Pregenerated sensors for LMBRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073725Ensembl transcript IDs: ENSMUST00000095062.10, ENSMUST00000186096.7, ENSMUST00000186190.2, ENSMUST00000190195.2, ENSMUST00000191471.7
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTaGACATGGAAGCAGTCAGTCACCATCCGCTGTCCTGTCATGGTC | + |
Preference number: 1 (lower is better) Translates to: SGSQEQSQKTFAMCR*TWKQSVTIRCPVMV Trigger: GACCATGACAGGACAGCGGATGGTGACTGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 90 bp | TCCCAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATaGAAGCAGTCAGTCACCATCCGCTGTCCTGTCATGGTCCACACA | + |
Preference number: 1 (lower is better) Translates to: SQEQSQKTFAMCRCT*KQSVTIRCPVMVHT Trigger: TGTGTGGACCATGACAGGACAGCGGATGGTGACTGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR GCA 90 bp | AGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGCAATGTaGAGGTGCACATGGAAGCAGTCAGTCACCATCCGCTGTCCTGTC | + |
Preference number: 1 (lower is better) Translates to: SYSGSQEQSQKTFAM*RCTWKQSVTIRCPV Trigger: GACAGGACAGCGGATGGTGACTGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 90 bp | ACAGGCAAAGTGCTGGCAGAGCTGGCTTCTAGAGGTCTCTTTCTTTaGCTTATAGATTGCCTTTTTCTGTGTCCTTCCATGACTTCGTCC | + |
Preference number: 1 (lower is better) Translates to: TGKVLAELASRGLFL*LIDCLFLCPSMTSS Trigger: GGACGAAGTCATGGAAGGACACAGAAAAAGGCAATCTATAAGCCAAAGAAAGAGACCTCTAGAAGCCAGCTCTGCCAGCACTTTGCCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR TCA 90 bp | GAGCAGCCAGTGCTCTTAACTGCTGAGCCATTTCTCCAGCTAGAGTaGGGACTTCAACATGTGACTTTGGAAGGATATATTCTAACAGGG | + |
Preference number: 1 (lower is better) Translates to: EQPVLLTAEPFLQLE*GLQHVTLEGYILTG Trigger: CCCTGTTAGAATATATCCTTCCAAAGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAATGGCTCAGCAGTTAAGAGCACTGGCTGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 90 bp | CTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCATaGCTACATAAATTGATCACTTTGAAGTCGACATGGGACATGAGG | + |
Preference number: 1 (lower is better) Translates to: LSWLEAGSRLLISDS*LHKLITLKSTWDMR Trigger: CCTCATGTCCCATGTCGACTTCAAAGTGATCAATTTATGTAGCCATGAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR CCA 90 bp | ATTTCCGATTCATGGCTACATAAATTGATCACTTTGAAGTCGACATaGGACATGAGGGCCCTCAGTCTTTGGAAAGCCAATGCTCTGAAT | + |
Preference number: 1 (lower is better) Translates to: ISDSWLHKLITLKST*DMRALSLWKANALN Trigger: ATTCAGAGCATTGGCTTTCCAAAGACTGAGGGCCCTCATGTCCCATGTCGACTTCAAAGTGATCAATTTATGTAGCCATGAATCGGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR CCA 90 bp | GTACTCTCTACATGTTATTCTACGAGTATTCTCTACGAGTTATTCTaGTTCCCAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTG | + |
Preference number: 1 (lower is better) Translates to: VLSTCYSTSILYELF*FPRTKSENLCNVQV Trigger: CACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTCGTAGAATAACATGTAGAGAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR GCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCCGTCCCCAAGCTGCCTaGAGAGCCCAGACATCTCTA | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPRPQAA*RAQTSL Trigger: TAGAGATGTCTGGGCTCTGCAGGCAGCTTGGGGACG...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAAGGGAGGCCAAGGGACTaGCCCACACCCCCAAAACGT | + |
Preference number: 2 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQGRPRD*PTPPKR Trigger: ACGTTTTGGGGGTGTGGGTCAGTCCCTTGGCCTCCC...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCGGCGGTCTTGATTTTTaGTGGGCACAATATGGGAGC | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPGGLDF*WAQYGS Trigger: GCTCCCATATTGTGCCCACCAAAAATCAAGACCGCC...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCAGGGGAAAGGCTGCCTaGGCATTCAAGTATGCAGAA | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPRGKAA*AFKYAE Trigger: TTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCT...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCGTTGCCTTGGCTCAATaGCAAACACCATGGACTCAA | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPVALAQ*QTPWTQ Trigger: TTGAGTCCATGGTGTTTGCCATTGAGCCAAGGCAAC...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | TGCAGCAGCCCTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCACTTTGAAGTCGACATaGGACATGAGGGCCCTCAGT | + |
Preference number: 2 (lower is better) Translates to: CSSPELARSWFQASHFRFTLKST*DMRALS Trigger: ACTGAGGGCCCTCATGTCCCATGTCGACTTCAAAGT...GAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR GCA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAACGTCCCCAAGCTGCCTaGAGAGCCCAGACATCTCTA | + |
Preference number: 2 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQRPQAA*RAQTSL Trigger: TAGAGATGTCTGGGCTCTGCAGGCAGCTTGGGGACG...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGGGCGGTCTTGATTTTTaGTGGGCACAATATGGGAGC | + |
Preference number: 2 (lower is better) Translates to: CPVMVHTNSQEPASSLLQGGLDF*WAQYGS Trigger: GCTCCCATATTGTGCCCACCAAAAATCAAGACCGCC...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR GCA 90 bp | TGCAGCAGCCCTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCACAGGCCAGGCCTTTTaGTATAAACAAACAGCAGAG | + |
Preference number: 2 (lower is better) Translates to: CSSPELARSWFQASHFRFTGQAF*YKQTAE Trigger: CTCTGCTGTTTGTTTATAGCAAAAGGCCTGGCCTGT...GAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR GCA 90 bp | TGCAGCAGCCCTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCAAAACCTTTGCAATGTaGAGGTGCACATGGAAGCAG | + |
Preference number: 2 (lower is better) Translates to: CSSPELARSWFQASHFRFKTFAM*RCTWKQ Trigger: CTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTT...GAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR CCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCATTATCCAACAGCTATaGAAGCCAGATGTTGACAGG | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPIIQQL*KPDVDR Trigger: CCTGTCAACATCTGGCTTCCATAGCTGTTGGATAAT...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | TGCAGCAGCCCTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCTCCAAATCCTTTACATaGGAAGCAGCTGAGTATGCT | + |
Preference number: 2 (lower is better) Translates to: CSSPELARSWFQASHFRFSKSFT*EAAEYA Trigger: AGCATACTCAGCTGCTTCTCATGTAAAGGATTTGGA...GAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR TCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCGAGGACTTCAACATGTaGCTTTGGAAGGATATATTC | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPEDFNM*LWKDIF Trigger: GAATATATCCTTCCAAAGTCACATGTTGAAGTCCTC...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGTTTCTCCAGCTAGAGTaGGGACTTCAACATGTGACT | + |
Preference number: 2 (lower is better) Translates to: CPVMVHTNSQEPASSLLQFLQLE*GLQHVT Trigger: AGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAA...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR GCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCTTAAGATCTGAACACTaGCACCTGGAACACATCTTA | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPLRSEH*HLEHIL Trigger: TAAGATGTGTTCCAGGTGGCAGTGTTCAGATCTTAA...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCATTCTGTGTCCTTCCATaGCTTCGTCCCCAAGCTGCC | + |
Preference number: 2 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSFCVLP*LRPQAA Trigger: GGCAGCTTGGGGACGAAGTCATGGAAGGACACAGAA...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCAGACTCATTATGTTATaGGCAGAATTGAAAGCAAGC | + |
Preference number: 2 (lower is better) Translates to: EPASSLLQPLEEQHNPKPRLIML*AELKAS Trigger: GCTTGCTTTCAATTCTGCCCATAACATAATGAGTCT...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | TGCAGCAGCCCTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCTTCACAGCGAAGCAATaGACTAATTCCATTTCTGTT | + |
Preference number: 2 (lower is better) Translates to: CSSPELARSWFQASHFRFFTAKQ*TNSISV Trigger: AACAGAAATGGAATTAGTTCATTGCTTCGCTGTGAA...GAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR CCA 90 bp | TGCAGCAGCCCTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCATTCCCTCACAAACCTaGAAACTCTGTATTTACACA | + |
Preference number: 2 (lower is better) Translates to: CSSPELARSWFQASHFRFIPSQT*KLCIYT Trigger: TGTGTAAATACAGAGTTTCCAGGTTTGTGAGGGAAT...GAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR CCA 90 bp | AGTGGCCAACATCAAGTGTGCTGTGTCTGTAGATTGTTTCTAAATCAGTACATTGCAGCAGCCCTGAGCTaGCTAGAAGCTGGTTCCAGG | + |
Preference number: 2 (lower is better) Translates to: SGQHQVCCVCRLFLNQYIAAALS*LEAGSR Trigger: CCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGC...AATGTACTGATTTAGAAACAATCTACAGACACAGCACACTTGATGTTGGCCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR CAA 90 bp | TCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTaGCAATGTGCAGGTGCACATGGAAGCAGTCAGTCACCATCCGCT | + |
Preference number: 2 (lower is better) Translates to: SLRVILVPKNKVRKP*QCAGAHGSSQSPSA Trigger: AGCGGATGGTGACTGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CAA 90 bp | GAAGCTGGTTCCAGGCTTCTCATTTCCGATTCATGGCTACATAAATaGATCACTTTGAAGTCGACATGGGACATGAGGGCCCTCAGTCTT | + |
Preference number: 2 (lower is better) Translates to: EAGSRLLISDSWLHK*ITLKSTWDMRALSL Trigger: AAGACTGAGGGCCCTCATGTCCCATGTCGACTTCAAAGTGATCAATTTATGTAGCCATGAATCGGAAATGAGAAGCCTGGAACCAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR CCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGATTCCCTCACAAACCTaGAAACTCTGTATTTACACA | + |
Preference number: 2 (lower is better) Translates to: CPVMVHTNSQEPASSLLQIPSQT*KLCIYT Trigger: TGTGTAAATACAGAGTTTCCAGGTTTGTGAGGGAAT...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCATGTTATGGGCAGAATTaGAAGCAAGCTGCCCATGAG | + |
Preference number: 2 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSCYGQN*KQAAHE Trigger: CTCATGGGCAGCTTGCTTTCAATTCTGCCCATAACA...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR GCA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAAAGCCTTTATTTTCACTaGCCAGAACGCAGTCAGAAA | + |
Preference number: 2 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQSLYFH*PERSQK Trigger: TTTCTGACTGCGTTCTGGGCAGTGAAAATAAAGGCT...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGAGAAACACCATAAAATaGCATCATATCCCATCACAA | + |
Preference number: 2 (lower is better) Translates to: CPVMVHTNSQEPASSLLQRNTIK*HHIPSQ Trigger: TTGTGATGGGATATGATGCCATTTTATGGTGTTTCT...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGAGAGGTCTCTTTCTTTaGCTTATAGATTGCCTTTTT | + |
Preference number: 2 (lower is better) Translates to: CPVMVHTNSQEPASSLLQRGLFL*LIDCLF Trigger: AAAAAGGCAATCTATAAGCCAAAGAAAGAGACCTCT...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAAACCAACACAACTTCATaGTGGGCTTCATATATAAGG | + |
Preference number: 2 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQTNTTS*WASYIR Trigger: CCTTATATATGAAGCCCATCATGAAGTTGTGTTGGT...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCAATGTCAAGAAAAAGCTaGGAGGAGTCAGGACTTGGA | + |
Preference number: 2 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSMSRKS*EESGLG Trigger: TCCAAGTCCTGACTCCTCTCAGCTTTTTCTTGACAT...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR GCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCACGTGTGTTAGTTAGTTaGCTTGGCTCAATGGCAAAC | + |
Preference number: 2 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSRVLVS*LGSMAN Trigger: GTTTGCCATTGAGCCAAGGCAACTAACTAACACACG...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR GCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCAAATGGCCAAGAGCCCTaGAAGCAAATAAAACATCAG | + |
Preference number: 2 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSNGQEP*KQIKHQ Trigger: CTGATGTTTTATTTGCTTGCAGGGCTCTTGGCCATT...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGTGTTATGGGCAGAATTaGAAGCAAGCTGCCCATGAG | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLCYGQN*KQAAHE Trigger: CTCATGGGCAGCTTGCTTTCAATTCTGCCCATAACA...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATCCATGGATTAAGATCTaGACACTGCCACCTGGAACA | + |
Preference number: 2 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNPWIKI*TLPPGT Trigger: TGTTCCAGGTGGCAGTGTTCAGATCTTAATCCATGG...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGTTGGTGGGCACAATATaGGAGCCTAATACTGACAGG | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLLVGTI*EPNTDR Trigger: CCTGTCAGTATTAGGCTCCCATATTGTGCCCACCAA...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGGTTGCCTTGGCTCAATaGCAAACACCATGGACTCAA | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLVALAQ*QTPWTQ Trigger: TTGAGTCCATGGTGTTTGCCATTGAGCCAAGGCAAC...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR TCA 90 bp | GCCATTTCTCCAGCTAGAGTGAGGACTTCAACATGTGACTTTGGAAGGATATATTATATAAGGCGGTCTTaGTTTTTGGTGGGCACAATA | + |
Preference number: 2 (lower is better) Translates to: AISPARVRTSTCDFGRIYYIRRS*FLVGTI Trigger: TATTGTGCCCACCAAAAATCAAGACCGCCTTATATA...ATATATCCTTCCAAAGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAATGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR GCA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATAGCCTTTATTTTCACTaGCCAGAACGCAGTCAGAAA | + |
Preference number: 2 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNSLYFH*PERSQK Trigger: TTTCTGACTGCGTTCTGGGCAGTGAAAATAAAGGCT...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR GCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGCTGGGCATTCAAGTATaGAGAAGGAACCATTCAAGT | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLLGIQV*RRNHSS Trigger: ACTTGAATGGTTCCTTCTGCATACTTGAATGCCCAG...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR TCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGACCAACACAACTTCATaGTGGGCTTCATATATAAGG | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLTNTTS*WASYIR Trigger: CCTTATATATGAAGCCCATCATGAAGTTGTGTTGGT...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR TCA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATGAGGACTTCAACATGTaGCTTTGGAAGGATATATTC | + |
Preference number: 2 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNEDFNM*LWKDIF Trigger: GAATATATCCTTCCAAAGTCACATGTTGAAGTCCTC...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR GCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGTTAAGATCTGAACACTaGCACCTGGAACACATCTTA | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLLRSEH*HLEHIL Trigger: TAAGATGTGTTCCAGGTGGCAGTGTTCAGATCTTAA...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR CCA 90 bp | TTCTTTCACAGGTTTCCAAATCCTTTACATGAGAAGCAGCTGAGTATGCTGTCAAGACTCATTATGTTATaGGCAGAATTGAAAGCAAGC | + |
Preference number: 2 (lower is better) Translates to: FFHRFPNPLHEKQLSMLSRLIML*AELKAS Trigger: GCTTGCTTTCAATTCTGCCCATAACATAATGAGTCT...TGACAGCATACTCAGCTGCTTCTCATGTAAAGGATTTGGAAACCTGTGAAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR TCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGCAATGGGTTGTCAAGTaGAAATGTATTATCCAACAG | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLQWVVK*KCIIQQ Trigger: CTGTTGGATAATACATTTTCACTTGACAACCCATTG...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR TCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGTTCACAGCGAAGCAATaGACTAATTCCATTTCTGTT | + |
Preference number: 2 (lower is better) Translates to: EYSLRVILVPKNKVRKPLFTAKQ*TNSISV Trigger: AACAGAAATGGAATTAGTTCATTGCTTCGCTGTGAA...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR CCA 72 bp | TCCTCTGAGATCCAGGTCTCTCTGGCCTGTTCTCCTTaGGAGACTGAGATGGGACTCAGATGGGAAGGCCTG | + |
Preference number: 3 (lower is better) Translates to: SSEIQVSLACSP*ETEMGLRWEGL Trigger: CAGGCCTTCCCATCTGAGTCCCATCTCAGTCTCCCAAGGAGAACAGGCCAGAGAGACCTGGATCTCAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR TCA 72 bp | GATCCAGGTCTCTCTGGCCTGTTCTCCTTGGGAGACTaGGATGGGACTCAGATGGGAAGGCCTGTGTGCAAA | + |
Preference number: 3 (lower is better) Translates to: DPGLSGLFSLGD*DGTQMGRPVCK Trigger: TTTGCACACAGGCCTTCCCATCTGAGTCCCATCTCAGTCTCCCAAGGAGAACAGGCCAGAGAGACCTGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
||
3UTR CCA 72 bp | AGGTCTCTCTGGCCTGTTCTCCTTGGGAGACTGAGATaGGACTCAGATGGGAAGGCCTGTGTGCAAACTACC | + |
Preference number: 3 (lower is better) Translates to: RSLWPVLLGRLR*DSDGKACVQTT Trigger: GGTAGTTTGCACACAGGCCTTCCCATCTGAGTCCCATCTCAGTCTCCCAAGGAGAACAGGCCAGAGAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
||
3UTR GCA 72 bp | CTTTTTCTGTGTCCTTCCATGACTTCGTCCCCAAGCTaGCTGCAGAGCCCAGACATCTCTAGGAGGGATCCA | + |
Preference number: 3 (lower is better) Translates to: LFLCPSMTSSPS*LQSPDISRRDP Trigger: TGGATCCCTCCTAGAGATGTCTGGGCTCTGCAGGCAGCTTGGGGACGAAGTCATGGAAGGACACAGAAAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR CCA 72 bp | CATGGAAGCAGTCAGTCACCATCCGCTGTCCTGTCATaGTCCACACAAACAGCCAAGAGCCAGCATCTTCTC | + |
Preference number: 3 (lower is better) Translates to: HGSSQSPSAVLS*STQTAKSQHLL Trigger: GAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACAGCGGATGGTGACTGACTGCTTCCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
||
3UTR-3UTR CAA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCTCCCATCACAAGTGGTaGCTGGCATTTGAATTCAGG | + |
Preference number: 3 (lower is better) Translates to: EPASSLLQPLEEQHNPKPSHHKW*LAFEFR Trigger: CCTGAATTCAAATGCCAGCAACCACTTGTGATGGGA...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | TTCCTTTGCTGCAGCAGCCCTGAGCTGGCTAGAAGCTaGTTCCAGGCTTCTCATTTCCGATTCATGGCTACA | + |
Preference number: 3 (lower is better) Translates to: FLCCSSPELARS*FQASHFRFMAT Trigger: TGTAGCCATGAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCAGCAAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR CAA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCGCCATGCTCTCATTTTaGATGAAAGCTAGACAGTTC | + |
Preference number: 3 (lower is better) Translates to: EPASSLLQPLEEQHNPKPAMLSF*MKARQF Trigger: GAACTGTCTAGCTTTCATCAAAAATGAGAGCATGGC...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | GCCTGTTCTCCTTGGGAGACTGAGATGGGACTCAGATaGGAAGGCCTGTGTGCAAACTACCTACTGATCTTT | + |
Preference number: 3 (lower is better) Translates to: ACSPWETEMGLR*EGLCANYLLIF Trigger: AAAGATCAGTAGGTAGTTTGCACACAGGCCTTCCCATCTGAGTCCCATCTCAGTCTCCCAAGGAGAACAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR GCA 72 bp | GGTTCCCAAGAACAAAGTCAGAAAACCTTTGCAATGTaGAGGTGCACATGGAAGCAGTCAGTCACCATCCGC | + |
Preference number: 3 (lower is better) Translates to: GSQEQSQKTFAM*RCTWKQSVTIR Trigger: GCGGATGGTGACTGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTGGGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | CAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATaGAAGCAGTCAGTCACCATCCGCTGTCCTGTCATG | + |
Preference number: 3 (lower is better) Translates to: QSQKTFAMCRCT*KQSVTIRCPVM Trigger: CATGACAGGACAGCGGATGGTGACTGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CAA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGGCCATGCTCTCATTTTaGATGAAAGCTAGACAGTTC | + |
Preference number: 3 (lower is better) Translates to: CPVMVHTNSQEPASSLLQAMLSF*MKARQF Trigger: GAACTGTCTAGCTTTCATCAAAAATGAGAGCATGGC...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CAA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCAGAGAGGAGTCAGGACTaGGAAGCACAGGTAGTGAGG | + |
Preference number: 3 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSERSQD*EAQVVR Trigger: CCTCACTACCTGTGCTTCCAAGTCCTGACTCCTCTC...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR GCA 72 bp | GTGAGGAAGTTTAGGAGGCAGCGTGTGTTAGTTAGTTaGCTTGGCTCAATGGCAAACACCATGGACTCAATG | + |
Preference number: 3 (lower is better) Translates to: VRKFRRQRVLVS*LGSMANTMDSM Trigger: CATTGAGTCCATGGTGTTTGCCATTGAGCCAAGGCAACTAACTAACACACGCTGCCTCCTAAACTTCCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | GTGCTGGCAGAGCTGGCTTCTAGAGGTCTCTTTCTTTaGCTTATAGATTGCCTTTTTCTGTGTCCTTCCATG | + |
Preference number: 3 (lower is better) Translates to: VLAELASRGLFL*LIDCLFLCPSM Trigger: CATGGAAGGACACAGAAAAAGGCAATCTATAAGCCAAAGAAAGAGACCTCTAGAAGCCAGCTCTGCCAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CAA 90 bp | AGTGGCCAACATCAAGTGTGCTGTGTCTGTAGATTGTTTCTAAATCAGTACATTGAGAGGAGTCAGGACTaGGAAGCACAGGTAGTGAGG | + |
Preference number: 3 (lower is better) Translates to: SGQHQVCCVCRLFLNQYIERSQD*EAQVVR Trigger: CCTCACTACCTGTGCTTCCAAGTCCTGACTCCTCTC...AATGTACTGATTTAGAAACAATCTACAGACACAGCACACTTGATGTTGGCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR TCA 72 bp | AAAATGTATTATCCAACAGCTATGGAAGCCAGATGTTaGCAGGCAAAGTGCTGGCAGAGCTGGCTTCTAGAG | + |
Preference number: 3 (lower is better) Translates to: KMYYPTAMEARC*QAKCWQSWLLE Trigger: CTCTAGAAGCCAGCTCTGCCAGCACTTTGCCTGTCAACATCTGGCTTCCATAGCTGTTGGATAATACATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR GCA 72 bp | CAATATGGGAGCCTAATACTGACAGGCCAGGCCTTTTaGTATAAACAAACAGCAGAGAGGCTTAGTGTTGCA | + |
Preference number: 3 (lower is better) Translates to: QYGSLILTGQAF*YKQTAERLSVA Trigger: TGCAACACTAAGCCTCTCTGCTGTTTGTTTATAGCAAAAGGCCTGGCCTGTCAGTATTAGGCTCCCATATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR GCA 72 bp | CACCATAAAATGGCATCATATCCCATCACAAGTGGTTaGTGGCATTTGAATTCAGGACCTCTGAAGAGCAGC | + |
Preference number: 3 (lower is better) Translates to: HHKMASYPITSG*WHLNSGPLKSS Trigger: GCTGCTCTTCAGAGGTCCTGAATTCAAATGCCAGCAACCACTTGTGATGGGATATGATGCCATTTTATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | CATAAAATGGCATCATATCCCATCACAAGTGGTTGCTaGCATTTGAATTCAGGACCTCTGAAGAGCAGCCAG | + |
Preference number: 3 (lower is better) Translates to: HKMASYPITSGC*HLNSGPLKSSQ Trigger: CTGGCTGCTCTTCAGAGGTCCTGAATTCAAATGCCAGCAACCACTTGTGATGGGATATGATGCCATTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR-3UTR CAA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATAAGTACAGTCAGAACTaGGGCCGAAGATTCAGGGGC | + |
Preference number: 3 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNKYSQN*GRRFRG Trigger: GCCCCTGAATCTTCGGCCCAAGTTCTGACTGTACTT...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR GCA 72 bp | GACCTTAGTAGTACACCAGAAAACACTATTAGTTTATaGTGCATATGTGGGAGTGCAGGCATAGGCAGGTCA | + |
Preference number: 3 (lower is better) Translates to: DLSSTPENTISL*CICGSAGIGRS Trigger: TGACCTGCCTATGCCTGCACTCCCACATATGCAGCATAAACTAATAGTGTTTTCTGGTGTACTACTAAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR CCA 72 bp | GGGTTGATAAAGAATTTCCTTAGGGGAAAGGCTGCCTaGGCATTCAAGTATGCAGAAGGAACCATTCAAGTA | + |
Preference number: 3 (lower is better) Translates to: GLIKNFLRGKAA*AFKYAEGTIQV Trigger: TACTTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAAATTCTTTATCAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | TCATGGCTACATAAATTGATCACTTTGAAGTCGACATaGGACATGAGGGCCCTCAGTCTTTGGAAAGCCAAT | + |
Preference number: 3 (lower is better) Translates to: SWLHKLITLKST*DMRALSLWKAN Trigger: ATTGGCTTTCCAAAGACTGAGGGCCCTCATGTCCCATGTCGACTTCAAAGTGATCAATTTATGTAGCCATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR-3UTR CAA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAACATGGACTCAATGGGTaGTCAAGTGAAAATGTATTA | + |
Preference number: 3 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQHGLNG*SSENVL Trigger: TAATACATTTTCACTTGACAACCCATTGAGTCCATG...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | CTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCATaGCTACATAAATTGATCACTTTGAAGTCGACATGG | + |
Preference number: 3 (lower is better) Translates to: LEAGSRLLISDS*LHKLITLKSTW Trigger: CCATGTCGACTTCAAAGTGATCAATTTATGTAGCCATGAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR TCA 72 bp | CTACTTGAGTTAGACTCATTATGTTATGGGCAGAATTaGAAGCAAGCTGCCCATGAGTTATGCTTACCCACA | + |
Preference number: 3 (lower is better) Translates to: LLELDSLCYGQN*KQAAHELCLPT Trigger: TGTGGGTAAGCATAACTCATGGGCAGCTTGCTTTCAATTCTGCCCATAACATAATGAGTCTAACTCAAGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR TCA 72 bp | ACATATTCTTGTAGAGGTACTCCATGGATTAAGATCTaGACACTGCCACCTGGAACACATCTTAGAGTCTTG | + |
Preference number: 3 (lower is better) Translates to: TYSCRGTPWIKI*TLPPGTHLRVL Trigger: CAAGACTCTAAGATGTGTTCCAGGTGGCAGTGTTCAGATCTTAATCCATGGAGTACCTCTACAAGAATATGT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR TCA 72 bp | CAATGGCAAACACCATGGACTCAATGGGTTGTCAAGTaGAAATGTATTATCCAACAGCTATGGAAGCCAGAT | + |
Preference number: 3 (lower is better) Translates to: QWQTPWTQWVVK*KCIIQQLWKPD Trigger: ATCTGGCTTCCATAGCTGTTGGATAATACATTTTCACTTGACAACCCATTGAGTCCATGGTGTTTGCCATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR TCA 72 bp | TTCAAGTATGCAGAAGGAACCATTCAAGTACGGCTATaGGGAATCACTCATGTAAATACAGAGGAAATGGCC | + |
Preference number: 3 (lower is better) Translates to: FKYAEGTIQVRL*GITHVNTEEMA Trigger: GGCCATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCTTCTGCATACTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR GCA 72 bp | CTAGCTGACATTAGCGAATTAAGCCTTTATTTTCACTaGCCAGAACGCAGTCAGAAAACTCTGTTAAGTCAC | + |
Preference number: 3 (lower is better) Translates to: LADISELSLYFH*PERSQKTLLSH Trigger: GTGACTTAACAGAGTTTTCTGACTGCGTTCTGGGCAGTGAAAATAAAGGCTTAATTCGCTAATGTCAGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CCA 72 bp | ACATGTTATTCTACGAGTATTCTCTACGAGTTATTCTaGTTCCCAAGAACAAAGTCAGAAAACCTTTGCAAT | + |
Preference number: 3 (lower is better) Translates to: TCYSTSILYELF*FPRTKSENLCN Trigger: ATTGCAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTCGTAGAATAACATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCCGGGTAACAGTACACTaGTCTTTAGGGGCATCTGCG | + |
Preference number: 4 (lower is better) Translates to: EPASSLLQPLEEQHNPKPRVTVH*SLGASA Trigger: CGCAGATGCCCCTAAAGATCAGTGTACTGTTACCCG...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGGCAGCAGTGCTGATGTaGTCAGAGCAACAGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: CPVMVHTNSQEPASSLLQAAVLM*SEQQPV Trigger: CACTGGCTGTTGCTCTGATCACATCAGCACTGCTGC...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCTGGTATGAAGGACAATaGGCAGGAGGATCATGCAGA | + |
Preference number: 4 (lower is better) Translates to: EPASSLLQPLEEQHNPKPWYEGQ*AGGSCR Trigger: TCTGCATGATCCTCCTGCTCATTGTCCTTCATACCA...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | AAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCGGCTCAACCTCACTTTCCCGCTaGCTCTGGTACTTCCGAACG | + |
Preference number: 4 (lower is better) Translates to: KGHFREARFSVQHPYGGSTSLSR*LWYFRT Trigger: CGTTCGGAAGTACCAGAGTCAGCGGGAAAGTGAGGT...TGAGCCGCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
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CDS-3UTR TCA 90 bp | AAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCGGCTCAGCAGCAGTGCTGATGTaGTCAGAGCAACAGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: KGHFREARFSVQHPYGGSAAVLM*SEQQPV Trigger: CACTGGCTGTTGCTCTGATCACATCAGCACTGCTGC...TGAGCCGCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
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CDS-3UTR TCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCCGTCAGCCCAGTCCTTaGATGTGCCATTTTGATTTT | + |
Preference number: 4 (lower is better) Translates to: EPASSLLQPLEEQHNPKPRQPSP*MCHFDF Trigger: AAAATCAAAATGGCACATTCAAGGACTGGGCTGACG...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCAATAGTATGCAGCACTaGAGAACCAGAACTTGTGGA | + |
Preference number: 4 (lower is better) Translates to: EPASSLLQPLEEQHNPKPNSMQH*RTRTCG Trigger: TCCACAAGTTCTGGTTCTTCAGTGCTGCATACTATT...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | GTGGCTAAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCTTTGGGTGCATTTGCTaGCGTCGTCCTCATCCTTCT | + |
Preference number: 4 (lower is better) Translates to: VAKGHFREARFSVQHPYGFGCIC*RRPHPS Trigger: AGAAGGATGAGGACGACGCCAGCAAATGCACCCAAA...GCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTTAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
||
CDS-3UTR CCA 90 bp | GTGGCTAAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCAGCGCCGTTTTAATTTaGGTGCATTTGCTGGCGTCG | + |
Preference number: 4 (lower is better) Translates to: VAKGHFREARFSVQHPYGSAVLI*VHLLAS Trigger: CGACGCCAGCAAATGCACCCAAATTAAAACGGCGCT...GCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTTAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
||
CDS-3UTR CCA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCCAAAAGCATGTTCAGTaGATTGCTCAGGTTAGTTCC | + |
Preference number: 4 (lower is better) Translates to: EPASSLLQPLEEQHNPKPQKHVQ*IAQVSS Trigger: GGAACTAACCTGAGCAATCCACTGAACATGCTTTTG...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | AGGCTTAGTGTTGCAACTGAAGCAGTAACGGAGCTTACAGACAAGCAAGAGTACAGAGCTGCCAGGCCTTaGCCAGTTCCAAGGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: RLSVATEAVTELTDKQEYRAARP*PVPRSS Trigger: TGAAGACCTTGGAACTGGTCAAGGCCTGGCAGCTCT...GTACTCTTGCTTGTCTGTAAGCTCCGTTACTGCTTCAGTTGCAACACTAAGCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CAA 72 bp | CAGGGAATCAATCAGAGCAGCAAGTACAGTCAGAACTaGGGCCGAAGATTCAGGGGCAGACGAGTTAACTCT | + |
Preference number: 4 (lower is better) Translates to: QGINQSSKYSQN*GRRFRGRRVNS Trigger: AGAGTTAACTCGTCTGCCCCTGAATCTTCGGCCCAAGTTCTGACTGTACTTGCTGCTCTGATTGATTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | AAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCGGCTCACGTCAGCCCAGTCCTTaGATGTGCCATTTTGATTTT | + |
Preference number: 4 (lower is better) Translates to: KGHFREARFSVQHPYGGSRQPSP*MCHFDF Trigger: AAAATCAAAATGGCACATTCAAGGACTGGGCTGACG...TGAGCCGCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
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CDS-3UTR TCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCAAGAGCTGCCAGGCCTTaGCCAGTTCCAAGGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSRAARP*PVPRSS Trigger: TGAAGACCTTGGAACTGGTCAAGGCCTGGCAGCTCT...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | AGGCTTAGTGTTGCAACTGAAGCAGTAACGGAGCTTACAGACAAGCAAGAGTACAGAAATAAGAGTGCCTaGGGCCTGGTTCGCCCTCTT | + |
Preference number: 4 (lower is better) Translates to: RLSVATEAVTELTDKQEYRNKSA*GLVRPL Trigger: AAGAGGGCGAACCAGGCCTCAGGCACTCTTATTTCT...GTACTCTTGCTTGTCTGTAAGCTCCGTTACTGCTTCAGTTGCAACACTAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | AGGCTTAGTGTTGCAACTGAAGCAGTAACGGAGCTTACAGACAAGCAAGAGTACTGGCACAGCGAGGGTTaGATTGCCTTTATGGGCATC | + |
Preference number: 4 (lower is better) Translates to: RLSVATEAVTELTDKQEYWHSEG*IAFMGI Trigger: GATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCA...GTACTCTTGCTTGTCTGTAAGCTCCGTTACTGCTTCAGTTGCAACACTAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | TGCAGCAGCCCTGAGCTGGCTAGAAGCTGGTTCCAGGCTTCTCATTTCCGATTCAGTCTTTCTTCACATTaGTTTAAGGCACGTCTATCC | + |
Preference number: 4 (lower is better) Translates to: CSSPELARSWFQASHFRFSLSSH*FKARLS Trigger: GGATAGACGTGCCTTAAAGCAATGTGAAGAAAGACT...GAATCGGAAATGAGAAGCCTGGAACCAGCTTCTAGCCAGCTCAGGGCTGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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CDS-3UTR GCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGTCAATGAATTCCAAGTaGCGCTCTCTTTTCCTAAGC | + |
Preference number: 4 (lower is better) Translates to: CPVMVHTNSQEPASSLLQSMNSK*RSLFLS Trigger: GCTTAGGAAAAGAGAGCGGCACTTGGAATTCATTGA...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAATTTGGGTGCATTTGCTaGCGTCGTCCTCATCCTTCT | + |
Preference number: 4 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQFGCIC*RRPHPS Trigger: AGAAGGATGAGGACGACGCCAGCAAATGCACCCAAA...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CAA 72 bp | ATGGCATCATATCCCATCACAAGTGGTTGCTGGCATTaGAATTCAGGACCTCTGAAGAGCAGCCAGTGCTCT | + |
Preference number: 4 (lower is better) Translates to: MASYPITSGCWH*NSGPLKSSQCS Trigger: AGAGCACTGGCTGCTCTTCAGAGGTCCTGAATTCAAATGCCAGCAACCACTTGTGATGGGATATGATGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | TGCTTACCCACAAGCAATACTGAGACATTGTTTAGCCAATCAGCGGAAGCTACTAGAAATAAGAGTGCCTaGGGCCTGGTTCGCCCTCTT | + |
Preference number: 4 (lower is better) Translates to: CLPTSNTETLFSQSAEATRNKSA*GLVRPL Trigger: AAGAGGGCGAACCAGGCCTCAGGCACTCTTATTTCT...AGTAGCTTCCGCTGATTGGCTAAACAATGTCTCAGTATTGCTTGTGGGTAAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCATGGCACAGCGAGGGTTaGATTGCCTTTATGGGCATC | + |
Preference number: 4 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSWHSEG*IAFMGI Trigger: GATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCA...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | GCCATTTCTCCAGCTAGAGTGAGGACTTCAACATGTGACTTTGGAAGGATATATACCTCACTTTCCCGCTaGCTCTGGTACTTCCGAACG | + |
Preference number: 4 (lower is better) Translates to: AISPARVRTSTCDFGRIYTSLSR*LWYFRT Trigger: CGTTCGGAAGTACCAGAGTCAGCGGGAAAGTGAGGT...ATATATCCTTCCAAAGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGAGTCTTTCTTCACATTaGTTTAAGGCACGTCTATCC | + |
Preference number: 4 (lower is better) Translates to: CPVMVHTNSQEPASSLLQSLSSH*FKARLS Trigger: GGATAGACGTGCCTTAAAGCAATGTGAAGAAAGACT...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGAAGAACCAGAACTTGTaGAGGAAAATGTATGTTCGG | + |
Preference number: 4 (lower is better) Translates to: CPVMVHTNSQEPASSLLQKNQNL*RKMYVR Trigger: CCGAACATACATTTTCCTCCACAAGTTCTGGTTCTT...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAATTGAGTTGTTGTTGTTaGGCAGATGCAGAGGCACAA | + |
Preference number: 4 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQLSCCC*ADAEAQ Trigger: TTGTGCCTCTGCATCTGCCCAACAACAACAACTCAA...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | AAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCGGCTCAACACACAGAAGAGAATaGCAGAATACAGAGTATAGT | + |
Preference number: 4 (lower is better) Translates to: KGHFREARFSVQHPYGGSTHRRE*QNTEYS Trigger: ACTATACTCTGTATTCTGTCATTCTCTTCTGTGTGT...TGAGCCGCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
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CDS-3UTR TCA 90 bp | AGCGGAAGCTACTTAAAAGTTTCACATTATTCCAGAGACCCTAAGGCACAAGACTCAAGGTCAGAGAGCTaGTGGAAAAGGACAGAGCTG | + |
Preference number: 4 (lower is better) Translates to: SGSYLKVSHYSRDPKAQDSRSES*WKRTEL Trigger: CAGCTCTGTCCTTTTCCATCAGCTCTCTGACCTTGA...GTCTTGTGCCTTAGGGTCTCTGGAATAATGTGAAACTTTTAAGTAGCTTCCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | TGCTTACCCACAAGCAATACTGAGACATTGTTTAGCCAATCAGCGGAAGCTACTACCAGCTGTTTTCAATaGATTCCAAGTGCCGCTCTC | + |
Preference number: 4 (lower is better) Translates to: CLPTSNTETLFSQSAEATTSCFQ*IPSAAL Trigger: GAGAGCGGCACTTGGAATTCATTGAAAACAGCTGGT...AGTAGCTTCCGCTGATTGGCTAAACAATGTCTCAGTATTGCTTGTGGGTAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | AGCGGAAGCTACTTAAAAGTTTCACATTATTCCAGAGACCCTAAGGCACAAGACTTTGGGTGCATTTGCTaGCGTCGTCCTCATCCTTCT | + |
Preference number: 4 (lower is better) Translates to: SGSYLKVSHYSRDPKAQDFGCIC*RRPHPS Trigger: AGAAGGATGAGGACGACGCCAGCAAATGCACCCAAA...GTCTTGTGCCTTAGGGTCTCTGGAATAATGTGAAACTTTTAAGTAGCTTCCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | AGCGGAAGCTACTTAAAAGTTTCACATTATTCCAGAGACCCTAAGGCACAAGACACGTCTATCCCTCGCTaGCAAAGGTCGACCATCTTT | + |
Preference number: 4 (lower is better) Translates to: SGSYLKVSHYSRDPKAQDTSIPR*QRSTIF Trigger: AAAGATGGTCGACCTTTGCCAGCGAGGGATAGACGT...GTCTTGTGCCTTAGGGTCTCTGGAATAATGTGAAACTTTTAAGTAGCTTCCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CAA 72 bp | GAAAATGTATTATCCAACAGCTATGGAAGCCAGATGTaGACAGGCAAAGTGCTGGCAGAGCTGGCTTCTAGA | + |
Preference number: 4 (lower is better) Translates to: ENVLSNSYGSQM*TGKVLAELASR Trigger: TCTAGAAGCCAGCTCTGCCAGCACTTTGCCTGTCAACATCTGGCTTCCATAGCTGTTGGATAATACATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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3UTR CAA 72 bp | TCCAGGCTTCTCATTTCCGATTCATGGCTACATAAATaGATCACTTTGAAGTCGACATGGGACATGAGGGCC | + |
Preference number: 4 (lower is better) Translates to: SRLLISDSWLHK*ITLKSTWDMRA Trigger: GGCCCTCATGTCCCATGTCGACTTCAAAGTGATCAATTTATGTAGCCATGAATCGGAAATGAGAAGCCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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CDS-3UTR TCA 90 bp | CATTCAGCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGAGAAATAAGAGTGCCTaGGGCCTGGTTCGCCCTCTT | + |
Preference number: 4 (lower is better) Translates to: HSATVIRFRQKTDIHTSMRNKSA*GLVRPL Trigger: AAGAGGGCGAACCAGGCCTCAGGCACTCTTATTTCT...CATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR TCA 90 bp | GCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGCACTTATGGCACAGCGAGGGTTaGATTGCCTTTATGGGCATC | + |
Preference number: 4 (lower is better) Translates to: ATVIRFRQKTDIHTSMHLWHSEG*IAFMGI Trigger: GATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCA...TAAGTGCATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR TCA 90 bp | GCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGCACTTACGGGTAACAGTACACTaGTCTTTAGGGGCATCTGCG | + |
Preference number: 4 (lower is better) Translates to: ATVIRFRQKTDIHTSMHLRVTVH*SLGASA Trigger: CGCAGATGCCCCTAAAGATCAGTGTACTGTTACCCG...TAAGTGCATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR TCA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATCGGGTAACAGTACACTaGTCTTTAGGGGCATCTGCG | + |
Preference number: 4 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNRVTVH*SLGASA Trigger: CGCAGATGCCCCTAAAGATCAGTGTACTGTTACCCG...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCAATCTTTAGGGGCATCTaGGTCACATCTTTTTGGCAC | + |
Preference number: 4 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSIFRGI*VTSFWH Trigger: GTGCCAAAAAGATGTGACGCAGATGCCCCTAAAGAT...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | AGTGGCCAACATCAAGTGTGCTGTGTCTGTAGATTGTTTCTAAATCAGTACATTTCAAGGTCAGAGAGCTaGTGGAAAAGGACAGAGCTG | + |
Preference number: 4 (lower is better) Translates to: SGQHQVCCVCRLFLNQYISRSES*WKRTEL Trigger: CAGCTCTGTCCTTTTCCATCAGCTCTCTGACCTTGA...AATGTACTGATTTAGAAACAATCTACAGACACAGCACACTTGATGTTGGCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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CDS-3UTR TCA 90 bp | TTCTTTCACAGGTTTCCAAATCCTTTACATGAGAAGCAGCTGAGTATGCTGTCAACCAGCTGTTTTCAATaGATTCCAAGTGCCGCTCTC | + |
Preference number: 4 (lower is better) Translates to: FFHRFPNPLHEKQLSMLSTSCFQ*IPSAAL Trigger: GAGAGCGGCACTTGGAATTCATTGAAAACAGCTGGT...TGACAGCATACTCAGCTGCTTCTCATGTAAAGGATTTGGAAACCTGTGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | GCCATTTCTCCAGCTAGAGTGAGGACTTCAACATGTGACTTTGGAAGGATATATATCTTTAGGGGCATCTaGGTCACATCTTTTTGGCAC | + |
Preference number: 4 (lower is better) Translates to: AISPARVRTSTCDFGRIYIFRGI*VTSFWH Trigger: GTGCCAAAAAGATGTGACGCAGATGCCCCTAAAGAT...ATATATCCTTCCAAAGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAATGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | TTCCTTAGGGGAAAGGCTGCCTGGGCATTCAAGTATGCAGAAGGAACCATTCAAGTTACCAAAATAGTATaGAGCACTGAAGAACCAGAA | + |
Preference number: 4 (lower is better) Translates to: FLRGKAAWAFKYAEGTIQVTKIV*STEEPE Trigger: TTCTGGTTCTTCAGTGCTGCATACTATTTTGGTAAC...TTGAATGGTTCCTTCTGCATACTTGAATGCCCAGGCAGCCTTTCCCCTAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | AGTGGCCAACATCAAGTGTGCTGTGTCTGTAGATTGTTTCTAAATCAGTACATTACGTCTATCCCTCGCTaGCAAAGGTCGACCATCTTT | + |
Preference number: 4 (lower is better) Translates to: SGQHQVCCVCRLFLNQYITSIPR*QRSTIF Trigger: AAAGATGGTCGACCTTTGCCAGCGAGGGATAGACGT...AATGTACTGATTTAGAAACAATCTACAGACACAGCACACTTGATGTTGGCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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3UTR CAA 72 bp | CCTTGGCTCAATGGCAAACACCATGGACTCAATGGGTaGTCAAGTGAAAATGTATTATCCAACAGCTATGGA | + |
Preference number: 4 (lower is better) Translates to: PWLNGKHHGLNG*SSENVLSNSYG Trigger: TCCATAGCTGTTGGATAATACATTTTCACTTGACAACCCATTGAGTCCATGGTGTTTGCCATTGAGCCAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGTGGTATGAAGGACAATaGGCAGGAGGATCATGCAGA | + |
Preference number: 4 (lower is better) Translates to: EYSLRVILVPKNKVRKPLWYEGQ*AGGSCR Trigger: TCTGCATGATCCTCCTGCTCATTGTCCTTCATACCA...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | GCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGCACTTATGGTATGAAGGACAATaGGCAGGAGGATCATGCAGA | + |
Preference number: 4 (lower is better) Translates to: ATVIRFRQKTDIHTSMHLWYEGQ*AGGSCR Trigger: TCTGCATGATCCTCCTGCTCATTGTCCTTCATACCA...TAAGTGCATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR GCA 90 bp | AGCGGAAGCTACTTAAAAGTTTCACATTATTCCAGAGACCCTAAGGCACAAGACTCAATGAATTCCAAGTaGCGCTCTCTTTTCCTAAGC | + |
Preference number: 4 (lower is better) Translates to: SGSYLKVSHYSRDPKAQDSMNSK*RSLFLS Trigger: GCTTAGGAAAAGAGAGCGGCACTTGGAATTCATTGA...GTCTTGTGCCTTAGGGTCTCTGGAATAATGTGAAACTTTTAAGTAGCTTCCGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | GAACACATCTTAGAGTCTTGTGGTTTTAGGCAGTTTAACACTTTTTCACGAACTAGCGCCGTTTTAATTTaGGTGCATTTGCTGGCGTCG | + |
Preference number: 4 (lower is better) Translates to: EHILESCGFRQFNTFSRTSAVLI*VHLLAS Trigger: CGACGCCAGCAAATGCACCCAAATTAAAACGGCGCT...AGTTCGTGAAAAAGTGTTAAACTGCCTAAAACCACAAGACTCTAAGATGTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | GAGTATTCTCTACGAGTTATTCTGGTTCCCAAGAACAAAGTCAGAAAACCTTTGCGTCAGCCCAGTCCTTaGATGTGCCATTTTGATTTT | + |
Preference number: 4 (lower is better) Translates to: EYSLRVILVPKNKVRKPLRQPSP*MCHFDF Trigger: AAAATCAAAATGGCACATTCAAGGACTGGGCTGACG...CAAAGGTTTTCTGACTTTGTTCTTGGGAACCAGAATAACTCGTAGAGAATACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCAACACACAGAAGAGAATaGCAGAATACAGAGTATAGT | + |
Preference number: 4 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSTHRRE*QNTEYS Trigger: ACTATACTCTGTATTCTGTCATTCTCTTCTGTGTGT...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR TCA 90 bp | TCAGCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGCACAATAGTATGCAGCACTaGAGAACCAGAACTTGTGGA | + |
Preference number: 4 (lower is better) Translates to: SATVIRFRQKTDIHTSMHNSMQH*RTRTCG Trigger: TCCACAAGTTCTGGTTCTTCAGTGCTGCATACTATT...GTGCATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR TCA 90 bp | TTCTTTCACAGGTTTCCAAATCCTTTACATGAGAAGCAGCTGAGTATGCTGTCAAATAGTATGCAGCACTaGAGAACCAGAACTTGTGGA | + |
Preference number: 4 (lower is better) Translates to: FFHRFPNPLHEKQLSMLSNSMQH*RTRTCG Trigger: TCCACAAGTTCTGGTTCTTCAGTGCTGCATACTATT...TGACAGCATACTCAGCTGCTTCTCATGTAAAGGATTTGGAAACCTGTGAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCATCCAAAAGAACCAAATaGCAATGTTTCGAATTCCTG | + |
Preference number: 4 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSSKRTK*QCFEFL Trigger: CAGGAATTCGAAACATTGGCATTTGGTTCTTTTGGA...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | AACCATTCAGCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATCTTTAGGGGCATCTaGGTCACATCTTTTTGGCAC | + |
Preference number: 4 (lower is better) Translates to: NHSATVIRFRQKTDIHTSIFRGI*VTSFWH Trigger: GTGCCAAAAAGATGTGACGCAGATGCCCCTAAAGAT...GCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGCTGAATGGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR CCA 90 bp | AGTGGCCAACATCAAGTGTGCTGTGTCTGTAGATTGTTTCTAAATCAGTACATTTTGAGTTGTTGTTGTTaGGCAGATGCAGAGGCACAA | + |
Preference number: 4 (lower is better) Translates to: SGQHQVCCVCRLFLNQYILSCCC*ADAEAQ Trigger: TTGTGCCTCTGCATCTGCCCAACAACAACAACTCAA...AATGTACTGATTTAGAAACAATCTACAGACACAGCACACTTGATGTTGGCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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CDS-3UTR CCA 90 bp | GCCATTTCTCCAGCTAGAGTGAGGACTTCAACATGTGACTTTGGAAGGATATATAAGAACCAGAACTTGTaGAGGAAAATGTATGTTCGG | + |
Preference number: 4 (lower is better) Translates to: AISPARVRTSTCDFGRIYKNQNL*RKMYVR Trigger: CCGAACATACATTTTCCTCCACAAGTTCTGGTTCTT...ATATATCCTTCCAAAGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | GAACACATCTTAGAGTCTTGTGGTTTTAGGCAGTTTAACACTTTTTCACGAACTCAAAAGCATGTTCAGTaGATTGCTCAGGTTAGTTCC | + |
Preference number: 4 (lower is better) Translates to: EHILESCGFRQFNTFSRTQKHVQ*IAQVSS Trigger: GGAACTAACCTGAGCAATCCACTGAACATGCTTTTG...AGTTCGTGAAAAAGTGTTAAACTGCCTAAAACCACAAGACTCTAAGATGTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CCA 90 bp | AACCATTCAGCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCAAGAACCAGAACTTGTaGAGGAAAATGTATGTTCGG | + |
Preference number: 4 (lower is better) Translates to: NHSATVIRFRQKTDIHTSKNQNL*RKMYVR Trigger: CCGAACATACATTTTCCTCCACAAGTTCTGGTTCTT...GCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGCTGAATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR GCA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATGTTACCAAAATAGTATaGAGCACTGAAGAACCAGAA | + |
Preference number: 4 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNVTKIV*STEEPE Trigger: TTCTGGTTCTTCAGTGCTGCATACTATTTTGGTAAC...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR GCA 90 bp | CATTCAGCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGGTTACCAAAATAGTATaGAGCACTGAAGAACCAGAA | + |
Preference number: 4 (lower is better) Translates to: HSATVIRFRQKTDIHTSMVTKIV*STEEPE Trigger: TTCTGGTTCTTCAGTGCTGCATACTATTTTGGTAAC...CATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGCTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR CAA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCTCTGTTGAGTTGTTGTaGTTGGGCAGATGCAGAGGC | + |
Preference number: 5 (lower is better) Translates to: EPASSLLQPLEEQHNPKPSVELL*LGRCRG Trigger: GCCTCTGCATCTGCCCAACAACAACAACTCAACAGA...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CCA 90 bp | AGGCACGTCTATCCCTCGCTGGCAAAGGTCGACCATCTTTGCTCTTaGATCGAATCGTCTGAATGTGCTGCTCCACTTCCTCGATGTCCT | + |
Preference number: 5 (lower is better) Translates to: RHVYPSLAKVDHLCS*IESSECAAPLPRCP Trigger: AGGACATCGAGGAAGTGGAGCAGCACATTCAGACGATTCGATCCAAGAGCAAAGATGGTCGACCTTTGCCAGCGAGGGATAGACGTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186190.2 ENSMUST00000191471.7 |
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CDS GCA 90 bp | AGCTTCACCTTTTCCCACTCTGTTGAGTTGTTGTTGTTGGGCAGATaGAGAGGCACAAAGGCACCAACGAGAAGCAGCAGAGCGCAGATC | + |
Preference number: 5 (lower is better) Translates to: SFTFSHSVELLLLGR*RGTKAPTRSSRAQI Trigger: GATCTGCGCTCTGCTGCTTCTCGTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS GCA 90 bp | GCTTTAAGGCACGTCTATCCCTCGCTGGCAAAGGTCGACCATCTTTaGTCTTGGATCGAATCGTCTGAATGTGCTGCTCCACTTCCTCGA | + |
Preference number: 5 (lower is better) Translates to: ALRHVYPSLAKVDHL*SWIESSECAAPLPR Trigger: TCGAGGAAGTGGAGCAGCACATTCAGACGATTCGATCCAAGAGCAAAGATGGTCGACCTTTGCCAGCGAGGGATAGACGTGCCTTAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186190.2 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | AAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCGGCTCAGAGCGCCGTTTTAATTaGGGTGCATTTGCTGGCGTC | + |
Preference number: 5 (lower is better) Translates to: KGHFREARFSVQHPYGGSERRFN*GAFAGV Trigger: GACGCCAGCAAATGCACCCAAATTAAAACGGCGCTC...TGAGCCGCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
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CDS-3UTR CAA 90 bp | TGTCCTGTCATGGTCCACACAAACAGCCAAGAGCCAGCATCTTCTCTCCTCCAGTCTGTTGAGTTGTTGTaGTTGGGCAGATGCAGAGGC | + |
Preference number: 5 (lower is better) Translates to: CPVMVHTNSQEPASSLLQSVELL*LGRCRG Trigger: GCCTCTGCATCTGCCCAACAACAACAACTCAACAGA...CTGGAGGAGAGAAGATGCTGGCTCTTGGCTGTTTGTGTGGACCATGACAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS TCA 90 bp | ACTGAGGCGCGAGACTGTAGATCATGTAGCTGGTATGAAGGACAATaGGCAGGAGGATCATGCAGAGAAATAAGAGTGCCTGAGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: TEARDCRSCSWYEGQ*AGGSCREIRVPEAW Trigger: CCAGGCCTCAGGCACTCTTATTTCTCTGCATGATCCTCCTGCTCATTGTCCTTCATACCAGCTACATGATCTACAGTCTCGCGCCTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000190195.2 ENSMUST00000191471.7 |
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CDS CCA 90 bp | CAAACAGGAGCTTCACCTTTTCCCACTCTGTTGAGTTGTTGTTGTTaGGCAGATGCAGAGGCACAAAGGCACCAACGAGAAGCAGCAGAG | + |
Preference number: 5 (lower is better) Translates to: QTGASPFPTLLSCCC*ADAEAQRHQREAAE Trigger: CTCTGCTGCTTCTCGTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | AAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCGGCTCATTAATTTGGGTGCATTaGCTGGCGTCGTCCTCATCC | + |
Preference number: 5 (lower is better) Translates to: KGHFREARFSVQHPYGGSLIWVH*LASSSS Trigger: GGATGAGGACGACGCCAGCAAATGCACCCAAATTAA...TGAGCCGCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
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CDS TCA 90 bp | CTCGCTGGCAAAGGTCGACCATCTTTGCTCTTGGATCGAATCGTCTaGATGTGCTGCTCCACTTCCTCGATGTCCTTGAATGTGCCATTT | + |
Preference number: 5 (lower is better) Translates to: LAGKGRPSLLLDRIV*MCCSTSSMSLNVPF Trigger: AAATGGCACATTCAAGGACATCGAGGAAGTGGAGCAGCACATTCAGACGATTCGATCCAAGAGCAAAGATGGTCGACCTTTGCCAGCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186190.2 |
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CDS TCA 90 bp | AGTTCCAAGGTCTTCAAACAGGAGCTTCACCTTTTCCCACTCTGTTaGGTTGTTGTTGTTGGGCAGATGCAGAGGCACAAAGGCACCAAC | + |
Preference number: 5 (lower is better) Translates to: SSKVFKQELHLFPLC*VVVVGQMQRHKGTN Trigger: GTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTGAAGACCTTGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | GAGCCAGCATCTTCTCTCCTCCAGCCCTTAGAGGAGCAACATAACCCCAAGCCCGTGCTTCTAGTGCCTTaGATTAGGTTTAAAGGTAAT | + |
Preference number: 5 (lower is better) Translates to: EPASSLLQPLEEQHNPKPVLLVP*IRFKGN Trigger: ATTACCTTTAAACCTAATCAAAGGCACTAGAAGCAC...GGGCTTGGGGTTATGTTGCTCCTCTAAGGGCTGGAGGAGAGAAGATGCTGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | AAAGGTCACTTCAGAGAAGCCAGGTTCAGTGTTCAGCACCCATATGGCGGCTCAAATCCCAAAGTGTACTaGAGCGCCGTTTTAATTTGG | + |
Preference number: 5 (lower is better) Translates to: KGHFREARFSVQHPYGGSNPKVY*SAVLIW Trigger: CCAAATTAAAACGGCGCTCAAGTACACTTTGGGATT...TGAGCCGCCATATGGGTGCTGAACACTGAACCTGGCTTCTCTGAAGTGACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186096.7 |
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CDS-3UTR CAA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCATCCCACTCTGTTGAGTaGTTGTTGTTGGGCAGATGC | + |
Preference number: 5 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSSHSVE*LLLGRC Trigger: GCATCTGCCCAACAACAACAACTCAACAGAGTGGGA...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | CAAGAACAAAGTCAGAAAACCTTTGCAATGTGCAGGTGCACATGGAAGCAGTCATTGGCACAGCGAGGGTaGAATTGCCTTTATGGGCAT | + |
Preference number: 5 (lower is better) Translates to: QEQSQKTFAMCRCTWKQSLAQRG*NCLYGH Trigger: ATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCAA...TGACTGCTTCCATGTGCACCTGCACATTGCAAAGGTTTTCTGACTTTGTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | GCCATTTCTCCAGCTAGAGTGAGGACTTCAACATGTGACTTTGGAAGGATATATTCCCACTCTGTTGAGTaGTTGTTGTTGGGCAGATGC | + |
Preference number: 5 (lower is better) Translates to: AISPARVRTSTCDFGRIYSHSVE*LLLGRC Trigger: GCATCTGCCCAACAACAACAACTCAACAGAGTGGGA...ATATATCCTTCCAAAGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS GCA 90 bp | TCCGATCAAGAACACCACGAGAAAGGCCCAGTTACCAAAATAGTATaGAGCACTGAAGAACCAGAACTTGTGGAGGAAAATGTATGTTCG | + |
Preference number: 5 (lower is better) Translates to: SDQEHHEKGPVTKIV*STEEPELVEENVCS Trigger: CGAACATACATTTTCCTCCACAAGTTCTGGTTCTTCAGTGCTGCATACTATTTTGGTAACTGGGCCTTTCTCGTGGTGTTCTTGATCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | TTCTTTCACAGGTTTCCAAATCCTTTACATGAGAAGCAGCTGAGTATGCTGTCATTAATTTGGGTGCATTaGCTGGCGTCGTCCTCATCC | + |
Preference number: 5 (lower is better) Translates to: FFHRFPNPLHEKQLSMLSLIWVH*LASSSS Trigger: GGATGAGGACGACGCCAGCAAATGCACCCAAATTAA...TGACAGCATACTCAGCTGCTTCTCATGTAAAGGATTTGGAAACCTGTGAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATGAGCGCCGTTTTAATTaGGGTGCATTTGCTGGCGTC | + |
Preference number: 5 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNERRFN*GAFAGV Trigger: GACGCCAGCAAATGCACCCAAATTAAAACGGCGCTC...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | TTCTTTCACAGGTTTCCAAATCCTTTACATGAGAAGCAGCTGAGTATGCTGTCACCTTTTCCCACTCTGTaGAGTTGTTGTTGTTGGGCA | + |
Preference number: 5 (lower is better) Translates to: FFHRFPNPLHEKQLSMLSPFPTL*SCCCWA Trigger: TGCCCAACAACAACAACTCAACAGAGTGGGAAAAGG...TGACAGCATACTCAGCTGCTTCTCATGTAAAGGATTTGGAAACCTGTGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | TTCTTTCACAGGTTTCCAAATCCTTTACATGAGAAGCAGCTGAGTATGCTGTCAACAGCGAGGGTTGAATaGCCTTTATGGGCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: FFHRFPNPLHEKQLSMLSTARVE*PLWASE Trigger: TTCTGATGCCCATAAAGGCAATTCAACCCTCGCTGT...TGACAGCATACTCAGCTGCTTCTCATGTAAAGGATTTGGAAACCTGTGAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | GCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGCACTTATTGGCACAGCGAGGGTaGAATTGCCTTTATGGGCAT | + |
Preference number: 5 (lower is better) Translates to: ATVIRFRQKTDIHTSMHLLAQRG*NCLYGH Trigger: ATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCAA...TAAGTGCATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR CAA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATTTGGCACAGCGAGGGTaGAATTGCCTTTATGGGCAT | + |
Preference number: 5 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNLAQRG*NCLYGH Trigger: ATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCAA...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS TCA 90 bp | ACGGCTCATCATCACTTAAGTCCGAATCTTCATCCACTCCTTCTATaGCTGACTTCTTCCCTTTACAGCAGGATACAATTAATCCGATCA | + |
Preference number: 5 (lower is better) Translates to: TAHHHLSPNLHPLLL*LTSSLYSRIQLIRS Trigger: TGATCGGATTAATTGTATCCTGCTGTAAAGGGAAGAAGTCAGTCATAGAAGGAGTGGATGAAGATTCGGACTTAAGTGATGATGAGCCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | GAACACATCTTAGAGTCTTGTGGTTTTAGGCAGTTTAACACTTTTTCACGAACTTTAATTTGGGTGCATTaGCTGGCGTCGTCCTCATCC | + |
Preference number: 5 (lower is better) Translates to: EHILESCGFRQFNTFSRTLIWVH*LASSSS Trigger: GGATGAGGACGACGCCAGCAAATGCACCCAAATTAA...AGTTCGTGAAAAAGTGTTAAACTGCCTAAAACCACAAGACTCTAAGATGTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | GCCATTTCTCCAGCTAGAGTGAGGACTTCAACATGTGACTTTGGAAGGATATATAATCCCAAAGTGTACTaGAGCGCCGTTTTAATTTGG | + |
Preference number: 5 (lower is better) Translates to: AISPARVRTSTCDFGRIYNPKVY*SAVLIW Trigger: CCAAATTAAAACGGCGCTCAAGTACACTTTGGGATT...ATATATCCTTCCAAAGTCACATGTTGAAGTCCTCACTCTAGCTGGAGAAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | AGTGGCCAACATCAAGTGTGCTGTGTCTGTAGATTGTTTCTAAATCAGTACATTCCTTTTCCCACTCTGTaGAGTTGTTGTTGTTGGGCA | + |
Preference number: 5 (lower is better) Translates to: SGQHQVCCVCRLFLNQYIPFPTL*SCCCWA Trigger: TGCCCAACAACAACAACTCAACAGAGTGGGAAAAGG...AATGTACTGATTTAGAAACAATCTACAGACACAGCACACTTGATGTTGGCCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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CDS-3UTR CAA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATAAAGGTCGACCATCTTaGCTCTTGGATCGAATCGTC | + |
Preference number: 5 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNKGRPS*LLDRIV Trigger: GACGATTCGATCCAAGAGCAAAGATGGTCGACCTTT...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | CATTCAGCGACAGTAATAAGATTCAGGCAGAAAACTGACATACATACAAGCATGACAGCGAGGGTTGAATaGCCTTTATGGGCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: HSATVIRFRQKTDIHTSMTARVE*PLWASE Trigger: TTCTGATGCCCATAAAGGCAATTCAACCCTCGCTGT...CATGCTTGTATGTATGTCAGTTTTCTGCCTGAATCTTATTACTGTCGCTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS-3UTR CAA 90 bp | GAACACATCTTAGAGTCTTGTGGTTTTAGGCAGTTTAACACTTTTTCACGAACTACAGCGAGGGTTGAATaGCCTTTATGGGCATCAGAA | + |
Preference number: 5 (lower is better) Translates to: EHILESCGFRQFNTFSRTTARVE*PLWASE Trigger: TTCTGATGCCCATAAAGGCAATTCAACCCTCGCTGT...AGTTCGTGAAAAAGTGTTAAACTGCCTAAAACCACAAGACTCTAAGATGTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | AGGAACCATTCAAGTACGGCTATGAGGAATCACTCATGTAAATACAGAGGAAATAATCCCAAAGTGTACTaGAGCGCCGTTTTAATTTGG | + |
Preference number: 5 (lower is better) Translates to: RNHSSTAMRNHSCKYRGNNPKVY*SAVLIW Trigger: CCAAATTAAAACGGCGCTCAAGTACACTTTGGGATT...ATTTCCTCTGTATTTACATGAGTGATTCCTCATAGCCGTACTTGAATGGTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS-3UTR CAA 90 bp | AGTGGCCAACATCAAGTGTGCTGTGTCTGTAGATTGTTTCTAAATCAGTACATTGTGCTTCTAGTGCCTTaGATTAGGTTTAAAGGTAAT | + |
Preference number: 5 (lower is better) Translates to: SGQHQVCCVCRLFLNQYIVLLVP*IRFKGN Trigger: ATTACCTTTAAACCTAATCAAAGGCACTAGAAGCAC...AATGTACTGATTTAGAAACAATCTACAGACACAGCACACTTGATGTTGGCCACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095062.10 |
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CDS TCA 72 bp | AGAGAGCTGATGGAAAAGGACAGAGCTGCCAGGCCTTaGCCAGTTCCAAGGTCTTCAAACAGGAGCTTCACC | + |
Preference number: 6 (lower is better) Translates to: RELMEKDRAARP*PVPRSSNRSFT Trigger: GGTGAAGCTCCTGTTTGAAGACCTTGGAACTGGTCAAGGCCTGGCAGCTCTGTCCTTTTCCATCAGCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS GCA 72 bp | CACGTCTATCCCTCGCTGGCAAAGGTCGACCATCTTTaGTCTTGGATCGAATCGTCTGAATGTGCTGCTCCA | + |
Preference number: 6 (lower is better) Translates to: HVYPSLAKVDHL*SWIESSECAAP Trigger: TGGAGCAGCACATTCAGACGATTCGATCCAAGAGCAAAGATGGTCGACCTTTGCCAGCGAGGGATAGACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186190.2 ENSMUST00000191471.7 |
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CDS CAA 72 bp | CAGAGAGCTGATGGAAAAGGACAGAGCTGCCAGGCCTaGACCAGTTCCAAGGTCTTCAAACAGGAGCTTCAC | + |
Preference number: 6 (lower is better) Translates to: QRADGKGQSCQA*TSSKVFKQELH Trigger: GTGAAGCTCCTGTTTGAAGACCTTGGAACTGGTCAAGGCCTGGCAGCTCTGTCCTTTTCCATCAGCTCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS TCA 72 bp | AAAGGTCGACCATCTTTGCTCTTGGATCGAATCGTCTaGATGTGCTGCTCCACTTCCTCGATGTCCTCCGTG | + |
Preference number: 6 (lower is better) Translates to: KGRPSLLLDRIV*MCCSTSSMSSV Trigger: CACGGAGGACATCGAGGAAGTGGAGCAGCACATTCAGACGATTCGATCCAAGAGCAAAGATGGTCGACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CCA 72 bp | TATCCCTCGCTGGCAAAGGTCGACCATCTTTGCTCTTaGATCGAATCGTCTGAATGTGCTGCTCCACTTCCT | + |
Preference number: 6 (lower is better) Translates to: YPSLAKVDHLCS*IESSECAAPLP Trigger: AGGAAGTGGAGCAGCACATTCAGACGATTCGATCCAAGAGCAAAGATGGTCGACCTTTGCCAGCGAGGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186190.2 ENSMUST00000191471.7 |
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CDS CAA 90 bp | ACGAGAAGCAGCAGAGCGCAGATCACAACAAATCCCAAAGTGTACTaGAGCGCCGTTTTAATTTGGGTGCATTTGCTGGCGTCGTCCTCA | + |
Preference number: 6 (lower is better) Translates to: TRSSRAQITTNPKVY*SAVLIWVHLLASSS Trigger: TGAGGACGACGCCAGCAAATGCACCCAAATTAAAACGGCGCTCAAGTACACTTTGGGATTTGTTGTGATCTGCGCTCTGCTGCTTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186096.7 ENSMUST00000191471.7 |
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CDS CAA 90 bp | TCAAACAGGAGCTTCACCTTTTCCCACTCTGTTGAGTTGTTGTTGTaGGGCAGATGCAGAGGCACAAAGGCACCAACGAGAAGCAGCAGA | + |
Preference number: 6 (lower is better) Translates to: SNRSFTFSHSVELLL*GRCRGTKAPTRSSR Trigger: TCTGCTGCTTCTCGTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 90 bp | TCTTCAAACAGGAGCTTCACCTTTTCCCACTCTGTTGAGTTGTTGTaGTTGGGCAGATGCAGAGGCACAAAGGCACCAACGAGAAGCAGC | + |
Preference number: 6 (lower is better) Translates to: SSNRSFTFSHSVELL*LGRCRGTKAPTRSS Trigger: GCTGCTTCTCGTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 90 bp | AGGTCTTCAAACAGGAGCTTCACCTTTTCCCACTCTGTTGAGTTGTaGTTGTTGGGCAGATGCAGAGGCACAAAGGCACCAACGAGAAGC | + |
Preference number: 6 (lower is better) Translates to: RSSNRSFTFSHSVEL*LLGRCRGTKAPTRS Trigger: GCTTCTCGTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTGAAGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 90 bp | CCAAGGTCTTCAAACAGGAGCTTCACCTTTTCCCACTCTGTTGAGTaGTTGTTGTTGGGCAGATGCAGAGGCACAAAGGCACCAACGAGA | + |
Preference number: 6 (lower is better) Translates to: PRSSNRSFTFSHSVE*LLLGRCRGTKAPTR Trigger: TCTCGTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTGAAGACCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 72 bp | AGCTTCACCTTTTCCCACTCTGTTGAGTTGTTGTTGTaGGGCAGATGCAGAGGCACAAAGGCACCAACGAGA | + |
Preference number: 6 (lower is better) Translates to: SFTFSHSVELLL*GRCRGTKAPTR Trigger: TCTCGTTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 72 bp | AACAGGAGCTTCACCTTTTCCCACTCTGTTGAGTTGTaGTTGTTGGGCAGATGCAGAGGCACAAAGGCACCA | + |
Preference number: 6 (lower is better) Translates to: NRSFTFSHSVEL*LLGRCRGTKAP Trigger: TGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 90 bp | CAGTTCCAAGGTCTTCAAACAGGAGCTTCACCTTTTCCCACTCTGTaGAGTTGTTGTTGTTGGGCAGATGCAGAGGCACAAAGGCACCAA | + |
Preference number: 6 (lower is better) Translates to: QFQGLQTGASPFPTL*SCCCWADAEAQRHQ Trigger: TTGGTGCCTTTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTGAAGACCTTGGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 72 bp | AGCAGAGCGCAGATCACAACAAATCCCAAAGTGTACTaGAGCGCCGTTTTAATTTGGGTGCATTTGCTGGCG | + |
Preference number: 6 (lower is better) Translates to: SRAQITTNPKVY*SAVLIWVHLLA Trigger: CGCCAGCAAATGCACCCAAATTAAAACGGCGCTCAAGTACACTTTGGGATTTGTTGTGATCTGCGCTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186096.7 ENSMUST00000191471.7 |
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CDS CAA 72 bp | GGTCTTCAAACAGGAGCTTCACCTTTTCCCACTCTGTaGAGTTGTTGTTGTTGGGCAGATGCAGAGGCACAA | + |
Preference number: 6 (lower is better) Translates to: GLQTGASPFPTL*SCCCWADAEAQ Trigger: TTGTGCCTCTGCATCTGCCCAACAACAACAACTCAACAGAGTGGGAAAAGGTGAAGCTCCTGTTTGAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 90 bp | GCAGATCACAACAAATCCCAAAGTGTACTTGAGCGCCGTTTTAATTaGGGTGCATTTGCTGGCGTCGTCCTCATCCTTCTCTTCGTAGTA | + |
Preference number: 6 (lower is better) Translates to: ADHNKSQSVLERRFN*GAFAGVVLILLFVV Trigger: TACTACGAAGAGAAGGATGAGGACGACGCCAGCAAATGCACCCAAATTAAAACGGCGCTCAAGTACACTTTGGGATTTGTTGTGATCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186096.7 ENSMUST00000191471.7 |
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CDS TCA 72 bp | AAAGGTCGACCATCTTTGCTCTTGGATCGAATCGTCTaGATGTGCTGCTCCACTTCCTCGATGTCCTTGAAT | + |
Preference number: 6 (lower is better) Translates to: KGRPSLLLDRIV*MCCSTSSMSLN Trigger: ATTCAAGGACATCGAGGAAGTGGAGCAGCACATTCAGACGATTCGATCCAAGAGCAAAGATGGTCGACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186190.2 |
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CDS CAA 72 bp | AACAAATCCCAAAGTGTACTTGAGCGCCGTTTTAATTaGGGTGCATTTGCTGGCGTCGTCCTCATCCTTCTC | + |
Preference number: 6 (lower is better) Translates to: NKSQSVLERRFN*GAFAGVVLILL Trigger: GAGAAGGATGAGGACGACGCCAGCAAATGCACCCAAATTAAAACGGCGCTCAAGTACACTTTGGGATTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000186096.7 ENSMUST00000191471.7 |
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CDS TCA 72 bp | ATGAGCAGGAGGATCATGCAGAGAAATAAGAGTGCCTaGGGCCTGGTTCGCCCTCTTCTGATTTTATATAAC | + |
Preference number: 6 (lower is better) Translates to: MSRRIMQRNKSA*GLVRPLLILYN Trigger: GTTATATAAAATCAGAAGAGGGCGAACCAGGCCTCAGGCACTCTTATTTCTCTGCATGATCCTCCTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000190195.2 ENSMUST00000191471.7 |
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CDS TCA 72 bp | GGCATCTGCGTCACATCTTTTTGGCACAGCGAGGGTTaGATTGCCTTTATGGGCATCAGAAGTTATATTGCT | + |
Preference number: 6 (lower is better) Translates to: GICVTSFWHSEG*IAFMGIRSYIA Trigger: AGCAATATAACTTCTGATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCAAAAAGATGTGACGCAGATGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000190195.2 ENSMUST00000191471.7 |
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CDS GCA 72 bp | CTGCGTCACATCTTTTTGGCACAGCGAGGGTTGAATTaGCTTTATGGGCATCAGAAGTTATATTGCTCTCTA | + |
Preference number: 6 (lower is better) Translates to: LRHIFLAQRGLN*LYGHQKLYCSL Trigger: TAGAGAGCAATATAACTTCTGATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCAAAAAGATGTGACGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000190195.2 ENSMUST00000191471.7 |
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CDS GCA 72 bp | GAACACCACGAGAAAGGCCCAGTTACCAAAATAGTATaGAGCACTGAAGAACCAGAACTTGTGGAGGAAAAT | + |
Preference number: 6 (lower is better) Translates to: EHHEKGPVTKIV*STEEPELVEEN Trigger: ATTTTCCTCCACAAGTTCTGGTTCTTCAGTGCTGCATACTATTTTGGTAACTGGGCCTTTCTCGTGGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS CAA 72 bp | TCTGCGTCACATCTTTTTGGCACAGCGAGGGTTGAATaGCCTTTATGGGCATCAGAAGTTATATTGCTCTCT | + |
Preference number: 6 (lower is better) Translates to: SASHLFGTARVE*PLWASEVILLS Trigger: AGAGAGCAATATAACTTCTGATGCCCATAAAGGCAATTCAACCCTCGCTGTGCCAAAAAGATGTGACGCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095062.10 ENSMUST00000190195.2 ENSMUST00000191471.7 |
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CDS GCA 72 bp | ACTTACCACGAGAAAGGCCCAGTTACCAAAATAGTATaGAGCACTGAAGAACCAGAACTTGTGGAGGAAAAT | + |
Preference number: 6 (lower is better) Translates to: TYHEKGPVTKIV*STEEPELVEEN Trigger: ATTTTCCTCCACAAGTTCTGGTTCTTCAGTGCTGCATACTATTTTGGTAACTGGGCCTTTCTCGTGGTAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190195.2 |
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CDS CAA 72 bp | ACTGTTTGTAACAACGGCAAAAGCATGTTCAGTGGATaGCTCAGGTTAGTTCCGAAGATGATGAAACCCGAA | + |
Preference number: 6 (lower is better) Translates to: TVCNNGKSMFSG*LRLVPKMMKPE Trigger: TTCGGGTTTCATCATCTTCGGAACTAACCTGAGCAATCCACTGAACATGCTTTTGCCGTTGTTACAAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS TCA 72 bp | CCGAAGATGATGAAACCCGAATCTATTCCTGCTGAATaGAGAGCTTTATCCAAATTTGACAGGAAGAGAGAA | + |
Preference number: 6 (lower is better) Translates to: PKMMKPESIPAE*RALSKFDRKRE Trigger: TTCTCTCTTCCTGTCAAATTTGGATAAAGCTCTTCATTCAGCAGGAATAGATTCGGGTTTCATCATCTTCGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |
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CDS TCA 72 bp | CATCACTTAAGTCCGAATCTTCATCCACTCCTTCTATaGCTGACTTCTTCCCTTTACAGCAGGATACAATTA | + |
Preference number: 6 (lower is better) Translates to: HHLSPNLHPLLL*LTSSLYSRIQL Trigger: TAATTGTATCCTGCTGTAAAGGGAAGAAGTCAGTCATAGAAGGAGTGGATGAAGATTCGGACTTAAGTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095062.10 ENSMUST00000191471.7 |