Pregenerated sensors for LMF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002279Ensembl transcript IDs: ENSMUST00000063344.15, ENSMUST00000116641.9, ENSMUST00000137201.8, ENSMUST00000141606.3
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCTGCCACCCTCGCAGCTGCTCACGGCCCCTCAGCGCCCCTCCTaGCAGCTGTGGGCAGCTCCAGGTGCAGCTGTCCTGAGGCTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: GLPPSQLLTAPQRPS*QLWAAPGAAVLRLL Trigger: GAGAAGCCTCAGGACAGCTGCACCTGGAGCTGCCCACAGCTGTCAGGAGGGGCGCTGAGGGGCCGTGAGCAGCTGCGAGGGTGGCAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR GCA 90 bp | GGAGCACTTGGCTGCATCCCTTGCCTGGGCTGCCACCCTCGCAGCTaGTCACGGCCCCTCAGCGCCCCTCCTGACAGCTGTGGGCAGCTC | + |
|
Preference number: 1 (lower is better) Translates to: GALGCIPCLGCHPRS*SRPLSAPPDSCGQL Trigger: GAGCTGCCCACAGCTGTCAGGAGGGGCGCTGAGGGGCCGTGAGCAGCTGCGAGGGTGGCAGCCCAGGCAAGGGATGCAGCCAAGTGCTCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR CCA 90 bp | TGCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCATCCCTTGCCTaGGCTGCCACCCTCGCAGCTGCTCACGGCCCCTCAGCGCCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: CHSRRHEEHLAASLA*AATLAAAHGPSAPL Trigger: GAGGGGCGCTGAGGGGCCGTGAGCAGCTGCGAGGGTGGCAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR CCA 90 bp | GGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTTaGCTGCATCCCTTGCCTGGGCTGCCACCCTCGCAGCTGCTCACG | + |
|
Preference number: 1 (lower is better) Translates to: GPHTPSATVGGMRST*LHPLPGLPPSQLLT Trigger: CGTGAGCAGCTGCGAGGGTGGCAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR GCA 90 bp | ACGCTGAGCCAGGCCACCAGGATGCCCAGGGAGATGTTGACCACTTaGCGCACCAAGCAGCCTCTGTCTCTTGGCTTGGGCTGGACCCTT | + |
|
Preference number: 1 (lower is better) Translates to: TLSQATRMPREMLTT*RTKQPLSLGLGWTL Trigger: AAGGGTCCAGCCCAAGCCAAGAGACAGAGGCTGCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCATCCTGGTGGCCTGGCTCAGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 90 bp | TCCCACACTGCATCAGGTGCGCTGGCGTTGGGGCTCACTGTGCCCTaGAGGATCACCTCAGTCCGCTCTTTGGTGACACTTCCAAAGGCC | + |
|
Preference number: 1 (lower is better) Translates to: SHTASGALALGLTVP*RITSVRSLVTLPKA Trigger: GGCCTTTGGAAGTGTCACCAAAGAGCGGACTGAGGTGATCCTGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 90 bp | CCAGGGGTCGCCCGGTTTGCACTTGAACTCATAGTCTTCCCACACTaGATCAGGTGCGCTGGCGTTGGGGCTCACTGTGCCCTGCAGGAT | + |
|
Preference number: 1 (lower is better) Translates to: PGVARFALELIVFPH*IRCAGVGAHCALQD Trigger: ATCCTGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGGGAAGACTATGAGTTCAAGTGCAAACCGGGCGACCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 90 bp | GGAAGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTaGCGGGTCCCTGTGCGGGTCCCGTGGCCGCAGCACAGTATAGGT | + |
|
Preference number: 1 (lower is better) Translates to: GSTSFSNLFLAGSMG*RVPVRVPWPQHSIG Trigger: ACCTATACTGTGCTGCGGCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| 3UTR CCA 90 bp | CCACATCAGCCAGTCCAGGCGGTAGTGGTATGGCGAGATGAGGCATaGCTGCCTCCAGGGGTCGCCCGGTTTGCACTTGAACTCATAGTC | + |
|
Preference number: 1 (lower is better) Translates to: PHQPVQAVVVWRDEA*LPPGVARFALELIV Trigger: GACTATGAGTTCAAGTGCAAACCGGGCGACCCCTGGAGGCAGCCATGCCTCATCTCGCCATACCACTACCGCCTGGACTGGCTGATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 90 bp | CACGAAGTGGTTGCTGAGGGTCTCAAAGCGGTGGAACCACCATGGTaGCCTGTGCAGGTAGTAGGCTATCGGGTTGGGCACGGGCTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: HEVVAEGLKAVEPPW*PVQVVGYRVGHGLS Trigger: ACTCAGCCCGTGCCCAACCCGATAGCCTACTACCTGCACAGGTCACCATGGTGGTTCCACCGCTTTGAGACCCTCAGCAACCACTTCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 90 bp | GGGGCCAGTTCAGGGCTGCTCAGTCTTCTAGTCTCTGGCTGCTACTaGATGCCATCATGGATCAGGGTGCCCAACCCAGGCCCTAGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: GASSGLLSLLVSGCY*MPSWIRVPNPGPSG Trigger: TCCACTAGGGCCTGGGTTGGGCACCCTGATCCATGATGGCATTCAGTAGCAGCCAGAGACTAGAAGACTGAGCAGCCCTGAACTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR GCA 90 bp | GCCCGGTTTGCACTTGAACTCATAGTCTTCCCACACTGCATCAGGTaGGCTGGCGTTGGGGCTCACTGTGCCCTGCAGGATCACCTCAGT | + |
|
Preference number: 1 (lower is better) Translates to: ARFALELIVFPHCIR*AGVGAHCALQDHLS Trigger: ACTGAGGTGATCCTGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGGGAAGACTATGAGTTCAAGTGCAAACCGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CCA 90 bp | AGGGAGGGAAGGGGCCAGTTCAGGGCTGCTCAGTCTTCTAGTCTCTaGCTGCTACTGAATGCCATCATGGATCAGGGTGCCCAACCCAGG | + |
|
Preference number: 1 (lower is better) Translates to: REGRGQFRAAQSSSL*LLLNAIMDQGAQPR Trigger: CCTGGGTTGGGCACCCTGATCCATGATGGCATTCAGTAGCAGCCAGAGACTAGAAGACTGAGCAGCCCTGAACTGGCCCCTTCCCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR CCA 90 bp | AGCATGATTCTGAAGATCAGCCAGCGGAAGCCCCACAGGACAATCTaGGATGTGGGGGTGTTCTTGGGCAGGCGGGACAGTGTCCAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: SMILKISQRKPHRTI*DVGVFLGRRDSVQR Trigger: TCTCTGGACACTGTCCCGCCTGCCCAAGAACACCCCCACATCCCAGATTGTCCTGTGGGGCTTCCGCTGGCTGATCTTCAGAATCATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 90 bp | CGCCAGATGAAGGATCCACTCGTTCTGCTCATAGGTCTGGAAAGCTaGGAACCACATCAGCCAGTCCAGGCGGTAGTGGTATGGCGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: RQMKDPLVLLIGLES*EPHQPVQAVVVWRD Trigger: ATCTCGCCATACCACTACCGCCTGGACTGGCTGATGTGGTTCGCAGCTTTCCAGACCTATGAGCAGAACGAGTGGATCCTTCATCTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CCA 90 bp | CCACTCCCGAGTCTTAAAGTATTCCTTCAGATCCTCAAGGCGGAGTaGGGGGAAGTAAGGACCAATTCGCTTGCGGATCCACCACTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: PLPSLKVFLQILKAE*GEVRTNSLADPPLA Trigger: GGCAAGTGGTGGATCCGCAAGCGAATTGGTCCTTACTTCCCCCCACTCCGCCTTGAGGATCTGAAGGAATACTTTAAGACTCGGGAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CAA 90 bp | TGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTaGGCTGCATCCCTTGCCTGGGCTGCCACCCTCGCAGCTGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: WSPHPQCHSRRHEEH*AASLAWAATLAAAH Trigger: GTGAGCAGCTGCGAGGGTGGCAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR CAA 90 bp | ACCACGGGTACGCTGAGCCAGGCCACCAGGATGCCCAGGGAGATGTaGACCACTTGCCGCACCAAGCAGCCTCTGTCTCTTGGCTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TTGTLSQATRMPREM*TTCRTKQPLSLGLG Trigger: GCCCAAGCCAAGAGACAGAGGCTGCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCATCCTGGTGGCCTGGCTCAGCGTACCCGTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CAA 90 bp | TACGCTGAGCCAGGCCACCAGGATGCCCAGGGAGATGTTGACCACTaGCCGCACCAAGCAGCCTCTGTCTCTTGGCTTGGGCTGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: YAEPGHQDAQGDVDH*PHQAASVSWLGLDP Trigger: AGGGTCCAGCCCAAGCCAAGAGACAGAGGCTGCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCATCCTGGTGGCCTGGCTCAGCGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCACCAGGATGCCCAGGGAGATGTTGACCACTTGCCGCACCAAGCAGCCTCTGGCTGGGCACGATGGTaGGCCAGTTCAGGAAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GHQDAQGDVDHLPHQAASGWARW*ASSGSS Trigger: TGAGCTTCCTGAACTGGCTCACCATCGTGCCCAGCC...AGAGGCTGCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCATCCTGGTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCCCCCGGGGAGGCTGAACTTGTACCGGTAGTGTTCTCCTCGGATCCACCTGTGGAACCACCATGGTaGCCTGTGCAGGTAGTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LAPGEAELVPVVFSSDPPVEPPW*PVQVVG Trigger: GCCTACTACCTGCACAGGTCACCATGGTGGTTCCAC...AGGTGGATCCGAGGAGAACACTACCGGTACAAGTTCAGCCTCCCCGGGGGCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR TCA 90 bp | TCGAAGCAGGCAAGGCTGGGCACGATGGTGAGCCAGTTCAGGAAGCTCAGGTTCCCACGAAGTGGTTGCTaGGGGTCTCAAAGCGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SKQARLGTMVSQFRKLRFPRSGC*GSQSGG Trigger: TCCACCGCTTTGAGACCCTCAGCAACCACTTCGTGG...GAACCTGAGCTTCCTGAACTGGCTCACCATCGTGCCCAGCCTTGCCTGCTTCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGTGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCAGTCTTCTAGTCTCTaGCTGCTACTGAATGCCATC | + |
|
Preference number: 2 (lower is better) Translates to: AGGPHTPSATVGGMRSTWQSSSL*LLLNAI Trigger: GATGGCATTCAGTAGCAGCCAGAGACTAGAAGACTG...CCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCACCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR CAA 90 bp | AGCGGGTTGAAGGAGGTGTTCATGATCTGCCTGGAGCTTAGCAGATaGATAACCACGGGTACGCTGAGCCAGGCCACCAGGATGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SGLKEVFMICLELSR*ITTGTLSQATRMPR Trigger: CCTGGGCATCCTGGTGGCCTGGCTCAGCGTACCCGTGGTTATCAATCTGCTAAGCTCCAGGCAGATCATGAACACCTCCTTCAACCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGGTGGACACTGCCCACTaGTCACAGACTGGAGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: RCSCPEASPGRQDRPCFLVDTAH*SQTGVN Trigger: ATTCACTCCAGTCTGTGATCAGTGGGCAGTGTCCAC...CAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGACAGCTGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR-3UTR GCA 90 bp | GAACCACATCAGCCAGTCCAGGCGGTAGTGGTATGGCGAGATGAGGCATGGCTGCATAGTGGAAGTCCATaGAGGTCAGATCCAGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: EPHQPVQAVVVWRDEAWLHSGSP*RSDPAS Trigger: GCTGGCTGGATCTGACCTGCATGGACTTCCACTATG...CAGCCATGCCTCATCTCGCCATACCACTACCGCCTGGACTGGCTGATGTGGTTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCGCTGGCGTTGGGGCTCACTGTGCCCTGCAGGATCACCTCAGTCCGCTCTTTGAGGTGTTCATGATCTaGCTGGAGCTTAGCAGATTG | + |
|
Preference number: 2 (lower is better) Translates to: CAGVGAHCALQDHLSPLFEVFMI*LELSRL Trigger: CAATCTGCTAAGCTCCAGGCAGATCATGAACACCTC...AAAGAGCGGACTGAGGTGATCCTGCAGGGCACAGTGAGCCCCAACGCCAGCGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAAGGCACAAGAAGCTCCACGAAGTGGTTGCTGAGGGTCTCAAAGCGGTGGGGACAATCTGGGATGTaGGGGTGTTCTTGGGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KKGTRSSTKWLLRVSKRWGQSGM*GCSWAG Trigger: GCCTGCCCAAGAACACCCCCACATCCCAGATTGTCC...CCACCGCTTTGAGACCCTCAGCAACCACTTCGTGGAGCTTCTTGTGCCTTTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACCACATCAGCCAGTCCAGGCGGTAGTGGTATGGCGAGATGAGGCATGGCTGAGAAGCTCCACGAAGTaGTTGCTGAGGGTCTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: EPHQPVQAVVVWRDEAWLRSSTK*LLRVSK Trigger: CTTTGAGACCCTCAGCAACCACTTCGTGGAGCTTCT...CAGCCATGCCTCATCTCGCCATACCACTACCGCCTGGACTGGCTGATGTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCAGGACTTGCTTCTTTAGGCCTTGAGGTCCTGAGGGAAACAGGAATCCCAATCTGCAGCACTCCATaGAGAATGCGCATCCGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: SPGLASLGLEVLRETGIPICSTP*RMRIRR Trigger: ACGGCGGATGCGCATTCTTCATGGAGTGCTGCAGAT...TGGGATTCCTGTTTCCCTCAGGACCTCAAGGCCTAAAGAAGCAAGTCCTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGGTAGTGGCCACTCCCGAGTCTTAAAGTATTCCTTCAGATCCTCAAGGCGGTGCTTCTTTAGGCCTTaGGGTCCTGAGGGAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SGSGHSRVLKYSFRSSRRCFFRP*GPEGNR Trigger: CCTGTTTCCCTCAGGACCTCAAGGCCTAAAGAAGCA...CCGCCTTGAGGATCTGAAGGAATACTTTAAGACTCGGGAGTGGCCACTACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGACGATCCTGAGCGGGTTGAAGGAGGTGTTCATGATCTGCCTGGAGCTTAGCTGTGTATCTTCCCTCTaGATCTCCAGGACTTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LTILSGLKEVFMICLELSCVSSL*ISRTCF Trigger: GAAGCAAGTCCTGGAGATTCAGAGGGAAGATACACA...GCTAAGCTCCAGGCAGATCATGAACACCTCCTTCAACCCGCTCAGGATCGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGACGATCCTGAGCGGGTTGAAGGAGGTGTTCATGATCTGCCTGGAGCTTAGCATGATGAGGATCACCTaGAAAAGGATCTGCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: LTILSGLKEVFMICLELSMMRIT*KRICST Trigger: AGTGCTGCAGATCCTTTTCCAGGTGATCCTCATCAT...GCTAAGCTCCAGGCAGATCATGAACACCTCCTTCAACCCGCTCAGGATCGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 72 bp | CCCTCGCAGCTGCTCACGGCCCCTCAGCGCCCCTCCTaGCAGCTGTGGGCAGCTCCAGGTGCAGCTGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PSQLLTAPQRPS*QLWAAPGAAVL Trigger: CAGGACAGCTGCACCTGGAGCTGCCCACAGCTGTCAGGAGGGGCGCTGAGGGGCCGTGAGCAGCTGCGAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR GCA 72 bp | GGCTGCATCCCTTGCCTGGGCTGCCACCCTCGCAGCTaGTCACGGCCCCTCAGCGCCCCTCCTGACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GCIPCLGCHPRS*SRPLSAPPDSC Trigger: ACAGCTGTCAGGAGGGGCGCTGAGGGGCCGTGAGCAGCTGCGAGGGTGGCAGCCCAGGCAAGGGATGCAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| 3UTR TCA 72 bp | ACTTGCCCTGGGTGGCGTGCTGGCCCCCGGGGAGGCTaGACTTGTACCGGTAGTGTTCTCCTCGGATCCACC | + |
|
Preference number: 3 (lower is better) Translates to: TCPGWRAGPRGG*TCTGSVLLGST Trigger: GGTGGATCCGAGGAGAACACTACCGGTACAAGTTCAGCCTCCCCGGGGGCCAGCACGCCACCCAGGGCAAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 72 bp | ACATCAGCCAGTCCAGGCGGTAGTGGTATGGCGAGATaGGGCATGGCTGCCTCCAGGGGTCGCCCGGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TSASPGGSGMAR*GMAASRGRPVC Trigger: GCAAACCGGGCGACCCCTGGAGGCAGCCATGCCTCATCTCGCCATACCACTACCGCCTGGACTGGCTGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | TCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTaGCGGGTCCCTGTGCGGGTCCCGTGGCCGCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SFSNLFLAGSMG*RVPVRVPWPQH Trigger: GTGCTGCGGCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| 3UTR GCA 72 bp | CAGGCCACCAGGATGCCCAGGGAGATGTTGACCACTTaGCGCACCAAGCAGCCTCTGTCTCTTGGCTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QATRMPREMLTT*RTKQPLSLGLG Trigger: GCCCAAGCCAAGAGACAGAGGCTGCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCATCCTGGTGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CCA 72 bp | TCAGCCAGCGGAAGCCCCACAGGACAATCTGGGATGTaGGGGTGTTCTTGGGCAGGCGGGACAGTGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SASGSPTGQSGM*GCSWAGGTVSR Trigger: TCTGGACACTGTCCCGCCTGCCCAAGAACACCCCCACATCCCAGATTGTCCTGTGGGGCTTCCGCTGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CCA 72 bp | CCAGTCCAGGCGGTAGTGGTATGGCGAGATGAGGCATaGCTGCCTCCAGGGGTCGCCCGGTTTGCACTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PVQAVVVWRDEA*LPPGVARFALE Trigger: TTCAAGTGCAAACCGGGCGACCCCTGGAGGCAGCCATGCCTCATCTCGCCATACCACTACCGCCTGGACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCACACTGCATCAGGTGCGCTGGCGTTGGGGCTCACTGTGCCCTGCAGGATAGCTCCACGAAGTGGTaGCTGAGGGTCTCAAAGCGG | + |
|
Preference number: 3 (lower is better) Translates to: FPHCIRCAGVGAHCALQDSSTKW*LRVSKR Trigger: CCGCTTTGAGACCCTCAGCAACCACTTCGTGGAGCT...ATCCTGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 72 bp | GGCATGGCTGCCTCCAGGGGTCGCCCGGTTTGCACTTaGACTCATAGTCTTCCCACACTGCATCAGGTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: GMAASRGRPVCT*THSLPTLHQVR Trigger: GCGCACCTGATGCAGTGTGGGAAGACTATGAGTTCAAGTGCAAACCGGGCGACCCCTGGAGGCAGCCATGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | GGTTGGGCACGGGCTGAGTCTCATAGTGGAAGTCCATaGAGGTCAGATCCAGCCAGCACTTGTCCCCGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: GWARAESHSGSP*RSDPASTCPRG Trigger: TCCGCGGGGACAAGTGCTGGCTGGATCTGACCTGCATGGACTTCCACTATGAGACTCAGCCCGTGCCCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | GCATCAGGTGCGCTGGCGTTGGGGCTCACTGTGCCCTaGAGGATCACCTCAGTCCGCTCTTTGGTGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: ASGALALGLTVP*RITSVRSLVTL Trigger: AAGTGTCACCAAAGAGCGGACTGAGGTGATCCTGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CCA 72 bp | AGCCCCACAGGACAATCTGGGATGTGGGGGTGTTCTTaGGCAGGCGGGACAGTGTCCAGAGAGGGCTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPTGQSGMWGCS*AGGTVSREGSE Trigger: TTCTGAGCCCTCTCTGGACACTGTCCCGCCTGCCCAAGAACACCCCCACATCCCAGATTGTCCTGTGGGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | GCCCGGTTTGCACTTGAACTCATAGTCTTCCCACACTaGATCAGGTGCGCTGGCGTTGGGGCTCACTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ARFALELIVFPH*IRCAGVGAHCA Trigger: GGCACAGTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGGGAAGACTATGAGTTCAAGTGCAAACCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 72 bp | GTTGCTGAGGGTCTCAAAGCGGTGGAACCACCATGGTaGCCTGTGCAGGTAGTAGGCTATCGGGTTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VAEGLKAVEPPW*PVQVVGYRVGH Trigger: GTGCCCAACCCGATAGCCTACTACCTGCACAGGTCACCATGGTGGTTCCACCGCTTTGAGACCCTCAGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | GCACTTGAACTCATAGTCTTCCCACACTGCATCAGGTaGGCTGGCGTTGGGGCTCACTGTGCCCTGCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ALELIVFPHCIR*AGVGAHCALQD Trigger: ATCCTGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGGGAAGACTATGAGTTCAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CCA 72 bp | ACCATGGTGACCTGTGCAGGTAGTAGGCTATCGGGTTaGGCACGGGCTGAGTCTCATAGTGGAAGTCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: TMVTCAGSRLSG*ARAESHSGSPC Trigger: GCATGGACTTCCACTATGAGACTCAGCCCGTGCCCAACCCGATAGCCTACTACCTGCACAGGTCACCATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGGCTCACTGTGCCCTGCAGGATCACCTCAGTCCGCTCTTTGGTGACACTTACGATCCTGAGCGGGTaGAAGGAGGTGTTCATGATC | + |
|
Preference number: 3 (lower is better) Translates to: LGLTVPCRITSVRSLVTLTILSG*KEVFMI Trigger: GATCATGAACACCTCCTTCAACCCGCTCAGGATCGT...AAGTGTCACCAAAGAGCGGACTGAGGTGATCCTGCAGGGCACAGTGAGCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 72 bp | GGAAGAAAGGCACAAGAAGCTCCACGAAGTGGTTGCTaGGGGTCTCAAAGCGGTGGAACCACCATGGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: GRKAQEAPRSGC*GSQSGGTTMVT Trigger: GGTCACCATGGTGGTTCCACCGCTTTGAGACCCTCAGCAACCACTTCGTGGAGCTTCTTGTGCCTTTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | AAGGATCCACTCGTTCTGCTCATAGGTCTGGAAAGCTaGGAACCACATCAGCCAGTCCAGGCGGTAGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: KDPLVLLIGLES*EPHQPVQAVVV Trigger: TACCACTACCGCCTGGACTGGCTGATGTGGTTCGCAGCTTTCCAGACCTATGAGCAGAACGAGTGGATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR TCA 72 bp | ATGAGGATCACCTGGAAAAGGATCTGCAGCACTCCATaGAGAATGCGCATCCGCCGTCCAAGGAACAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MRITWKRICSTP*RMRIRRPRNRK Trigger: CTTCCTGTTCCTTGGACGGCGGATGCGCATTCTTCATGGAGTGCTGCAGATCCTTTTCCAGGTGATCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | TCACCTGGAAAAGGATCTGCAGCACTCCATGAAGAATaGGCATCCGCCGTCCAAGGAACAGGAAGAAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPGKGSAALHEE*ASAVQGTGRKA Trigger: TGCCTTTCTTCCTGTTCCTTGGACGGCGGATGCGCATTCTTCATGGAGTGCTGCAGATCCTTTTCCAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR GCA 72 bp | ACGATCCTGAGCGGGTTGAAGGAGGTGTTCATGATCTaGCTGGAGCTTAGCAGATTGATAACCACGGGTACG | + |
|
Preference number: 3 (lower is better) Translates to: TILSGLKEVFMI*LELSRLITTGT Trigger: CGTACCCGTGGTTATCAATCTGCTAAGCTCCAGGCAGATCATGAACACCTCCTTCAACCCGCTCAGGATCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CCA 72 bp | AGTCTTAAAGTATTCCTTCAGATCCTCAAGGCGGAGTaGGGGGAAGTAAGGACCAATTCGCTTGCGGATCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLKVFLQILKAE*GEVRTNSLADP Trigger: TGGATCCGCAAGCGAATTGGTCCTTACTTCCCCCCACTCCGCCTTGAGGATCTGAAGGAATACTTTAAGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGGCTTGCCCTGGGTGGCGTaGTGGCCCCCGGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQDPWAAGSLCGSRGLPWVA*WPPGRL Trigger: CAGCCTCCCCGGGGGCCAGCACGCCACCCAGGGCAA...GCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | ATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGGCCCCTGGGTGGCGTGCTaGCCCCCGGGGAGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQDPWAAGSLCGSRGPWVAC*PPGRLN Trigger: GTTCAGCCTCCCCGGGGGCCAGCACGCCACCCAGGG...GCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGATCCACCACTTGCCCTaGGTGGCGTGCTGGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QSLLGRIHGLPGPCAGPVIHHLP*VACWPP Trigger: CGGGGGCCAGCACGCCACCCAGGGCAAGTGGTGGAT...CACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| 3UTR CAA 72 bp | CACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTaGGCTGCATCCCTTGCCTGGGCTGCCACCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPQCHSRRHEEH*AASLAWAATLA Trigger: TGCGAGGGTGGCAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTCAGGTGCGCTGGCGTTaGGGCTCACTGTGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PISSWQDPWAAGSLCGSRQVRWR*GSLCPA Trigger: TGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTG...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | CTGACAGCTGTGGGCAGCTCCAGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGACAGGTGCGCTGGCGTTaGGGCTCACTGTGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTAVGSSRCSCPEASPGRQVRWR*GSLCPA Trigger: TGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTG...TCTCCCTGGAGAAGCCTCAGGACAGCTGCACCTGGAGCTGCCCACAGCTGTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCAGGCTGGGCACGATGGTaGGCCAGTTCAGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSPHPQCHSRRHEEHLAAGWARW*ASSGSS Trigger: TGAGCTTCCTGAACTGGCTCACCATCGTGCCCAGCC...TGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | CAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGTGCCCAGGGAGATGTTaGCCACTTGCCGCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLLGRIHGLPGPCAGPVCPGRC*PLAAPS Trigger: GCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCA...CACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | TGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCATGCCCAGGGAGATGTTaGCCACTTGCCGCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPHPQCHSRRHEEHLAACPGRC*PLAAPS Trigger: GCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCA...TGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTAGGCAGCCCAGCCAGTaGTGCCCTGGAAGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PISSWQDPWAAGSLCGSRRQPSQ*CPGSTP Trigger: AGGAGTACTTCCAGGGCAGCACTGGCTGGGCTGCCT...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGGGCTCACTGTGCCCTaGAGGATCACCTCAGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FQSLLGRIHGLPGPCAGPGLTVP*RITSVR Trigger: GCGGACTGAGGTGATCCTGCAGGGCACAGTGAGCCC...GGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTTTGCCCTGGGTGGCGTaGTGGCCCCCGGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPLPWVA*WPPGRL Trigger: CAGCCTCCCCGGGGGCCAGCACGCCACCCAGGGCAA...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCTGGTGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTGGACAATCTGGGATGTaGGGGTGTTCTTGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EAGGPHTPSATVGGMRSTGQSGM*GCSWAG Trigger: GCCTGCCCAAGAACACCCCCACATCCCAGATTGTCC...AGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCACCAGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCCCTGGGTGGCGTGCTaGCCCCCGGGGAGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSFSNLFLAGSMGCRVPVPWVAC*PPGRLN Trigger: GTTCAGCCTCCCCGGGGGCCAGCACGCCACCCAGGG...CACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | GCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGACCACTTGCCCTGGGTaGCGTGCTGGCCCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHPFPISSWQDPWAAGSLTTCPG*RAGPRG Trigger: TCCCCGGGGGCCAGCACGCCACCCAGGGCAAGTGGT...CAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTCCACGAAGTGGTTGCTaGGGGTCTCAAAGCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PISSWQDPWAAGSLCGSRPRSGC*GSQSGG Trigger: TCCACCGCTTTGAGACCCTCAGCAACCACTTCGTGG...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTTGGATCTGCAGCACTCCATaGAGAATGCGCATCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AGGPHTPSATVGGMRSTWICSTP*RMRIRR Trigger: ACGGCGGATGCGCATTCTTCATGGAGTGCTGCAGAT...CCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCACCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCTGCCCAGGGAGATGTTaGCCACTTGCCGCACCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQSLLGRIHGLPGPCAGPCPGRC*PLAAPS Trigger: GCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCA...GGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTTCTTCAGGTACAGTTTaGAGGGCAGCAGGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PISSWQDPWAAGSLCGSRSSGTV*RAAGPG Trigger: ACCGGGGCCTGCTGCCCTGCAAACTGTACCTGAAGA...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGGACAATCTGGGATGTaGGGGTGTTCTTGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PISSWQDPWAAGSLCGSRGQSGM*GCSWAG Trigger: GCCTGCCCAAGAACACCCCCACATCCCAGATTGTCC...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTACCACTTGCCCTGGGTaGCGTGCTGGCCCCCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPTTCPG*RAGPRG Trigger: TCCCCGGGGGCCAGCACGCCACCCAGGGCAAGTGGT...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| 3UTR CAA 72 bp | CCAGGCCACCAGGATGCCCAGGGAGATGTTGACCACTaGCCGCACCAAGCAGCCTCTGTCTCTTGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGHQDAQGDVDH*PHQAASVSWLG Trigger: CCCAAGCCAAGAGACAGAGGCTGCTTGGTGCGGCAAGTGGTCAACATCTCCCTGGGCATCCTGGTGGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| CDS-3UTR TCA 90 bp | ATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGGCTGCTTCTTTAGGCCTTaGGGTCCTGAGGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQDPWAAGSLCGSRGCFFRP*GPEGNR Trigger: CCTGTTTCCCTCAGGACCTCAAGGCCTAAAGAAGCA...GCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGGCCATAGTGGAAGTCCATaGAGGTCAGATCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQDPWAAGSLCGSRGHSGSP*RSDPAS Trigger: GCTGGCTGGATCTGACCTGCATGGACTTCCACTATG...GCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCACACTGCATCAGGTaGGCTGGCGTTGGGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGPHCIR*AGVGAH Trigger: GTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGG...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | CATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCCAGGTGCGCTGGCGTTaGGGCTCACTGTGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HPFPISSWQDPWAAGSLCQVRWR*GSLCPA Trigger: TGCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTG...GCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | ACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGATCCACCACTTGCCCTaGGTGGCGTGCTGGCCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TSFSNLFLAGSMGCRVPVIHHLP*VACWPP Trigger: CGGGGGCCAGCACGCCACCCAGGGCAAGTGGTGGAT...CACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | TTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCATCTGCAGCACTCCATaGAGAATGCGCATCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FQSLLGRIHGLPGPCAGPICSTP*RMRIRR Trigger: ACGGCGGATGCGCATTCTTCATGGAGTGCTGCAGAT...GGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | AGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGAGGCAGCCCAGCCAGTaGTGCCCTGGAAGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCSCPEASPGRQDRPCFLRQPSQ*CPGSTP Trigger: AGGAGTACTTCCAGGGCAGCACTGGCTGGGCTGCCT...CAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGACAGCTGCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTTCCCATCCAAGACTGTaGCAGATCTGCCCTACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PISSWQDPWAAGSLCGSRSHPRL*QICPTL Trigger: CAACGTAGGGCAGATCTGCCACAGTCTTGGATGGGA...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063344.15 |
||
| CDS-3UTR CCA 90 bp | ATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGGCAGAAGCTCCACGAAGTaGTTGCTGAGGGTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQDPWAAGSLCGSRGRSSTK*LLRVSK Trigger: CTTTGAGACCCTCAGCAACCACTTCGTGGAGCTTCT...GCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTGTGGAACCACCATGGTaGCCTGTGCAGGTAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGVEPPW*PVQVVG Trigger: GCCTACTACCTGCACAGGTCACCATGGTGGTTCCAC...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCACGAAGTGGTTGCTaGGGGTCTCAAAGCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSNLFLAGSMGCRVPVRVPRSGC*GSQSGG Trigger: TCCACCGCTTTGAGACCCTCAGCAACCACTTCGTGG...GACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | TCCAGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCCACGAAGTGGTTGCTaGGGGTCTCAAAGCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRCSCPEASPGRQDRPCFPRSGC*GSQSGG Trigger: TCCACCGCTTTGAGACCCTCAGCAACCACTTCGTGG...AAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGACAGCTGCACCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | CATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGCTGGGCACGATGGTaGGCCAGTTCAGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPFPISSWQDPWAAGSLCGWARW*ASSGSS Trigger: TGAGCTTCCTGAACTGGCTCACCATCGTGCCCAGCC...GCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCATCCCTTGCCTGGGCTGCGCCCGGTTTGCACTTaGACTCATAGTCTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SATVGGMRSTWLHPLPGLRPVCT*THSLPT Trigger: TGTGGGAAGACTATGAGTTCAAGTGCAAACCGGGCG...CAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTTCTTCAGGTACAGTTTaGAGGGCAGCAGGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGSSGTV*RAAGPG Trigger: ACCGGGGCCTGCTGCCCTGCAAACTGTACCTGAAGA...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGGACAAAGGACGAGATaGCCAGCCCAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQSLLGRIHGLPGPCAGPGQRTR*PAQEEQ Trigger: TTGCTCTTCTTGGGCTGGGCATCTCGTCCTTTGTCC...GGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | CTGACAGCTGTGGGCAGCTCCAGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGAGGACAAAGGACGAGATaGCCAGCCCAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTAVGSSRCSCPEASPGRGQRTR*PAQEEQ Trigger: TTGCTCTTCTTGGGCTGGGCATCTCGTCCTTTGTCC...TCTCCCTGGAGAAGCCTCAGGACAGCTGCACCTGGAGCTGCCCACAGCTGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGGCGAGGTGTTCATGATCTaGCTGGAGCTTAGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: ISSWQDPWAAGSLCGSRGEVFMI*LELSRL Trigger: CAATCTGCTAAGCTCCAGGCAGATCATGAACACCTC...GCCACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGCTGGTGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCGAGGTGTTCATGATCTaGCTGGAGCTTAGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SEAGGPHTPSATVGGMRSEVFMI*LELSRL Trigger: CAATCTGCTAAGCTCCAGGCAGATCATGAACACCTC...GCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCACCAGCCTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGGGCTCACTGTGCCCTaGAGGATCACCTCAGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPGLTVP*RITSVR Trigger: GCGGACTGAGGTGATCCTGCAGGGCACAGTGAGCCC...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTCCACACTGCATCAGGTaGGCTGGCGTTGGGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPPHCIR*AGVGAH Trigger: GTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGG...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTCAGCATCAACCACACTGCATCAGGTaGGCTGGCGTTGGGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLQGDRTDRVFCQHQPHCIR*AGVGAH Trigger: GTGAGCCCCAACGCCAGCGCACCTGATGCAGTGTGG...TTGATGCTGACAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | CAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGATAGGTCTGGAAAGCTaGGAACCACATCAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSLLGRIHGLPGPCAGPVIGLES*EPHQPV Trigger: GACTGGCTGATGTGGTTCGCAGCTTTCCAGACCTAT...CACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGTGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCCCTGGAAGTACTCCTaGACATTCTTCAGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGGPHTPSATVGGMRSTWPWKYS*TFFRYS Trigger: ACTGTACCTGAAGAATGTCCAGGAGTACTTCCAGGG...CCAAGTGCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCACCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | CAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGCAACCACATAATGGTTaGTGCATAGGTCCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSLLGRIHGLPGPCAGPVQPHNG*CIGPGS Trigger: GCTGCCTGGACCTATGCACCAACCATTATGTGGTTG...CACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | GCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCATCCCTTGCCTGGGCTGCCAAGAAGCTCCACGAAGTaGTTGCTGAGGGTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ATVGGMRSTWLHPLPGLPRSSTK*LLRVSK Trigger: CTTTGAGACCCTCAGCAACCACTTCGTGGAGCTTCT...TGGCAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCAGGCGGTAGTGGTATaGCGAGATGAGGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSNLFLAGSMGCRVPVRVQAVVV*RDEAWL Trigger: CAGCCATGCCTCATCTCGCCATACCACTACCGCCTG...GACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCATCCCTTGCCTGGGCTGGGGCCTTGTTCTGATTaGATGCCACCAAAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SATVGGMRSTWLHPLPGLGPCSD*MPPKRP Trigger: TGGCCTTTTTGGTGGCATTCAATCAGAACAAGGCCC...CAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTATCTGCAGCACTCCATaGAGAATGCGCATCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGICSTP*RMRIRR Trigger: ACGGCGGATGCGCATTCTTCATGGAGTGCTGCAGAT...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGGCTGGGCACGATGGTaGGCCAGTTCAGGAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPGWARW*ASSGSS Trigger: TGAGCTTCCTGAACTGGCTCACCATCGTGCCCAGCC...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | TCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGTGTATCTTCCCTCTaGATCTCCAGGACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNLFLAGSMGCRVPVRVPCVSSL*ISRTCF Trigger: GAAGCAAGTCCTGGAGATTCAGAGGGAAGATACACA...CGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | CCGACCGTGTTTTCTGTCAGCATCAATGGTAGGCAGGGTAGAGGGAGGGAAGGGTCTTCAGGTACAGTTTaGAGGGCAGCAGGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTVFSVSINGRQGRGREGSSGTV*RAAGPG Trigger: ACCGGGGCCTGCTGCCCTGCAAACTGTACCTGAAGA...CCCTTCCCTCCCTCTACCCTGCCTACCATTGATGCTGACAGAAAACACGGTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | CACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTCAGCCCAGCCAGTGCTaGCCTGGAAGTACTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HILFQSLLGRIHGLPGPCQPSQC*PGSTPG Trigger: TCCAGGAGTACTTCCAGGGCAGCACTGGCTGGGCTG...ACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTCAGCCCAGCCAGTGCTaGCCTGGAAGTACTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPQPSQC*PGSTPG Trigger: TCCAGGAGTACTTCCAGGGCAGCACTGGCTGGGCTG...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTCAGCATCAACAGCCCAGCCAGTGCTaGCCTGGAAGTACTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLQGDRTDRVFCQHQQPSQC*PGSTPG Trigger: TCCAGGAGTACTTCCAGGGCAGCACTGGCTGGGCTG...TTGATGCTGACAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTAGGCAGCCCAGCCAGTaGTGCCCTGGAAGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPRQPSQ*CPGSTP Trigger: AGGAGTACTTCCAGGGCAGCACTGGCTGGGCTGCCT...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | TCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGGAGGTGTTCATGATCTaGCTGGAGCTTAGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SNLFLAGSMGCRVPVRVPEVFMI*LELSRL Trigger: CAATCTGCTAAGCTCCAGGCAGATCATGAACACCTC...CGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCTAGTCTCTGGCTGCTACTGAATGCCATCATGGATCAGGGTGCCCAACCCGGGCTCACTGTGCCCTaGAGGATCACCTCAGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLWLLLNAIMDQGAQPGLTVP*RITSVR Trigger: GCGGACTGAGGTGATCCTGCAGGGCACAGTGAGCCC...GGGTTGGGCACCCTGATCCATGATGGCATTCAGTAGCAGCCAGAGACTAGAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | CATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGACAATCTGGGATGTaGGGGTGTTCTTGGGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPFPISSWQDPWAAGSLCGQSGM*GCSWAG Trigger: GCCTGCCCAAGAACACCCCCACATCCCAGATTGTCC...GCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| 3UTR CAA 72 bp | CAGGTCAGATCCAGCCAGCACTTGTCCCCGCGGACCTaGATGAGGCCCGCTCCAAGCATGATTCTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: QVRSSQHLSPRT*MRPAPSMILKI Trigger: GATCTTCAGAATCATGCTTGGAGCGGGCCTCATCAAGGTCCGCGGGGACAAGTGCTGGCTGGATCTGACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCGGGCCTTGTTCTGATTaGATGCCACCAAAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPISSWQDPWAAGSLCGSGPCSD*MPPKRP Trigger: TGGCCTTTTTGGTGGCATTCAATCAGAACAAGGCCC...GGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGTTGAAGTTCATGTCTaGCCAGTCCAACAACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PISSWQDPWAAGSLCGSRVEVHV*PVQQPH Trigger: ATGTGGTTGTTGGACTGGTCAGACATGAACTTCAAC...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGAGATCTGCCCTACGTTaGCCAGGGACATGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILFQSLLGRIHGLPGPCARSALR*PGTCRG Trigger: CCCTCTACATGTCCCTGGTCAACGTAGGGCAGATCT...CGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | AGCTGTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTCAGCAAGATCTGCCCTACGTTaGCCAGGGACATGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCPEASPGRQDRPCFLSARSALR*PGTCRG Trigger: CCCTCTACATGTCCCTGGTCAACGTAGGGCAGATCT...TGCTGACAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | AAGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCGTGGAACCACCATGGTaGCCTGTGCAGGTAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KHILFQSLLGRIHGLPGPVEPPW*PVQVVG Trigger: GCCTACTACCTGCACAGGTCACCATGGTGGTTCCAC...GGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTCAGCATCAATGGTAGGGTGGAACCACCATGGTaGCCTGTGCAGGTAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFSRETGPTVFSVSINGRVEPPW*PVQVVG Trigger: GCCTACTACCTGCACAGGTCACCATGGTGGTTCCAC...CCTACCATTGATGCTGACAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTTGCTTCTTTAGGCCTTaGGGTCCTGAGGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGCFFRP*GPEGNR Trigger: CCTGTTTCCCTCAGGACCTCAAGGCCTAAAGAAGCA...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTGCTTCTTTAGGCCTTaGGGTCCTGAGGGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCSCPEASPGRQDRPCFLCFFRP*GPEGNR Trigger: CCTGTTTCCCTCAGGACCTCAAGGCCTAAAGAAGCA...CAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGACAGCTGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | CACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTCAGAAGGTGCCCGTGTaGAGCCGAGCTGGAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: HILFQSLLGRIHGLPGPCQKVPV*SRAGES Trigger: AGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTG...ACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | AAGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCCAGAAGGTGCCCGTGTaGAGCCGAGCTGGAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KHILFQSLLGRIHGLPGPQKVPV*SRAGES Trigger: AGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTG...GGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCATAGTGGAAGTCCATaGAGGTCAGATCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGHSGSP*RSDPAS Trigger: GCTGGCTGGATCTGACCTGCATGGACTTCCACTATG...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCATAGTGGAAGTCCATaGAGGTCAGATCCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRCSCPEASPGRQDRPCFHSGSP*RSDPAS Trigger: GCTGGCTGGATCTGACCTGCATGGACTTCCACTATG...AAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGACAGCTGCACCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | TTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCATAGGTCTGGAAAGCTaGGAACCACATCAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPISSWQDPWAAGSLCGSIGLES*EPHQPV Trigger: GACTGGCTGATGTGGTTCGCAGCTTTCCAGACCTAT...GGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | TTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCCCCTGGAAGTACTCCTaGACATTCTTCAGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQSLLGRIHGLPGPCAGPPWKYS*TFFRYS Trigger: ACTGTACCTGAAGAATGTCCAGGAGTACTTCCAGGG...GGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | CAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGATGATGAGGATCACCTaGAAAAGGATCTGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QSLLGRIHGLPGPCAGPVMMRIT*KRICST Trigger: AGTGCTGCAGATCCTTTTCCAGGTGATCCTCATCAT...CACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCTCCAGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTATGATGAGGATCACCTaGAAAAGGATCTGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: AAPGAAVLRLLQGDRTDRMMRIT*KRICST Trigger: AGTGCTGCAGATCCTTTTCCAGGTGATCCTCATCAT...ACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGACAGCTGCACCTGGAGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | AGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTCAGGCGGTAGTGGTATaGCGAGATGAGGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STSFSNLFLAGSMGCRVPQAVVV*RDEAWL Trigger: CAGCCATGCCTCATCTCGCCATACCACTACCGCCTG...AGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTCAGCATCAATGGTAGGCAGGCGGTAGTGGTATaGCGAGATGAGGCATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSRETGPTVFSVSINGRQAVVV*RDEAWL Trigger: CAGCCATGCCTCATCTCGCCATACCACTACCGCCTG...CCTACCATTGATGCTGACAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCGGGCCTTGTTCTGATTaGATGCCACCAAAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSNLFLAGSMGCRVPVRVGPCSD*MPPKRP Trigger: TGGCCTTTTTGGTGGCATTCAATCAGAACAAGGCCC...GACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | AAGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCAGATCTGCCCTACGTTaGCCAGGGACATGTAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KHILFQSLLGRIHGLPGPRSALR*PGTCRG Trigger: CCCTCTACATGTCCCTGGTCAACGTAGGGCAGATCT...GGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | CATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCTGTTTCCAGCAGCTGTaGCTCCCATCCAAGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HPFPISSWQDPWAAGSLCCFQQL*LPSKTV Trigger: CACAGTCTTGGATGGGAGTCACAGCTGCTGGAAACA...GCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063344.15 |
||
| CDS-3UTR TCA 90 bp | TGGATCAGGGTGCCCAACCCAGGCCCTAGTGGACACTGCCCACTGATCACAGACTGTGTATCTTCCCTCTaGATCTCCAGGACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WIRVPNPGPSGHCPLITDCVSSL*ISRTCF Trigger: GAAGCAAGTCCTGGAGATTCAGAGGGAAGATACACA...GTCTGTGATCAGTGGGCAGTGTCCACTAGGGCCTGGGTTGGGCACCCTGATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR TCA 90 bp | AGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCATCCCTTGCCTGGGCTGTGTTTCCAGCAGCTGTaGCTCCCATCCAAAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: SATVGGMRSTWLHPLPGLCFQQL*LPSKRI Trigger: TATTCTTTTGGATGGGAGTCACAGCTGCTGGAAACA...CAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | GAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTCAGCATCAATGGTACAGAAGGTGCCCGTGTaGAGCCGAGCTGGAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: EASPGRQDRPCFLSASMVQKVPV*SRAGES Trigger: AGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTG...TACCATTGATGCTGACAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGACAAAGGACGAGATaGCCAGCCCAAGAAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILFQSLLGRIHGLPGPCAGQRTR*PAQEEQ Trigger: TTGCTCTTCTTGGGCTGGGCATCTCGTCCTTTGTCC...CGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| 3UTR CAA 72 bp | AAGGAGGTGTTCATGATCTGCCTGGAGCTTAGCAGATaGATAACCACGGGTACGCTGAGCCAGGCCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEVFMICLELSR*ITTGTLSQATR Trigger: CCTGGTGGCCTGGCTCAGCGTACCCGTGGTTATCAATCTGCTAAGCTCCAGGCAGATCATGAACACCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTTGTGTATCTTCCCTCTaGATCTCCAGGACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGCVSSL*ISRTCF Trigger: GAAGCAAGTCCTGGAGATTCAGAGGGAAGATACACA...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | ACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGCCCGGTTTGCACTTaGACTCATAGTCTTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSFSNLFLAGSMGCRVPVRPVCT*THSLPT Trigger: TGTGGGAAGACTATGAGTTCAAGTGCAAACCGGGCG...CACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | AAGCATGATTCTGAAGATCAGCCAGCGGAAGCCCCACAGGACAATCTGGGATGTCAGAAGGTGCCCGTGTaGAGCCGAGCTGGAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KHDSEDQPAEAPQDNLGCQKVPV*SRAGES Trigger: AGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTG...ACATCCCAGATTGTCCTGTGGGGCTTCCGCTGGCTGATCTTCAGAATCATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCCTGGAAGTACTCCTaGACATTCTTCAGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSNLFLAGSMGCRVPVRVPWKYS*TFFRYS Trigger: ACTGTACCTGAAGAATGTCCAGGAGTACTTCCAGGG...GACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGAGAAGCTCCACGAAGTaGTTGCTGAGGGTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILFQSLLGRIHGLPGPCARSSTK*LLRVSK Trigger: CTTTGAGACCCTCAGCAACCACTTCGTGGAGCTTCT...CGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCATGATGAGGATCACCTaGAAAAGGATCTGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FPISSWQDPWAAGSLCGSMMRIT*KRICST Trigger: AGTGCTGCAGATCCTTTTCCAGGTGATCCTCATCAT...GGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAGGCTTCTCCAGGGAGACAGGACCGACCGTGTTTTCTGTCAGCATCAAATAGGTCTGGAAAGCTaGGAACCACATCAGCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRLLQGDRTDRVFCQHQIGLES*EPHQPV Trigger: GACTGGCTGATGTGGTTCGCAGCTTTCCAGACCTAT...TTGATGCTGACAGAAAACACGGTCGGTCCTGTCTCCCTGGAGAAGCCTCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CCA 90 bp | AAGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCCAACCACATAATGGTTaGTGCATAGGTCCAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHILFQSLLGRIHGLPGPQPHNG*CIGPGS Trigger: GCTGCCTGGACCTATGCACCAACCATTATGTGGTTG...GGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| 3UTR CAA 72 bp | AACAGGAAGAAAGGCACAAGAAGCTCCACGAAGTGGTaGCTGAGGGTCTCAAAGCGGTGGAACCACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NRKKGTRSSTKW*LRVSKRWNHHG Trigger: ACCATGGTGGTTCCACCGCTTTGAGACCCTCAGCAACCACTTCGTGGAGCTTCTTGTGCCTTTCTTCCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| 3UTR CAA 72 bp | CAAGCAGCCTCTGTCTCTTGGCTTGGGCTGGACCCTTaGTGTATCTTCCCTCTGAATCTCCAGGACTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAASVSWLGLDP*CIFPLNLQDLL Trigger: AAGCAAGTCCTGGAGATTCAGAGGGAAGATACACAAAGGGTCCAGCCCAAGCCAAGAGACAGAGGCTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137201.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCTGTTTCCAGCAGCTGTaGCTCCCATCCAAAAGAATA | + |
|
Preference number: 4 (lower is better) Translates to: HPFPISSWQDPWAAGSLCCFQQL*LPSKRI Trigger: TATTCTTTTGGATGGGAGTCACAGCTGCTGGAAACA...GCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116641.9 |
||
| CDS-3UTR TCA 90 bp | ACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGGTTGAAGTTCATGTCTaGCCAGTCCAACAACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TSFSNLFLAGSMGCRVPVVEVHV*PVQQPH Trigger: ATGTGGTTGTTGGACTGGTCAGACATGAACTTCAAC...CACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCTTGTTCTGATTGAATaGCACCAAAAAGGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGLVLIE*HQKGHK Trigger: TTTGTGGCCTTTTTGGTGGCATTCAATCAGAACAAG...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTTCAGGTGCGCTGGCGTaGGGGCTCACTGTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PISSWQDPWAAGSLCGSRSGALA*GLTVPC Trigger: GCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGA...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | CTGACAGCTGTGGGCAGCTCCAGGTGCAGCTGTCCTGAGGCTTCTCCAGGGAGATCAGGTGCGCTGGCGTaGGGGCTCACTGTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTAVGSSRCSCPEASPGRSGALA*GLTVPC Trigger: GCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGA...TCTCCCTGGAGAAGCCTCAGGACAGCTGCACCTGGAGCTGCCCACAGCTGTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CAA 90 bp | AGTGAGGCTGGTGGTCCCCACACCCCCAGTGCCACAGTAGGCGGCATGAGGAGCAGCAGCCTCTGTCTCTaGGCTTGGGCTGGACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SEAGGPHTPSATVGGMRSSSLCL*AWAGPF Trigger: AAAGGGTCCAGCCCAAGCCAAGAGACAGAGGCTGCT...GCTCCTCATGCCGCCTACTGTGGCACTGGGGGTGTGGGGACCACCAGCCTCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CAA 90 bp | TCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGAGCTCCACGAAGTGGTaGCTGAGGGTCTCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SNLFLAGSMGCRVPVRVPSSTKW*LRVSKR Trigger: CCGCTTTGAGACCCTCAGCAACCACTTCGTGGAGCT...CGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | GCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTCAGGTGCGCTGGCGTaGGGGCTCACTGTGCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AHPFPISSWQDPWAAGSLSGALA*GLTVPC Trigger: GCAGGGCACAGTGAGCCCCAACGCCAGCGCACCTGA...CAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS GCA 90 bp | AGGGCCCGCAGGAGCACGATTCTAGTCAGCCAGAAGGTGCCCGTGTaGAGCCGAGCTGGAGAATCTGCGGGATCTCTAGCCAGAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RARRSTILVSQKVPV*SRAGESAGSLAREG Trigger: ACCTTCTCTGGCTAGAGATCCCGCAGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTGGCTGACTAGAATCGTGCTCCTGCGGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000137201.8 ENSMUST00000141606.3 |
||
| CDS GCA 90 bp | TCTAGTCAGCCAGAAGGTGCCCGTGTGCAGCCGAGCTGGAGAATCTaGGGGATCTCTAGCCAGAGAAGGTTGCGACGCTGGACTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSQPEGARVQPSWRI*GISSQRRLRRWTVL Trigger: GAGCACAGTCCAGCGTCGCAACCTTCTCTGGCTAGAGATCCCGCAGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTGGCTGACTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000137201.8 ENSMUST00000141606.3 |
||
| CDS CCA 90 bp | GAGCACGATTCTAGTCAGCCAGAAGGTGCCCGTGTGCAGCCGAGCTaGAGAATCTGCGGGATCTCTAGCCAGAGAAGGTTGCGACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EHDSSQPEGARVQPS*RICGISSQRRLRRW Trigger: CCAGCGTCGCAACCTTCTCTGGCTAGAGATCCCGCAGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTGGCTGACTAGAATCGTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000137201.8 ENSMUST00000141606.3 |
||
| CDS-3UTR CAA 90 bp | TTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTCATGAGTATCATGTaGGCACAGCCGGTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQSLLGRIHGLPGPCAGPVMSIM*AQPVTR Trigger: CCTGGTGACCGGCTGTGCCAACATGATACTCATGAC...GGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | CAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTGACGATCCTGAGCGGGTaGAAGGAGGTGTTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: QSLLGRIHGLPGPCAGPVTILSG*KEVFMI Trigger: GATCATGAACACCTCCTTCAACCCGCTCAGGATCGT...CACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | CACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTTTGCGGATCCACCACTaGCCCTGGGTGGCGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HILFQSLLGRIHGLPGPCLRIHH*PWVACW Trigger: CCAGCACGCCACCCAGGGCAAGTGGTGGATCCGCAA...ACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | AAGCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTTGCGGATCCACCACTaGCCCTGGGTGGCGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KHILFQSLLGRIHGLPGPLRIHH*PWVACW Trigger: CCAGCACGCCACCCAGGGCAAGTGGTGGATCCGCAA...GGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCGTCATGAGTATCATGTaGGCACAGCCGGTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPISSWQDPWAAGSLCGSVMSIM*AQPVTR Trigger: CCTGGTGACCGGCTGTGCCAACATGATACTCATGAC...GGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | CCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCCCGTCTTGGGCTGGACCCTTaGTGTATCTTCCCTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PISSWQDPWAAGSLCGSRLGLDP*CIFPLN Trigger: ATTCAGAGGGAAGATACACAAAGGGTCCAGCCCAAG...ACGGGACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | TTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTCAGCAGCCTCTGTCTCTaGGCTTGGGCTGGACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FSNLFLAGSMGCRVPVRVSSLCL*AWAGPF Trigger: AAAGGGTCCAGCCCAAGCCAAGAGACAGAGGCTGCT...GACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGGGTAGCAGCCTCTGTCTCTaGGCTTGGGCTGGACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFQSLLGRIHGLPGPCAGSSLCL*AWAGPF Trigger: AAAGGGTCCAGCCCAAGCCAAGAGACAGAGGCTGCT...ACCCGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS-3UTR CAA 90 bp | AGTGCCACAGTAGGCGGCATGAGGAGCACTTGGCTGCATCCCTTGCCTGGGCTGACGATCCTGAGCGGGTaGAAGGAGGTGTTCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: SATVGGMRSTWLHPLPGLTILSG*KEVFMI Trigger: GATCATGAACACCTCCTTCAACCCGCTCAGGATCGT...CAGCCCAGGCAAGGGATGCAGCCAAGTGCTCCTCATGCCGCCTACTGTGGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS GCA 90 bp | GGGCAGCAGGCCCCGGTCACCGATGAGGGCCTTGTTCTGATTGAATaGCACCAAAAAGGCCACAAAGTAAATGAAAGCGAGGGCCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQQAPVTDEGLVLIE*HQKGHKVNESEGPQ Trigger: CTGCGGGCCCTCGCTTTCATTTACTTTGTGGCCTTTTTGGTGGCATTCAATCAGAACAAGGCCCTCATCGGTGACCGGGGCCTGCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS-3UTR CAA 90 bp | AGTCTCTGGCTGCTACTGAATGCCATCATGGATCAGGGTGCCCAACCCAGGCCCGTCATGAGTATCATGTaGGCACAGCCGGTCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLWLLLNAIMDQGAQPRPVMSIM*AQPVTR Trigger: CCTGGTGACCGGCTGTGCCAACATGATACTCATGAC...GGGCCTGGGTTGGGCACCCTGATCCATGATGGCATTCAGTAGCAGCCAGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CAA 90 bp | GCACATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGAGCTCCACGAAGTGGTaGCTGAGGGTCTCAAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AHPFPISSWQDPWAAGSLSSTKW*LRVSKR Trigger: CCGCTTTGAGACCCTCAGCAACCACTTCGTGGAGCT...CAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS TCA 90 bp | GAGAGGGCTCAGAAAGATCCCCAGGAATCCTGTTTCCAGCAGCTGTaGCTCCCATCCAAGACTGTGGCAGATCTGCCCTACGTTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERAQKDPQESCFQQL*LPSKTVADLPYVDQ Trigger: CTGGTCAACGTAGGGCAGATCTGCCACAGTCTTGGATGGGAGTCACAGCTGCTGGAAACAGGATTCCTGGGGATCTTTCTGAGCCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063344.15 |
||
| CDS-3UTR CAA 90 bp | AGTCTCTGGCTGCTACTGAATGCCATCATGGATCAGGGTGCCCAACCCAGGCCCCTTGGGCTGGACCCTTaGTGTATCTTCCCTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLWLLLNAIMDQGAQPRPLGLDP*CIFPLN Trigger: ATTCAGAGGGAAGATACACAAAGGGTCCAGCCCAAG...GGGCCTGGGTTGGGCACCCTGATCCATGATGGCATTCAGTAGCAGCCAGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141606.3 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTTCCAATCTCTTCTTGGCAGGATCCATGGGCTGCCGGGTCCCTGTGCGCTTGGGCTGGACCCTTaGTGTATCTTCCCTCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILFQSLLGRIHGLPGPCALGLDP*CIFPLN Trigger: ATTCAGAGGGAAGATACACAAAGGGTCCAGCCCAAG...CGCACAGGGACCCGGCAGCCCATGGATCCTGCCAAGAAGAGATTGGAAAAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 |
||
| CDS TCA 90 bp | GCCCAGCCCAAGAAGAGCAATGAGGTCCAGGTTGAAGTTCATGTCTaGCCAGTCCAACAACCACATAATGGTTGGTGCATAGGTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQPKKSNEVQVEVHV*PVQQPHNGWCIGPG Trigger: GCCTGGACCTATGCACCAACCATTATGTGGTTGTTGGACTGGTCAGACATGAACTTCAACCTGGACCTCATTGCTCTTCTTGGGCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS TCA 90 bp | GAGAGGGCTCAGAAAGATCCCCAGGAATCCTGTTTCCAGCAGCTGTaGCTCCCATCCAAAAGAATACCAGATCTGCCCTACGTTGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: ERAQKDPQESCFQQL*LPSKRIPDLPYVDQ Trigger: CTGGTCAACGTAGGGCAGATCTGGTATTCTTTTGGATGGGAGTCACAGCTGCTGGAAACAGGATTCCTGGGGATCTTTCTGAGCCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS GCA 72 bp | CCAGAAGGTGCCCGTGTGCAGCCGAGCTGGAGAATCTaGGGGATCTCTAGCCAGAGAAGGTTGCGACGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PEGARVQPSWRI*GISSQRRLRRW Trigger: CCAGCGTCGCAACCTTCTCTGGCTAGAGATCCCGCAGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000137201.8 ENSMUST00000141606.3 |
||
| CDS CAA 72 bp | CCCTGGAAGTACTCCTGGACATTCTTCAGGTACAGTTaGCAGGGCAGCAGGCCCCGGTCACCGATGAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PWKYSWTFFRYS*QGSRPRSPMRA Trigger: GGCCCTCATCGGTGACCGGGGCCTGCTGCCCTGCAAACTGTACCTGAAGAATGTCCAGGAGTACTTCCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS GCA 72 bp | AGGAGCACGATTCTAGTCAGCCAGAAGGTGCCCGTGTaGAGCCGAGCTGGAGAATCTGCGGGATCTCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSTILVSQKVPV*SRAGESAGSLA Trigger: GGCTAGAGATCCCGCAGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTGGCTGACTAGAATCGTGCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000137201.8 ENSMUST00000141606.3 |
||
| CDS TCA 72 bp | ACTCCCATCCAAGACTGTGGCAGATCTGCCCTACGTTaGCCAGGGACATGTAGAGGGCCCAGAGGGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPIQDCGRSALR*PGTCRGPRGQS Trigger: TGACTGCCCTCTGGGCCCTCTACATGTCCCTGGTCAACGTAGGGCAGATCTGCCACAGTCTTGGATGGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063344.15 |
||
| CDS CCA 72 bp | TCTAGTCAGCCAGAAGGTGCCCGTGTGCAGCCGAGCTaGAGAATCTGCGGGATCTCTAGCCAGAGAAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSQPEGARVQPS*RICGISSQRRL Trigger: CAACCTTCTCTGGCTAGAGATCCCGCAGATTCTCCAGCTCGGCTGCACACGGGCACCTTCTGGCTGACTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000137201.8 ENSMUST00000141606.3 |
||
| CDS GCA 72 bp | TGGTTGGTGCATAGGTCCAGGCAGCCCAGCCAGTGCTaGCCTGGAAGTACTCCTGGACATTCTTCAGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: WLVHRSRQPSQC*PGSTPGHSSGT Trigger: TGTACCTGAAGAATGTCCAGGAGTACTTCCAGGGCAGCACTGGCTGGGCTGCCTGGACCTATGCACCAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS TCA 72 bp | CAGAAAGATCCCCAGGAATCCTGTTTCCAGCAGCTGTaGCTCCCATCCAAGACTGTGGCAGATCTGCCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QKDPQESCFQQL*LPSKTVADLPY Trigger: GTAGGGCAGATCTGCCACAGTCTTGGATGGGAGTCACAGCTGCTGGAAACAGGATTCCTGGGGATCTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063344.15 |
||
| CDS TCA 72 bp | ACTCCCATCCAAAAGAATACCAGATCTGCCCTACGTTaGCCAGGGACATGTAGAGGGCCCAGAGGGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TPIQKNTRSALR*PGTCRGPRGQS Trigger: TGACTGCCCTCTGGGCCCTCTACATGTCCCTGGTCAACGTAGGGCAGATCTGGTATTCTTTTGGATGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS GCA 72 bp | GCCCCGGTCACCGATGAGGGCCTTGTTCTGATTGAATaGCACCAAAAAGGCCACAAAGTAAATGAAAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: APVTDEGLVLIE*HQKGHKVNESE Trigger: CTCGCTTTCATTTACTTTGTGGCCTTTTTGGTGGCATTCAATCAGAACAAGGCCCTCATCGGTGACCGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS TCA 72 bp | CAGAAAGATCCCCAGGAATCCTGTTTCCAGCAGCTGTaGCTCCCATCCAAAAGAATACCAGATCTGCCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: QKDPQESCFQQL*LPSKRIPDLPY Trigger: GTAGGGCAGATCTGGTATTCTTTTGGATGGGAGTCACAGCTGCTGGAAACAGGATTCCTGGGGATCTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS CAA 72 bp | GAGATGCCCAGCCCAAGAAGAGCAATGAGGTCCAGGTaGAAGTTCATGTCTGACCAGTCCAACAACCACATA | + |
|
Preference number: 6 (lower is better) Translates to: EMPSPRRAMRSR*KFMSDQSNNHI Trigger: TATGTGGTTGTTGGACTGGTCAGACATGAACTTCAACCTGGACCTCATTGCTCTTCTTGGGCTGGGCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000141606.3 |
||
| CDS CAA 90 bp | ACAAAGGACGAGATGCCCAGCCCAAGAAGAGCAATGAGGTCCAGGTaGAAGTTCATGTCTGACCAGTCCAACAACCACATAATGGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TKDEMPSPRRAMRSR*KFMSDQSNNHIMVG Trigger: ACCAACCATTATGTGGTTGTTGGACTGGTCAGACATGAACTTCAACCTGGACCTCATTGCTCTTCTTGGGCTGGGCATCTCGTCCTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063344.15 ENSMUST00000116641.9 ENSMUST00000141606.3 |
||