Pregenerated sensors for LMCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057604Ensembl transcript IDs: ENSMUST00000032376.6
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAACTACTGACCCTCTAAGATCTACCACTGCTCAACCTAGAATATaGACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: ETTDPLRSTTAQPRI*TACWPWHPPHRMAS Trigger: TGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAGAGGGTCAGTAGTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR CCA 90 bp | ATATCCTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTaGGAAATTTCTCCTAGGGCTCCCTGGCAGGATACCAGTGTGTCT | + |
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Preference number: 1 (lower is better) Translates to: ISYIYFLIGSLRNAF*EISPRAPWQDTSVS Trigger: AGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAGGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGACCCTCTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGATCCGCCCCATAGGATaGCTTCAGTCTCCTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TDPLRSTTAQPRICTACWIRPIG*LQSPGG Trigger: CCCACCAGGAGACTGAAGCCATCCTATGGGGCGGAT...CCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAGAGGGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR-3UTR CCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCTCCGATAGACTCTGCTaGCTGTGGGCGGGCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LHLLLDWIPQKCILGNFSSDRLC*LWAGSL Trigger: AAGGCTGCCCGCCCACAGCCAGCAGAGTCTATCGGA...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR CCA 72 bp | CCGTGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTaGTGGGATCCGATAGACTCTGCTGGCTGTGGGCGG | + |
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Preference number: 3 (lower is better) Translates to: PWHPPHRMASVS*WDPIDSAGCGR Trigger: CCGCCCACAGCCAGCAGAGTCTATCGGATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR CCA 72 bp | TGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGGTaGGATCCGATAGACTCTGCTGGCTGTGGGCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: WHPPHRMASVSW*DPIDSAGCGRA Trigger: TGCCCGCCCACAGCCAGCAGAGTCTATCGGATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR CCA 72 bp | ACTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGTaGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: TAQPRICTACWP*HPPHRMASVSW Trigger: CCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR GCA 72 bp | GACCCTCTAAGATCTACCACTGCTCAACCTAGAATATaGACTGCTTGCTGGCCGTGGCATCCGCCCCATAGG | + |
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Preference number: 3 (lower is better) Translates to: DPLRSTTAQPRI*TACWPWHPPHR Trigger: CCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR CCA 72 bp | TCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTaGCCGTGGCATCCGCCCCATAGGATGGCTTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: STTAQPRICTAC*PWHPPHRMASV Trigger: GACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR CCA 72 bp | AGAAATGCATTCTGGGAAATTTCTCCTAGGGCTCCCTaGCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: RNAFWEISPRAP*QDTSVSLVGCS Trigger: GCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAATTTCCCAGAATGCATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGGTGGGATCGGAGCTGACCCTTGGTaGCGATGTACGCACGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LAGRGIRPIGWLQSPGGIGADPW*RCTHGR Trigger: GCGGCCGTGCGTACATCGTCACCAAGGGTCAGCTCC...GATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGGTGGGATCGATCTCATCACAGCCTaGGCACCGGGGCCGCACACT | + |
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Preference number: 4 (lower is better) Translates to: LAGRGIRPIGWLQSPGGIDLITA*APGPHT Trigger: AGTGTGCGGCCCCGGTGCTCAGGCTGTGATGAGATC...GATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGGTGGGATCCGGAGCACATTCCCTTaGACCGCAGACAAGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: LAGRGIRPIGWLQSPGGIRSTFP*TADKPL Trigger: GAGTGGCTTGTCTGCGGTGCAAGGGAATGTGCTCCG...GATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | CAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTGGTGGTTGGGGCAGTaGTCTCTGTGCCCTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QPRICTACWPWHPPHRMAWWLGQ*SLCPLA Trigger: AGCCAGAGGGCACAGAGACCACTGCCCCAACCACCA...AGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGGTGGGATCCGATGGGGTTGGTCATaGTCATGCGGTTCCTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: LAGRGIRPIGWLQSPGGIRWGWS*SCGSSY Trigger: ATAAGAGGAACCGCATGATCATGACCAACCCCATCG...GATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | ATTTCTCCTAGGGCTCCCTGGCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCGGCCCAGTTTCTGGGTaGCTCCTGGGGGAGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: ISPRAPWQDTSVSLVGCSGPVSG*LLGEPT Trigger: AGTGGGCTCCCCCAGGAGTCACCCAGAAACTGGGCC...GCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGGTGGGATCATGAGTTCCATGTACTaGAGGCCCAGTTTCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LAGRGIRPIGWLQSPGGIMSSMY*RPSFWV Trigger: CACCCAGAAACTGGGCCTGCAGTACATGGAACTCAT...GATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | AACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTGCTGCCATTGGTGGTTaGGGCAGTGGTCTCTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: NLEYALLAGRGIRPIGWLAAIGG*GSGLCA Trigger: GGCACAGAGACCACTGCCCCAACCACCAATGGCAGC...AAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATCTTATAGATGCGGATaGCGTCTCCGCCTTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: LLNLEYALLAGRGIRPIGSYRCG*RLRLSP Trigger: GGGTGAAAGGCGGAGACGGCATCCGCATCTATAAGA...TCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | AACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCTGGGGCTGCTCCCTTaGAGAGCTCACAGACGTATT | + |
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Preference number: 4 (lower is better) Translates to: NLEYALLAGRGIRPIGWLLGLLP*RAHRRI Trigger: AATACGTCTGTGAGCTCTGCAAGGGAGCAGCCCCAG...AAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCGGCCGCTCAGCAGCTaGTCACAGCCCTCGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: LRSTTAQPRICTACWPWHRPLSS*SQPSQM Trigger: CATTTGCGAGGGCTGTGAGCAGCTGCTGAGCGGCCG...ATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | ATTTCTCCTAGGGCTCCCTGGCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCCCAGGCTGCCATTGGTaGTTGGGGCAGTGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ISPRAPWQDTSVSLVGCSPGCHW*LGQWSL Trigger: CAGAGACCACTGCCCCAACCACCAATGGCAGCCTGG...GCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTGTCCACCAGTGGCTCTaGGCACTTGATACACTGAAA | + |
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Preference number: 4 (lower is better) Translates to: QPRICTACWPWHPPHRMAVHQWL*ALDTLK Trigger: TTTCAGTGTATCAAGTGCTCAGAGCCACTGGTGGAC...AGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | ATTTCTCCTAGGGCTCCCTGGCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCACAAGCCACTCCTCTTaGGGACTGCTGCTGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: ISPRAPWQDTSVSLVGCSTSHSS*GLLLAQ Trigger: TTGGGCCAGCAGCAGTCCGCAAGAGGAGTGGCTTGT...GCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATAGAGGGCACCCTCAGTaGCTGTCACAGGCTGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LRSTTAQPRICTACWPWHRGHPQ*LSQAAS Trigger: AGAGGCAGCCTGTGACAGGCACTGAGGGTGCCCTCT...ATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | ATTTCTCCTAGGGCTCCCTGGCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCTTGACTTGCTGCATGTaGGGCACAGGAGCTGACCCT | + |
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Preference number: 4 (lower is better) Translates to: ISPRAPWQDTSVSLVGCSLTCCM*GTGADP Trigger: AGGGTCAGCTCCTGTGCCCCACATGCAGCAAGTCAA...GCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | ACTGACCCTCTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGGCGGCCACACCAGGGTaGACCATCCTTCCAGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: TDPLRSTTAQPRICTACWAATPG*TILPEV Trigger: TACTTCTGGAAGGATGGTGCACCCTGGTGTGGCCGC...CCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAGAGGGTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | ATTTCTCCTAGGGCTCCCTGGCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCAGTCTTCTGAGAAGATaGTCTCATCACAGCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ISPRAPWQDTSVSLVGCSSLLRR*SHHSLS Trigger: GCTCAGGCTGTGATGAGATCATCTTCTCAGAAGACT...GCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | ACTGACCCTCTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGCCCAAGGACATCTTTTaGACTCCAGGGTTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: TDPLRSTTAQPRICTACWPKDIF*TPGLRS Trigger: GGACCTCAACCCTGGAGTGCAAAAGATGTCCTTGGG...CCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAGAGGGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCTGCAGGCCCAGTTTCTaGGTGACTCCTGGGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LHLLLDWIPQKCILGNFSCRPSF*VTPGGA Trigger: GGCTCCCCCAGGAGTCACCCAGAAACTGGGCCTGCA...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCGTGGGGCACAGGAGCTaGCCCTTGGTGACGATGTAC | + |
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Preference number: 4 (lower is better) Translates to: LHLLLDWIPQKCILGNFSVGHRS*PLVTMY Trigger: GTACATCGTCACCAAGGGTCAGCTCCTGTGCCCCAC...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATAGTGCTCCTCCTGGCTaGATTTACAAGACTTGCATA | + |
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Preference number: 4 (lower is better) Translates to: LRSTTAQPRICTACWPWHSAPPG*IYKTCI Trigger: TATGCAAGTCTTGTAAATGCAGCCAGGAGGAGCACT...ATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCGTGCCTGTCACAGGCTaGCTCTCCTTGGGGATGAGT | + |
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Preference number: 4 (lower is better) Translates to: LHLLLDWIPQKCILGNFSVPVTG*LSLGMS Trigger: ACTCATCCCCAAGGAGAGGCAGCCTGTGACAGGCAC...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | GCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTTTTCTGGGTGACTCCTaGGGGAGCCCACTCGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGYQCVFSWLQLGNNKSIFLGDS*GSPLVG Trigger: ACCTACGAGTGGGCTCCCCCAGGAGTCACCCAGAAA...AATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTGGTATCCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | CATATCCTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATCACCCAGGCTGCCATTaGTGGTTGGGGCAGTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: HILHLLLDWIPQKCILGNHPGCH*WLGQWS Trigger: AGACCACTGCCCCAACCACCAATGGCAGCCTGGGTG...ATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAGGATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCGAGCACTTGATACACTaGAAGCACGTGGGGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHLLLDWIPQKCILGNFSEHLIH*KHVGCH Trigger: GTGGCACCCCACGTGCTTTCAGTGTATCAAGTGCTC...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | GCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTTGGGGTGCCACTGTTTaGTGTATCCAGCCCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: AGYQCVFSWLQLGNNKSIWGATV*CIQPCQ Trigger: CTGACAGGGCTGGATACAGCAAACAGTGGCACCCCA...AATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTGGTATCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | GGATACCAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTACTTTCACCCTGGCGGTaGGAGTGGCATACTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: GYQCVFSWLQLGNNKSILLSPWR*EWHTWS Trigger: ACTCCAAGTATGCCACTCTCACCGCCAGGGTGAAAG...TAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTGGTATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTAAGACTTGCCTCTCCTTGGGGATaGGTTCCATGTACTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QCVFSWLQLGNNKSILRLASPWG*VPCTAG Trigger: GCCTGCAGTACATGGAACTCATCCCCAAGGAGAGGC...AAGTCTTAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | CATATCCTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATCCTTCCAGAAGTAGATaGGGTCCACCAGTGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: HILHLLLDWIPQKCILGNPSRSR*GPPVAL Trigger: CAGAGCCACTGGTGGACCTCATCTACTTCTGGAAGG...ATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAGGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CATATCCTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATCCTCTTGCGGACTGCTaGTGGCCCAAGGACATCTTT | + |
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Preference number: 4 (lower is better) Translates to: HILHLLLDWIPQKCILGNPLADC*WPKDIF Trigger: AAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGG...ATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAGGATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTAAGACTTGCTGTCAACTGGGGCTaGTCCCTTGCAGAGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: QCVFSWLQLGNNKSILRLAVNWG*SLAELT Trigger: TGTGAGCTCTGCAAGGGAGCAGCCCCAGTTGACAGC...AAGTCTTAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | AGCATATCCTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAAGGAGCGTTTTGACTTaGTGCATGTGGGGCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: SISYIYFLIGSLRNAFWERSVLT*CMWGTG Trigger: TCCTGTGCCCCACATGCAGCAAGTCAAAACGCTCCT...TTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAGGATATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCTCAGAGCTTAGGCAGTaGTCCTCCTGGCTGCATTTA | + |
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Preference number: 4 (lower is better) Translates to: LHLLLDWIPQKCILGNFSSELRQ*SSWLHL Trigger: TAAATGCAGCCAGGAGGAGCACTGCCTAAGCTCTGA...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCAGGCAGTGCTCCTCCTaGCTGCATTTACAAGACTTG | + |
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Preference number: 4 (lower is better) Translates to: LHLLLDWIPQKCILGNFSRQCSS*LHLQDL Trigger: CAAGTCTTGTAAATGCAGCCAGGAGGAGCACTGCCT...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| 3UTR CAA 72 bp | GGCTCCCTGGCAGGATACCAGTGTGTCTTTAGTTGGTaGCAGCTAGGAAACAATAAATCCATTCTAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: GSLAGYQCVFSW*QLGNNKSILRL Trigger: AAGTCTTAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTAAGACTTAGCGTTTTGACTTGCTaGATGTGGGGCACAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: QCVFSWLQLGNNKSILRLSVLTC*MWGTGA Trigger: AGCTCCTGTGCCCCACATGCAGCAAGTCAAAACGCT...AAGTCTTAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | GGATACCAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTATACACTGAAAGCACGTaGGGTGCCACTGTTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYQCVFSWLQLGNNKSILYTEST*GATVCC Trigger: ACAGCAAACAGTGGCACCCCACGTGCTTTCAGTGTA...TAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTGGTATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CCA 90 bp | CAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTAAGACTTCGTATTCCACTTCTTTaGATGGATCACCCAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QCVFSWLQLGNNKSILRLRIPLL*MDHPGC Trigger: GCAGCCTGGGTGATCCATCCAAAGAAGTGGAATACG...AAGTCTTAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR TCA 90 bp | GGATACCAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTAACGCTGGTAGTCTTCTaGGAAGATGATCTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: GYQCVFSWLQLGNNKSILTLVVF*EDDLIT Trigger: TGTGATGAGATCATCTTCTCAGAAGACTACCAGCGT...TAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTGGTATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR GCA 90 bp | CTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAATTTCTCCTGCATTTACAAGACTTaGATATTTTCCTCCACGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LHLLLDWIPQKCILGNFSCIYKT*IFSSTS Trigger: ACTCGTGGAGGAAAATATGCAAGTCTTGTAAATGCA...GGAGAAATTTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 90 bp | AGCGTTTTGACTTGCTGCATGTGGGGCACAGGAGCTGACCCTTGGTaGCGATGTACGCACGGCCGCTCAGCAGCTGCTCACAGCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVLTCCMWGTGADPW*RCTHGRSAAAHSPR Trigger: GCGAGGGCTGTGAGCAGCTGCTGAGCGGCCGTGCGTACATCGTCACCAAGGGTCAGCTCCTGTGCCCCACATGCAGCAAGTCAAAACGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 90 bp | CGATGTACGCACGGCCGCTCAGCAGCTGCTCACAGCCCTCGCAAATaGAGTGCTTCCGATGCCAGGCCAGGTCTTCCACACGCTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCTHGRSAAAHSPRK*SASDARPGLPHAGS Trigger: ACTACCAGCGTGTGGAAGACCTGGCCTGGCATCGGAAGCACTTCATTTGCGAGGGCTGTGAGCAGCTGCTGAGCGGCCGTGCGTACATCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 90 bp | ATATTTTCCTCCACGAGTGAGGCTCGAAGCCGGAGCACATTCCCTTaGACCGCAGACAAGCCACTCCTCTTGCGGACTGCTGCTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IFSSTSEARSRSTFP*TADKPLLLRTAAGP Trigger: TGGGCCAGCAGCAGTCCGCAAGAGGAGTGGCTTGTCTGCGGTGCAAGGGAATGTGCTCCGGCTTCGAGCCTCACTCGTGGAGGAAAATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
||
| CDS-3UTR CAA 90 bp | AACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTGGCTGCCATTGGTGGTaGGGGCAGTGGTCTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NLEYALLAGRGIRPIGWLGCHWW*GQWSLC Trigger: GCACAGAGACCACTGCCCCAACCACCAATGGCAGCC...AAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CCA 90 bp | ATTCCCTTGCACCGCAGACAAGCCACTCCTCTTGCGGACTGCTGCTaGCCCAAGGACATCTTTTGCACTCCAGGGTTGAGGTCCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPLHRRQATPLADCC*PKDIFCTPGLRSLA Trigger: GGCTAAGGACCTCAACCCTGGAGTGCAAAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGGAGTGGCTTGTCTGCGGTGCAAGGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | CAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTACTGGGGCTGCTCCCTaGCAGAGCTCACAGACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QPRICTACWPWHPPHRMATGAAP*QSSQTY Trigger: ATACGTCTGTGAGCTCTGCAAGGGAGCAGCCCCAGT...AGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 90 bp | TCCTCTTATAGATGCGGATGCCGTCTCCGCCTTTCACCCTGGCGGTaGGAGTGGCATACTTGGAGTCCATCAGCAGGCGCCCAATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSYRCGCRLRLSPWR*EWHTWSPSAGAQFS Trigger: GGAAAATTGGGCGCCTGCTGATGGACTCCAAGTATGCCACTCTCACCGCCAGGGTGAAAGGCGGAGACGGCATCCGCATCTATAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 90 bp | CACATTCCCTTGCACCGCAGACAAGCCACTCCTCTTGCGGACTGCTaGTGGCCCAAGGACATCTTTTGCACTCCAGGGTTGAGGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: HIPLHRRQATPLADC*WPKDIFCTPGLRSL Trigger: TAAGGACCTCAACCCTGGAGTGCAAAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGGAGTGGCTTGTCTGCGGTGCAAGGGAATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 90 bp | CCCTGTCAGCGTAGACCACAGGGCTGTCAACTGGGGCTGCTCCCTTaGAGAGCTCACAGACGTATTCCACTTCTTTGGATGGATCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: PCQRRPQGCQLGLLP*RAHRRIPLLWMDHP Trigger: TGGGTGATCCATCCAAAGAAGTGGAATACGTCTGTGAGCTCTGCAAGGGAGCAGCCCCAGTTGACAGCCCTGTGGTCTACGCTGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 90 bp | GTATCCAGCCCTGTCAGCGTAGACCACAGGGCTGTCAACTGGGGCTaGTCCCTTGCAGAGCTCACAGACGTATTCCACTTCTTTGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSPVSVDHRAVNWG*SLAELTDVFHFFGW Trigger: CCATCCAAAGAAGTGGAATACGTCTGTGAGCTCTGCAAGGGAGCAGCCCCAGTTGACAGCCCTGTGGTCTACGCTGACAGGGCTGGATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | CTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTCAGTCTCCTGGTGGGATCTTTTGCACTCCAGGGTaGAGGTCCTTAGCCACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAGRGIRPIGWLQSPGGIFCTPG*RSLATF Trigger: AAAAGTGGCTAAGGACCTCAACCCTGGAGTGCAAAA...GATCCCACCAGGAGACTGAAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | AACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGATGGCTTGTGGGGTGCCACTGTTaGCTGTATCCAGCCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLEYALLAGRGIRPIGWLVGCHC*LYPALS Trigger: TGACAGGGCTGGATACAGCAAACAGTGGCACCCCAC...AAGCCATCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CCA 90 bp | CACAGACGTATTCCACTTCTTTGGATGGATCACCCAGGCTGCCATTaGTGGTTGGGGCAGTGGTCTCTGTGCCCTCTGGCTTTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRRIPLLWMDHPGCH*WLGQWSLCPLAFPV Trigger: CACAGGAAAAGCCAGAGGGCACAGAGACCACTGCCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATACGTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 90 bp | AGAGCTCACAGACGTATTCCACTTCTTTGGATGGATCACCCAGGCTaGCATTGGTGGTTGGGGCAGTGGTCTCTGTGCCCTCTGGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RAHRRIPLLWMDHPG*HWWLGQWSLCPLAF Trigger: AAAAGCCAGAGGGCACAGAGACCACTGCCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATACGTCTGTGAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CCA 90 bp | TTTGCTGTATCCAGCCCTGTCAGCGTAGACCACAGGGCTGTCAACTaGGGCTGCTCCCTTGCAGAGCTCACAGACGTATTCCACTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FAVSSPVSVDHRAVN*GCSLAELTDVFHFF Trigger: AAAGAAGTGGAATACGTCTGTGAGCTCTGCAAGGGAGCAGCCCCAGTTGACAGCCCTGTGGTCTACGCTGACAGGGCTGGATACAGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | CTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCCGCCCCATAGGAACGTATTCCACTTCTTaGGATGGATCACCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLNLEYALLAGRGIRPIGTYSTS*DGSPRL Trigger: CAGCCTGGGTGATCCATCCAAAGAAGTGGAATACGT...TCCTATGGGGCGGATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CCA 90 bp | GTATTCCACTTCTTTGGATGGATCACCCAGGCTGCCATTGGTGGTTaGGGCAGTGGTCTCTGTGCCCTCTGGCTTTTCCTGTGTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VFHFFGWITQAAIGG*GSGLCALWLFLCLV Trigger: AACAAGACACAGGAAAAGCCAGAGGGCACAGAGACCACTGCCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | ACTGACCCTCTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGGTGGCGATGGGGTaGGTCATGATCATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TDPLRSTTAQPRICTACWPVAMG*VMIMRF Trigger: GAACCGCATGATCATGACCAACCCCATCGCCACCGG...CCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAGAGGGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | ATTTCTCCTAGGGCTCCCTGGCAGGATACCAGTGTGTCTTTAGTTGGTTGCAGCACAGGCTGCCTCTCCTaGGGGATGAGTTCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ISPRAPWQDTSVSLVGCSTGCLS*GMSSMY Trigger: GTACATGGAACTCATCCCCAAGGAGAGGCAGCCTGT...GCTGCAACCAACTAAAGACACACTGGTATCCTGCCAGGGAGCCCTAGGAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | CTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGCCGTGGCATCAGGAGCGTTTTGACTaGCTGCATGTGGGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSTTAQPRICTACWPWHQERFD*LHVGHR Trigger: CCTGTGCCCCACATGCAGCAAGTCAAAACGCTCCTG...ATGCCACGGCCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 90 bp | TCCGATCATCGTCCAGGTCAGAGCTTAGGCAGTGCTCCTCCTGGCTaGATTTACAAGACTTGCATATTTTCCTCCACGAGTGAGGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SDHRPGQSLGSAPPG*IYKTCIFSSTSEAR Trigger: TCGAGCCTCACTCGTGGAGGAAAATATGCAAGTCTTGTAAATGCAGCCAGGAGGAGCACTGCCTAAGCTCTGACCTGGACGATGATCGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | ACTGACCCTCTAAGATCTACCACTGCTCAACCTAGAATATGCACTGCTTGCTGGGTCTTGTTTTCTTCCTaGGGCAAGCCTCCCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TDPLRSTTAQPRICTACWVLFSS*GKPPCP Trigger: AGGGCAGGGAGGCTTGCCCAAGGAAGAAAACAAGAC...CCAGCAAGCAGTGCATATTCTAGGTTGAGCAGTGGTAGATCTTAGAGGGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | GGATACCAGTGTGTCTTTAGTTGGTTGCAGCTAGGAAACAATAAATCCATTCTAGTGAGAGTGGCATACTaGGAGTCCATCAGCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GYQCVFSWLQLGNNKSILVRVAY*ESISRR Trigger: GCGCCTGCTGATGGACTCCAAGTATGCCACTCTCAC...TAGAATGGATTTATTGTTTCCTAGCTGCAACCAACTAAAGACACACTGGTATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS-3UTR CAA 90 bp | AGCATATCCTACATCTACTTCTTGATTGGATCCCTCAGAAATGCATTCTGGGAAGGCTTTTCCTGTGTCTaGTTTTCTTCCTTGGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SISYIYFLIGSLRNAFWEGFSCV*FSSLGK Trigger: CTTGCCCAAGGAAGAAAACAAGACACAGGAAAAGCC...TTCCCAGAATGCATTTCTGAGGGATCCAATCAAGAAGTAGATGTAGGATATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 72 bp | AGATGCGGATGCCGTCTCCGCCTTTCACCCTGGCGGTaGGAGTGGCATACTTGGAGTCCATCAGCAGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RCGCRLRLSPWR*EWHTWSPSAGA Trigger: GGCGCCTGCTGATGGACTCCAAGTATGCCACTCTCACCGCCAGGGTGAAAGGCGGAGACGGCATCCGCATCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 72 bp | CACGGCCGCTCAGCAGCTGCTCACAGCCCTCGCAAATaGAGTGCTTCCGATGCCAGGCCAGGTCTTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: HGRSAAAHSPRK*SASDARPGLPH Trigger: GTGTGGAAGACCTGGCCTGGCATCGGAAGCACTTCATTTGCGAGGGCTGTGAGCAGCTGCTGAGCGGCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 72 bp | ACTTGCTGCATGTGGGGCACAGGAGCTGACCCTTGGTaGCGATGTACGCACGGCCGCTCAGCAGCTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TCCMWGTGADPW*RCTHGRSAAAH Trigger: GTGAGCAGCTGCTGAGCGGCCGTGCGTACATCGTCACCAAGGGTCAGCTCCTGTGCCCCACATGCAGCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | CCGCTCAGCAGCTGCTCACAGCCCTCGCAAATGAAGTaGTTCCGATGCCAGGCCAGGTCTTCCACACGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLSSCSQPSQMK*FRCQARSSTRW Trigger: CCAGCGTGTGGAAGACCTGGCCTGGCATCGGAAGCACTTCATTTGCGAGGGCTGTGAGCAGCTGCTGAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 72 bp | GAGCGTTTTGACTTGCTGCATGTGGGGCACAGGAGCTaGCCCTTGGTGACGATGTACGCACGGCCGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ERFDLLHVGHRS*PLVTMYARPLS Trigger: GCTGAGCGGCCGTGCGTACATCGTCACCAAGGGTCAGCTCCTGTGCCCCACATGCAGCAAGTCAAAACGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | CCCTTGCACCGCAGACAAGCCACTCCTCTTGCGGACTaGTGCTGGCCCAAGGACATCTTTTGCACTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLHRRQATPLAD*CWPKDIFCTPG Trigger: CCCTGGAGTGCAAAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGGAGTGGCTTGTCTGCGGTGCAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | TCCACGAGTGAGGCTCGAAGCCGGAGCACATTCCCTTaGACCGCAGACAAGCCACTCCTCTTGCGGACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: STSEARSRSTFP*TADKPLLLRTA Trigger: AGCAGTCCGCAAGAGGAGTGGCTTGTCTGCGGTGCAAGGGAATGTGCTCCGGCTTCGAGCCTCACTCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | CCCTTGGTGACGATGTACGCACGGCCGCTCAGCAGCTaGTCACAGCCCTCGCAAATGAAGTGCTTCCGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PLVTMYARPLSS*SQPSQMKCFRC Trigger: GCATCGGAAGCACTTCATTTGCGAGGGCTGTGAGCAGCTGCTGAGCGGCCGTGCGTACATCGTCACCAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 90 bp | CGAAGCCGGAGCACATTCCCTTGCACCGCAGACAAGCCACTCCTCTaGCGGACTGCTGCTGGCCCAAGGACATCTTTTGCACTCCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSRSTFPCTADKPLL*RTAAGPRTSFALQG Trigger: ACCCTGGAGTGCAAAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGGAGTGGCTTGTCTGCGGTGCAAGGGAATGTGCTCCGGCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 90 bp | CGGATGCCGTCTCCGCCTTTCACCCTGGCGGTGAGAGTGGCATACTaGGAGTCCATCAGCAGGCGCCCAATTTTCCGATCATCGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RMPSPPFTLAVRVAY*ESISRRPIFRSSSR Trigger: CCTGGACGATGATCGGAAAATTGGGCGCCTGCTGATGGACTCCAAGTATGCCACTCTCACCGCCAGGGTGAAAGGCGGAGACGGCATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | CCGCACACTCTCACAGTAGTGGCGGCCACACCAGGGTaGACCATCCTTCCAGAAGTAGATGAGGTCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHTLTVVAATPG*TILPEVDEVHQ Trigger: CTGGTGGACCTCATCTACTTCTGGAAGGATGGTGCACCCTGGTGTGGCCGCCACTACTGTGAGAGTGTGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 72 bp | AGGGCACCCTCAGTGCCTGTCACAGGCTGCCTCTCCTaGGGGATGAGTTCCATGTACTGCAGGCCCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RAPSVPVTGCLS*GMSSMYCRPSF Trigger: GAAACTGGGCCTGCAGTACATGGAACTCATCCCCAAGGAGAGGCAGCCTGTGACAGGCACTGAGGGTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | CCTGTCAGCGTAGACCACAGGGCTGTCAACTGGGGCTaGTCCCTTGCAGAGCTCACAGACGTATTCCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: PVSVDHRAVNWG*SLAELTDVFHF Trigger: GAAGTGGAATACGTCTGTGAGCTCTGCAAGGGAGCAGCCCCAGTTGACAGCCCTGTGGTCTACGCTGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS TCA 72 bp | AGGTGGGGTCTTTGCCGGTGGCGATGGGGTTGGTCATaGTCATGCGGTTCCTCTTATAGATGCGGATGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RWGLCRWRWGWS*SCGSSYRCGCR Trigger: ACGGCATCCGCATCTATAAGAGGAACCGCATGATCATGACCAACCCCATCGCCACCGGCAAAGACCCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | CCTCTTGCGGACTGCTGCTGGCCCAAGGACATCTTTTaGACTCCAGGGTTGAGGTCCTTAGCCACTTTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLADCCWPKDIF*TPGLRSLATFA Trigger: GGCAAAAGTGGCTAAGGACCTCAACCCTGGAGTGCAAAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
||
| CDS CCA 72 bp | TTCTTTGGATGGATCACCCAGGCTGCCATTGGTGGTTaGGGCAGTGGTCTCTGTGCCCTCTGGCTTTTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FFGWITQAAIGG*GSGLCALWLFL Trigger: CAGGAAAAGCCAGAGGGCACAGAGACCACTGCCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 72 bp | AGCACATTCCCTTGCACCGCAGACAAGCCACTCCTCTaGCGGACTGCTGCTGGCCCAAGGACATCTTTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: STFPCTADKPLL*RTAAGPRTSFA Trigger: TGCAAAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGGAGTGGCTTGTCTGCGGTGCAAGGGAATGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 72 bp | TCTCCGCCTTTCACCCTGGCGGTGAGAGTGGCATACTaGGAGTCCATCAGCAGGCGCCCAATTTTCCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: SPPFTLAVRVAY*ESISRRPIFRS Trigger: TGATCGGAAAATTGGGCGCCTGCTGATGGACTCCAAGTATGCCACTCTCACCGCCAGGGTGAAAGGCGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 72 bp | TATTCCACTTCTTTGGATGGATCACCCAGGCTGCCATaGGTGGTTGGGGCAGTGGTCTCTGTGCCCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: YSTSLDGSPRLP*VVGAVVSVPSG Trigger: GCCAGAGGGCACAGAGACCACTGCCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | AGACGTATTCCACTTCTTTGGATGGATCACCCAGGCTaGCATTGGTGGTTGGGGCAGTGGTCTCTGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RRIPLLWMDHPG*HWWLGQWSLCP Trigger: AGGGCACAGAGACCACTGCCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATACGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CCA 72 bp | CTCCCTTGCAGAGCTCACAGACGTATTCCACTTCTTTaGATGGATCACCCAGGCTGCCATTGGTGGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LPCRAHRRIPLL*MDHPGCHWWLG Trigger: CCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATACGTCTGTGAGCTCTGCAAGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 72 bp | TCCTCTTGCGGACTGCTGCTGGCCCAAGGACATCTTTaGCACTCCAGGGTTGAGGTCCTTAGCCACTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSCGLLLAQGHL*HSRVEVLSHFC Trigger: GCAAAAGTGGCTAAGGACCTCAACCCTGGAGTGCAAAAGATGTCCTTGGGCCAGCAGCAGTCCGCAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 72 bp | GCTCCCTTGCAGAGCTCACAGACGTATTCCACTTCTTaGGATGGATCACCCAGGCTGCCATTGGTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: APLQSSQTYSTS*DGSPRLPLVVG Trigger: CCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATACGTCTGTGAGCTCTGCAAGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS CAA 90 bp | TCACAGACGTATTCCACTTCTTTGGATGGATCACCCAGGCTGCCATaGGTGGTTGGGGCAGTGGTCTCTGTGCCCTCTGGCTTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SQTYSTSLDGSPRLP*VVGAVVSVPSGFSC Trigger: ACAGGAAAAGCCAGAGGGCACAGAGACCACTGCCCCAACCACCAATGGCAGCCTGGGTGATCCATCCAAAGAAGTGGAATACGTCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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| CDS GCA 72 bp | CGTCCAGGTCAGAGCTTAGGCAGTGCTCCTCCTGGCTaGATTTACAAGACTTGCATATTTTCCTCCACGAGT | + |
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Preference number: 6 (lower is better) Translates to: RPGQSLGSAPPG*IYKTCIFSSTS Trigger: ACTCGTGGAGGAAAATATGCAAGTCTTGTAAATGCAGCCAGGAGGAGCACTGCCTAAGCTCTGACCTGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032376.6 |
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