCACTGTACTTaGACACGCAGTAACTATCTGCTGAATGGAACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: TLGLRAAMFHCT*TRSNYLLNGTE Trigger: CTCTGTTCCATTCAGCAGATAGTTACTGCGTGTTCAAGTACAGTGGAACATGGCGGCCCGTAATCCCAACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR CCA 72 bp | CTCCCATATGGTCTCCAGTTATCAAAGTCAGGCCTTTaGGCTTGGTGGCAAGTGCCTTTACCTAATGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LPYGLQLSKSGL*AWWQVPLPNEP Trigger: TGGCTCATTAGGTAAAGGCACTTGCCACCAAGCCCAAAGGCCTGACTTTGATAACTGGAGACCATATGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | CGCTCTGGAGTTCAGTGTCTCTTGACACTGACTGCATaGAGTTTCATGTTTGTGCAGAGCAAACACTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: RSGVQCLLTLTA*SFMFVQSKHWD Trigger: GTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCATGCAGTCAGTGTCAAGAGACACTGAACTCCAGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCGTGCGTGCGCCCAGTACTTCTCTCTGACTTaGTACAACTTAAAGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSLSLSLSLSRACAQYFSLT*YNLKKA Trigger: TGCCTTCTTTAAGTTGTACAAAGTCAGAGAGAAGTA...CTGGGCGCACGCACGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | TTTCAAATCCCTCAGTTCACAGCGGAACCCTACAGCTaGTTCTGCACTGAAATCTCGACTGCAGAAACCATG | + |
|
Preference number: 3 (lower is better) Translates to: FQIPQFTAEPYS*FCTEISTAETM Trigger: CATGGTTTCTGCAGTCGAGATTTCAGTGCAGAATCAGCTGTAGGGTTCCGCTGTGAACTGAGGGATTTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR GCA 72 bp | CCATGCTTGGAAACACTACTACCTAAACGGCATTACTaGACAACAGTCCAAATGCCGTCAGACCTATCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PCLETLLPKRHY*TTVQMPSDLSQ Trigger: CTGTGATAGGTCTGACGGCATTTGGACTGTTGTGCAGTAATGCCGTTTAGGTAGTAGTGTTTCCAAGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | GTCAAGTCAACCGCTTTAGTGGCACGGAAGGAGGGATaGTTTGAGAGTGTCGTAACCAGACGTTCATTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VKSTALVARKEG*FESVVTRRSFK Trigger: TTTAAATGAACGTCTGGTTACGACACTCTCAAATCATCCCTCCTTCCGTGCCACTAAAGCGGTTGACTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR GCA 72 bp | TACTACCTAAACGGCATTACTGCACAACAGTCCAAATaGCGTCAGACCTATCACAGACTCTCAATATACTCC | + |
|
Preference number: 3 (lower is better) Translates to: YYLNGITAQQSK*RQTYHRLSIYS Trigger: GGAGTATATTGAGAGTCTGTGATAGGTCTGACGGCATTTGGACTGTTGTGCAGTAATGCCGTTTAGGTAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTAACAGCCCAGTCCTCTaGGAAGTGATGACATGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FELNTEVVSFYKHLAFLINSPVL*EVMTCL Trigger: CAGGCATGTCATCACTTCCAAGAGGACTGGGCTGTT...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR TCA 72 bp | GGTACATATCTCAAATTTCTGCCTTTAAAAAGAAAGTaGGCTTTCCTTATTCTGAGACTGAAGCCCCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTYLKFLPLKRK*AFLILRLKPRC Trigger: GCAGCGGGGCTTCAGTCTCAGAATAAGGAAAGCTCACTTTCTTTTTAAAGGCAGAAATTTGAGATATGTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTCCCCAAACCTATACTTaGCTGCTAGGAAACAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: FELNTEVVSFYKHLAFLIPQTYT*LLGNNS Trigger: TGAATTGTTTCCTAGCAGCAAAGTATAGGTTTGGGG...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCGCCGCTCCCCCAGTCTaGGTAGCTGAGCTTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSAVTESRWAGGQAGPQTAAPPV*VAELPL Trigger: GAGAGGAAGCTCAGCTACCCAGACTGGGGGAGCGGC...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCCAGACCCTGCATTGCTaGAGGTGCTCCTCCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: TSAVTESRWAGGQAGPQTQTLHC*RCSSGT Trigger: AGTGCCGGAGGAGCACCTCCAGCAATGCAGGGTCTG...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CAA 72 bp | CCAGTTCAGCGCTGCCCTCAGAAGGAGCAACCTGGATaGAACACAGCACGCCAGTCCTCCTGGGCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVQRCPQKEQPG*NTARQSSWAGG Trigger: GCCTCCAGCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAGCGCTGAACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCGGGTTAGGAAACCTCTaGAGGTTACACACAGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: TSAVTESRWAGGQAGPQTGLGNL*RLHTAT Trigger: CGTCGCTGTGTGTAACCTGCAGAGGTTTCCTAACCC...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | CAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGACGCCCTTGAACTCCGGACTGGGAGCACCTaGCCGGCCCGGCTACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSWLRRECPYVAEDALELRTGST*PARLHR Trigger: TCTGTGTAGCCGGGCCGGGCAGGTGCTCCCAGTCCG...GAGTTCAAGGGCGTCCTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCCAGTCGGAGCTGCGCTaGTATTCGCCACTTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TSAVTESRWAGGQAGPQTQSELR*YSPLKC Trigger: GCATTTAAGTGGCGAATACCAGCGCAGCTCCGACTG...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | CTGCCCTCAGAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCGTTTCTGGTGGACACTaGTCACAGAAGTCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSEGATWIEHSTPVLLGVSGGH*SQKSQQ Trigger: CTGCTGGGACTTCTGTGAGCAGTGTCCACCAGAAAC...GCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCCAAACCTTTAGACCTTaGGGAGAACAAGAAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSAVTESRWAGGQAGPQTQTFRP*GEQETW Trigger: CCAGGTTTCTTGTTCTCCTCAAGGTCTAAAGGTTTG...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | CAGTGTTTCATGTGCCAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGACACGGAGGCGAAGTaGCCAGGGAGACGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCFMCQSWLRRECPYVAEDTEAK*PGRREQ Trigger: CTGCTCCCGTCTCCCTGGGCACTTCGCCTCCGTGTC...CTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTGGCACATGAAACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | CAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGACGCCCTTGAACTCCTCTCTGGTCCTGTCTaGAGGTCAGCTGCAGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSWLRRECPYVAEDALELLSGPV*RSAAAG Trigger: ACCCGCTGCAGCTGACCTGCAGACAGGACCAGAGAG...GAGTTCAAGGGCGTCCTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | CAATCCTGGCTTCGACGTGAATGTCCCTATGTAGCTGAGGACGCCCTTGAACTCACAGCGACGGCTCTCTaGTCCTGTCTGCAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSWLRRECPYVAEDALELTATAL*SCLQVS Trigger: GCTGACCTGCAGACAGGACCAGAGAGCCGTCGCTGT...GAGTTCAAGGGCGTCCTCAGCTACATAGGGACATTCACGTCGAAGCCAGGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | AGCTGGTTAGGGTCAGTGCTTATAACACAGTGCTCTGCTCCCTCCCACAACTCCGCAGCGGGTTACTTCTaGGTGTGTCACAGTACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWLGSVLITQCSAPSHNSAAGYF*VCHSTG Trigger: GCCCGTACTGTGACACACTCAGAAGTAACCCGCTGC...GGAGTTGTGGGAGGGAGCAGAGCACTGTGTTATAAGCACTGACCCTAACCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | CTGCCCTCAGAAGGAGCAACCTGGATTGAACACAGCACGCCAGTCCTCCTGGGCGATGGACCTTATTTATaGCCTCAGTGTCCGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSEGATWIEHSTPVLLGDGPYL*PQCPKG Trigger: TCCTTTCGGACACTGAGGTCATAAATAAGGTCCATC...GCCCAGGAGGACTGGCGTGCTGTGTTCAATCCAGGTTGCTCCTTCTGAGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | GAGGACAGCTTTCGGGAGTCAGTCCCCTTCTGCTCCCATATGGTCTCCAGTTATGAGAAGCCCAGGGCATaGATGATCTCATGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EDSFRESVPFCSHMVSSYEKPRA*MISCFT Trigger: AGTGAAGCATGAGATCATTCATGCCCTGGGCTTCTC...ATAACTGGAGACCATATGGGAGCAGAAGGGGACTGACTCCCGAAAGCTGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | AGCTGGTTAGGGTCAGTGCTTATAACACAGTGCTCTGCTCCCTCCCACAACTCCGACAGGACTCTGTTCTaGGTGTGGGAACCAGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SWLGSVLITQCSAPSHNSDRTLF*VWEPVI Trigger: AATGACTGGTTCCCACACCCAGAACAGAGTCCTGTC...GGAGTTGTGGGAGGGAGCAGAGCACTGTGTTATAAGCACTGACCCTAACCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | TGCTATGAAATTAATGAGGAAAGCAAGTGGACACTCAGCTCACATGGAGAAGGCCCCAGTCTGGGTAGCTaGGCTTCCTCTCGCACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CYEINEESKWTLSSHGEGPSLGS*ASSRTA Trigger: AGCAGTGCGAGAGGAAGCTCAGCTACCCAGACTGGG...GCCTTCTCCATGTGAGCTGAGTGTCCACTTGCTTTCCTCATTAATTTCATAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | AGGGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCAAGCACACCCACTaGTCCACACGGCCACTTACC | + |
|
Preference number: 4 (lower is better) Translates to: RVGLSLIFSLSLSLSLSLVKHTH*STRPLT Trigger: GGTAAGTGGCCGTGTGGAGCAGTGGGTGTGCTTGAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | AACCCTACAGCTGATTCTGCACTGAAATCTCGACTGCAGAAACCATGTCTTGGTGGCTGCACCTCTCAGTaGCCAGAGCACCCACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NPTADSALKSRLQKPCLGGCTSQ*PEHPHK Trigger: TTTATGTGGGTGCTCTGGCCACTGAGAGGTGCAGCC...ACCAAGACATGGTTTCTGCAGTCGAGATTTCAGTGCAGAATCAGCTGTAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | CTGCTCCCATATGGTCTCCAGTTATCAAAGTCAGGCCTTTGGGCTTGGTGGCAACAGCCATGCTGTAATTaGCTTTGTACCAGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPYGLQLSKSGLWAWWQQPCCN*LCTSQC Trigger: ACACTGGCTGGTACAAAGCCAATTACAGCATGGCTG...TTGCCACCAAGCCCAAAGGCCTGACTTTGATAACTGGAGACCATATGGGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| 3UTR CAA 72 bp | TGGGCCGGTGGGCAGGCTGGACCCCAAACCTATACTTaGCTGCTAGGAAACAATTCAGATGATCTTGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WAGGQAGPQTYT*LLGNNSDDLVL Trigger: TAAGACAAGATCATCTGAATTGTTTCCTAGCAGCAAAGTATAGGTTTGGGGTCCAGCCTGCCCACCGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATAAAGAACGAAGTCTaGGTCCCGCACACCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRIESHILSLSLSLSLSLIKNEV*VPHTLW Trigger: CCAGAGGGTGTGCGGGACGCAGACTTCGTTCTTTAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGCAGGTCAGCTaGAGCGGGTTACTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRIESHILSLSLSLSLSLCLQVS*SGLLLS Trigger: ACTCAGAAGTAACCCGCTGCAGCTGACCTGCAGACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAGATGATGTTTTCGTaGCTGCACCTCTCAGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRIESHILSLSLSLSLSLEMMFS*LHLSVA Trigger: GGCCACTGAGAGGTGCAGCCACGAAAACATCATCTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | ATGAAGTTTCATGTTTGTGCAGAGCAAACACTGGGACACCACAGTCCAAGCTTAAGTCAGGTTGGCAGCTaGAGGGTCTGTTTCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKFHVCAEQTLGHHSPSLSQVGS*RVCFWW Trigger: CCACCAGAAACAGACCCTCCAGCTGCCAACCTGACT...TAAGCTTGGACTGTGGTGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | CACCATGCTTGGAAACACTACTACCTAAACGGCATTACTGCACAACAGTCCAAACCGCAGGTATCCCAGTaGGCTCATCAAAGTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HHAWKHYYLNGITAQQSKPQVSQ*AHQSTG Trigger: ACCAGTACTTTGATGAGCTCACTGGGATACCTGCGG...TTTGGACTGTTGTGCAGTAATGCCGTTTAGGTAGTAGTGTTTCCAAGCATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | TGCTATGAAATTAATGAGGAAAGCAAGTGGACACTCAGCTCACATGGAGAAGGCGGGCCTGTCCATTTTTaGCTCCTGCTGACAATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CYEINEESKWTLSSHGEGGPVHF*LLLTIG Trigger: GCCTATTGTCAGCAGGAGGCAAAAATGGACAGGCCC...GCCTTCTCCATGTGAGCTGAGTGTCCACTTGCTTTCCTCATTAATTTCATAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | GAGGACAGCTTTCGGGAGTCAGTCCCCTTCTGCTCCCATATGGTCTCCAGTTATTTAAACAGCTCTGGTTaGTTTTCCAGGATTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: EDSFRESVPFCSHMVSSYLNSSG*FSRILQ Trigger: CTGTAGAATCCTGGAAAACCAACCAGAGCTGTTTAA...ATAACTGGAGACCATATGGGAGCAGAAGGGGACTGACTCCCGAAAGCTGTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | TGCTATGAAATTAATGAGGAAAGCAAGTGGACACTCAGCTCACATGGAGAAGGCAGGGTCTGTTTCTGGTaGACACTGCTCACAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CYEINEESKWTLSSHGEGRVCFW*TLLTEV Trigger: GACTTCTGTGAGCAGTGTCCACCAGAAACAGACCCT...GCCTTCTCCATGTGAGCTGAGTGTCCACTTGCTTTCCTCATTAATTTCATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | ATGAAGTTTCATGTTTGTGCAGAGCAAACACTGGGACACCACAGTCCAAGCTTATGGAGGGTCTGTTTCTaGTGGACACTGCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MKFHVCAEQTLGHHSPSLWRVCF*WTLLTE Trigger: TTCTGTGAGCAGTGTCCACCAGAAACAGACCCTCCA...TAAGCTTGGACTGTGGTGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | AGGGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTACAGCTCTTCCTaGCAAATTCACAGCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVGLSLIFSLSLSLSLSLIYSSS*QIHSPV Trigger: GACTGGGCTGTGAATTTGTCAGGAAGAGCTGTAAAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | AGGGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCTTTGCCTGTGCTaGTCAATCCAGAATTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGLSLIFSLSLSLSLSLLLCLC*SIQNLQ Trigger: CTGTAAATTCTGGATTGATCAGCACAGGCAAAGGAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGAGTTTCTCAGCCATaGTGTAATTGGCTTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: GRIESHILSLSLSLSLSLRVSQP*CNWLCT Trigger: GGTACAAAGCCAATTACAGCATGGCTGAGAAACTCG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR TCA 90 bp | AGGGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGTGACATaGTTTGTCTTAAGATGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RVGLSLIFSLSLSLSLSLSLFVT*FVLRWT Trigger: GGTCCATCTTAAGACAAATCATGTCACGAAGAGAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGAGATACACAGTGTaGCGAACTATCTTGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: GRIESHILSLSLSLSLSLRRYTV*RTILLS Trigger: AGATAACAAGATAGTTCGCCACACTGTGTATCTCCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CCA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTTCCTTCCGTAGGTACTaGTTTGTCGCACATTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FELNTEVVSFYKHLAFLISFRRY*FVAHCL Trigger: CAGACAATGTGCGACAAACCAGTACCTACGGAAGGA...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR GCA 90 bp | TTTGAACTGAACACCGAGGTAGTCAGTTTTTATAAACACTTGGCTTTTCTGATTCTGCTGACAATAGGCTaGGTAGGAGATGATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FELNTEVVSFYKHLAFLILLTIG*VGDDVF Trigger: GAAAACATCATCTCCTACGCAGCCTATTGTCAGCAG...AATCAGAAAAGCCAAGTGTTTATAAAAACTGACTACCTCGGTGTTCAGTTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CAA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCCGTGCCCATCCCGCCTaGGTTTTCAAGCTCCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSAVTESRWAGGQAGPQTRAHPA*VFKLHA Trigger: GGCATGGAGCTTGAAAACCAAGGCGGGATGGGCACG...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | CCACACGGCCACTTACCCTCTCGGCAGACCCTGCATTGCTGGAGGTaGTCCTCCGGCACTATAACAGGCCCGCACTTGGTATGCACCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHGHLPSRQTLHCWR*SSGTITGPHLVCTA Trigger: TGCGGTGCATACCAAGTGCGGGCCTGTTATAGTGCCGGAGGAGCACCTCCAGCAATGCAGGGTCTGCCGAGAGGGTAAGTGGCCGTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | AACGAAGTCTGCGTCCCGCACACCCTCTGGGTCAAGCACACCCACTaGTCCACACGGCCACTTACCCTCTCGGCAGACCCTGCATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NEVCVPHTLWVKHTH*STRPLTLSADPALL Trigger: CAGCAATGCAGGGTCTGCCGAGAGGGTAAGTGGCCGTGTGGAGCAGTGGGTGTGCTTGACCCAGAGGGTGTGCGGGACGCAGACTTCGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CAA 90 bp | ACAAGCGCTGTAACGGAGTCCAGATGGGCCGGTGGGCAGGCTGGACCCCAAACCCGGCACCTGCCTCCTTaGCCTGTGCTGATCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSAVTESRWAGGQAGPQTRHLPP*PVLINP Trigger: TGGATTGATCAGCACAGGCAAAGGAGGCAGGTGCCG...GGTTTGGGGTCCAGCCTGCCCACCGGCCCATCTGGACTCCGTTACAGCGCTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 90 bp | CGGCTCTCTGGTCCTGTCTGCAGGTCAGCTGCAGCGGGTTACTTCTaGGTGTGTCACAGTACGGGCTCGGCACCTGCCTCCTTTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLSGPVCRSAAAGYF*VCHSTGSAPASFAC Trigger: ACAGGCAAAGGAGGCAGGTGCCGAGCCCGTACTGTGACACACTCAGAAGTAACCCGCTGCAGCTGACCTGCAGACAGGACCAGAGAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | ACTGCTCCACACGGCCACTTACCCTCTCGGCAGACCCTGCATTGCTaGAGGTGCTCCTCCGGCACTATAACAGGCCCGCACTTGGTATGC | + |
|
Preference number: 5 (lower is better) Translates to: TAPHGHLPSRQTLHC*RCSSGTITGPHLVC Trigger: GCATACCAAGTGCGGGCCTGTTATAGTGCCGGAGGAGCACCTCCAGCAATGCAGGGTCTGCCGAGAGGGTAAGTGGCCGTGTGGAGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | GCTGCACCTCTCAGTGGCCAGAGCACCCACATAAAGAACGAAGTCTaGGTCCCGCACACCCTCTGGGTCAAGCACACCCACTGCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AAPLSGQSTHIKNEV*VPHTLWVKHTHCST Trigger: TGTGGAGCAGTGGGTGTGCTTGACCCAGAGGGTGTGCGGGACGCAGACTTCGTTCTTTATGTGGGTGCTCTGGCCACTGAGAGGTGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | AGGTTACACACAGCGACGGCTCTCTGGTCCTGTCTGCAGGTCAGCTaGAGCGGGTTACTTCTGAGTGTGTCACAGTACGGGCTCGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLHTATALWSCLQVS*SGLLLSVSQYGLGT Trigger: GGTGCCGAGCCCGTACTGTGACACACTCAGAAGTAACCCGCTGCAGCTGACCTGCAGACAGGACCAGAGAGCCGTCGCTGTGTGTAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | CAGAGCACCCACATAAAGAACGAAGTCTGCGTCCCGCACACCCTCTaGGTCAAGCACACCCACTGCTCCACACGGCCACTTACCCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSTHIKNEVCVPHTL*VKHTHCSTRPLTLS Trigger: CGAGAGGGTAAGTGGCCGTGTGGAGCAGTGGGTGTGCTTGACCCAGAGGGTGTGCGGGACGCAGACTTCGTTCTTTATGTGGGTGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | CAGAGGAAGGGCTCGAGTCAGGTTGGCAGCTGGAGGGTCTGTTTCTaGTGGACACTGCTCACAGAAGTCCCAGCAGGAAGGGCACAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRKGSSQVGSWRVCF*WTLLTEVPAGRAQQ Trigger: CTGCTGTGCCCTTCCTGCTGGGACTTCTGTGAGCAGTGTCCACCAGAAACAGACCCTCCAGCTGCCAACCTGACTCGAGCCCTTCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | GCAGGAACAGAGATCCAGAGGAAGGGCTCGAGTCAGGTTGGCAGCTaGAGGGTCTGTTTCTGGTGGACACTGCTCACAGAAGTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGTEIQRKGSSQVGS*RVCFWWTLLTEVPA Trigger: TGCTGGGACTTCTGTGAGCAGTGTCCACCAGAAACAGACCCTCCAGCTGCCAACCTGACTCGAGCCCTTCCTCTGGATCTCTGTTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | AAGGGGTTAGGAAACCTCTGCAGGTTACACACAGCGACGGCTCTCTaGTCCTGTCTGCAGGTCAGCTGCAGCGGGTTACTTCTGAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: KGLGNLCRLHTATAL*SCLQVSCSGLLLSV Trigger: CACACTCAGAAGTAACCCGCTGCAGCTGACCTGCAGACAGGACCAGAGAGCCGTCGCTGTGTGTAACCTGCAGAGGTTTCCTAACCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | ACCTTGAGGAGAACAAGAAACCTGGTAGCAGCCGCTCCCCCAGTCTaGGTAGCTGAGCTTCCTCTCGCACTGCTCCATGATGAACGCAGA | + |
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Preference number: 5 (lower is better) Translates to: TLRRTRNLVAAAPPV*VAELPLALLHDERR Trigger: TCTGCGTTCATCATGGAGCAGTGCGAGAGGAAGCTCAGCTACCCAGACTGGGGGAGCGGCTGCTACCAGGTTTCTTGTTCTCCTCAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 90 bp | GTCTTAAGATGGACCTTATTTATGACCTCAGTGTCCGAAAGGACGTaGTGGCGACACGGAGGCGAAGTGCCCAGGGAGACGGGAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VLRWTLFMTSVSERT*WRHGGEVPRETGAA Trigger: AGCTGCTCCCGTCTCCCTGGGCACTTCGCCTCCGTGTCGCCATCACGTCCTTTCGGACACTGAGGTCATAAATAAGGTCCATCTTAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | TGCTGGAGGTGCTCCTCCGGCACTATAACAGGCCCGCACTTGGTATaGACCGCACACTCTCCAGTACAGTATCTGTGTGGATCGTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: CWRCSSGTITGPHLV*TAHSPVQYLCGSFS Trigger: GGAAAACGATCCACACAGATACTGTACTGGAGAGTGTGCGGTGCATACCAAGTGCGGGCCTGTTATAGTGCCGGAGGAGCACCTCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | TGGGAACCAGTCATTGCTTCATTCTCGAGCAAGCGCTTCTCCCAGTaGTTCAGCTCCGTGCCCATCCCGCCTTGGTTTTCAAGCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: WEPVIASFSSKRFSQ*FSSVPIPPWFSSSM Trigger: CATGGAGCTTGAAAACCAAGGCGGGATGGGCACGGAGCTGAACCACTGGGAGAAGCGCTTGCTCGAGAATGAAGCAATGACTGGTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | CGAGTGCGGCCCGTACTGCTCTGCCCCGTAGTTCTTAAACAGCTCTaGTTGGTTTTCCAGGATTCTACAGTCGGAGCTGCGCTGGTATTC | + |
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Preference number: 5 (lower is better) Translates to: RVRPVLLCPVVLKQL*LVFQDSTVGAALVF Trigger: GAATACCAGCGCAGCTCCGACTGTAGAATCCTGGAAAACCAACCAGAGCTGTTTAAGAACTACGGGGCAGAGCAGTACGGGCCGCACTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | CAGCAGGTTTCCATTGTGAATCCAGCCGTTCATCTGAATTCGGACTaGGAGCACCTGCCCGGCCCGGCTACACAGATAGGAAGTGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QQVSIVNPAVHLNSD*EHLPGPATQIGSVL Trigger: CAAGACACTTCCTATCTGTGTAGCCGGGCCGGGCAGGTGCTCCCAGTCCGAATTCAGATGAACGGCTGGATTCACAATGGAAACCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 90 bp | GCCTGTCCATTTTTGCCTCCTGCTGACAATAGGCTGCGTAGGAGATaGTGTTTTCGTGGCTGCACCTCTCAGTGGCCAGAGCACCCACAT | + |
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Preference number: 5 (lower is better) Translates to: ACPFLPPADNRLRRR*CFRGCTSQWPEHPH Trigger: ATGTGGGTGCTCTGGCCACTGAGAGGTGCAGCCACGAAAACATCATCTCCTACGCAGCCTATTGTCAGCAGGAGGCAAAAATGGACAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | TCCTGCTATGGGCCTGTCCATTTTTGCCTCCTGCTGACAATAGGCTaGGTAGGAGATGATGTTTTCGTGGCTGCACCTCTCAGTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SCYGPVHFCLLLTIG*VGDDVFVAAPLSGQ Trigger: CTGGCCACTGAGAGGTGCAGCCACGAAAACATCATCTCCTACGCAGCCTATTGTCAGCAGGAGGCAAAAATGGACAGGCCCATAGCAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | TCATCAAAGTACTGGTACTCGGGTGGTAAGGGGTTAGGAAACCTCTaGAGGTTACACACAGCGACGGCTCTCTGGTCCTGTCTGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SSKYWYSGGKGLGNL*RLHTATALWSCLQV Trigger: GACCTGCAGACAGGACCAGAGAGCCGTCGCTGTGTGTAACCTGCAGAGGTTTCCTAACCCCTTACCACCCGAGTACCAGTACTTTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | CGCAGACTTCTGAAGCAGACAGACCGAGTGCGGCCCGTACTGCTCTaGCCCGTAGTTCTTAAACAGCTCTGGTTGGTTTTCCAGGATTCT | + |
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Preference number: 5 (lower is better) Translates to: RRLLKQTDRVRPVLL*PVVLKQLWLVFQDS Trigger: AGAATCCTGGAAAACCAACCAGAGCTGTTTAAGAACTACGGGGCAGAGCAGTACGGGCCGCACTCGGTCTGTCTGCTTCAGAAGTCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 90 bp | CAAATTCACAGCCCAGTCCTCGGCCCCAGTCGAGTTTCTCAGCCATaGTGTAATTGGCTTTGTACCAGCCAGTGTCCTCCATTAACGCCA | + |
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Preference number: 5 (lower is better) Translates to: QIHSPVLGPSRVSQP*CNWLCTSQCPPLTP Trigger: TGGCGTTAATGGAGGACACTGGCTGGTACAAAGCCAATTACAGCATGGCTGAGAAACTCGACTGGGGCCGAGGACTGGGCTGTGAATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CAA 90 bp | ATGAAGTTTCATGTTTGTGCAGAGCAAACACTGGGACACCACAGTCCAAGCTTAAGGGCTCGAGTCAGGTaGGCAGCTGGAGGGTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: MKFHVCAEQTLGHHSPSLRARVR*AAGGSV Trigger: AACAGACCCTCCAGCTGCCAACCTGACTCGAGCCCT...TAAGCTTGGACTGTGGTGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CAA 90 bp | GGTAGGATTGAGTCTCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGCCTGTCCATTTTaGCCTCCTGCTGACAATAGG | + |
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Preference number: 5 (lower is better) Translates to: GRIESHILSLSLSLSLSLWACPF*PPADNR Trigger: CCTATTGTCAGCAGGAGGCAAAAATGGACAGGCCCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATGAGACTCAATCCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 90 bp | TCTCCAGTACAGTATCTGTGTGGATCGTTTTCCTTCCGTAGGTACTaGTTTGTCGCACATTGTCTGCTAAGTAAGATCCTGCCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPVQYLCGSFSFRRY*FVAHCLLSKILPAG Trigger: ACCTGCTGGCAGGATCTTACTTAGCAGACAATGTGCGACAAACCAGTACCTACGGAAGGAAAACGATCCACACAGATACTGTACTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CAA 90 bp | ATGAAGTTTCATGTTTGTGCAGAGCAAACACTGGGACACCACAGTCCAAGCTTAGTGTGGCGAACTATCTaGTTATCTCGAACATTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MKFHVCAEQTLGHHSPSLVWRTI*LSRTFH Trigger: GTGGAATGTTCGAGATAACAAGATAGTTCGCCACAC...TAAGCTTGGACTGTGGTGTCCCAGTGTTTGCTCTGCACAAACATGAAACTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS-3UTR CAA 90 bp | CACCATGCTTGGAAACACTACTACCTAAACGGCATTACTGCACAACAGTCCAAACTTAAACAGCTCTGGTaGGTTTTCCAGGATTCTACA | + |
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Preference number: 5 (lower is better) Translates to: HHAWKHYYLNGITAQQSKLKQLW*VFQDST Trigger: TGTAGAATCCTGGAAAACCAACCAGAGCTGTTTAAG...TTTGGACTGTTGTGCAGTAATGCCGTTTAGGTAGTAGTGTTTCCAAGCATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 90 bp | ATGGTCTTGATTCGTAAATGCCCGTCAGCATCTCTCTTCGTGACATaGTTTGTCTTAAGATGGACCTTATTTATGACCTCAGTGTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: MVLIRKCPSASLFVT*FVLRWTLFMTSVSE Trigger: TTCGGACACTGAGGTCATAAATAAGGTCCATCTTAAGACAAATCATGTCACGAAGAGAGATGCTGACGGGCATTTACGAATCAAGACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 72 bp | TGCGTCCCGCACACCCTCTGGGTCAAGCACACCCACTaGTCCACACGGCCACTTACCCTCTCGGCAGACCCT | + |
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Preference number: 6 (lower is better) Translates to: CVPHTLWVKHTH*STRPLTLSADP Trigger: AGGGTCTGCCGAGAGGGTAAGTGGCCGTGTGGAGCAGTGGGTGTGCTTGACCCAGAGGGTGTGCGGGACGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | CACGGCCACTTACCCTCTCGGCAGACCCTGCATTGCTaGAGGTGCTCCTCCGGCACTATAACAGGCCCGCAC | + |
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Preference number: 6 (lower is better) Translates to: HGHLPSRQTLHC*RCSSGTITGPH Trigger: GTGCGGGCCTGTTATAGTGCCGGAGGAGCACCTCCAGCAATGCAGGGTCTGCCGAGAGGGTAAGTGGCCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CAA 90 bp | ACCCACTGCTCCACACGGCCACTTACCCTCTCGGCAGACCCTGCATaGCTGGAGGTGCTCCTCCGGCACTATAACAGGCCCGCACTTGGT | + |
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Preference number: 6 (lower is better) Translates to: THCSTRPLTLSADPA*LEVLLRHYNRPALG Trigger: ACCAAGTGCGGGCCTGTTATAGTGCCGGAGGAGCACCTCCAGCAATGCAGGGTCTGCCGAGAGGGTAAGTGGCCGTGTGGAGCAGTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 72 bp | GGTCCTGTCTGCAGGTCAGCTGCAGCGGGTTACTTCTaGGTGTGTCACAGTACGGGCTCGGCACCTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GPVCRSAAAGYF*VCHSTGSAPAS Trigger: GGAGGCAGGTGCCGAGCCCGTACTGTGACACACTCAGAAGTAACCCGCTGCAGCTGACCTGCAGACAGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CAA 72 bp | TCCACACGGCCACTTACCCTCTCGGCAGACCCTGCATaGCTGGAGGTGCTCCTCCGGCACTATAACAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: STRPLTLSADPA*LEVLLRHYNRP Trigger: GGGCCTGTTATAGTGCCGGAGGAGCACCTCCAGCAATGCAGGGTCTGCCGAGAGGGTAAGTGGCCGTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 72 bp | CTCAGTGGCCAGAGCACCCACATAAAGAACGAAGTCTaGGTCCCGCACACCCTCTGGGTCAAGCACACCCAC | + |
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Preference number: 6 (lower is better) Translates to: LSGQSTHIKNEV*VPHTLWVKHTH Trigger: GTGGGTGTGCTTGACCCAGAGGGTGTGCGGGACGCAGACTTCGTTCTTTATGTGGGTGCTCTGGCCACTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 72 bp | ACAGCGACGGCTCTCTGGTCCTGTCTGCAGGTCAGCTaGAGCGGGTTACTTCTGAGTGTGTCACAGTACGGG | + |
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Preference number: 6 (lower is better) Translates to: TATALWSCLQVS*SGLLLSVSQYG Trigger: CCCGTACTGTGACACACTCAGAAGTAACCCGCTGCAGCTGACCTGCAGACAGGACCAGAGAGCCGTCGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | GGCTCGAGTCAGGTTGGCAGCTGGAGGGTCTGTTTCTaGTGGACACTGCTCACAGAAGTCCCAGCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GSSQVGSWRVCF*WTLLTEVPAGR Trigger: CCTTCCTGCTGGGACTTCTGTGAGCAGTGTCCACCAGAAACAGACCCTCCAGCTGCCAACCTGACTCGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | CACATAAAGAACGAAGTCTGCGTCCCGCACACCCTCTaGGTCAAGCACACCCACTGCTCCACACGGCCACTT | + |
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Preference number: 6 (lower is better) Translates to: HIKNEVCVPHTL*VKHTHCSTRPL Trigger: AAGTGGCCGTGTGGAGCAGTGGGTGTGCTTGACCCAGAGGGTGTGCGGGACGCAGACTTCGTTCTTTATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | GGAAACCTCTGCAGGTTACACACAGCGACGGCTCTCTaGTCCTGTCTGCAGGTCAGCTGCAGCGGGTTACTT | + |
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Preference number: 6 (lower is better) Translates to: GNLCRLHTATAL*SCLQVSCSGLL Trigger: AAGTAACCCGCTGCAGCTGACCTGCAGACAGGACCAGAGAGCCGTCGCTGTGTGTAACCTGCAGAGGTTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CAA 90 bp | GTGCGGCCCGTACTGCTCTGCCCCGTAGTTCTTAAACAGCTCTGGTaGGTTTTCCAGGATTCTACAGTCGGAGCTGCGCTGGTATTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: VRPVLLCPVVLKQLW*VFQDSTVGAALVFA Trigger: GGCGAATACCAGCGCAGCTCCGACTGTAGAATCCTGGAAAACCAACCAGAGCTGTTTAAGAACTACGGGGCAGAGCAGTACGGGCCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 72 bp | TGGACCTTATTTATGACCTCAGTGTCCGAAAGGACGTaGTGGCGACACGGAGGCGAAGTGCCCAGGGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: WTLFMTSVSERT*WRHGGEVPRET Trigger: CGTCTCCCTGGGCACTTCGCCTCCGTGTCGCCATCACGTCCTTTCGGACACTGAGGTCATAAATAAGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 72 bp | AGCCCAGTCCTCGGCCCCAGTCGAGTTTCTCAGCCATaGTGTAATTGGCTTTGTACCAGCCAGTGTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SPVLGPSRVSQP*CNWLCTSQCPP Trigger: TGGAGGACACTGGCTGGTACAAAGCCAATTACAGCATGGCTGAGAAACTCGACTGGGGCCGAGGACTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | AGAACAAGAAACCTGGTAGCAGCCGCTCCCCCAGTCTaGGTAGCTGAGCTTCCTCTCGCACTGCTCCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: RTRNLVAAAPPV*VAELPLALLHD Trigger: ATCATGGAGCAGTGCGAGAGGAAGCTCAGCTACCCAGACTGGGGGAGCGGCTGCTACCAGGTTTCTTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | TCCATTGTGAATCCAGCCGTTCATCTGAATTCGGACTaGGAGCACCTGCCCGGCCCGGCTACACAGATAGGA | + |
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Preference number: 6 (lower is better) Translates to: SIVNPAVHLNSD*EHLPGPATQIG Trigger: TCCTATCTGTGTAGCCGGGCCGGGCAGGTGCTCCCAGTCCGAATTCAGATGAACGGCTGGATTCACAATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | GAGATCCAGAGGAAGGGCTCGAGTCAGGTTGGCAGCTaGAGGGTCTGTTTCTGGTGGACACTGCTCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EIQRKGSSQVGS*RVCFWWTLLTE Trigger: TTCTGTGAGCAGTGTCCACCAGAAACAGACCCTCCAGCTGCCAACCTGACTCGAGCCCTTCCTCTGGATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | AGGAACAGAGATCCAGAGGAAGGGCTCGAGTCAGGTTaGCAGCTGGAGGGTCTGTTTCTGGTGGACACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RNRDPEEGLESG*QLEGLFLVDTA Trigger: AGCAGTGTCCACCAGAAACAGACCCTCCAGCTGCCAACCTGACTCGAGCCCTTCCTCTGGATCTCTGTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CAA 72 bp | ACACACAGAAGGAACCCCGCCAGCAGAGGAAACAGATaGCCGAGGAGGAGCCAAAGTGTGACCACCAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: THRRNPASRGNR*PRRSQSVTTRL Trigger: TAGCCTGGTGGTCACACTTTGGCTCCTCCTCGGCAATCTGTTTCCTCTGCTGGCGGGGTTCCTTCTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CAA 90 bp | CTAGAAGAGCAGGAACAGAGATCCAGAGGAAGGGCTCGAGTCAGGTaGGCAGCTGGAGGGTCTGTTTCTGGTGGACACTGCTCACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LEEQEQRSRGRARVR*AAGGSVSGGHCSQK Trigger: CTTCTGTGAGCAGTGTCCACCAGAAACAGACCCTCCAGCTGCCAACCTGACTCGAGCCCTTCCTCTGGATCTCTGTTCCTGCTCTTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | GTCATTGCTTCATTCTCGAGCAAGCGCTTCTCCCAGTaGTTCAGCTCCGTGCCCATCCCGCCTTGGTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VIASFSSKRFSQ*FSSVPIPPWFS Trigger: TGAAAACCAAGGCGGGATGGGCACGGAGCTGAACCACTGGGAGAAGCGCTTGCTCGAGAATGAAGCAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 72 bp | CGCCATAGTAAGGCAGATCCTCCGCAGGTATCCCAGTaGGCTCATCAAAGTACTGGTACTCGGGTGGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RHSKADPPQVSQ*AHQSTGTRVVR Trigger: CCTTACCACCCGAGTACCAGTACTTTGATGAGCTCACTGGGATACCTGCGGAGGATCTGCCTTACTATGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS GCA 72 bp | GGGCCTGTCCATTTTTGCCTCCTGCTGACAATAGGCTaGGTAGGAGATGATGTTTTCGTGGCTGCACCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPVHFCLLLTIG*VGDDVFVAAPL Trigger: GAGAGGTGCAGCCACGAAAACATCATCTCCTACGCAGCCTATTGTCAGCAGGAGGCAAAAATGGACAGGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | CTCGGCCCCAGTCGAGTTTCTCAGCCATGCTGTAATTaGCTTTGTACCAGCCAGTGTCCTCCATTAACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGPSRVSQPCCN*LCTSQCPPLTP Trigger: TGGCGTTAATGGAGGACACTGGCTGGTACAAAGCCAATTACAGCATGGCTGAGAAACTCGACTGGGGCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | TCCTCCGCAGGTATCCCAGTGAGCTCATCAAAGTACTaGTACTCGGGTGGTAAGGGGTTAGGAAACCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSAGIPVSSSKY*YSGGKGLGNLC Trigger: GCAGAGGTTTCCTAACCCCTTACCACCCGAGTACCAGTACTTTGATGAGCTCACTGGGATACCTGCGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS TCA 72 bp | TTTTTGCCTCCTGCTGACAATAGGCTGCGTAGGAGATaGTGTTTTCGTGGCTGCACCTCTCAGTGGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLPPADNRLRRR*CFRGCTSQWPE Trigger: CTCTGGCCACTGAGAGGTGCAGCCACGAAAACATCATCTCCTACGCAGCCTATTGTCAGCAGGAGGCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | CAGTATCTGTGTGGATCGTTTTCCTTCCGTAGGTACTaGTTTGTCGCACATTGTCTGCTAAGTAAGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QYLCGSFSFRRY*FVAHCLLSKIL Trigger: CAGGATCTTACTTAGCAGACAATGTGCGACAAACCAGTACCTACGGAAGGAAAACGATCCACACAGATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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| CDS CCA 72 bp | TCAACAACACGCGGTGTTACTAGGAGATACACAGTGTaGCGAACTATCTTGTTATCTCGAACATTCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: STTRGVTRRYTV*RTILLSRTFHN Trigger: ATTGTGGAATGTTCGAGATAACAAGATAGTTCGCCACACTGTGTATCTCCTAGTAACACCGCGTGTTGTTGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023497.3 |
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