Pregenerated sensors for LMF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022614Ensembl transcript IDs: ENSMUST00000023283.6, ENSMUST00000229111.2
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCCGTCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACAGTGGCTaGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTC | + |
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Preference number: 1 (lower is better) Translates to: SRLHLPWQDWLRHSG*AVSRCVLGSRGSDF Trigger: GAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 90 bp | ATTCCTCGGGGGTGGCGTTCCCGTCTGCATCTGCCCTGGCAGGACTaGCTAAGGCACAGTGGCTGGGCTGTGTCACGGTGTGTGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: IPRGWRSRLHLPWQD*LRHSGWAVSRCVLG Trigger: TCCCAGCACACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACGGGAACGCCACCCCCGAGGAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 90 bp | ACACCCAGCATTCCTCGGGGGTGGCGTTCCCGTCTGCATCTGCCCTaGCAGGACTGGCTAAGGCACAGTGGCTGGGCTGTGTCACGGTGT | + |
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Preference number: 1 (lower is better) Translates to: TPSIPRGWRSRLHLP*QDWLRHSGWAVSRC Trigger: ACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACGGGAACGCCACCCCCGAGGAATGCTGGGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 90 bp | CCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCAAAGTaGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTATGGT | + |
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Preference number: 1 (lower is better) Translates to: PLAPVLSRFSSPSPK*GWVGTPDSGLCIYG Trigger: ACCATAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGGGAGCTAAACCTGCTGAGGACAGGAGCCAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 90 bp | GCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCAAAGTGGGGCTaGGTAGGAACTCCAGACTCAGGCCTGTGCATCTATGGTACACTG | + |
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Preference number: 1 (lower is better) Translates to: APVLSRFSSPSPKWG*VGTPDSGLCIYGTL Trigger: CAGTGTACCATAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGGGAGCTAAACCTGCTGAGGACAGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR TCA 90 bp | CTGTGCATCTATGGTACACTGATTACAGTGTTTCAGGAGAAGTCCTaGGCTAGGCCGCAGGCCCACTTCTGGGTTGATTCCAAGACAGTA | + |
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Preference number: 1 (lower is better) Translates to: LCIYGTLITVFQEKS*ARPQAHFWVDSKTV Trigger: TACTGTCTTGGAATCAACCCAGAAGTGGGCCTGCGGCCTAGCTCAGGACTTCTCCTGAAACACTGTAATCAGTGTACCATAGATGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 90 bp | AAGGAAAAACCACTAGTAAATGGGTATGTACAAATGGGCCTTTATTaGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCACT | + |
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Preference number: 1 (lower is better) Translates to: KEKPLVNGYVQMGLY*YSLRGRQAQSQGPT Trigger: AGTGGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGTACATACCCATTTACTAGTGGTTTTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGACCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCACGTCTGCATCTGCCCTaGCAGGACTGGCTAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: KDPLPLAPVLSRFSSPSPRLHLP*QDWLRH Trigger: GTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACG...TGGAGAGGGGGAGCTAAACCTGCTGAGGACAGGAGCCAGGGGAAGTGGGTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR-3UTR TCA 90 bp | ATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCGTTGGTGTAGGGGGATaGGCAGGGCTCTCAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: MGLYWYSLRGRQAQSQGPVGVGG*AGLSKV Trigger: CACCTTTGAGAGCCCTGCTCATCCCCCTACACCAAC...GGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCAGCAGGTTTAGCTCCCCCTCTCCAAAGTGGGGCTGGGTAGGAACTCCACCGCAGGCCCACTTCTaGGTTGATTCCAAGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: VLSRFSSPSPKWGWVGTPPQAHF*VDSKTV Trigger: TACTGTCTTGGAATCAACCCAGAAGTGGGCCTGCGG...TGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGGGAGCTAAACCTGCTGAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR-3UTR TCA 90 bp | GTACAAATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAATTTCAGGAGAAGTCCTaGGCTAGGCCGCAGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: VQMGLYWYSLRGRQAQSQFQEKS*ARPQAH Trigger: GTGGGCCTGCGGCCTAGCTCAGGACTTCTCCTGAAA...TTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CAA 90 bp | GAAGGAAAAACCACTAGTAAATGGGTATGTACAAATGGGCCTTTATaGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: EGKTTSKWVCTNGPL*VQSEGQAGTVSRTH Trigger: GTGGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGTACATACCCATTTACTAGTGGTTTTTCCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 72 bp | CATCTGCCCTGGCAGGACTGGCTAAGGCACAGTGGCTaGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGC | + |
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Preference number: 3 (lower is better) Translates to: HLPWQDWLRHSG*AVSRCVLGSRG Trigger: GCCCCGGGATCCCAGCACACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTCCTGCCAGGGCAGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 72 bp | TCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACAGTaGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCG | + |
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Preference number: 3 (lower is better) Translates to: SASALAGLAKAQ*LGCVTVCAGIP Trigger: CGGGATCCCAGCACACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 72 bp | CCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCAAAGTaGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: PVLSRFSSPSPK*GWVGTPDSGLC Trigger: GCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGGGAGCTAAACCTGCTGAGGACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 72 bp | CTCAGCAGGTTTAGCTCCCCCTCTCCAAAGTGGGGCTaGGTAGGAACTCCAGACTCAGGCCTGTGCATCTAT | + |
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Preference number: 3 (lower is better) Translates to: LSRFSSPSPKWG*VGTPDSGLCIY Trigger: ATAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGGGAGCTAAACCTGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR TCA 72 bp | TATGGTACACTGATTACAGTGTTTCAGGAGAAGTCCTaGGCTAGGCCGCAGGCCCACTTCTGGGTTGATTCC | + |
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Preference number: 3 (lower is better) Translates to: YGTLITVFQEKS*ARPQAHFWVDS Trigger: GGAATCAACCCAGAAGTGGGCCTGCGGCCTAGCTCAGGACTTCTCCTGAAACACTGTAATCAGTGTACCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR GCA 72 bp | AAGTGGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTaGATCTATGGTACACTGATTACAGTGTTTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: KWGWVGTPDSGL*IYGTLITVFQE Trigger: CTCCTGAAACACTGTAATCAGTGTACCATAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR TCA 72 bp | GAACTCCAGACTCAGGCCTGTGCATCTATGGTACACTaGTTACAGTGTTTCAGGAGAAGTCCTGAGCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: ELQTQACASMVH*LQCFRRSPELG Trigger: GCCTAGCTCAGGACTTCTCCTGAAACACTGTAATCAGTGTACCATAGATGCACAGGCCTGAGTCTGGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 72 bp | CTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTATaGTACACTGATTACAGTGTTTCAGGAGAAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: LGRNSRLRPVHL*YTDYSVSGEVL Trigger: CAGGACTTCTCCTGAAACACTGTAATCAGTGTACCATAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 72 bp | CCACTAGTAAATGGGTATGTACAAATGGGCCTTTATTaGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAA | + |
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Preference number: 3 (lower is better) Translates to: PLVNGYVQMGLY*YSLRGRQAQSQ Trigger: TTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGTACATACCCATTTACTAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| 3UTR CCA 72 bp | CCTCAGGCCTCCTCAGAAGGAAAAACCACTAGTAAATaGGTATGTACAAATGGGCCTTTATTGGTACAGTCT | + |
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Preference number: 3 (lower is better) Translates to: PQASSEGKTTSK*VCTNGPLLVQS Trigger: AGACTGTACCAATAAAGGCCCATTTGTACATACCCATTTACTAGTGGTTTTTCCTTCTGAGGAGGCCTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | CCTCGGGGGTGGCGTTCCCGTCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACGGTGTTTCCCACAGCTaGTGCCACAGGCCCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PRGWRSRLHLPWQDWLRHGVSHS*CHRPLP Trigger: AGGCAAGGGCCTGTGGCAGCAGCTGTGGGAAACACC...GTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACGGGAACGCCACCCCCGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | GACTGGCTAAGGCACAGTGGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGGCCCAGGAGTCCCTaGTGTTGCTGTTGGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DWLRHSGWAVSRCVLGSRGPRSP*CCCWRQ Trigger: CTGCCGCCAACAGCAACAGCAGGGACTCCTGGGCCC...CCGGGATCCCAGCACACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR TCA 90 bp | CCTCGGGGGTGGCGTTCCCGTCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACACCCAGTTCAGTGTCTaGGCTAGGCCATTGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PRGWRSRLHLPWQDWLRHTQFSV*ARPLLG Trigger: CCCCAGCAATGGCCTAGCTCAGACACTGAACTGGGT...GTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACGGGAACGCCACCCCCGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | GGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTACTGGCTCCTTGCCCTaGAGGAGGCGCAGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GWAVSRCVLGSRGSDFIITGSLP*RRRSTR Trigger: CCTGGTGCTGCGCCTCCTGCAGGGCAAGGAGCCAGT...AATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAGCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | GGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTCAGGGGCTGTGTGTATaGGGGCCAAGGGCTGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: GWAVSRCVLGSRGSDFIIQGLCV*GPRAAN Trigger: GTTCGCAGCCCTTGGCCCGCATACACACAGCCCCTG...AATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAGCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | GGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTGGATCACTGGCTCCTTaGCCTGCAGGAGGCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GWAVSRCVLGSRGSDFIIGSLAP*PAGGAA Trigger: TGCTGCGCCTCCTGCAGGGCAAGGAGCCAGTGATCC...AATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAGCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR TCA 90 bp | GTCCTCAGCAGGTTTAGCTCCCCCTCTCCAAAGTGGGGCTGGGTAGGAACTCCACAGACCGGCAGATGGTaGGCAAACCAGGCAGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: VLSRFSSPSPKWGWVGTPQTGRW*ANQAAG Trigger: ACCCGCTGCCTGGTTTGCTCACCATCTGCCGGTCTG...TGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGGGAGCTAAACCTGCTGAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR TCA 90 bp | GTCCTCAGCAGGTTTAGCTCCCCCTCTCCAAAGTGGGGCTGGGTAGGAACTCCACCAGGAGGGCAGTGGTaGGCACCAGGGTTAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VLSRFSSPSPKWGWVGTPPGGQW*APGLAG Trigger: ACCTGCTAACCCTGGTGCTCACCACTGCCCTCCTGG...TGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGGGAGCTAAACCTGCTGAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR CCA 90 bp | ATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCGCCCCCAGAGCAGGATaGGAGGCTCCAGGGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: MGLYWYSLRGRQAQSQGPAPRAG*EAPGET Trigger: TGTCTCCCCTGGAGCCTCCCATCCTGCTCTGGGGGC...GGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCCAAAGTGGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTACCCTGTAGGAAAAGCTaGTGTGGGACCCGGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLSKVGLGRNSRLRPVHLPCRKS*CGTREL Trigger: GAGCTCCCGGGTCCCACAGCAGCTTTTCCTACAGGG...TAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | CACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACGTGGCCTTCGAGCAGGAAGGATaGCCTCTGGGCCATAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: HGVCWDPGALTSSLGHVAFEQEG*PLGHRG Trigger: GCCTCTATGGCCCAGAGGGCATCCTTCCTGCTCGAA...GGCCACGTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | AAGGACCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCAATGCGGGCCAAGGGCTaGGAACCACATCTGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: KDPLPLAPVLSRFSSPSPMRAKG*EPHLPI Trigger: GATTGGCAGATGTGGTTCGCAGCCCTTGGCCCGCAT...TGGAGAGGGGGAGCTAAACCTGCTGAGGACAGGAGCCAGGGGAAGTGGGTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | ATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCTCGGATAGCCACCACTaGCCCGAAGAGCCCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: MGLYWYSLRGRQAQSQGPSDSHH*PEEPPE Trigger: CTCTGGGGGCTCTTCGGGGCAGTGGTGGCTATCCGA...GGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTCTCCCACAGCAGCGTTaGTGTTTCCCACAGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GWAVSRCVLGSRGSDFIILPQQR*CFPQLL Trigger: CAGCAGCTGTGGGAAACACCAACGCTGCTGTGGGAG...AATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAGCCCAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR CCA 90 bp | CCCCTCTCCAAAGTGGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTAACCAGGCAGCGGGTGTaGGCAGGCACTGAGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PLSKVGLGRNSRLRPVHLTRQRV*AGTESH Trigger: ATGAGACTCAGTGCCTGCCCACACCCGCTGCCTGGT...TAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | AAGGTGAGTAGCGAAGGATGTGGTTGGTGTAGGGGGATGAGCAGGGCTCTCAAAGCTGCCACAGGCCCTTaGCTTGGGGCCGCAGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KVSSEGCGWCRGMSRALKAATGP*LGAAVF Trigger: GAACACTGCGGCCCCAAGGCAAGGGCCTGTGGCAGC...TTTGAGAGCCCTGCTCATCCCCCTACACCAACCACATCCTTCGCTACTCACCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR CCA 90 bp | CACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACGTGGCCGTGGGCATCTTCTTGTaGCATCTGAGGCCAGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: HGVCWDPGALTSSLGHVAVGIFL*HLRPGS Trigger: TGAGCCTGGCCTCAGATGCCACAAGAAGATGCCCAC...GGCCACGTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR TCA 90 bp | ATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCCACCAGAGGCGAACATaGGTCGAAACAGCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: MGLYWYSLRGRQAQSQGPHQRRT*VETAAS Trigger: GCTGGCTGCTGTTTCGACTCATGTTCGCCTCTGGTG...GGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR TCA 90 bp | ACAAATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGGGCTCAGCAGACAGGTaGCGGTCATCCAGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TNGPLLVQSEGQAGTVSRGSADR*RSSRRA Trigger: TGCCCTCCTGGATGACCGTCACCTGTCTGCTGAGCC...CCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | TTACAGTGTTTCAGGAGAAGTCCTGAGCTAGGCCGCAGGCCCACTTCTGGGTTGGTTTCCCACAGCTGCTaGCACAGGCCCTTGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LQCFRRSPELGRRPTSGLVSHSC*HRPLPW Trigger: CCAAGGCAAGGGCCTGTGGCAGCAGCTGTGGGAAAC...CAACCCAGAAGTGGGCCTGCGGCCTAGCTCAGGACTTCTCCTGAAACACTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | AAGGACCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCACAAAGTAGTAGACAGTaGCGTAGGCCAGCAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: KDPLPLAPVLSRFSSPSPQSSRQ*RRPAAH Trigger: ATGGGCTGCTGGCCTACGGCACTGTCTACTACTTTG...TGGAGAGGGGGAGCTAAACCTGCTGAGGACAGGAGCCAGGGGAAGTGGGTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR CCA 90 bp | AGTCTCAAGGACCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCAAAGGCCGTAAGAGTTaGCCAGCTGTAGGTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SLKDPLPLAPVLSRFSSPKGRKS*PAVGAP Trigger: TGGAGCACCTACAGCTGGCCAACTCTTACGGCCTTT...GGGGGAGCTAAACCTGCTGAGGACAGGAGCCAGGGGAAGTGGGTCCTTGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR CCA 90 bp | GACTGGCTAAGGCACAGTGGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGCCCCAAGGATACAGATaGGAAGAATTCCTCTACCCA | + |
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Preference number: 4 (lower is better) Translates to: DWLRHSGWAVSRCVLGSRPQGYR*EEFLYP Trigger: TGGGTAGAGGAATTCTTCCCATCTGTATCCTTGGGG...CCGGGATCCCAGCACACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR TCA 90 bp | CCCCTCTCCAAAGTGGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTAAGCCACTGGGAGAACTaGTGGAAGGTGAAGGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: PLSKVGLGRNSRLRPVHLSHWEN*WKVKVV Trigger: AACCACCTTCACCTTCCATCAGTTCTCCCAGTGGCT...TAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR TCA 90 bp | CACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACGTGGCCAGTAAGGTACTAGGCTaGTCAGGAACAAGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: HGVCWDPGALTSSLGHVASKVLG*SGTRPL Trigger: CAGTGGCCTTGTTCCTGATCAGCCTAGTACCTTACT...GGCCACGTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS-3UTR GCA 90 bp | CTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACTTGGCCAGCTGTAGGTaGTCCACAGAACCGAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCHGVCWDPGALTSSLGHLASCR*STEPNR Trigger: CCTGTTCGGTTCTGTGGAGCACCTACAGCTGGCCAA...GTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CCA 90 bp | CTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCACTTCCAGGAAGGATGCCCTCTaGGCCATAGAGGCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LYWYSLRGRQAQSQGPTSRKDAL*AIEAWD Trigger: ATCCCAGGCCTCTATGGCCCAGAGGGCATCCTTCCT...GGAAGTGGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR TCA 90 bp | ACAAATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGAGCGGCTGGTCAACTTaGCCACACCAGAGGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: TNGPLLVQSEGQAGTVSRSGWST*PHQRRT Trigger: TGTTCGCCTCTGGTGTGGTCAAGTTGACCAGCCGCT...CCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGAACTGATGGAAGGTaGAGGTGGTTTTCGAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GWAVSRCVLGSRGSDFIIRTDGR*RWFSRG Trigger: TCCTCTCGAAAACCACCTTCACCTTCCATCAGTTCT...AATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAGCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR GCA 90 bp | AAGGTGAGTAGCGAAGGATGTGGTTGGTGTAGGGGGATGAGCAGGGCTCTCAAAGCTGCGAACCACATCTaGCAATCAAGGCGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSSEGCGWCRGMSRALKAANHI*QSRRGW Trigger: CCAGCCACGCCTTGATTGGCAGATGTGGTTCGCAGC...TTTGAGAGCCCTGCTCATCCCCCTACACCAACCACATCCTTCGCTACTCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACAGCAAAGAACAGGGGTaGCACTGCGATCTCGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCHGVCWDPGALTSSLGHSKEQG*HCDLDE Trigger: CTCATCGAGATCGCAGTGCCACCCCTGTTCTTTGCT...GTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR TCA 90 bp | GTACAAATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAATGCCACCACCGGCTCTaGTCTCCAGGCTTTGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VQMGLYWYSLRGRQAQSQCHHRL*SPGFEN Trigger: GTTCTCAAAGCCTGGAGATCAGAGCCGGTGGTGGCA...TTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR GCA 90 bp | TTACAGTGTTTCAGGAGAAGTCCTGAGCTAGGCCGCAGGCCCACTTCTGGGTTGAGGATGATGTGCTGTTaGCAGTCAACCTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQCFRRSPELGRRPTSGLRMMCC*QSTSRP Trigger: TGGCCTGGAGGTTGACTGGCAACAGCACATCATCCT...CAACCCAGAAGTGGGCCTGCGGCCTAGCTCAGGACTTCTCCTGAAACACTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CCA 90 bp | CCCCTCTCCAAAGTGGGGCTGGGTAGGAACTCCAGACTCAGGCCTGTGCATCTACATGAAAGGGGTAGTTaGCAACATGGCTCTGGACTA | + |
|
Preference number: 4 (lower is better) Translates to: PLSKVGLGRNSRLRPVHLHERGS*QHGSGL Trigger: TAGTCCAGAGCCATGTTGCCAACTACCCCTTTCATG...TAGATGCACAGGCCTGAGTCTGGAGTTCCTACCCAGCCCCACTTTGGAGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR TCA 90 bp | CTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCACTTCCTGGTTTTCGAGAGGATaGTGTGCTGTTGCCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LYWYSLRGRQAQSQGPTSWFSRG*CAVASQ Trigger: TTGACTGGCAACAGCACATCATCCTCTCGAAAACCA...GGAAGTGGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CCA 90 bp | ACAAATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGAGTAAATCCAGACCTTaGGCAGTATCCAGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNGPLLVQSEGQAGTVSRSKSRP*AVSSPS Trigger: ACTGGGGCTGGATACTGCCCAAGGTCTGGATTTACT...CCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR TCA 90 bp | ACAAATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGCTGATCTCCAGGCTTTaGGAACCAGTACTTATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TNGPLLVQSEGQAGTVSRLISRL*EPVLIA Trigger: CGCTATAAGTACTGGTTCTCAAAGCCTGGAGATCAG...CCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CCA 90 bp | CTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACCCTGCTAATCTACCCTaGAGAATCTTGTGTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCHGVCWDPGALTSSLGHPANLP*RILCLE Trigger: TTCCAAACACAAGATTCTCCAGGGTAGATTAGCAGG...GTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| 3UTR CAA 72 bp | ACCACTAGTAAATGGGTATGTACAAATGGGCCTTTATaGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTSKWVCTNGPL*VQSEGQAGTVS Trigger: TGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGTACATACCCATTTACTAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| 3UTR CAA 72 bp | CATAACCAGGCCTTTTTGTTTATTTTATGGAGAACATaGAGCTACAAGGAGGGAGCCCATTTAGCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HNQAFLFILWRT*SYKEGAHLAQS Trigger: TGACTGGGCTAAATGGGCTCCCTCCTTGTAGCTCAATGTTCTCCATAAAATAAACAAAAAGGCCTGGTTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 90 bp | GGATCACTGGCTCCTTGCCCTGCAGGAGGCGCAGCACCAGGCCGGTaGACCAGGGGCTGTGTGTATGCGGGCCAAGGGCTGCGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: GSLAPCPAGGAAPGR*TRGCVYAGQGLRTT Trigger: TGTGGTTCGCAGCCCTTGGCCCGCATACACACAGCCCCTGGTTCACCGGCCTGGTGCTGCGCCTCCTGCAGGGCAAGGAGCCAGTGATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | CCTCGGGGGTGGCGTTCCCGTCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACCAGCGGCTGGTCAACTaGACCACACCAGAGGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PRGWRSRLHLPWQDWLRHQRLVN*TTPEAN Trigger: GTTCGCCTCTGGTGTGGTCAAGTTGACCAGCCGCTG...GTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACGGGAACGCCACCCCCGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | TTGGGCAGTATCCAGCCCCAGTCTTGGTGCCTCCCACAGCAGCGTTaGTGTTTCCCACAGCTGCTGCCACAGGCCCTTGCCTTGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGSIQPQSWCLPQQR*CFPQLLPQALALGP Trigger: CGGCCCCAAGGCAAGGGCCTGTGGCAGCAGCTGTGGGAAACACCAACGCTGCTGTGGGAGGCACCAAGACTGGGGCTGGATACTGCCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | GCCGCCCGCCCACGCCAGTCATCCGACGGAAAAGGCCGTAAGAGTTaGCCAGCTGTAGGTGCTCCACAGAACCGAACAGGCGATGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AARPRQSSDGKGRKS*PAVGAPQNRTGDEP Trigger: GGGCTCATCGCCTGTTCGGTTCTGTGGAGCACCTACAGCTGGCCAACTCTTACGGCCTTTTCCGTCGGATGACTGGCGTGGGCGGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 90 bp | CCCAGTCTTGGTGCCTCCCACAGCAGCGTTGGTGTTTCCCACAGCTaGTGCCACAGGCCCTTGCCTTGGGGCCGCAGTGTTCTTCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLGASHSSVGVSHS*CHRPLPWGRSVLRA Trigger: TGCTCGAAGAACACTGCGGCCCCAAGGCAAGGGCCTGTGGCAGCAGCTGTGGGAAACACCAACGCTGCTGTGGGAGGCACCAAGACTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 90 bp | CACCAGGCCGGTGAACCAGGGGCTGTGTGTATGCGGGCCAAGGGCTaGGAACCACATCTGCCAATCAAGGCGTGGCTGGTGAGGAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQAGEPGAVCMRAKG*EPHLPIKAWLVRSQ Trigger: CTGACTCCTCACCAGCCACGCCTTGATTGGCAGATGTGGTTCGCAGCCCTTGGCCCGCATACACACAGCCCCTGGTTCACCGGCCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 90 bp | CGCCGAGGGGCCCAGGAGTCCCTGCTGTTGCTGTTGGCGGCAGCCTaGTCAGAGGCGGCTCTGGAATCCTTCTTGGAGGTTTGCTTACGT | + |
|
Preference number: 5 (lower is better) Translates to: RRGAQESLLLLLAAA*SEAALESFLEVCLR Trigger: ACGTAAGCAAACCTCCAAGAAGGATTCCAGAGCCGCCTCTGAGCAGGCTGCCGCCAACAGCAACAGCAGGGACTCCTGGGCCCCTCGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | AGCAGCGTTGGTGTTTCCCACAGCTGCTGCCACAGGCCCTTGCCTTaGGGCCGCAGTGTTCTTCGAGCAGGAAGGATGCCCTCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVGVSHSCCHRPLP*GRSVLRAGRMPSGP Trigger: TGGCCCAGAGGGCATCCTTCCTGCTCGAAGAACACTGCGGCCCCAAGGCAAGGGCCTGTGGCAGCAGCTGTGGGAAACACCAACGCTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | CACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACGTGGCCTGCTGCCACAGGCCCTaGCCTTGGGGCCGCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HGVCWDPGALTSSLGHVACCHRP*PWGRSV Trigger: AACACTGCGGCCCCAAGGCAAGGGCCTGTGGCAGCA...GGCCACGTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | CACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACGTGGCCCAGGAGTCCCTGCTGTaGCTGTTGGCGGCAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HGVCWDPGALTSSLGHVAQESLL*LLAAAC Trigger: GCAGGCTGCCGCCAACAGCAACAGCAGGGACTCCTG...GGCCACGTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 90 bp | CTCTACCCACTGGCGGTGCCACCACCGGCTCTGATCTCCAGGCTTTaGGAACCAGTACTTATAGCGCTGGGCCCGCAGGTAGGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LYPLAVPPPALISRL*EPVLIALGPQVGGW Trigger: CCACCCACCTACCTGCGGGCCCAGCGCTATAAGTACTGGTTCTCAAAGCCTGGAGATCAGAGCCGGTGGTGGCACCGCCAGTGGGTAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | CTTGCCTTGGGGCCGCAGTGTTCTTCGAGCAGGAAGGATGCCCTCTaGGCCATAGAGGCCTGGGATCTGGGTGTAGAGGGACGCAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LALGPQCSSSRKDAL*AIEAWDLGVEGRKG Trigger: GCCTTTGCGTCCCTCTACACCCAGATCCCAGGCCTCTATGGCCCAGAGGGCATCCTTCCTGCTCGAAGAACACTGCGGCCCCAAGGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACCGGATCACTGGCTCCTaGCCCTGCAGGAGGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCHGVCWDPGALTSSLGHRITGS*PCRRRS Trigger: GCTGCGCCTCCTGCAGGGCAAGGAGCCAGTGATCCG...GTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | GACTGGCTAAGGCACAGTGGCTGGGCTGTGTCACGGTGTGTGCTGGGATCCCGGGCAGGGTTTCCAGTGTaGGGTCCCCCAAGGATACAG | + |
|
Preference number: 5 (lower is better) Translates to: DWLRHSGWAVSRCVLGSRAGFPV*GPPRIQ Trigger: CTGTATCCTTGGGGGACCCAACACTGGAAACCCTGC...CCGGGATCCCAGCACACACCGTGACACAGCCCAGCCACTGTGCCTTAGCCAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 90 bp | GGGCCAAGGGCTGCGAACCACATCTGCCAATCAAGGCGTGGCTGGTaGGGAGTCAGGAAAGGGGGTGGTCGGCTCACATTCCCAGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPRAANHICQSRRGW*GVRKGGGRLTFPGL Trigger: CAAACCTGGGAATGTGAGCCGACCACCCCCTTTCCTGACTCCTCACCAGCCACGCCTTGATTGGCAGATGTGGTTCGCAGCCCTTGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | GCTGGGCCCGCAGGTAGGTGGGTGGCCGTTCATGAAAGGGGTAGTTaGCAACATGGCTCTGGACTAGTCGGATCACTGGCTCCTTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGPAGRWVAVHERGS*QHGSGLVGSLAPCP Trigger: AGGGCAAGGAGCCAGTGATCCGACTAGTCCAGAGCCATGTTGCCAACTACCCCTTTCATGAACGGCCACCCACCTACCTGCGGGCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | AAGGACCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCAGAGGTGGGCATCTTCTaGTGGCATCTGAGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDPLPLAPVLSRFSSPSPEVGIF*WHLRPG Trigger: GCCTGGCCTCAGATGCCACAAGAAGATGCCCACCTC...TGGAGAGGGGGAGCTAAACCTGCTGAGGACAGGAGCCAGGGGAAGTGGGTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | CACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACGTGGCCGAGGATGATGTGCTGTaGCCAGTCAACCTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HGVCWDPGALTSSLGHVAEDDVL*PVNLQA Trigger: GGCCTGGAGGTTGACTGGCAACAGCACATCATCCTC...GGCCACGTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 90 bp | GGTGTCTCAGAGAGTTCAGGAGCAGGGCGCCCAGGGCTAGCACGGTaGCCAATAAGGTCAGTAAATCCAGACCTTGGGCAGTATCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSESSGAGRPGLAR*PIRSVNPDLGQYPA Trigger: GGCTGGATACTGCCCAAGGTCTGGATTTACTGACCTTATTGGGCACCGTGCTAGCCCTGGGCGCCCTGCTCCTGAACTCTCTGAGACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | CCCAGGGCTAGCACGGTGCCCAATAAGGTCAGTAAATCCAGACCTTaGGCAGTATCCAGCCCCAGTCTTGGTGCCTCCCACAGCAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PRASTVPNKVSKSRP*AVSSPSLGASHSSV Trigger: AACGCTGCTGTGGGAGGCACCAAGACTGGGGCTGGATACTGCCCAAGGTCTGGATTTACTGACCTTATTGGGCACCGTGCTAGCCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | GGGCTGCGGGCCCGGGGTGGACTCTTATCCTTTAGTCCAAACTGTTaGAGCAGGGTTTCCAGTGTTGGGTCCCCCAAGGATACAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GLRARGGLLSFSPNC*SRVSSVGSPKDTDG Trigger: CCCATCTGTATCCTTGGGGGACCCAACACTGGAAACCCTGCTCCAACAGTTTGGACTAAAGGATAAGAGTCCACCCCGGGCCCGCAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | ACAGCTGTGTCCGCACCCAGTTCAGTGTCTGAGCTAGGCCATTGCTaGGGCTGCGGGCCCGGGGTGGACTCTTATCCTTTAGTCCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: TAVSAPSSVSELGHC*GCGPGVDSYPLVQT Trigger: AGTTTGGACTAAAGGATAAGAGTCCACCCCGGGCCCGCAGCCCCAGCAATGGCCTAGCTCAGACACTGAACTGGGTGCGGACACAGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | ATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCGCTACCACGCTGAGCTaGTGTAGCCAGACCGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MGLYWYSLRGRQAQSQGPATTLS*CSQTGR Trigger: TCTGCCGGTCTGGCTACACAAGCTCAGCGTGGTAGC...GGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | AAGGACCCACTTCCCCTGGCTCCTGTCCTCAGCAGGTTTAGCTCCCCCTCTCCATCCCTAGCCACACAGTaGGCAGGGTTACCGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KDPLPLAPVLSRFSSPSPSLATQ*AGLPSS Trigger: TGAAGACGGTAACCCTGCCAACTGTGTGGCTAGGGA...TGGAGAGGGGGAGCTAAACCTGCTGAGGACAGGAGCCAGGGGAAGTGGGTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 90 bp | TGCCGTGCCCAGGACGGAGAGCTGGATACCCGCAGAGAACTTCCGTaGCCATCCTTGTACCTGGATCCACCTCCAGAGGACAACAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: CRAQDGELDTRRELP*PSLYLDPPPEDNKQ Trigger: TTGCTTGTTGTCCTCTGGAGGTGGATCCAGGTACAAGGATGGTCACGGAAGTTCTCTGCGGGTATCCAGCTCTCCGTCCTGGGCACGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | CTGATCAGGAACAAGGCCACTGTTGCCGTGCCCAGGACGGAGAGCTaGATACCCGCAGAGAACTTCCGTGACCATCCTTGTACCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LIRNKATVAVPRTES*IPAENFRDHPCTWI Trigger: GATCCAGGTACAAGGATGGTCACGGAAGTTCTCTGCGGGTATCCAGCTCTCCGTCCTGGGCACGGCAACAGTGGCCTTGTTCCTGATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | CTGTGTCACGGTGTGTGCTGGGATCCCGGGGCTCTGACTTCATCATTAGGACACTGGAGAATCTTGTGTTaGGAAGGCCCCCTCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LCHGVCWDPGALTSSLGHWRILC*EGPLSG Trigger: CCCGCTGAGGGGGCCTTCCAAACACAAGATTCTCCA...GTGTCCTAATGATGAAGTCAGAGCCCCGGGATCCCAGCACACACCGTGACACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | CCTCGGGGGTGGCGTTCCCGTCTGCATCTGCCCTGGCAGGACTGGCTAAGGCACATCCTTCTTGGAGGTTaGCTTACGTTTTTCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRGWRSRLHLPWQDWLRHILLGG*LTFFLS Trigger: AGAGAGGAAAAACGTAAGCAAACCTCCAAGAAGGAT...GTGCCTTAGCCAGTCCTGCCAGGGCAGATGCAGACGGGAACGCCACCCCCGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | CAGGCTTTGAGAACCAGTACTTATAGCGCTGGGCCCGCAGGTAGGTaGGTGGCCGTTCATGAAAGGGGTAGTTGGCAACATGGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QALRTSTYSAGPAGR*VAVHERGSWQHGSG Trigger: TCCAGAGCCATGTTGCCAACTACCCCTTTCATGAACGGCCACCCACCTACCTGCGGGCCCAGCGCTATAAGTACTGGTTCTCAAAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | GTACAAATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGAACAAGGCCACTGTaGCCGTGCCCAGGACGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VQMGLYWYSLRGRQAQSQGTRPL*PCPGRR Trigger: TCTCCGTCCTGGGCACGGCAACAGTGGCCTTGTTCC...TTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCATTTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 90 bp | GCGGCAGCCTGCTCAGAGGCGGCTCTGGAATCCTTCTTGGAGGTTTaGTTACGTTTTTCCTCTCTAGTCTGTTTTGAGGACTGGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AAACSEAALESFLEV*LRFSSLVCFEDWSG Trigger: CCCGCTCCAGTCCTCAAAACAGACTAGAGAGGAAAAACGTAAGCAAACCTCCAAGAAGGATTCCAGAGCCGCCTCTGAGCAGGCTGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS-3UTR CAA 90 bp | TTACAGTGTTTCAGGAGAAGTCCTGAGCTAGGCCGCAGGCCCACTTCTGGGTTGCTACCCTGGAGAATCTaGTGTTTGGAAGGCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQCFRRSPELGRRPTSGLLPWRI*CLEGPL Trigger: GAGGGGGCCTTCCAAACACAAGATTCTCCAGGGTAG...CAACCCAGAAGTGGGCCTGCGGCCTAGCTCAGGACTTCTCCTGAAACACTGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 90 bp | GGAATCCCACTGGAAATAAAGGAACACTTGGCCCACCTGGTAGGCTaGTCGGTATGCAACCCAGAGCAGCAGGTAGACGAAGGGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GIPLEIKEHLAHLVG*SVCNPEQQVDEGVS Trigger: AGACACCCCTTCGTCTACCTGCTGCTCTGGGTTGCATACCGATCAGCCTACCAGGTGGGCCAAGTGTTCCTTTATTTCCAGTGGGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 90 bp | AGCCACACAGTTGGCAGGGTTACCGTCTTCAGCCACTGGGAGAACTaGTGGAAGGTGAAGGTGGTTTTCGAGAGGATGATGTGCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHTVGRVTVFSHWEN*WKVKVVFERMMCCC Trigger: GCAACAGCACATCATCCTCTCGAAAACCACCTTCACCTTCCATCAGTTCTCCCAGTGGCTGAAGACGGTAACCCTGCCAACTGTGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | AGTCGAAACAGCAGCCAGCGCACGAGCCAGAATGGGAGGTCTTCATaGGGTAAGGCTCCTGCTAATCTACCCTGGAGAATCTTGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRNSSQRTSQNGRSS*GKAPANLPWRILCL Trigger: CAAACACAAGATTCTCCAGGGTAGATTAGCAGGAGCCTTACCCCATGAAGACCTCCCATTCTGGCTCGTGCGCTGGCTGCTGTTTCGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | CATCTGCCAATCAAGGCGTGGCTGGTGAGGAGTCAGGAAAGGGGGTaGTCGGCTCACATTCCCAGGTTTGTACATGAATTCGATCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLPIKAWLVRSQERG*SAHIPRFVHEFDLC Trigger: ACAGAGATCGAATTCATGTACAAACCTGGGAATGTGAGCCGACCACCCCCTTTCCTGACTCCTCACCAGCCACGCCTTGATTGGCAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 90 bp | TTGCAGATGTTCCCATCCCAGGCAGGGCTTGCTCTGTCTACCAGATaGTCTCTCTCTCTCACGTTGGAAATTGTTGACCCCCAACACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQMFPSQAGLALSTR*SLSLTLEIVDPQHQ Trigger: CTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAGCCCTGCCTGGGATGGGAACATCTGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGCCTTTATTGGTACAGTCTGAGGGGCAGGCAGGCACAGTCTCAAGGACCCTCTGATCTCCAGGCTTaGAGAACCAGTACTTATAGC | + |
|
Preference number: 5 (lower is better) Translates to: MGLYWYSLRGRQAQSQGPSDLQA*RTSTYS Trigger: GCTATAAGTACTGGTTCTCAAAGCCTGGAGATCAGA...GGGTCCTTGAGACTGTGCCTGCCTGCCCCTCAGACTGTACCAATAAAGGCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 90 bp | TGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGTTGGAAATTGTTaGCCCCCAACACCAGGTTCAGAAGACCTGATTCTGGGTCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSVYQMVSLSHVGNC*PPTPGSEDLILGQH Trigger: GTGCTGACCCAGAATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS CCA 90 bp | AGGCAGGGCTTGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGTTaGAAATTGTTGACCCCCAACACCAGGTTCAGAAGACCTGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: RQGLLCLPDGLSLSR*KLLTPNTRFRRPDS Trigger: AGAATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAGCCCTGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS TCA 72 bp | GCTCCTTGCCCTGCAGGAGGCGCAGCACCAGGCCGGTaGACCAGGGGCTGTGTGTATGCGGGCCAAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APCPAGGAAPGR*TRGCVYAGQGL Trigger: CAGCCCTTGGCCCGCATACACACAGCCCCTGGTTCACCGGCCTGGTGCTGCGCCTCCTGCAGGGCAAGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 72 bp | TGGCTCTGGACTAGTCGGATCACTGGCTCCTTGCCCTaGAGGAGGCGCAGCACCAGGCCGGTGAACCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WLWTSRITGSLP*RRRSTRPVNQG Trigger: CCCCTGGTTCACCGGCCTGGTGCTGCGCCTCCTGCAGGGCAAGGAGCCAGTGATCCGACTAGTCCAGAGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 72 bp | GCCAGCTGTAGGTGCTCCACAGAACCGAACAGGCGATaGGCCCCAGTCCAGAGACGCCCGTGGGTCCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ASCRCSTEPNRR*APVQRRPWVPG Trigger: ACCTGGGACCCACGGGCGTCTCTGGACTGGGGCTCATCGCCTGTTCGGTTCTGTGGAGCACCTACAGCTGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 72 bp | GTGTCCGCACCCAGTTCAGTGTCTGAGCTAGGCCATTaGTGGGGCTGCGGGCCCGGGGTGGACTCTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSAPSSVSELGH*WGCGPGVDSYP Trigger: AGGATAAGAGTCCACCCCGGGCCCGCAGCCCCAGCAATGGCCTAGCTCAGACACTGAACTGGGTGCGGACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 72 bp | TGCCTTGGGGCCGCAGTGTTCTTCGAGCAGGAAGGATaGCCTCTGGGCCATAGAGGCCTGGGATCTGGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CLGAAVFFEQEG*PLGHRGLGSGC Trigger: ACACCCAGATCCCAGGCCTCTATGGCCCAGAGGGCATCCTTCCTGCTCGAAGAACACTGCGGCCCCAAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 72 bp | GGTGAACCAGGGGCTGTGTGTATGCGGGCCAAGGGCTaGGAACCACATCTGCCAATCAAGGCGTGGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GEPGAVCMRAKG*EPHLPIKAWLV Trigger: CACCAGCCACGCCTTGATTGGCAGATGTGGTTCGCAGCCCTTGGCCCGCATACACACAGCCCCTGGTTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 72 bp | GCCCAGGAGTCCCTGCTGTTGCTGTTGGCGGCAGCCTaGTCAGAGGCGGCTCTGGAATCCTTCTTGGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AQESLLLLLAAA*SEAALESFLEV Trigger: AACCTCCAAGAAGGATTCCAGAGCCGCCTCTGAGCAGGCTGCCGCCAACAGCAACAGCAGGGACTCCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 90 bp | GTCAGAGCAGTGAGTCCCCACCACGTAGGGCAGCGGCTGGTCAACTaGACCACACCAGAGGCGAACATGAGTCGAAACAGCAGCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VRAVSPHHVGQRLVN*TTPEANMSRNSSQR Trigger: GCGCTGGCTGCTGTTTCGACTCATGTTCGCCTCTGGTGTGGTCAAGTTGACCAGCCGCTGCCCTACGTGGTGGGGACTCACTGCTCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 72 bp | CTGGCGGTGCCACCACCGGCTCTGATCTCCAGGCTTTaGGAACCAGTACTTATAGCGCTGGGCCCGCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LAVPPPALISRL*EPVLIALGPQV Trigger: TACCTGCGGGCCCAGCGCTATAAGTACTGGTTCTCAAAGCCTGGAGATCAGAGCCGGTGGTGGCACCGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 72 bp | ACTCCCAGGCCAGGGAGGCTGTCCCTAGCCACACAGTaGGCAGGGTTACCGTCTTCAGCCACTGGGAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: TPRPGRLSLATQ*AGLPSSATGRT Trigger: AGTTCTCCCAGTGGCTGAAGACGGTAACCCTGCCAACTGTGTGGCTAGGGACAGCCTCCCTGGCCTGGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 72 bp | ACTGGCGGTGCCACCACCGGCTCTGATCTCCAGGCTTaGAGAACCAGTACTTATAGCGCTGGGCCCGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGGATTGSDLQA*RTSTYSAGPAG Trigger: ACCTGCGGGCCCAGCGCTATAAGTACTGGTTCTCAAAGCCTGGAGATCAGAGCCGGTGGTGGCACCGCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS GCA 72 bp | GAGAGTTCAGGAGCAGGGCGCCCAGGGCTAGCACGGTaGCCAATAAGGTCAGTAAATCCAGACCTTGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ESSGAGRPGLAR*PIRSVNPDLGQ Trigger: CTGCCCAAGGTCTGGATTTACTGACCTTATTGGGCACCGTGCTAGCCCTGGGCGCCCTGCTCCTGAACTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | AGACCGGCAGATGGTGAGCAAACCAGGCAGCGGGTGTaGGCAGGCACTGAGTCTCATAGTGGTAGGTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RPADGEQTRQRV*AGTESHSGRSE Trigger: CTCTGACCTACCACTATGAGACTCAGTGCCTGCCCACACCCGCTGCCTGGTTTGCTCACCATCTGCCGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 90 bp | CAACAAGCAACTCCCAGGCCAGGGAGGCTGTCCCTAGCCACACAGTaGGCAGGGTTACCGTCTTCAGCCACTGGGAGAACTGATGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QQATPRPGRLSLATQ*AGLPSSATGRTDGR Trigger: CCTTCCATCAGTTCTCCCAGTGGCTGAAGACGGTAACCCTGCCAACTGTGTGGCTAGGGACAGCCTCCCTGGCCTGGGAGTTGCTTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 72 bp | CAGGACGGAGAGCTGGATACCCGCAGAGAACTTCCGTaGCCATCCTTGTACCTGGATCCACCTCCAGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: QDGELDTRRELP*PSLYLDPPPED Trigger: GTCCTCTGGAGGTGGATCCAGGTACAAGGATGGTCACGGAAGTTCTCTGCGGGTATCCAGCTCTCCGTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | AACAAGGCCACTGTTGCCGTGCCCAGGACGGAGAGCTaGATACCCGCAGAGAACTTCCGTGACCATCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: NKATVAVPRTES*IPAENFRDHPC Trigger: ACAAGGATGGTCACGGAAGTTCTCTGCGGGTATCCAGCTCTCCGTCCTGGGCACGGCAACAGTGGCCTTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | CCAGTACTTATAGCGCTGGGCCCGCAGGTAGGTGGGTaGCCGTTCATGAAAGGGGTAGTTGGCAACATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVLIALGPQVGG*PFMKGVVGNMA Trigger: AGCCATGTTGCCAACTACCCCTTTCATGAACGGCCACCCACCTACCTGCGGGCCCAGCGCTATAAGTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 90 bp | ATAAGGTCAGTAAATCCAGACCTTGGGCAGTATCCAGCCCCAGTCTaGGTGCCTCCCACAGCAGCGTTGGTGTTTCCCACAGCTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: IRSVNPDLGQYPAPV*VPPTAALVFPTAAA Trigger: GGCAGCAGCTGTGGGAAACACCAACGCTGCTGTGGGAGGCACCAAGACTGGGGCTGGATACTGCCCAAGGTCTGGATTTACTGACCTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 72 bp | GGGTCCCAGGTTCCACATAGGAGTAAGGTACTAGGCTaGTCAGGAACAAGGCCACTGTTGCCGTGCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSQVPHRSKVLG*SGTRPLLPCPG Trigger: TCCTGGGCACGGCAACAGTGGCCTTGTTCCTGATCAGCCTAGTACCTTACTCCTATGTGGAACCTGGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | AGCACGGTGCCCAATAAGGTCAGTAAATCCAGACCTTaGGCAGTATCCAGCCCCAGTCTTGGTGCCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: STVPNKVSKSRP*AVSSPSLGASH Trigger: GTGGGAGGCACCAAGACTGGGGCTGGATACTGCCCAAGGTCTGGATTTACTGACCTTATTGGGCACCGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | AGCAGCCAGCGCACGAGCCAGAATGGGAGGTCTTCATaGGGTAAGGCTCCTGCTAATCTACCCTGGAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: SSQRTSQNGRSS*GKAPANLPWRI Trigger: GATTCTCCAGGGTAGATTAGCAGGAGCCTTACCCCATGAAGACCTCCCATTCTGGCTCGTGCGCTGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | GCAGGTAGGTGGGTGGCCGTTCATGAAAGGGGTAGTTaGCAACATGGCTCTGGACTAGTCGGATCACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGRWVAVHERGS*QHGSGLVGSLA Trigger: AGCCAGTGATCCGACTAGTCCAGAGCCATGTTGCCAACTACCCCTTTCATGAACGGCCACCCACCTACCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | CAGGGTTTCCAGTGTTGGGTCCCCCAAGGATACAGATaGGAAGAATTCCTCTACCCACTGGCGGTGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QGFQCWVPQGYR*EEFLYPLAVPP Trigger: TGGTGGCACCGCCAGTGGGTAGAGGAATTCTTCCCATCTGTATCCTTGGGGGACCCAACACTGGAAACCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | AGGTCTTCATGGGGTAAGGCTCCTGCTAATCTACCCTaGAGAATCTTGTGTTTGGAAGGCCCCCTCAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSWGKAPANLP*RILCLEGPLSG Trigger: CCCGCTGAGGGGGCCTTCCAAACACAAGATTCTCCAGGGTAGATTAGCAGGAGCCTTACCCCATGAAGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | AGAACCAGTACTTATAGCGCTGGGCCCGCAGGTAGGTaGGTGGCCGTTCATGAAAGGGGTAGTTGGCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: RTSTYSAGPAGR*VAVHERGSWQH Trigger: ATGTTGCCAACTACCCCTTTCATGAACGGCCACCCACCTACCTGCGGGCCCAGCGCTATAAGTACTGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 72 bp | GGTTGTGCTTGCAGATGTTCCCATCCCAGGCAGGGCTaGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: GCACRCSHPRQG*LCLPDGLSLSR Trigger: ACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAGCCCTGCCTGGGATGGGAACATCTGCAAGCACAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS GCA 72 bp | GTTGTGCTTGCAGATGTTCCCATCCCAGGCAGGGCTTaGTCTGTCTACCAGATGGTCTCTCTCTCTCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: VVLADVPIPGRA*SVYQMVSLSHV Trigger: AACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAGCCCTGCCTGGGATGGGAACATCTGCAAGCACAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS CCA 72 bp | TGTTGCTGTTGGCGGCAGCCTGCTCAGAGGCGGCTCTaGAATCCTTCTTGGAGGTTTGCTTACGTTTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CCCWRQPAQRRL*NPSWRFAYVFP Trigger: AGGAAAAACGTAAGCAAACCTCCAAGAAGGATTCCAGAGCCGCCTCTGAGCAGGCTGCCGCCAACAGCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CCA 72 bp | TTCCCATCCCAGGCAGGGCTTGCTCTGTCTACCAGATaGTCTCTCTCTCTCACGTTGGAAATTGTTGACCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPSQAGLALSTR*SLSLTLEIVDP Trigger: GGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAGCCCTGCCTGGGATGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS CAA 72 bp | AAGGCTCCTGCTAATCTACCCTGGAGAATCTTGTGTTaGGAAGGCCCCCTCAGCGGGGCTACCAGTATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KAPANLPWRILC*EGPLSGATSIA Trigger: AGCTATACTGGTAGCCCCGCTGAGGGGGCCTTCCAAACACAAGATTCTCCAGGGTAGATTAGCAGGAGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 72 bp | GCGGCAGCCTGCTCAGAGGCGGCTCTGGAATCCTTCTaGGAGGTTTGCTTACGTTTTTCCTCTCTAGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AAACSEAALESF*EVCLRFSSLVC Trigger: ACAGACTAGAGAGGAAAAACGTAAGCAAACCTCCAAGAAGGATTCCAGAGCCGCCTCTGAGCAGGCTGCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 90 bp | CCAACTCCAGGTTGTGCTTGCAGATGTTCCCATCCCAGGCAGGGCTaGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGTTGGAAATTG | + |
|
Preference number: 6 (lower is better) Translates to: PTPGCACRCSHPRQG*LCLPDGLSLSRWKL Trigger: CAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAGCCCTGCCTGGGATGGGAACATCTGCAAGCACAACCTGGAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS TCA 72 bp | CTGGAAATAAAGGAACACTTGGCCCACCTGGTAGGCTaGTCGGTATGCAACCCAGAGCAGCAGGTAGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: LEIKEHLAHLVG*SVCNPEQQVDE Trigger: TTCGTCTACCTGCTGCTCTGGGTTGCATACCGATCAGCCTACCAGGTGGGCCAAGTGTTCCTTTATTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS TCA 72 bp | GTTGGCAGGGTTACCGTCTTCAGCCACTGGGAGAACTaGTGGAAGGTGAAGGTGGTTTTCGAGAGGATGATG | + |
|
Preference number: 6 (lower is better) Translates to: VGRVTVFSHWEN*WKVKVVFERMM Trigger: CATCATCCTCTCGAAAACCACCTTCACCTTCCATCAGTTCTCCCAGTGGCTGAAGACGGTAACCCTGCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 72 bp | GTCAGGAAAGGGGGTGGTCGGCTCACATTCCCAGGTTaGTACATGAATTCGATCTCTGTCCAATGCTGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VRKGGGRLTFPG*YMNSISVQCCP Trigger: CGGACAGCATTGGACAGAGATCGAATTCATGTACAAACCTGGGAATGTGAGCCGACCACCCCCTTTCCTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 90 bp | GAACTGATGGAAGGTGAAGGTGGTTTTCGAGAGGATGATGTGCTGTaGCCAGTCAACCTCCAGGCCAAAGTAGTAGACAGTGCCGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ELMEGEGGFREDDVL*PVNLQAKVVDSAVG Trigger: GCCTACGGCACTGTCTACTACTTTGGCCTGGAGGTTGACTGGCAACAGCACATCATCCTCTCGAAAACCACCTTCACCTTCCATCAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 90 bp | TTGCTGTTGGCGGCAGCCTGCTCAGAGGCGGCTCTGGAATCCTTCTaGGAGGTTTGCTTACGTTTTTCCTCTCTAGTCTGTTTTGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLAAACSEAALESF*EVCLRFSSLVCFED Trigger: GTCCTCAAAACAGACTAGAGAGGAAAAACGTAAGCAAACCTCCAAGAAGGATTCCAGAGCCGCCTCTGAGCAGGCTGCCGCCAACAGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
||
| CDS CAA 90 bp | GGCTTGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGTTGGAAATaGTTGACCCCCAACACCAGGTTCAGAAGACCTGATTCTGGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GLLCLPDGLSLSRWK*LTPNTRFRRPDSGS Trigger: TGACCCAGAATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS TCA 72 bp | GAAATTGTTGACCCCCAACACCAGGTTCAGAAGACCTaGTTCTGGGTCAGCACCTTCTGGGATCTGGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: EIVDPQHQVQKT*FWVSTFWDLGV Trigger: TACACCCAGATCCCAGAAGGTGCTGACCCAGAATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS CAA 90 bp | TTGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGTTGGAAATTGTaGACCCCCAACACCAGGTTCAGAAGACCTGATTCTGGGTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLCLPDGLSLSRWKL*TPNTRFRRPDSGSA Trigger: TGCTGACCCAGAATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
||
| CDS CAA 72 bp | GAAGGTGAAGGTGGTTTTCGAGAGGATGATGTGCTGTaGCCAGTCAACCTCCAGGCCAAAGTAGTAGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: EGEGGFREDDVL*PVNLQAKVVDS Trigger: ACTGTCTACTACTTTGGCCTGGAGGTTGACTGGCAACAGCACATCATCCTCTCGAAAACCACCTTCACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS CAA 72 bp | CTTGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGTaGGAAATTGTTGACCCCCAACACCAGGTTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LALSTRWSLSLT*EIVDPQHQVQK Trigger: CTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
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| CDS TCA 72 bp | TACCAGATGGTCTCTCTCTCTCACGTTGGAAATTGTTaGCCCCCAACACCAGGTTCAGAAGACCTGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: YQMVSLSHVGNC*PPTPGSEDLIL Trigger: CAGAATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
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| CDS GCA 72 bp | TGCTCAGAGGCGGCTCTGGAATCCTTCTTGGAGGTTTaGTTACGTTTTTCCTCTCTAGTCTGTTTTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: CSEAALESFLEV*LRFSSLVCFED Trigger: GTCCTCAAAACAGACTAGAGAGGAAAAACGTAAGCAAACCTCCAAGAAGGATTCCAGAGCCGCCTCTGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023283.6 |
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| CDS CCA 72 bp | TTGCTCTGTCTACCAGATGGTCTCTCTCTCTCACGTTaGAAATTGTTGACCCCCAACACCAGGTTCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LLCLPDGLSLSR*KLLTPNTRFRR Trigger: TCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACAGAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
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| CDS CAA 72 bp | CTACCAGATGGTCTCTCTCTCTCACGTTGGAAATTGTaGACCCCCAACACCAGGTTCAGAAGACCTGATTCT | + |
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Preference number: 6 (lower is better) Translates to: LPDGLSLSRWKL*TPNTRFRRPDS Trigger: AGAATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
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| CDS CAA 72 bp | TGTCTACCAGATGGTCTCTCTCTCTCACGTTGGAAATaGTTGACCCCCAACACCAGGTTCAGAAGACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CLPDGLSLSRWK*LTPNTRFRRPD Trigger: ATCAGGTCTTCTGAACCTGGTGTTGGGGGTCAACAATTTCCAACGTGAGAGAGAGAGACCATCTGGTAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000229111.2 |
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