Pregenerated sensors for LMBRD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039704Ensembl transcript IDs: ENSMUST00000090380.6, ENSMUST00000227556.3
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCAAAGTACTAGGGGAGGGAGGGAGGGAAGGAGGGAGGGAGGAGTaGGGAGGGAGGAGGGGAGGGACGGAAAGCAAGGGCACAAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: FKVLGEGGREGGREE*GGRRGGTESKGTRA Trigger: TGCCCTTGTGCCCTTGCTTTCCGTCCCTCCCCTCCTCCCTCCTCACTCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCCTAGTACTTTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 90 bp | GAGAATTGGGGCTGGAGAGAGAGCTCAGAGGTTAAAAGCATTGACTaGTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAACCACATGGT | + |
|
Preference number: 1 (lower is better) Translates to: ENWGWRESSEVKSID*SSKGPEFNSQQPHG Trigger: ACCATGTGGTTGCTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGAGCTCTCTCTCCAGCCCCAATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR TCA 90 bp | CACACAGTGTACACTTCTGCTAGTGTCACCCTAAGGGGAAGGGCCTaGACCCCTTTGCATATTCCTATCATTCTGTCTCAGAGCATTATA | + |
|
Preference number: 1 (lower is better) Translates to: HTVYTSASVTLRGRA*TPLHIPIILSQSII Trigger: TATAATGCTCTGAGACAGAATGATAGGAATATGCAAAGGGGTTCAGGCCCTTCCCCTTAGGGTGACACTAGCAGAAGTGTACACTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 90 bp | TTATCAACTGTGTACATAAACAAAAGAGAAAAGCCTATCAGCACATaGAAGCCATGTTGTAAAGGGAGGTGGGAGGGTGGTGGGAGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: LSTVYINKREKPIST*KPCCKGRWEGGGRE Trigger: CTCCCTCCCACCACCCTCCCACCTCCCTTTACAACATGGCTTTCATGTGCTGATAGGCTTTTCTCTTTTGTTTATGTACACAGTTGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 90 bp | CAAATGCTGTGCACTTTAATAGGCTGTGGATTTGCCTTACATGTCTaGCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACAAC | + |
|
Preference number: 1 (lower is better) Translates to: QMLCTLIGCGFALHV*HSQPLPIFFCIKHN Trigger: GTTGTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGCAAATCCACAGCCTATTAAAGTGCACAGCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 90 bp | ACCTCTCAGCTTTTAACGTCCAGTACTGTACAGTCCACTGCACTTTaGAATGCAAGTGTGTATAATTCCTTAGGGACATGTTTTGTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: TSQLLTSSTVQSTAL*NASVYNSLGTCFVS Trigger: AGAGACAAAACATGTCCCTAAGGAATTATACACACTTGCATTTCAAAGTGCAGTGGACTGTACAGTACTGGACGTTAAAAGCTGAGAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 90 bp | TGCCAAACCTGCCTGGGCTTCCAAGTCTCTAGCAACAAAAGCCACTaGTTTGGAAGTACTATCCAAAAAGAAATCAAATTTCACTCTTCT | + |
|
Preference number: 1 (lower is better) Translates to: CQTCLGFQVSSNKSH*FGSTIQKEIKFHSS Trigger: AGAAGAGTGAAATTTGATTTCTTTTTGGATAGTACTTCCAAATCAGTGGCTTTTGTTGCTAGAGACTTGGAAGCCCAGGCAGGTTTGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 90 bp | ATAATACCAAATGCAAATGCTGTGCACTTTAATAGGCTGTGGATTTaGCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTG | + |
|
Preference number: 1 (lower is better) Translates to: IIPNANAVHFNRLWI*LTCLPQSATPNILL Trigger: CAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGCAAATCCACAGCCTATTAAAGTGCACAGCATTTGCATTTGGTATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 90 bp | AGGCAACTGAATTATATGAAGGCAAAAGACCAAGCTCCTTATCAATaGAATGTGGAAATCAGGCTTCTGGTATGCTTTTCTTGGGTACTG | + |
|
Preference number: 1 (lower is better) Translates to: RQLNYMKAKDQAPYQ*NVEIRLLVCFSWVL Trigger: CAGTACCCAAGAAAAGCATACCAGAAGCCTGATTTCCACATTGCATTGATAAGGAGCTTGGTCTTTTGCCTTCATATAATTCAGTTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 90 bp | CTGAAAGGTTCCGTGATCTGCCTAAGTTATTCCAGAAACCAATCATaGAATTATAAGCAGCATTCCATTATCACTGTTCTGGTCAACTGC | + |
|
Preference number: 1 (lower is better) Translates to: LKGSVICLSYSRNQS*NYKQHSIITVLVNC Trigger: GCAGTTGACCAGAACAGTGATAATGGAATGCTGCTTATAATTTCATGATTGGTTTCTGGAATAACTTAGGCAGATCACGGAACCTTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 90 bp | TTAAATTATAGCAAGACCTCACCTGATCTCCACCCAGAAATCATTTaGGAATGGAACTTTGTTATTGTTACAGTGGCTAATATGGAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LNYSKTSPDLHPEII*EWNFVIVTVANMEG Trigger: TCCTTCCATATTAGCCACTGTAACAATAACAAAGTTCCATTCTCAAATGATTTCTGGGTGGAGATCAGGTGAGGTCTTGCTATAATTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 90 bp | CTACCCACACTCGATTTGAACATATTTTATGCTTACATGTTACATTaGACAATTGAAATTGTAAAGGCCAGATACATATCAACCAGCAAC | + |
|
Preference number: 1 (lower is better) Translates to: LPTLDLNIFYAYMLH*TIEIVKARYISTSN Trigger: GTTGCTGGTTGATATGTATCTGGCCTTTACAATTTCAATTGTCCAATGTAACATGTAAGCATAAAATATGTTCAAATCGAGTGTGGGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACTATGGTTGCAGCACTTaGGAGGTGGAGGGGGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHYGCST*EVEGDQ Trigger: CTGATCCCCCTCCACCTCCCAAGTGCTGCAACCATA...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCAAAGACCCTTTCTGTGATAACCATCCGTGTCCCTTCAAAGTACTAGGGGAGGCACAGCAGACAACTTaGTTCCTCTTTCTTAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: LKDPFCDNHPCPFKVLGEAQQTT*FLFLNP Trigger: GGGGTTAAGAAAGAGGAAGCAAGTTGTCTGCTGTGC...CTCCCCTAGTACTTTGAAGGGACACGGATGGTTATCACAGAAAGGGTCTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACCTCTTCTGGTGTGTCTaGAAACAGCTACTGTGTACT | + |
|
Preference number: 2 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHLFWCV*KQLLCT Trigger: AGTACACAGTAGCTGTTTCCAGACACACCAGAAGAG...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR TCA 90 bp | GGTGAGAAACTGCCCTGGACAAGTTCAAGTCTGACCACCCCATGTAGAACGTATTTACCATTCAATAGCTaGACAGCCAGATGTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GEKLPWTSSSLTTPCRTYLPFNS*TARCFL Trigger: AAGAAAACATCTGGCTGTTCAGCTATTGAATGGTAA...ATACGTTCTACATGGGGTGGTCAGACTTGAACTTGTCCAGGGCAGTTTCTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACTCAATGCTTTCAGCTTaGAACCACTGCCTTCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHSMLSA*NHCLLN Trigger: GTTTAGAAGGCAGTGGTTTCAAGCTGAAAGCATTGA...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTTTCCTTTTTGGACACTGTGGACTGTTGGATCTGATGGGTTTTTATGATGGGTCTGATGTCCTCTTCTaGTGTGTCTGGAAACAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PFLFGHCGLLDLMGFYDGSDVLF*CVWKQL Trigger: TAGCTGTTTCCAGACACACCAGAAGAGGACATCAGA...CCCATCATAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CCA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGCCAGCAACCACATGGTaGCTCACATCCATCTGTAAA | + |
|
Preference number: 2 (lower is better) Translates to: YHSIAEQPDVFFTRSINRPATTW*LTSICK Trigger: TTTACAGATGGATGTGAGCCACCATGTGGTTGCTGG...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTAAACTCAAGTTTACGCAGCAAAGTAACTTTTCTATATGGTTGGGGACAAGGTGAGAAACTGCCCTaGACAAGTTCAAGTCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: LLNSSLRSKVTFLYGWGQGEKLP*TSSSLT Trigger: GGTCAGACTTGAACTTGTCCAGGGCAGTTTCTCACC...TTGTCCCCAACCATATAGAAAAGTTACTTTGCTGCGTAAACTTGAGTTTAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGATGTTCATAAAGGCTaGGCTCATGTGTTGACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTDVHKG*AHVLTL Trigger: CAAGGTCAACACATGAGCTCAGCCTTTATGAACATC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR CAA 90 bp | AAACCTGCCTGGGCTTCCAAGTCTCTAGCAACAAAAGCCACTGATTaGGAAGTACTATCCAAAAAGAAATCAAATTTCACTCTTCTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KPAWASKSLATKATD*EVLSKKKSNFTLLA Trigger: TGCAAGAAGAGTGAAATTTGATTTCTTTTTGGATAGTACTTCCAAATCAGTGGCTTTTGTTGCTAGAGACTTGGAAGCCCAGGCAGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCAAGTCTCTAGCAACAAAAGCCACTGATTTGGAAGTACTATCCAAAAAGAAATTTAAAAACACACAGTaGCGTTCCTACCCACACTCG | + |
|
Preference number: 2 (lower is better) Translates to: SKSLATKATDLEVLSKKKFKNTQ*RSYPHS Trigger: CGAGTGTGGGTAGGAACGTCACTGTGTGTTTTTAAA...TTTCTTTTTGGATAGTACTTCCAAATCAGTGGCTTTTGTTGCTAGAGACTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAATGGCGAGTCACTATTTCACCTTCAGACAAACTAGTTCATTTTGCTTTAGGAGCACTTGTAATAACTaGAGGGGAACAGGTGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: QMASHYFTFRQTSSFCFRSTCNN*RGTGEK Trigger: TTTCTCACCTGTTCCCCTGCAGTTATTACAAGTGCT...CCTAAAGCAAAATGAACTAGTTTGTCTGAAGGTGAAATAGTGACTCGCCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTCTAAACTCAAGTTTACGCAGCAAAGTAACTTTTCTATATGGTTGGGGACAATCCAGAAACCAATCATaGAATTATAAGCAGCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLNSSLRSKVTFLYGWGQSRNQS*NYKQHS Trigger: GGAATGCTGCTTATAATTTCATGATTGGTTTCTGGA...TTGTCCCCAACCATATAGAAAAGTTACTTTGCTGCGTAAACTTGAGTTTAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCAGAAACCAATCATGAAATTATAAGCAGCATTCCATTATCACTGTTCTGGATGATCGGTTTTCAATaGTGTTTTTGTTATCCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: IPETNHEIISSIPLSLFWMIGFQ*CFCYPH Trigger: GTGAGGATAACAAAAACAGCATTGAAAACCGATCAT...CCAGAACAGTGATAATGGAATGCTGCTTATAATTTCATGATTGGTTTCTGGAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | CAGGAGAAAGGAGGGCAGGAGGATGGCTCACAGGGCTaGGACCCAGAAATGGTGCCAAACCTGCCTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QEKGGQEDGSQG*DPEMVPNLPGL Trigger: AAGCCCAGGCAGGTTTGGCACCATTTCTGGGTCTCAGCCCTGTGAGCCATCCTCCTGCCCTCCTTTCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | GGCAGGAGGATGGCTCACAGGGCTGAGACCCAGAAATaGTGCCAAACCTGCCTGGGCTTCCAAGTCTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRRMAHRAETQK*CQTCLGFQVSS Trigger: GCTAGAGACTTGGAAGCCCAGGCAGGTTTGGCACCATTTCTGGGTCTCAGCCCTGTGAGCCATCCTCCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | CTGTGGCGCATTTCTATGGTTGCAGCACTTGGGAGGTaGAGGGGGATCAGGACTTCAGGGCCATCCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LWRISMVAALGR*RGIRTSGPSSA Trigger: AGCTGAGGATGGCCCTGAAGTCCTGATCCCCCTCCACCTCCCAAGTGCTGCAACCATAGAAATGCGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | CATGGTGCTGTGGCGCATTTCTATGGTTGCAGCACTTaGGAGGTGGAGGGGGATCAGGACTTCAGGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: HGAVAHFYGCST*EVEGDQDFRAI Trigger: GATGGCCCTGAAGTCCTGATCCCCCTCCACCTCCCAAGTGCTGCAACCATAGAAATGCGCCACAGCACCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 72 bp | GCTCACAGGGCTGAGACCCAGAAATGGTGCCAAACCTaGCTGGGCTTCCAAGTCTCTAGCAACAAAAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: AHRAETQKWCQT*LGFQVSSNKSH Trigger: GTGGCTTTTGTTGCTAGAGACTTGGAAGCCCAGGCAGGTTTGGCACCATTTCTGGGTCTCAGCCCTGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACATCCATCTGTAAAGGGGTCTaGTGTCCTCTTCTGGTGTGTCTGGAAACAGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTSICKGV*CPLLVCLETAT Trigger: AGTAGCTGTTTCCAGACACACCAGAAGAGGACATCAGACCCCTTTACAGATGGATGTGAGCCACCATGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | TGTAATAACTGCAGGGGAACAGGTGAGAAACTGCCCTaGACAAGTTCAAGTCTGACCACCCCATGTAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: CNNCRGTGEKLP*TSSSLTTPCRT Trigger: CGTTCTACATGGGGTGGTCAGACTTGAACTTGTCCAGGGCAGTTTCTCACCTGTTCCCCTGCAGTTATTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | TACACTTCTGCTAGTGTCACCCTAAGGGGAAGGGCCTaGACCCCTTTGCATATTCCTATCATTCTGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: YTSASVTLRGRA*TPLHIPIILSQ Trigger: CTGAGACAGAATGATAGGAATATGCAAAGGGGTTCAGGCCCTTCCCCTTAGGGTGACACTAGCAGAAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | GAAAGAACTCAAACCTACAGAGAGCTGCAGTCTTTGTaGGGCATCTGCACACAGTGTACACTTCTGCTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ERTQTYRELQSL*GICTQCTLLLV Trigger: CACTAGCAGAAGTGTACACTGTGTGCAGATGCCTCACAAAGACTGCAGCTCTCTGTAGGTTTGAGTTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACCAGAGGTTAAAAGCATaGACTGCTCTTCCAAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHQRLKA*TALPKV Trigger: GACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTG...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGTCTCTAGCAACAAAAGCCACTGATTTGGAAGTACTATCCAAAAAGAAAAAATCCACCTGCCTCTaGCCTCCCAAGGGCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SKSLATKATDLEVLSKKKKSTCL*PPKGWD Trigger: ATCCCAGCCCTTGGGAGGCAAGAGGCAGGTGGATTT...TTTCTTTTTGGATAGTACTTCCAAATCAGTGGCTTTTGTTGCTAGAGACTTGGA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 72 bp | AATGCAAATGCTGTGCACTTTAATAGGCTGTGGATTTaGCTTACATGTCTGCCACAGTCAGCCACTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: NANAVHFNRLWI*LTCLPQSATPN Trigger: ATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGCAAATCCACAGCCTATTAAAGTGCACAGCATTTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | GTGTACATAAACAAAAGAGAAAAGCCTATCAGCACATaGAAGCCATGTTGTAAAGGGAGGTGGGAGGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: VYINKREKPIST*KPCCKGRWEGG Trigger: ACCACCCTCCCACCTCCCTTTACAACATGGCTTTCATGTGCTGATAGGCTTTTCTCTTTTGTTTATGTACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 72 bp | TGCACTTTAATAGGCTGTGGATTTGCCTTACATGTCTaGCACAGTCAGCCACTCCCAATATTCTTTTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: CTLIGCGFALHV*HSQPLPIFFCI Trigger: GATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGCAAATCCACAGCCTATTAAAGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | TCACATCCATCTGTAAAGGGGTCTGATGTCCTCTTCTaGTGTGTCTGGAAACAGCTACTGTGTACTTATGTA | + |
|
Preference number: 3 (lower is better) Translates to: SHPSVKGSDVLF*CVWKQLLCTYV Trigger: TACATAAGTACACAGTAGCTGTTTCCAGACACACCAGAAGAGGACATCAGACCCCTTTACAGATGGATGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | ATACCAAATGCAAATGCTGTGCACTTTAATAGGCTGTaGATTTGCCTTACATGTCTGCCACAGTCAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: IPNANAVHFNRL*ICLTCLPQSAT Trigger: AGTGGCTGACTGTGGCAGACATGTAAGGCAAATCCACAGCCTATTAAAGTGCACAGCATTTGCATTTGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTTCCTTTTTGGACACTGTGGACTGTTGGATCTGATGGGTTTTTATGATGGGCTAAGCCATGTTCATTaGGGAATAAAACACTGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PFLFGHCGLLDLMGFYDGLSHVH*GIKHWL Trigger: GAGCCAGTGTTTTATTCCCAAATGAACATGGCTTAG...CCCATCATAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | AGGCCAGATACATATCAACCAGCAACCTTTCCTTTTTaGACACTGTGGACTGTTGGATCTGATGGGTTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RPDTYQPATFPF*TLWTVGSDGFL Trigger: TAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGGTTGCTGGTTGATATGTATCTGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | GGCACAAAGATGTTCATAAAGGCTGAGCTCATGTGTTaGCCTTGGTTACTTGATCCAAGAATTACTTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GTKMFIKAELMC*PWLLDPRITSD Trigger: GTCTGAAGTAATTCTTGGATCAAGTAACCAAGGTCAACACATGAGCTCAGCCTTTATGAACATCTTTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | GCAGTGTCCTCTTTAGTAACATCAAAGAAAACGCACTaGGCTAGTATGCACTGTGCTTCTATTCAGACATTG | + |
|
Preference number: 3 (lower is better) Translates to: AVSSLVTSKKTH*ASMHCASIQTL Trigger: CAATGTCTGAATAGAAGCACAGTGCATACTAGCTCAGTGCGTTTTCTTTGATGTTACTAAAGAGGACACTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR-3UTR CAA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGTTAAATATTAGAGAATaGGGGCTGGAGAGAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: YHSIAEQPDVFFTRSINRLNIRE*GLEREL Trigger: GAGCTCTCTCTCCAGCCCCAATTCTCTAATATTTAA...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | CTTAATTCCTCAGCAATAAAGTCAATGCTTTCAGCTTaGAACCACTGCCTTCTAAACTCAAGTTTACGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LNSSAIKSMLSA*NHCLLNSSLRS Trigger: GCTGCGTAAACTTGAGTTTAGAAGGCAGTGGTTTCAAGCTGAAAGCATTGACTTTATTGCTGAGGAATTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | CTTTTAACGTCCAGTACTGTACAGTCCACTGCACTTTaGAATGCAAGTGTGTATAATTCCTTAGGGACATGT | + |
|
Preference number: 3 (lower is better) Translates to: LLTSSTVQSTAL*NASVYNSLGTC Trigger: ACATGTCCCTAAGGAATTATACACACTTGCATTTCAAAGTGCAGTGGACTGTACAGTACTGGACGTTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 72 bp | TTCCATTATCACTGTTCTGGTCAACTGCTCTCTGACTaGATTCACAGTAAAAGGTTATATGCAAATGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: FHYHCSGQLLSD*IHSKRLYANVS Trigger: GGACACATTTGCATATAACCTTTTACTGTGAATGCAGTCAGAGAGCAGTTGACCAGAACAGTGATAATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | AAGCTCCTTATCAATGCAATGTGGAAATCAGGCTTCTaGTATGCTTTTCTTGGGTACTGGTGTATGTACATA | + |
|
Preference number: 3 (lower is better) Translates to: KLLINAMWKSGF*YAFLGYWCMYI Trigger: TATGTACATACACCAGTACCCAAGAAAAGCATACCAGAAGCCTGATTTCCACATTGCATTGATAAGGAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | TGCCTGGGCTTCCAAGTCTCTAGCAACAAAAGCCACTaGTTTGGAAGTACTATCCAAAAAGAAATCAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: CLGFQVSSNKSH*FGSTIQKEIKF Trigger: AAATTTGATTTCTTTTTGGATAGTACTTCCAAATCAGTGGCTTTTGTTGCTAGAGACTTGGAAGCCCAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR GCA 72 bp | CCTTATCAATGCAATGTGGAAATCAGGCTTCTGGTATaGTTTTCTTGGGTACTGGTGTATGTACATATACAT | + |
|
Preference number: 3 (lower is better) Translates to: PYQCNVEIRLLV*FSWVLVYVHIH Trigger: ATGTATATGTACATACACCAGTACCCAAGAAAAGCATACCAGAAGCCTGATTTCCACATTGCATTGATAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CCA 72 bp | TCTGTAAAGGGGTCTGATGTCCTCTTCTGGTGTGTCTaGAAACAGCTACTGTGTACTTATGTAAATAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SVKGSDVLFWCV*KQLLCTYVNKI Trigger: TATTTTATTTACATAAGTACACAGTAGCTGTTTCCAGACACACCAGAAGAGGACATCAGACCCCTTTACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGTCTCTAGCAACAAAAGCCACTGATTTGGAAGTACTATCCAAAAAGAAAGCTTCTATTCAGACATaGTTCACTAGTCTAGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SKSLATKATDLEVLSKKKASIQT*FTSLAK Trigger: TTTTGCTAGACTAGTGAACAATGTCTGAATAGAAGC...TTTCTTTTTGGATAGTACTTCCAAATCAGTGGCTTTTGTTGCTAGAGACTTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR TCA 72 bp | CATGCACAATCAATCCCACGTAAGTGTATACAAATCTaGAGAAGAGCTGTTTACATTCAGTTATGTCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HAQSIPRKCIQI*RRAVYIQLCLN Trigger: ATTCAGACATAACTGAATGTAAACAGCTCTTCTTCAGATTTGTATACACTTACGTGGGATTGATTGTGCATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR CAA 72 bp | TCATGGTGCTGTGGCGCATTTCTATGGTTGCAGCACTaGGGAGGTGGAGGGGGATCAGGACTTCAGGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWCCGAFLWLQH*GGGGGSGLQGH Trigger: ATGGCCCTGAAGTCCTGATCCCCCTCCACCTCCCAAGTGCTGCAACCATAGAAATGCGCCACAGCACCATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGACCCTTTCTGTGATAACCATCCGTGTCCCTTCAAAGTACTAGGGGAGACAGCAAGGGTCCTGTaGAACCATGGACGCAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKDPFCDNHPCPFKVLGETARVL*NHGRKR Trigger: CCTTTTGCGTCCATGGTTTCACAGGACCCTTGCTGT...CTCCCCTAGTACTTTGAAGGGACACGGATGGTTATCACAGAAAGGGTCTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAAACTGCCCTGGACAAGTTCAAGTCTGACCACCCCATGTAGAACGTATTCTTTGGGGTCAGGATaGACGTTTCTGTTCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GEKLPWTSSSLTTPCRTYSLGSG*TFLFRV Trigger: CACTCGGAACAGAAACGTCCATCCTGACCCCAAAGA...ATACGTTCTACATGGGGTGGTCAGACTTGAACTTGTCCAGGGCAGTTTCTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CAA 72 bp | ATTGGGGCTGGAGAGAGAGCTCAGAGGTTAAAAGCATaGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IGAGERAQRLKA*TALPKVLSSIP Trigger: GGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGAGCTCTCTCTCCAGCCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACGGCTTGAAACATGGATaGTGTCTTGGAGCTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHGLKHG*CLGAGV Trigger: CACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCC...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACGGTCCTGTGAAACCATaGACGCAAAAGGCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHGPVKP*TQKAFP Trigger: TGGGAATGCCTTTTGCGTCCATGGTTTCACAGGACC...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGGTCTTGGAGCTGGAGTaGCAGATGCATCCAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YHSIAEQPDVFFTRSINRVLELE*QMHPVP Trigger: CGGGACTGGATGCATCTGTCACTCCAGCTCCAAGAC...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CCTTTCCTTTTTGGACACTGTGGACTGTTGGATCTGATGGGTTTTTATGATGGGCTGGTGGGAGATGGATaGATCCATATGGGTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PFLFGHCGLLDLMGFYDGLVGDG*IHMGQS Trigger: GGATTGACCCATATGGATTCATCCATCTCCCACCAG...CCCATCATAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGAGCTGGAGTGACAGATaGATCCAGTCCCGTAACGTT | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQSWSDR*IQSRNV Trigger: AACGTTACGGGACTGGATGCATCTGTCACTCCAGCT...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGGGCTCCATTCCAGTATaGCCGAGGAATTTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKGSIPV*PRNFHQ Trigger: TTGGTGGAAATTCCTCGGTCATACTGGAATGGAGCC...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | GGTGAGAAACTGCCCTGGACAAGTTCAAGTCTGACCACCCCATGTAGAACGTATACGGTGCCTTTGAACTaGATAAATCACCTGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: GEKLPWTSSSLTTPCRTYTVPLN*INHLFM Trigger: CATAAACAGGTGATTTATTCAGTTCAAAGGCACCGT...ATACGTTCTACATGGGGTGGTCAGACTTGAACTTGTCCAGGGCAGTTTCTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGAGGTTGATACCTTCCTaGCTCAGGTTCCAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQRLIPS*LRFQRF Trigger: GAATCTCTGGAACCTGAGTCAGGAAGGTATCAACCT...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CTCAAAGACCCTTTCTGTGATAACCATCCGTGTCCCTTCAAAGTACTAGGGGAGAAAGAAGGTACACTCTaGCCACACAACAATCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKDPFCDNHPCPFKVLGEKEGTL*PHNNHR Trigger: TCTGTGATTGTTGTGTGGTCAGAGTGTACCTTCTTT...CTCCCCTAGTACTTTGAAGGGACACGGATGGTTATCACAGAAAGGGTCTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTAGGAGGGCTGGAATTTaGAGCAGCATGCCTGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTRRAGI*SSMPAS Trigger: CGATGCAGGCATGCTGCTGCAAATTCCAGCCCTCCT...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CTCAAAGACCCTTTCTGTGATAACCATCCGTGTCCCTTCAAAGTACTAGGGGAGTTATCTCCCATGAACTaGTGGAAACCAAGCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LKDPFCDNHPCPFKVLGELSPMN*WKPSRF Trigger: GAATCTGCTTGGTTTCCAGCAGTTCATGGGAGATAA...CTCCCCTAGTACTTTGAAGGGACACGGATGGTTATCACAGAAAGGGTCTTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTATTTTCAGGAGGGCTaGAATTTGCAGCAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQYFQEG*NLQQHA Trigger: GGCATGCTGCTGCAAATTCCAGCCCTCCTGAAAATA...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACTACACACTTCCTCAGTaGGTGGTTGTACTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHYTLPQ*VVVLDA Trigger: AGCATCAAGTACAACCACCCACTGAGGAAGTGTGTA...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGGGCTGGGTATTCTGGTaGGAGATGGATGAATCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQGWVFW*EMDESI Trigger: TATGGATTCATCCATCTCCCACCAGAATACCCAGCC...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGGTATATGCAGTTGGCTaGGTATTCTGGTGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQVYAVG*VFWWEM Trigger: CATCTCCCACCAGAATACCCAGCCAACTGCATATAC...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGTCTTTGGGGTCAGGATaGACGTTTCTGTTCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKSLGSG*TFLFRV Trigger: CACTCGGAACAGAAACGTCCATCCTGACCCCAAAGA...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGAGAGGCTCAGCATCCTaGAGAAGTTCTATTCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQRGSAS*RSSIRS Trigger: AGACCGAATAGAACTTCTCCAGGATGCTGAGCCTCT...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCAGAAACCAATCATGAAATTATAAGCAGCATTCCATTATCACTGTTCTGGGTCTTGGAGCTGGAGTaGCAGATGCATCCAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IPETNHEIISSIPLSLFWVLELE*QMHPVP Trigger: CGGGACTGGATGCATCTGTCACTCCAGCTCCAAGAC...CCAGAACAGTGATAATGGAATGCTGCTTATAATTTCATGATTGGTTTCTGGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CCTTTCCTTTTTGGACACTGTGGACTGTTGGATCTGATGGGTTTTTATGATGGGTTGCAGCAGCATGCCTaGATCGGTTATATATTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PFLFGHCGLLDLMGFYDGLQQHA*IGYILS Trigger: CGACAATATATAACCGATGCAGGCATGCTGCTGCAA...CCCATCATAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | GGTGAGAAACTGCCCTGGACAAGTTCAAGTCTGACCACCCCATGTAGAACGTATTGTCATCAGTTTGGCTaGCTTAAAGTAAGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEKLPWTSSSLTTPCRTYCHQFG*LKVSLH Trigger: ATGAAGACTTACTTTAAGGCAGCCAAACTGATGACA...ATACGTTCTACATGGGGTGGTCAGACTTGAACTTGTCCAGGGCAGTTTCTCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | CCTTTCCTTTTTGGACACTGTGGACTGTTGGATCTGATGGGTTTTTATGATGGGGAAGATAACCCCTTTTaGCTCCATTCCAGTATGACC | + |
|
Preference number: 4 (lower is better) Translates to: PFLFGHCGLLDLMGFYDGEDNPF*LHSSMT Trigger: GGTCATACTGGAATGGAGCCAAAAGGGGTTATCTTC...CCCATCATAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACAGAAATTTGACTCTTTaGGGTCAGGATGGACGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHRNLTL*GQDGRF Trigger: GAAACGTCCATCCTGACCCCAAAGAGTCAAATTTCT...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGGCTCCATTCCAGTATaGCCGAGGAATTTCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTGSIPV*PRNFHQ Trigger: TTGGTGGAAATTCCTCGGTCATACTGGAATGGAGCC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGATTTTCTGGCTCAGGTaGCTGAAAGGTGTGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQIFWLR*LKGVNK Trigger: TTTGTTCACACCTTTCAGTCACCTGAGCCAGAAAAT...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CCTTTCCTTTTTGGACACTGTGGACTGTTGGATCTGATGGGTTTTTATGATGGGTATCATTATCTCCCATaGACTGCTGGAAACCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFLFGHCGLLDLMGFYDGYHYLP*TAGNQA Trigger: TGCTTGGTTTCCAGCAGTTCATGGGAGATAATGATA...CCCATCATAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | GCCTTACATGTCTGCCACAGTCAGCCACTCCCAATATTCTTTTGCATCAAACACTTTCTGCCAGCTGTATaGATACTGCAAAAAGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: ALHVCHSQPLPIFFCIKHFLPAV*ILQKGI Trigger: TATCCCTTTTTGCAGTATTCATACAGCTGGCAGAAA...GTGTTTGATGCAAAAGAATATTGGGAGTGGCTGACTGTGGCAGACATGTAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGTTGCAGCAGCATGCCTaGATCGGTTATATATTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKLQQHA*IGYILS Trigger: CGACAATATATAACCGATGCAGGCATGCTGCTGCAA...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGGCTTGAAACATGGATaGTGTCTTGGAGCTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTGLKHG*CLGAGV Trigger: CACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | CAAATGGCGAGTCACTATTTCACCTTCAGACAAACTAGTTCATTTTGCTTTAGGACATGGATGCTGTCTTaGAGCTGGAGTGACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QMASHYFTFRQTSSFCFRTWMLS*SWSDRC Trigger: GCATCTGTCACTCCAGCTCCAAGACAGCATCCATGT...CCTAAAGCAAAATGAACTAGTTTGTCTGAAGGTGAAATAGTGACTCGCCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGAAGTGCCGTAATAGATaGCATTCTCAATCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKKCRNR*HSQSGL Trigger: CAGCCCTGATTGAGAATGCCATCTATTACGGCACTT...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGTACACACTTCCTCAGTaGGTGGTTGTACTTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKYTLPQ*VVVLDA Trigger: AGCATCAAGTACAACCACCCACTGAGGAAGTGTGTA...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTCTCCCATGAACTGCTaGAAACCAAGCAGATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQSPMNC*KPSRFK Trigger: TTTGAATCTGCTTGGTTTCCAGCAGTTCATGGGAGA...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGTTATACTGGAAGACATaGAGAGATATCGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKLYWKT*RDIAHQ Trigger: CTGGTGGGCGATATCTCTCCATGTCTTCCAGTATAA...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTCCAGAAAATTGGCATaGTTCCATCTGGAATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQSRKLA*FHLECN Trigger: GTTACATTCCAGATGGAATCATGCCAATTTTCTGGA...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CCTTTCCTTTTTGGACACTGTGGACTGTTGGATCTGATGGGTTTTTATGATGGGTCCAGAAAATTGGCATaGTTCCATCTGGAATGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFLFGHCGLLDLMGFYDGSRKLA*FHLECN Trigger: GTTACATTCCAGATGGAATCATGCCAATTTTCTGGA...CCCATCATAAAAACCCATCAGATCCAACAGTCCACAGTGTCCAAAAAGGAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGCCACGTCAAAAACTGTaGTGTCCAATAAACTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKPRQKL*CPINYP Trigger: AGGGTAGTTTATTGGACATCACAGTTTTTGACGTGG...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGATTTTCTGGCTCAGGTaGCTGAAAGGTGTGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKIFWLR*LKGVNK Trigger: TTTGTTCACACCTTTCAGTCACCTGAGCCAGAAAAT...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TATGATCGGTTTTCAATGCTGTTTTTGTTATCCTCACACCGTTTACAGAGAGAACTGGTGGGAGATGGATaGATCCATATGGGTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: YDRFSMLFLLSSHRLQRELVGDG*IHMGQS Trigger: GGATTGACCCATATGGATTCATCCATCTCCCACCAG...TTCTCTCTGTAAACGGTGTGAGGATAACAAAAACAGCATTGAAAACCGATCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGTATTTTCAGGAGGGCTaGAATTTGCAGCAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: YHSIAEQPDVFFTRSINRYFQEG*NLQQHA Trigger: GGCATGCTGCTGCAAATTCCAGCCCTCCTGAAAATA...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TATGATCGGTTTTCAATGCTGTTTTTGTTATCCTCACACCGTTTACAGAGAGAAACATGGATGCTGTCTTaGAGCTGGAGTGACAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YDRFSMLFLLSSHRLQRETWMLS*SWSDRC Trigger: GCATCTGTCACTCCAGCTCCAAGACAGCATCCATGT...TTCTCTCTGTAAACGGTGTGAGGATAACAAAAACAGCATTGAAAACCGATCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTACCCTCCAGAAAATTaGCATGATTCCATCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQYPPEN*HDSIWN Trigger: ATTCCAGATGGAATCATGCCAATTTTCTGGAGGGTA...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGTCTCCCATGAACTGCTaGAAACCAAGCAGATTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKSPMNC*KPSRFK Trigger: TTTGAATCTGCTTGGTTTCCAGCAGTTCATGGGAGA...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGAGAAATTTGACTCTTTaGGGTCAGGATGGACGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKRNLTL*GQDGRF Trigger: GAAACGTCCATCCTGACCCCAAAGAGTCAAATTTCT...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGATGATTACCAGTCTGTaGTGTTTCTTAAAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQMITSL*CFLKSP Trigger: TGGAGACTTTAAGAAACAGCACAGACTGGTAATCAT...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGGATCTTGCATATGACTaGATAAAAGGTAACAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQDLAYD*IKGNRI Trigger: GATCCTGTTACCTTTTATGCAGTCATATGCAAGATC...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTGTCATCAGTTTGGCTaGCTTAAAGTAAGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQCHQFG*LKVSLH Trigger: ATGAAGACTTACTTTAAGGCAGCCAAACTGATGACA...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGCATGATAGATGTATATaGAGTTGGCTGGGTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKHDRCI*SWLGIL Trigger: CAGAATACCCAGCCAACTGCATATACATCTATCATG...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGATCCGTAAACGTTTCTaGATTAAAATCCAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKIRKRF*IKIQRL Trigger: GAGCCTCTGGATTTTAATGCAGAAACGTTTACGGAT...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGAAGTGCCGTAATAGATaGCATTCTCAATCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YHSIAEQPDVFFTRSINRKCRNR*HSQSGL Trigger: CAGCCCTGATTGAGAATGCCATCTATTACGGCACTT...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGAAGATAACCCCTTTTaGCTCCATTCCAGTATGACC | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTEDNPF*LHSSMT Trigger: GGTCATACTGGAATGGAGCCAAAAGGGGTTATCTTC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TATGATCGGTTTTCAATGCTGTTTTTGTTATCCTCACACCGTTTACAGAGAGAAGTATATGCAGTTGGCTaGGTATTCTGGTGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: YDRFSMLFLLSSHRLQREVYAVG*VFWWEM Trigger: CATCTCCCACCAGAATACCCAGCCAACTGCATATAC...TTCTCTCTGTAAACGGTGTGAGGATAACAAAAACAGCATTGAAAACCGATCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTTTATACTGGAAGACATaGAGAGATATCGCCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTLYWKT*RDIAHQ Trigger: CTGGTGGGCGATATCTCTCCATGTCTTCCAGTATAA...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGCTATCCCAATCGTCTaGAGTTGGTTCCATTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTAIPIV*SWFHSK Trigger: TTTAGAATGGAACCAACTTCAGACGATTGGGATAGC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGGCTATCCCAATCGTCTaGAGTTGGTTCCATTCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: YHSIAEQPDVFFTRSINRAIPIV*SWFHSK Trigger: TTTAGAATGGAACCAACTTCAGACGATTGGGATAGC...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGTGGGTGGTTGTACTTaGTGCTCTCATTTACTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTVGGCT*CSHLLY Trigger: GTAAAGTAAATGAGAGCATCAAGTACAACCACCCAC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGAAAATAACATGCCACTaGACAGAAGGCTATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FVILTPFTERTEEIQGTKKITCH*TEGYKH Trigger: ATGCTTATAGCCTTCTGTTCAGTGGCATGTTATTTT...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTTATCATTATCTCCCATaGACTGCTGGAAACCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTYHYLP*TAGNQA Trigger: TGCTTGGTTTCCAGCAGTTCATGGGAGATAATGATA...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TCCAAGTCTCTAGCAACAAAAGCCACTGATTTGGAAGTACTATCCAAAAAGAAAGTGGGTGGTTGTACTTaGTGCTCTCATTTACTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SKSLATKATDLEVLSKKKVGGCT*CSHLLY Trigger: GTAAAGTAAATGAGAGCATCAAGTACAACCACCCAC...TTTCTTTTTGGATAGTACTTCCAAATCAGTGGCTTTTGTTGCTAGAGACTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGAATTTGCAGCAGCATaGCTGCATCGGTTATATATT | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTEFAAA*LHRLYI Trigger: AATATATAACCGATGCAGGCATGCTGCTGCAAATTC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CAAATGGCGAGTCACTATTTCACCTTCAGACAAACTAGTTCATTTTGCTTTAGGTGGTTCCATTCTAAATaGAAACGTGGGTTTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QMASHYFTFRQTSSFCFRWFHSK*KRGFTA Trigger: AGCTGTAAACCCACGTTTGCATTTAGAATGGAACCA...CCTAAAGCAAAATGAACTAGTTTGTCTGAAGGTGAAATAGTGACTCGCCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TATGATCGGTTTTCAATGCTGTTTTTGTTATCCTCACACCGTTTACAGAGAGAATTATCTCCCATGAACTaGTGGAAACCAAGCAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: YDRFSMLFLLSSHRLQRELSPMN*WKPSRF Trigger: GAATCTGCTTGGTTTCCAGCAGTTCATGGGAGATAA...TTCTCTCTGTAAACGGTGTGAGGATAACAAAAACAGCATTGAAAACCGATCATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGATCCGTAAACGTTTCTaGATTAAAATCCAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YHSIAEQPDVFFTRSINRIRKRF*IKIQRL Trigger: GAGCCTCTGGATTTTAATGCAGAAACGTTTACGGAT...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| 3UTR CAA 72 bp | TCCACCCAGAAATCATTTGAGAATGGAACTTTGTTATaGTTACAGTGGCTAATATGGAAGGAAATGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: STQKSFENGTLL*LQWLIWKEMEV Trigger: CACCTCCATTTCCTTCCATATTAGCCACTGTAACAATAACAAAGTTCCATTCTCAAATGATTTCTGGGTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | TATGATCGGTTTTCAATGCTGTTTTTGTTATCCTCACACCGTTTACAGAGAGAAACGGTGCCTTTGAACTaGATAAATCACCTGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: YDRFSMLFLLSSHRLQRETVPLN*INHLFM Trigger: CATAAACAGGTGATTTATTCAGTTCAAAGGCACCGT...TTCTCTCTGTAAACGGTGTGAGGATAACAAAAACAGCATTGAAAACCGATCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTAAAATAACATGCCACTaGACAGAAGGCTATAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTKITCH*TEGYKH Trigger: ATGCTTATAGCCTTCTGTTCAGTGGCATGTTATTTT...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTGATCTTGCATATGACTaGATAAAAGGTAACAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTDLAYD*IKGNRI Trigger: GATCCTGTTACCTTTTATGCAGTCATATGCAAGATC...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | TATGATCGGTTTTCAATGCTGTTTTTGTTATCCTCACACCGTTTACAGAGAGAATGGTTCCATTCTAAATaGAAACGTGGGTTTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YDRFSMLFLLSSHRLQREWFHSK*KRGFTA Trigger: AGCTGTAAACCCACGTTTGCATTTAGAATGGAACCA...TTCTCTCTGTAAACGGTGTGAGGATAACAAAAACAGCATTGAAAACCGATCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTATGGATGAATCCATATaGGTCAATCCCAAGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTMDESI*VNPKKL Trigger: TAACTTCTTGGGATTGACCCATATGGATTCATCCAT...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CCA 90 bp | TACCATTCAATAGCTGAACAGCCAGATGTTTTCTTTACAAGGAGCATAAACAGGATGGATGAATCCATATaGGTCAATCCCAAGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YHSIAEQPDVFFTRSINRMDESI*VNPKKL Trigger: TAACTTCTTGGGATTGACCCATATGGATTCATCCAT...CCTGTTTATGCTCCTTGTAAAGAAAACATCTGGCTGTTCAGCTATTGAATGGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTAAACTCAAGTTTACGCAGCAAAGTAACTTTTCTATATGGTTGGGGACAAATGATTACCAGTCTGTaGTGTTTCTTAAAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLNSSLRSKVTFLYGWGQMITSL*CFLKSP Trigger: TGGAGACTTTAAGAAACAGCACAGACTGGTAATCAT...TTGTCCCCAACCATATAGAAAAGTTACTTTGCTGCGTAAACTTGAGTTTAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR GCA 90 bp | ATTCCAGAAACCAATCATGAAATTATAAGCAGCATTCCATTATCACTGTTCTGGCATGATAGATGTATATaGAGTTGGCTGGGTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPETNHEIISSIPLSLFWHDRCI*SWLGIL Trigger: CAGAATACCCAGCCAACTGCATATACATCTATCATG...CCAGAACAGTGATAATGGAATGCTGCTTATAATTTCATGATTGGTTTCTGGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| 3UTR CAA 72 bp | ATATTGTTAAGATATGATCGGTTTTCAATGCTGTTTTaGTTATCCTCACACCGTTTACAGAGAGAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLRYDRFSMLF*LSSHRLQREQR Trigger: CCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAAAACAGCATTGAAAACCGATCATATCTTAACAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 90 bp | CCACGGCTTGAAACATGGATGCTGTCTTGGAGCTGGAGTGACAGATaGATCCAGTCCCGTAACGTTGGTATTTTCAGGAGGGCTGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: PRLETWMLSWSWSDR*IQSRNVGIFRRAGI Trigger: AATTCCAGCCCTCCTGAAAATACCAACGTTACGGGACTGGATGCATCTGTCACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 90 bp | CCCGTAACGTTGGTATTTTCAGGAGGGCTGGAATTTGCAGCAGCATaGCTGCATCGGTTATATATTGTCGTACTGACATCCAGCGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVTLVFSGGLEFAAA*LHRLYIVVLTSSGS Trigger: ACTGCCGCTGGATGTCAGTACGACAATATATAACCGATGCAGGCATGCTGCTGCAAATTCCAGCCCTCCTGAAAATACCAACGTTACGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | TGGAATGTAACTCCACGGCTTGAAACATGGATGCTGTCTTGGAGCTaGAGTGACAGATGCATCCAGTCCCGTAACGTTGGTATTTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WNVTPRLETWMLSWS*SDRCIQSRNVGIFR Trigger: CCTGAAAATACCAACGTTACGGGACTGGATGCATCTGTCACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCCGTGGAGTTACATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | TCCATCTGGAATGTAACTCCACGGCTTGAAACATGGATGCTGTCTTaGAGCTGGAGTGACAGATGCATCCAGTCCCGTAACGTTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SIWNVTPRLETWMLS*SWSDRCIQSRNVGI Trigger: AATACCAACGTTACGGGACTGGATGCATCTGTCACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCCGTGGAGTTACATTCCAGATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | AATTGGCATGATTCCATCTGGAATGTAACTCCACGGCTTGAAACATaGATGCTGTCTTGGAGCTGGAGTGACAGATGCATCCAGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NWHDSIWNVTPRLET*MLSWSWSDRCIQSR Trigger: ACGGGACTGGATGCATCTGTCACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCCGTGGAGTTACATTCCAGATGGAATCATGCCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 90 bp | TGCATCCAGTCCCGTAACGTTGGTATTTTCAGGAGGGCTGGAATTTaGAGCAGCATGCCTGCATCGGTTATATATTGTCGTACTGACATC | + |
|
Preference number: 5 (lower is better) Translates to: CIQSRNVGIFRRAGI*SSMPASVIYCRTDI Trigger: GATGTCAGTACGACAATATATAACCGATGCAGGCATGCTGCTGCAAATTCCAGCCCTCCTGAAAATACCAACGTTACGGGACTGGATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGAACAGACCCCATGTGTaGGCAGCAGCTATCCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQNRPHV*AAAIPI Trigger: GATTGGGATAGCTGCTGCCAACACATGGGGTCTGTT...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGAATCTGCCATTGCACTaGAGTCCGACGGTGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQNLPLH*SPTVPL Trigger: CAAAGGCACCGTCGGACTCAAGTGCAATGGCAGATT...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 90 bp | ACAACAATCACAGAGAAGATAGACAAAACCACAGCAAGGGTCCTGTaGAACCATGGACGCAAAAGGCATTCCCAGTACCACTCAACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: TTITEKIDKTTARVL*NHGRKRHSQYHSTV Trigger: TACTGTTGAGTGGTACTGGGAATGCCTTTTGCGTCCATGGTTTCACAGGACCCTTGCTGTGGTTTTGTCTATCTTCTCTGTGATTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | TATGCAGTTGGCTGGGTATTCTGGTGGGAGATGGATGAATCCATATaGGTCAATCCCAAGAAGTTAAGACATAAAGGAGGAGTCAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: YAVGWVFWWEMDESI*VNPKKLRHKGGVKR Trigger: CCGTTTGACTCCTCCTTTATGTCTTAACTTCTTGGGATTGACCCATATGGATTCATCCATCTCCCACCAGAATACCCAGCCAACTGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | CACAGAGAAGATAGACAAAACCACAGCAAGGGTCCTGTGAAACCATaGACGCAAAAGGCATTCCCAGTACCACTCAACAGTAGGATTATA | + |
|
Preference number: 5 (lower is better) Translates to: HREDRQNHSKGPVKP*TQKAFPVPLNSRII Trigger: TATAATCCTACTGTTGAGTGGTACTGGGAATGCCTTTTGCGTCCATGGTTTCACAGGACCCTTGCTGTGGTTTTGTCTATCTTCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | GGTGAGAAACTGCCCTGGACAAGTTCAAGTCTGACCACCCCATGTAGAACGTATAGTGGGTGGTTGTACTaGATGCTCTCATTTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GEKLPWTSSSLTTPCRTYSGWLY*MLSFTL Trigger: TAAAGTAAATGAGAGCATCAAGTACAACCACCCACT...ATACGTTCTACATGGGGTGGTCAGACTTGAACTTGTCCAGGGCAGTTTCTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | TCATCCGTAAACGTTTCTGCATTAAAATCCAGAGGCTCAGCATCCTaGAGAAGTTCTATTCGGTCTCTTTCAGTCCTGTTATTAGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSVNVSALKSRGSAS*RSSIRSLSVLLLAL Trigger: CAGGGCTAATAACAGGACTGAAAGAGACCGAATAGAACTTCTCCAGGATGCTGAGCCTCTGGATTTTAATGCAGAAACGTTTACGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | TCAGAGGTTAAAAGCATTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGTTCCTCAGTGGGTGGTaGTACTTGATGCTCTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SEVKSIDCSSKGPEFNSQFLSGW*YLMLSF Trigger: AAATGAGAGCATCAAGTACAACCACCCACTGAGGAA...CTGGGAATTGAACTCAGGACCTTTGGAAGAGCAGTCAATGCTTTTAACCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 90 bp | TTGATCTTGCCGGTGATGGAGAAACCTCCAGATCTTGCATATGACTaGATAAAAGGTAACAGGATCCACGTCAAAAACTGTGATGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LILPVMEKPPDLAYD*IKGNRIHVKNCDVQ Trigger: TTGGACATCACAGTTTTTGACGTGGATCCTGTTACCTTTTATGCAGTCATATGCAAGATCTGGAGGTTTCTCCATCACCGGCAAGATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 90 bp | CTCCAAATTCTCTTCTGCATCTGCCTTCTCTGTCATCAGTTTGGCTaGCTTAAAGTAAGTCTTCATAAGAAGATAACCCCTTTTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQILFCICLLCHQFG*LKVSLHKKITPFGS Trigger: GGAGCCAAAAGGGGTTATCTTCTTATGAAGACTTACTTTAAGGCAGCCAAACTGATGACAGAGAAGGCAGATGCAGAAGAGAATTTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | ATCCATACCCCAATAATAACACAAGGAGAAACAGACCCCATGTGTTaGCAGCAGCTATCCCAATCGTCTGAAGTTGGTTCCATTCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IHTPIITQGETDPMC*QQLSQSSEVGSILN Trigger: ATTTAGAATGGAACCAACTTCAGACGATTGGGATAGCTGCTGCCAACACATGGGGTCTGTTTCTCCTTGTGTTATTATTGGGGTATGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | ATGGAACCCATGATAGATGTATATGCAGTTGGCTGGGTATTCTGGTaGGAGATGGATGAATCCATATGGGTCAATCCCAAGAAGTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MEPMIDVYAVGWVFW*EMDESIWVNPKKLR Trigger: TCTTAACTTCTTGGGATTGACCCATATGGATTCATCCATCTCCCACCAGAATACCCAGCCAACTGCATATACATCTATCATGGGTTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | TTCATGGAACCCATGATAGATGTATATGCAGTTGGCTGGGTATTCTaGTGGGAGATGGATGAATCCATATGGGTCAATCCCAAGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: FMEPMIDVYAVGWVF*WEMDESIWVNPKKL Trigger: TAACTTCTTGGGATTGACCCATATGGATTCATCCATCTCCCACCAGAATACCCAGCCAACTGCATATACATCTATCATGGGTTCCATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | CAGATGGTACCCAATAAAGCCTATCAGAAAAGAGGATGCTCTATTCAACAAACTCAAAAGAATCTGCCATaGCACTTGAGTCCGACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QMVPNKAYQKRGCSIQQTQKNLP*HLSPTV Trigger: CACCGTCGGACTCAAGTGCAATGGCAGATTCTTTTG...AGTTTGTTGAATAGAGCATCCTCTTTTCTGATAGGCTTTATTGGGTACCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 90 bp | CTTTTCCTTCATCAACTAGATCTGATGTCATATCATTATCTCCCATaGACTGCTGGAAACCAAGCAGATTCAAACAACGGGTGCCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LFLHQLDLMSYHYLP*TAGNQADSNNGCPN Trigger: GTTTGGGCACCCGTTGTTTGAATCTGCTTGGTTTCCAGCAGTTCATGGGAGATAATGATATGACATCAGATCTAGTTGATGAAGGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | GTAGGGCACTTTTTAAGTATTGTGTCTACACACTTCCTCAGTGGGTaGTTGTACTTGATGCTCTCATTTACTTTACGAACCTCCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VGHFLSIVSTHFLSG*LYLMLSFTLRTSSI Trigger: AATGGAGGAGGTTCGTAAAGTAAATGAGAGCATCAAGTACAACCACCCACTGAGGAAGTGTGTAGACACAATACTTAAAAAGTGCCCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | ATCTGTAGGGCACTTTTTAAGTATTGTGTCTACACACTTCCTCAGTaGGTGGTTGTACTTGATGCTCTCATTTACTTTACGAACCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICRALFKYCVYTLPQ*VVVLDALIYFTNLL Trigger: GAGGAGGTTCGTAAAGTAAATGAGAGCATCAAGTACAACCACCCACTGAGGAAGTGTGTAGACACAATACTTAAAAAGTGCCCTACAGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | ATTCCAGAAACCAATCATGAAATTATAAGCAGCATTCCATTATCACTGTTCTGGAATCTGCCATTGCACTaGAGTCCGACGGTGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IPETNHEIISSIPLSLFWNLPLH*SPTVPL Trigger: CAAAGGCACCGTCGGACTCAAGTGCAATGGCAGATT...CCAGAACAGTGATAATGGAATGCTGCTTATAATTTCATGATTGGTTTCTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS GCA 90 bp | CCTTCATCAACTAGATCTGATGTCATATCATTATCTCCCATGAACTaGTGGAAACCAAGCAGATTCAAACAACGGGTGCCCAAACTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSSTRSDVISLSPMN*WKPSRFKQRVPKLK Trigger: TTTTAGTTTGGGCACCCGTTGTTTGAATCTGCTTGGTTTCCAGCAGTTCATGGGAGATAATGATATGACATCAGATCTAGTTGATGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTTATCCTCACACCGTTTACAGAGAGAACAGAGGAAATACAGGGCACAAAGAGTGGGTGGTTGTACTaGATGCTCTCATTTACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FVILTPFTERTEEIQGTKSGWLY*MLSFTL Trigger: TAAAGTAAATGAGAGCATCAAGTACAACCACCCACT...CTTTGTGCCCTGTATTTCCTCTGTTCTCTCTGTAAACGGTGTGAGGATAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS-3UTR CAA 90 bp | CAAATGGCGAGTCACTATTTCACCTTCAGACAAACTAGTTCATTTTGCTTTAGGTTCCTCAGTGGGTGGTaGTACTTGATGCTCTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: QMASHYFTFRQTSSFCFRFLSGW*YLMLSF Trigger: AAATGAGAGCATCAAGTACAACCACCCACTGAGGAA...CCTAAAGCAAAATGAACTAGTTTGTCTGAAGGTGAAATAGTGACTCGCCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS CCA 90 bp | TCATCAACTAGATCTGATGTCATATCATTATCTCCCATGAACTGCTaGAAACCAAGCAGATTCAAACAACGGGTGCCCAAACTAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SSTRSDVISLSPMNC*KPSRFKQRVPKLKY Trigger: GTATTTTAGTTTGGGCACCCGTTGTTTGAATCTGCTTGGTTTCCAGCAGTTCATGGGAGATAATGATATGACATCAGATCTAGTTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 90 bp | AGTAGGATTATAAAAATATTGGATAAATCGATTTTCTGGCTCAGGTaGCTGAAAGGTGTGAACAAACTGGTGAGTTGCGCTAGTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: SRIIKILDKSIFWLR*LKGVNKLVSCASFI Trigger: AATGAAACTAGCGCAACTCACCAGTTTGTTCACACCTTTCAGTCACCTGAGCCAGAAAATCGATTTATCCAATATTTTTATAATCCTACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | ACTCCACGGCTTGAAACATGGATGCTGTCTTGGAGCTaGAGTGACAGATGCATCCAGTCCCGTAACGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TPRLETWMLSWS*SDRCIQSRNVG Trigger: ACCAACGTTACGGGACTGGATGCATCTGTCACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCCGTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 72 bp | GAAACATGGATGCTGTCTTGGAGCTGGAGTGACAGATaGATCCAGTCCCGTAACGTTGGTATTTTCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ETWMLSWSWSDR*IQSRNVGIFRR Trigger: CCTCCTGAAAATACCAACGTTACGGGACTGGATGCATCTGTCACTCCAGCTCCAAGACAGCATCCATGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | ACTGAACAGAAGGCTATAAGCATCGGTCTGATGGTGTaGGGCCAGGTAGTAGTAGTTAAACACGCGGATCCT | + |
|
Preference number: 6 (lower is better) Translates to: TEQKAISIGLMV*GQVVVVKHADP Trigger: AGGATCCGCGTGTTTAACTACTACTACCTGGCCTCACACCATCAGACCGATGCTTATAGCCTTCTGTTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | CATGGAGAGATATCGCCCACCAGGTTGATACCTTCCTaGCTCAGGTTCCAGAGATTCATCCGTAAACGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: HGEISPTRLIPS*LRFQRFIRKRF Trigger: GAAACGTTTACGGATGAATCTCTGGAACCTGAGTCAGGAAGGTATCAACCTGGTGGGCGATATCTCTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | ATACTGGAAGACATGGAGAGATATCGCCCACCAGGTTaGTACCTTCCTGACTCAGGTTCCAGAGATTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: ILEDMERYRPPG*YLPDSGSRDSS Trigger: GGATGAATCTCTGGAACCTGAGTCAGGAAGGTATCAACCTGGTGGGCGATATCTCTCCATGTCTTCCAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | ACAGAGAAGATAGACAAAACCACAGCAAGGGTCCTGTaGAACCATGGACGCAAAAGGCATTCCCAGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: TEKIDKTTARVL*NHGRKRHSQYH Trigger: GTGGTACTGGGAATGCCTTTTGCGTCCATGGTTTCACAGGACCCTTGCTGTGGTTTTGTCTATCTTCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | GATTCCATCTGGAATGTAACTCCACGGCTTGAAACATaGATGCTGTCTTGGAGCTGGAGTGACAGATGCATC | + |
|
Preference number: 6 (lower is better) Translates to: DSIWNVTPRLET*MLSWSWSDRCI Trigger: GATGCATCTGTCACTCCAGCTCCAAGACAGCATCCATGTTTCAAGCCGTGGAGTTACATTCCAGATGGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | GATAGACAAAACCACAGCAAGGGTCCTGTGAAACCATaGACGCAAAAGGCATTCCCAGTACCACTCAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: DRQNHSKGPVKP*TQKAFPVPLNS Trigger: ACTGTTGAGTGGTACTGGGAATGCCTTTTGCGTCCATGGTTTCACAGGACCCTTGCTGTGGTTTTGTCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | AGACCCCATGTGTTGGCAGCAGCTATCCCAATCGTCTaGAGTTGGTTCCATTCTAAATGCAAACGTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RPHVLAAAIPIV*SWFHSKCKRGF Trigger: AAACCCACGTTTGCATTTAGAATGGAACCAACTTCAGACGATTGGGATAGCTGCTGCCAACACATGGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 72 bp | TCCCGTAACGTTGGTATTTTCAGGAGGGCTGGAATTTaGAGCAGCATGCCTGCATCGGTTATATATTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SRNVGIFRRAGI*SSMPASVIYCR Trigger: ACGACAATATATAACCGATGCAGGCATGCTGCTGCAAATTCCAGCCCTCCTGAAAATACCAACGTTACGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | CCAATAATAACACAAGGAGAAACAGACCCCATGTGTTaGCAGCAGCTATCCCAATCGTCTGAAGTTGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PIITQGETDPMC*QQLSQSSEVGS Trigger: GGAACCAACTTCAGACGATTGGGATAGCTGCTGCCAACACATGGGGTCTGTTTCTCCTTGTGTTATTATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | CCCATGATAGATGTATATGCAGTTGGCTGGGTATTCTaGTGGGAGATGGATGAATCCATATGGGTCAATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PMIDVYAVGWVF*WEMDESIWVNP Trigger: GGGATTGACCCATATGGATTCATCCATCTCCCACCAGAATACCCAGCCAACTGCATATACATCTATCATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 72 bp | TTGGTATTTTCAGGAGGGCTGGAATTTGCAGCAGCATaGCTGCATCGGTTATATATTGTCGTACTGACATCC | + |
|
Preference number: 6 (lower is better) Translates to: LVFSGGLEFAAA*LHRLYIVVLTS Trigger: GGATGTCAGTACGACAATATATAACCGATGCAGGCATGCTGCTGCAAATTCCAGCCCTCCTGAAAATACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | GGCTGGGTATTCTGGTGGGAGATGGATGAATCCATATaGGTCAATCCCAAGAAGTTAAGACATAAAGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GWVFWWEMDESI*VNPKKLRHKGG Trigger: TCCTCCTTTATGTCTTAACTTCTTGGGATTGACCCATATGGATTCATCCATCTCCCACCAGAATACCCAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CAA 72 bp | GTCCTGTTATTAGCCCTGGTGTATTTGGATGACCAGTaGGTAGTCGTGTCTGAGAAATTTGACTCTTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLLLALVYLDDQ*VVVSEKFDSLG Trigger: CCCCAAAGAGTCAAATTTCTCAGACACGACTACCAACTGGTCATCCAAATACACCAGGGCTAATAACAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | ATATGCAGTTGGCTGGGTATTCTGGTGGGAGATGGATaGATCCATATGGGTCAATCCCAAGAAGTTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: ICSWLGILVGDG*IHMGQSQEVKT Trigger: TGTCTTAACTTCTTGGGATTGACCCATATGGATTCATCCATCTCCCACCAGAATACCCAGCCAACTGCATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 72 bp | CCGGTGATGGAGAAACCTCCAGATCTTGCATATGACTaGATAAAAGGTAACAGGATCCACGTCAAAAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: PVMEKPPDLAYD*IKGNRIHVKNC Trigger: ACAGTTTTTGACGTGGATCCTGTTACCTTTTATGCAGTCATATGCAAGATCTGGAGGTTTCTCCATCACCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | TTCATGGAACCCATGATAGATGTATATGCAGTTGGCTaGGTATTCTGGTGGGAGATGGATGAATCCATATGG | + |
|
Preference number: 6 (lower is better) Translates to: FMEPMIDVYAVG*VFWWEMDESIW Trigger: CCATATGGATTCATCCATCTCCCACCAGAATACCCAGCCAACTGCATATACATCTATCATGGGTTCCATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CAA 72 bp | CGGTCTCTTTCAGTCCTGTTATTAGCCCTGGTGTATTaGGATGACCAGTTGGTAGTCGTGTCTGAGAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: RSLSVLLLALVY*DDQLVVVSEKF Trigger: AAATTTCTCAGACACGACTACCAACTGGTCATCCAAATACACCAGGGCTAATAACAGGACTGAAAGAGACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 72 bp | CTCTTCTGCATCTGCCTTCTCTGTCATCAGTTTGGCTaGCTTAAAGTAAGTCTTCATAAGAAGATAACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LFCICLLCHQFG*LKVSLHKKITP Trigger: AGGGGTTATCTTCTTATGAAGACTTACTTTAAGGCAGCCAAACTGATGACAGAGAAGGCAGATGCAGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | AGATCTGATGTCATATCATTATCTCCCATGAACTGCTaGAAACCAAGCAGATTCAAACAACGGGTGCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSDVISLSPMNC*KPSRFKQRVPK Trigger: TTTGGGCACCCGTTGTTTGAATCTGCTTGGTTTCCAGCAGTTCATGGGAGATAATGATATGACATCAGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | AACGTTTCTGCATTAAAATCCAGAGGCTCAGCATCCTaGAGAAGTTCTATTCGGTCTCTTTCAGTCCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: NVSALKSRGSAS*RSSIRSLSVLL Trigger: TAACAGGACTGAAAGAGACCGAATAGAACTTCTCCAGGATGCTGAGCCTCTGGATTTTAATGCAGAAACGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CAA 72 bp | ATTGTGTCTACACACTTCCTCAGTGGGTGGTTGTACTaGATGCTCTCATTTACTTTACGAACCTCCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: IVSTHFLSGWLY*MLSFTLRTSSI Trigger: AATGGAGGAGGTTCGTAAAGTAAATGAGAGCATCAAGTACAACCACCCACTGAGGAAGTGTGTAGACACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CAA 90 bp | AGTTCTATTCGGTCTCTTTCAGTCCTGTTATTAGCCCTGGTGTATTaGGATGACCAGTTGGTAGTCGTGTCTGAGAAATTTGACTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSIRSLSVLLLALVY*DDQLVVVSEKFDSL Trigger: CAAAGAGTCAAATTTCTCAGACACGACTACCAACTGGTCATCCAAATACACCAGGGCTAATAACAGGACTGAAAGAGACCGAATAGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | CATCAACTAGATCTGATGTCATATCATTATCTCCCATaGACTGCTGGAAACCAAGCAGATTCAAACAACGGG | + |
|
Preference number: 6 (lower is better) Translates to: HQLDLMSYHYLP*TAGNQADSNNG Trigger: CCCGTTGTTTGAATCTGCTTGGTTTCCAGCAGTTCATGGGAGATAATGATATGACATCAGATCTAGTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CAA 90 bp | TTTTTAAGTATTGTGTCTACACACTTCCTCAGTGGGTGGTTGTACTaGATGCTCTCATTTACTTTACGAACCTCCTCCATTACATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLSIVSTHFLSGWLY*MLSFTLRTSSITSS Trigger: GGAGGATGTAATGGAGGAGGTTCGTAAAGTAAATGAGAGCATCAAGTACAACCACCCACTGAGGAAGTGTGTAGACACAATACTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 72 bp | CGTAAATCAGAAATGCTCCAAATATCAGCAAGTAAGTaGCGTAATAGATGGCATTCTCAATCAGGGCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: RKSEMLQISASK*RNRWHSQSGLF Trigger: AAACAGCCCTGATTGAGAATGCCATCTATTACGGCACTTACTTGCTGATATTTGGAGCATTTCTGATTTACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | GCACTTTTTAAGTATTGTGTCTACACACTTCCTCAGTaGGTGGTTGTACTTGATGCTCTCATTTACTTTACG | + |
|
Preference number: 6 (lower is better) Translates to: ALFKYCVYTLPQ*VVVLDALIYFT Trigger: CGTAAAGTAAATGAGAGCATCAAGTACAACCACCCACTGAGGAAGTGTGTAGACACAATACTTAAAAAGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS TCA 72 bp | ATAAAAATATTGGATAAATCGATTTTCTGGCTCAGGTaGCTGAAAGGTGTGAACAAACTGGTGAGTTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: IKILDKSIFWLR*LKGVNKLVSCA Trigger: AGCGCAACTCACCAGTTTGTTCACACCTTTCAGTCACCTGAGCCAGAAAATCGATTTATCCAATATTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS GCA 72 bp | ATGCAAACGTGGGTTTACAGCTACGTAAATCAGAAATaGTCCAAATATCAGCAAGTAAGTGCCGTAATAGAT | + |
|
Preference number: 6 (lower is better) Translates to: MQTWVYSYVNQK*SKYQQVSAVID Trigger: ATCTATTACGGCACTTACTTGCTGATATTTGGAGCATTTCTGATTTACGTAGCTGTAAACCCACGTTTGCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||
| CDS CCA 72 bp | TTTTTAAGTATTGTGTCTACACACTTCCTCAGTGGGTaGTTGTACTTGATGCTCTCATTTACTTTACGAACC | + |
|
Preference number: 6 (lower is better) Translates to: FLSIVSTHFLSG*LYLMLSFTLRT Trigger: GGTTCGTAAAGTAAATGAGAGCATCAAGTACAACCACCCACTGAGGAAGTGTGTAGACACAATACTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090380.6 ENSMUST00000227556.3 |
||