Pregenerated sensors for LMBR1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022999Ensembl transcript IDs: ENSMUST00000023736.10
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTTGGTCTCTCCAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTaGTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCTGTCTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: PWSLQWSKALHRIAQ*FGSSGPEARKTCLQ Trigger: CTGGAGACAGGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCACTGGAGAGACCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR CCA 90 bp | ACAGCTACATCTGAAAAGGCAGGAGGCCAGCCGGGTCCCAAACTCTaGCTCAGATTAAGCAACAGTGCAGATGGTCCGTCCCCTCTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: TATSEKAGGQPGPKL*LRLSNSADGPSPLS Trigger: TGACAGAGGGGACGGACCATCTGCACTGTTGCTTAATCTGAGCCAGAGTTTGGGACCCGGCTGGCCTCCTGCCTTTTCAGATGTAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR-3UTR TCA 90 bp | GCCACAGCTACATCTGAAAAGGCAGGAGGCCAGCCGGGTCCCAAACTCTGGCTCTCAGGTTCCAGGTCCTaGGGTGCAGCCCCCTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ATATSEKAGGQPGPKLWLSGSRS*GAAPWG Trigger: GCCCCAGGGGGCTGCACCTCAGGACCTGGAACCTGA...GAGCCAGAGTTTGGGACCCGGCTGGCCTCCTGCCTTTTCAGATGTAGCTGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCTTCCAGGTCCTGAGGTaGAGCCCCCTGGGGCTCACC | + |
|
Preference number: 2 (lower is better) Translates to: TKKTLGSILLLVGAAASSFQVLR*SPLGLT Trigger: GGTGAGCCCCAGGGGGCTGCACCTCAGGACCTGGAA...GGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR-3UTR CCA 90 bp | AGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCTGTCTCAAGCAACAGTGCAGATaGTCCGTCCCCTCTGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: RIAQCFGSSGPEARKTCLKQQCR*SVPSVT Trigger: GGTGACAGAGGGGACGGACCATCTGCACTGTTGCTT...GAGACAGGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGGCTTCAGGCATGGCCTaGAACAGGATTGAGGCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KALHRIAQCFGSSGPEARASGMA*NRIEAD Trigger: ATCTGCCTCAATCCTGTTCCAGGCCATGCCTGAAGC...CCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCATGTGTAAACGTATTTaGGTCCAGGAACTAGAGCGA | + |
|
Preference number: 2 (lower is better) Translates to: TKKTLGSILLLVGAAASSMCKRI*VQELER Trigger: TCGCTCTAGTTCCTGGACCCAAATACGTTTACACAT...GGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR GCA 72 bp | CCTCTGTCACCTACTCTCAGGTTCCAGGTCCTGAGGTaGAGCCCCCTGGGGCTCACCGCCAGGCCTAGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLSPTLRFQVLR*SPLGLTARPRH Trigger: GTGCCTAGGCCTGGCGGTGAGCCCCAGGGGGCTGCACCTCAGGACCTGGAACCTGAGAGTAGGTGACAGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR TCA 72 bp | GCTCCACCAGATGGATGCTCAGGCCACAGCTACATCTaGAAAGGCAGGAGGCCAGCCGGGTCCCAAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: APPDGCSGHSYI*KGRRPAGSQTL Trigger: CAGAGTTTGGGACCCGGCTGGCCTCCTGCCTTTTCAGATGTAGCTGTGGCCTGAGCATCCATCTGGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR GCA 72 bp | CTCCAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTaGTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LQWSKALHRIAQ*FGSSGPEARKT Trigger: GGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCACTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR CCA 72 bp | AGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTaGGCCAGAGGCAAGGAAGACCTGTCTCCAGAACCT | + |
|
Preference number: 3 (lower is better) Translates to: SPPQDSTVLRLF*ARGKEDLSPEP Trigger: AGGTTCTGGAGACAGGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR CCA 72 bp | TCTGAAAAGGCAGGAGGCCAGCCGGGTCCCAAACTCTaGCTCAGATTAAGCAACAGTGCAGATGGTCCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SEKAGGQPGPKL*LRLSNSADGPS Trigger: GGACGGACCATCTGCACTGTTGCTTAATCTGAGCCAGAGTTTGGGACCCGGCTGGCCTCCTGCCTTTTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCAGCAGTCCCACCCACCCTATaGCACATCAAATCATGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ENPGINFIARGCSRLLPAVPPTL*HIKSCK Trigger: TTTACATGATTTGATGTGCAATAGGGTGGGTGGGAC...TGCTGGGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAGGTGCAGCCCCCTGGGGCTCACCGCCAGGCCTAGGCACTGCCCAGTTCCAGCAACTTCCCAGTaGCAGAGAACATGCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VLRCSPLGLTARPRHCPVPATSQ*QRTCGR Trigger: TCGCCCGCATGTTCTCTGTCACTGGGAAGTTGCTGG...AACTGGGCAGTGCCTAGGCCTGGCGGTGAGCCCCAGGGGGCTGCACCTCAGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | GCCCCCTGGGGCTCACCGCCAGGCCTAGGCACTGCCCAGTTCTCTCCTTCTCAGGTCTACAATGGCGGATaGCACCCACACCATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APWGSPPGLGTAQFSPSQVYNGG*HPHHAQ Trigger: CTGGGCATGGTGTGGGTGGCATCCGCCATTGTAGAC...CTGAGAAGGAGAGAACTGGGCAGTGCCTAGGCCTGGCGGTGAGCCCCAGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | GTGGTCCAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGGCAGCATCCTGCATaGCCCGTGGCATGGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VVQSPPQDSTVLRLFWARGQHPA*PVAWQP Trigger: AGGCTGCCATGCCACGGGGCATGCAGGATGCTGCCC...TCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTGGGGCTCACCGCCAGGCCTAGGCACTGCCCAGTTCTCTCCTTCTCAGGATGTAGTAGTTGCGTaGCAACGAGAGCAGCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: APWGSPPGLGTAQFSPSQDVVVA*QREQHL Trigger: GAGGTGCTGCTCTCGTTGCCACGCAACTACTACATC...CTGAGAAGGAGAGAACTGGGCAGTGCCTAGGCCTGGCGGTGAGCCCCAGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTGGGGCTCACCGCCAGGCCTAGGCACTGCCCAGTTCTCTCCTTCTCAGAGGTTCCACAGACCATaGATGAGGGAGCCATTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APWGSPPGLGTAQFSPSQRFHRP*MREPLS Trigger: GCTCAATGGCTCCCTCATCCATGGTCTGTGGAACCT...CTGAGAAGGAGAGAACTGGGCAGTGCCTAGGCCTGGCGGTGAGCCCCAGGGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAGGTGCAGCCCCCTGGGGCTCACCGCCAGGCCTAGGCACTGCCCAGTTTGCAAACAGAAGTATTaGGATGATGCACTCGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLRCSPLGLTARPRHCPVCKQKY*DDALAD Trigger: GTCCGCGAGTGCATCATCTCAATACTTCTGTTTGCA...AACTGGGCAGTGCCTAGGCCTGGCGGTGAGCCCCAGGGGGCTGCACCTCAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | TTATTGCTCGTGGGTGCAGCCGCCTCCTCCCAGCACCCTTGGTCTCTCCAGTGGAGGACCCTCTGTGCCTaGAGAGCCAGGACCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLVGAAASSQHPWSLQWRTLCA*RARTCL Trigger: TAGACAGGTCCTGGCTCTGCAGGCACAGAGGGTCCT...CCACTGGAGAGACCAAGGGTGCTGGGAGGAGGCGGCTGCACCCACGAGCAATAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | CAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCACCTAGGGCAGCATCCTaGATGCCCCGTGGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QWSKALHRIAQCFGSSGPPRAAS*MPRGMA Trigger: TGCCATGCCACGGGGCATGCAGGATGCTGCCCTAGG...TGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | TTATTGCTCGTGGGTGCAGCCGCCTCCTCCCAGCACCCTTGGTCTCTCCAGTGGCCAGCACAAGCAGCGTaGGGAGGATCAACATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLVGAAASSQHPWSLQWPAQAA*GGSTSP Trigger: TGGTGATGTTGATCCTCCTCACGCTGCTTGTGCTGG...CCACTGGAGAGACCAAGGGTGCTGGGAGGAGGCGGCTGCACCCACGAGCAATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | CACCAGATGGATGCTCAGGCCACAGCTACATCTGAAAAGGCAGGAGGCCAGCCGCCAGACAGAGTGTGGTaGGGCCAGCAAAGGCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HQMDAQATATSEKAGGQPPDRVW*GQQRLR Trigger: ACGCAGCCTTTGCTGGCCTCACCACACTCTGTCTGG...CGGCTGGCCTCCTGCCTTTTCAGATGTAGCTGTGGCCTGAGCATCCATCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGATTGGAGAAGGAGGCCTaGCCTAGGGCAGCATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVQSPPQDSTVLRLFWARLEKEA*PRAASC Trigger: GCAGGATGCTGCCCTAGGCCAGGCCTCCTTCTCCAA...TCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | CTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCCCCTCACAGCTGCCGTaGAGGTCTTCACCAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHRIAQCFGSSGPEARKTPSQLP*RSSPDR Trigger: TCTGTCTGGTGAAGACCTTCACGGCAGCTGTGAGGG...GGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGCAGTTCCATGTCCAGTaGCAGCCAGCAGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPVVQSPPQDSTVLRLFWQFHVQ*QPAGGG Trigger: CCCACCTCCTGCTGGCTGCCACTGGACATGGAACTG...CCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCACTGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGCCAGCAAGCACAGCATaGCCAGAGGGTAGCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPVVQSPPQDSTVLRLFWPASTA*PEGSPG Trigger: ACCTGGGCTACCCTCTGGCCATGCTGTGCTTGCTGG...CCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCACTGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | CCAGCACCCTTGGTCTCTCCAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTGTGCCTCCTCAAAGGCTaGGCAGTTCAGCTGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPLVSPVVQSPPQDSTVCLLKG*AVQLFL Trigger: GAGGAACAGCTGAACTGCTCAGCCTTTGAGGAGGCA...CACTGTGCTATCCTGTGGAGGGCTTTGGACCACTGGAGAGACCAAGGGTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | AGCTCCACCAGATGGATGCTCAGGCCACAGCTACATCTGAAAAGGCAGGAGGCCCTCTGCCCTCACAGCTaGCGTGAAGGTCTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSTRWMLRPQLHLKRQEALCPHS*REGLHQ Trigger: CTGGTGAAGACCTTCACGGCAGCTGTGAGGGCAGAG...GGCCTCCTGCCTTTTCAGATGTAGCTGTGGCCTGAGCATCCATCTGGTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | GTGGTCCAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGCAGCCAGCAGGAGGTaGGATTGCAGATTCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVQSPPQDSTVLRLFWARAASRR*DCRFFE Trigger: CTCGAAGAATCTGCAATCCCACCTCCTGCTGGCTGC...TCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCAGCAGCTCCAGGATGTaGACAGCCACGATGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LHRIAQCFGSSGPEARKTSSSRM*TATMRT Trigger: TGTCCTCATCGTGGCTGTCCACATCCTGGAGCTGCT...GGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | CTCAGATTAAGCAACAGTGCAGATGGTCCGTCCCCTCTGTCACCTACTCTCAGGGTTCCGTTGCCAGGCTaGCGCCTTCCGACGCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLSNSADGPSPLSPTLRVPLPG*RLPTLF Trigger: GAAAAGCGTCGGAAGGCGTCAGCCTGGCAACGGAAC...CCTGAGAGTAGGTGACAGAGGGGACGGACCATCTGCACTGTTGCTTAATCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | CTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCGAGGCCAGCAAAGGCTaGGTTGTAGAGGAACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHRIAQCFGSSGPEARKTEASKG*VVEEHD Trigger: ATCGTGTTCCTCTACAACGCAGCCTTTGCTGGCCTC...GGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCGGCTCGGATCAGCTCTaGCCTCACAGCTGCCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKKTLGSILLLVGAAASSGSDQL*PHSCRE Trigger: TTCACGGCAGCTGTGAGGGCAGAGCTGATCCGAGCC...GGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCCAAAGGATCCCAGTTTaGAGAAGGAGGCCTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LHRIAQCFGSSGPEARKTQRIPV*RRRPGL Trigger: TAGGCCAGGCCTCCTTCTCCAAACTGGGATCCTTTG...GGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | CACCAGATGGATGCTCAGGCCACAGCTACATCTGAAAAGGCAGGAGGCCAGCCGACTGGATGTAGTAGTTaGGTGGCAACGAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HQMDAQATATSEKAGGQPTGCSS*VATRAA Trigger: TGCTGCTCTCGTTGCCACGCAACTACTACATCCAGT...CGGCTGGCCTCCTGCCTTTTCAGATGTAGCTGTGGCCTGAGCATCCATCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | AGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCTGTCTCCGTAGAGCGACTCCCTaGTGGCCTTGTCATTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RIAQCFGSSGPEARKTCLRRATP*WPCHCL Trigger: TAGACAATGACAAGGCCAGCAGGGAGTCGCTCTACG...GAGACAGGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | GAACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTTCGCGGACCCTGTCGTaGAACAGCTGTTCTCGCACG | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPWDQFYCSWVQPPPSRTLS*NSCSRT Trigger: CGTGCGAGAACAGCTGTTCCACGACAGGGTCCGCGA...AGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | CTGGCTCAGATTAAGCAACAGTGCAGATGGTCCGTCCCCTCTGTCACCTACTCTCCCAGAGACAGGCAGTaGCAGTCTGTCCAGCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAQIKQQCRWSVPSVTYSPRDRQ*QSVQPK Trigger: TTTGGGCTGGACAGACTGCCACTGCCTGTCTCTGGG...AGAGTAGGTGACAGAGGGGACGGACCATCTGCACTGTTGCTTAATCTGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | AGCTCCACCAGATGGATGCTCAGGCCACAGCTACATCTGAAAAGGCAGGAGGCCACAGAAGTATTGAGATaGTGCACTCGCGGACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTRWMLRPQLHLKRQEATEVLR*CTRGPC Trigger: ACAGGGTCCGCGAGTGCATCATCTCAATACTTCTGT...GGCCTCCTGCCTTTTCAGATGTAGCTGTGGCCTGAGCATCCATCTGGTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | GAACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTGAAGACAGGAAGTGCTaGGCTGAGGACCAGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPWDQFYCSWVQPPPEDRKC*AEDQEA Trigger: TGCCTCCTGGTCCTCAGCTCAGCACTTCCTGTCTTC...AGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGAGACGAGGGACAGATTaGAGAAGAGGAAAACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSPPQDSTVLRLFWARGKRRGTD*RRGKRG Trigger: ACCTCGTTTTCCTCTTCTCCAATCTGTCCCTCGTCT...CTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCCAGGACACCCTTTCTaGAGCCAGCAAAGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKKTLGSILLLVGAAASSPGHPF*SQQSLQ Trigger: CTGAAGGCTTTGCTGGCTCCAGAAAGGGTGTCCTGG...GGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | AGCTCCACCAGATGGATGCTCAGGCCACAGCTACATCTGAAAAGGCAGGAGGCCTGTCATTGTCTACAATaGCGGATGCCACCCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTRWMLRPQLHLKRQEACHCLQ*RMPPTP Trigger: TGGTGTGGGTGGCATCCGCCATTGTAGACAATGACA...GGCCTCCTGCCTTTTCAGATGTAGCTGTGGCCTGAGCATCCATCTGGTGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | GAACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTATCCTGCATGCCCCGTaGCATGGCAGCCTCGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPWDQFYCSWVQPPPILHAP*HGSLVN Trigger: ATTGACGAGGCTGCCATGCCACGGGGCATGCAGGAT...AGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | CCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCACTCAGCAGGCTTCTTaGAGCGGGTCAGGAAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: PRKPWDQFYCSWVQPPPPTQQAS*SGSGRY Trigger: ATATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGT...GGGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | AGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCTGTCTCGTAGAAACCCACCACTaGGGACACCATCAGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIAQCFGSSGPEARKTCLVETHH*GHHQVK Trigger: TTTTACCTGATGGTGTCCTCAGTGGTGGGTTTCTAC...GAGACAGGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | CACCAGATGGATGCTCAGGCCACAGCTACATCTGAAAAGGCAGGAGGCCAGCCGAGACACAGTTCCCAATaGTCTGTGTCATCGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HQMDAQATATSEKAGGQPRHSSQ*SVSSMC Trigger: ACACATCGATGACACAGATCATTGGGAACTGTGTCT...CGGCTGGCCTCCTGCCTTTTCAGATGTAGCTGTGGCCTGAGCATCCATCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | AGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCAGCAATTGCCTAGCCAGTTaGAGCGTCCAAAGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RKPWDQFYCSWVQPPPPSNCLAS*SVQSHP Trigger: TGGGTGACTTTGGACGCTTCAACTGGCTAGGCAATT...GCTGGGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCCAGGCTTCCAAAGAGTaGAGAGCTGTAGAAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRKPWDQFYCSWVQPPPPQASKE*RAVETH Trigger: GTGGGTTTCTACAGCTCTCCACTCTTTGGAAGCCTG...GGGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGAGCCTTCAGACTCTGTaGAGAAATATGCAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPVVQSPPQDSTVLRLFWSLQTL*RNMQRA Trigger: TGCCCTTTGCATATTTCTTCACAGAGTCTGAAGGCT...CCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAGGGCTTTGGACCACTGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR GCA 90 bp | GAACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTGCCAGGACCTGTCTATaGAGCAGTTCCATGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPWDQFYCSWVQPPPARTCL*SSSMSS Trigger: ACTGGACATGGAACTGCTGCATAGACAGGTCCTGGC...AGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | GCCCCCTGGGGCTCACCGCCAGGCCTAGGCACTGCCCAGTTCTCTCCTTCTCAGCCAAAGGATCCCAGTTaGGAGAAGGAGGCCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: APWGSPPGLGTAQFSPSQPKDPS*EKEAWP Trigger: AGGCCAGGCCTCCTTCTCCAAACTGGGATCCTTTGG...CTGAGAAGGAGAGAACTGGGCAGTGCCTAGGCCTGGCGGTGAGCCCCAGGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS TCA 90 bp | CAAGCACAGCATGGCCAGAGGGTAGCCCAGGTTCCGTTGCCAGGCTaGCGCCTTCCGACGCTTTTCCAAGAGGACCCTCTGTGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QAQHGQRVAQVPLPG*RLPTLFQEDPLCLQ Trigger: CTGCAGGCACAGAGGGTCCTCTTGGAAAAGCGTCGGAAGGCGTCAGCCTGGCAACGGAACCTGGGCTACCCTCTGGCCATGCTGTGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS TCA 90 bp | CTACAATGGCGGATGCCACCCACACCATGCCCAGCACAAGCAGCGTaGGGAGGATCAACATCACCACTGTCTCGTAGACCCGGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQWRMPPTPCPAQAA*GGSTSPLSRRPGPG Trigger: TCCTGGGCCGGGTCTACGAGACAGTGGTGATGTTGATCCTCCTCACGCTGCTTGTGCTGGGCATGGTGTGGGTGGCATCCGCCATTGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 90 bp | CAGGCTGACGCCTTCCGACGCTTTTCCAAGAGGACCCTCTGTGCCTaGAGAGCCAGGACCTGTCTATGCAGCAGTTCCATGTCCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QADAFRRFSKRTLCA*RARTCLCSSSMSSG Trigger: GCCACTGGACATGGAACTGCTGCATAGACAGGTCCTGGCTCTGCAGGCACAGAGGGTCCTCTTGGAAAAGCGTCGGAAGGCGTCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 90 bp | CAGTCTGTCCAGCCCAAAGGCTCGGATCAGCTCTGCCCTCACAGCTaGCGTGAAGGTCTTCACCAGACAGAGTGTGGTGAGGCCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QSVQPKGSDQLCPHS*REGLHQTECGEASK Trigger: TTTGCTGGCCTCACCACACTCTGTCTGGTGAAGACCTTCACGGCAGCTGTGAGGGCAGAGCTGATCCGAGCCTTTGGGCTGGACAGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | TTATTGCTCGTGGGTGCAGCCGCCTCCTCCCAGCACCCTTGGTCTCTCCAGTGGCAGCAGGAGGTGGGATaGCAGATTCTTCGAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLVGAAASSQHPWSLQWQQEVG*QILRVR Trigger: TCTGACTCGAAGAATCTGCAATCCCACCTCCTGCTG...CCACTGGAGAGACCAAGGGTGCTGGGAGGAGGCGGCTGCACCCACGAGCAATAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 90 bp | GTAGAGCGACTCCCTGCTGGCCTTGTCATTGTCTACAATGGCGGATaGCACCCACACCATGCCCAGCACAAGCAGCGTGAGGAGGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: VERLPAGLVIVYNGG*HPHHAQHKQREEDQ Trigger: TTGATCCTCCTCACGCTGCTTGTGCTGGGCATGGTGTGGGTGGCATCCGCCATTGTAGACAATGACAAGGCCAGCAGGGAGTCGCTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 90 bp | TTTTCCAAGAGGACCCTCTGTGCCTGCAGAGCCAGGACCTGTCTATaGAGCAGTTCCATGTCCAGTGGCAGCCAGCAGGAGGTGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: FSKRTLCACRARTCL*SSSMSSGSQQEVGL Trigger: CAATCCCACCTCCTGCTGGCTGCCACTGGACATGGAACTGCTGCATAGACAGGTCCTGGCTCTGCAGGCACAGAGGGTCCTCTTGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS CCA 90 bp | GATAGGGGAGGTAGTACTCCCAGAAGTCGTAGAGCGACTCCCTGCTaGCCTTGTCATTGTCTACAATGGCGGATGCCACCCACACCATGC | + |
|
Preference number: 5 (lower is better) Translates to: DRGGSTPRSRRATPC*PCHCLQWRMPPTPC Trigger: GCATGGTGTGGGTGGCATCCGCCATTGTAGACAATGACAAGGCCAGCAGGGAGTCGCTCTACGACTTCTGGGAGTACTACCTCCCCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | ACCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCGAGAGCAGCACCTCGTaGCTGATGATGGAGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TKKTLGSILLLVGAAASSESSTS*LMMEKG Trigger: GCCCTTCTCCATCATCAGCAACGAGGTGCTGCTCTC...GGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | CCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCGACTCCCTGCTGGCCTaGTCATTGTCTACAATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PRKPWDQFYCSWVQPPPPDSLLA*SLSTMA Trigger: CGCCATTGTAGACAATGACAAGGCCAGCAGGGAGTC...GGGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCACCCTTGGTCTCTCCAGTGGTCCAAAGCCCTCCACAGGATAGCACAGTGAAATTGCCTAGCCAGTaGAAGCGTCCAAAGTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PAPLVSPVVQSPPQDSTVKLPSQ*KRPKSP Trigger: GGGTGACTTTGGACGCTTCAACTGGCTAGGCAATTT...CACTGTGCTATCCTGTGGAGGGCTTTGGACCACTGGAGAGACCAAGGGTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | GAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCAGCAAACTCAGCAGGCTTCTaGAAGCGGGTCAGGAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: ENPGINFIARGCSRLLPANSAGF*KRVRKI Trigger: TATCTTCCTGACCCGCTTCAAGAAGCCTGCTGAGTT...TGCTGGGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS TCA 90 bp | AGGCTGCGTTGTAGAGGAACACGATGTAGAAATTGCCTAGCCAGTTaGAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGTGTCAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RLRCRGTRCRNCLAS*SVQSHPAGQSVSGQ Trigger: TTGGCCTGACACGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTAGGCAATTTCTACATCGTGTTCCTCTACAACGCAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | CCAAGAAAACCCTGGGATCAATTTTATTGCTCGTGGGTGCAGCCGCCTCCTCCCAGCTCCAGCGCAATCTaGTTAACTGTGGCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRKPWDQFYCSWVQPPPPSSSAI*LTVASS Trigger: TGAAGATGCCACAGTTAACAAGATTGCGCTGGAGCT...GGGAGGAGGCGGCTGCACCCACGAGCAATAAAATTGATCCCAGGGTTTTCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS-3UTR CAA 90 bp | CTCCACAGGATAGCACAGTGCTTCGGCTCTTCTGGGCCAGAGGCAAGGAAGACCAGAGGATGTAGAGTGTaGCAAACAGAAGTATTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHRIAQCFGSSGPEARKTRGCRV*QTEVLR Trigger: TCTCAATACTTCTGTTTGCAACACTCTACATCCTCT...GGTCTTCCTTGCCTCTGGCCCAGAAGAGCCGAAGCACTGTGCTATCCTGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS CCA 72 bp | GGACAGACAGGCCCGTCAGCACCAGCAAGCACAGCATaGCCAGAGGGTAGCCCAGGTTCCGTTGCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQTGPSAPASTA*PEGSPGSVARL Trigger: CAGCCTGGCAACGGAACCTGGGCTACCCTCTGGCCATGCTGTGCTTGCTGGTGCTGACGGGCCTGTCTGTCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 72 bp | AGGACCCTCTGTGCCTGCAGAGCCAGGACCTGTCTATaGAGCAGTTCCATGTCCAGTGGCAGCCAGCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTLCACRARTCL*SSSMSSGSQQE Trigger: CTCCTGCTGGCTGCCACTGGACATGGAACTGCTGCATAGACAGGTCCTGGCTCTGCAGGCACAGAGGGTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 72 bp | CAGCCCAAAGGCTCGGATCAGCTCTGCCCTCACAGCTaGCGTGAAGGTCTTCACCAGACAGAGTGTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QPKGSDQLCPHS*REGLHQTECGE Trigger: CTCACCACACTCTGTCTGGTGAAGACCTTCACGGCAGCTGTGAGGGCAGAGCTGATCCGAGCCTTTGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 72 bp | TGGCAGTCTGTCCAGCCCAAAGGCTCGGATCAGCTCTaGCCTCACAGCTGCCGTGAAGGTCTTCACCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: WQSVQPKGSDQL*PHSCREGLHQT Trigger: TGTCTGGTGAAGACCTTCACGGCAGCTGTGAGGGCAGAGCTGATCCGAGCCTTTGGGCTGGACAGACTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS CCA 72 bp | GCAGCAGTTCCATGTCCAGTGGCAGCCAGCAGGAGGTaGGATTGCAGATTCTTCGAGTCAGAGCTGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAVPCPVAASRR*DCRFFESELPP Trigger: AGGAGGCAGCTCTGACTCGAAGAATCTGCAATCCCACCTCCTGCTGGCTGCCACTGGACATGGAACTGCTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 72 bp | GGAGGTAGTACTCCCAGAAGTCGTAGAGCGACTCCCTaGTGGCCTTGTCATTGTCTACAATGGCGGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGSTPRSRRATP*WPCHCLQWRMP Trigger: TGGCATCCGCCATTGTAGACAATGACAAGGCCAGCAGGGAGTCGCTCTACGACTTCTGGGAGTACTACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS TCA 72 bp | TGTCAGGCCAAGAGTTCTAGAGAAGACAGGAAGTGCTaGGCTGAGGACCAGGAGGCAGACACAGTTCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: CQAKSSREDRKC*AEDQEADTVPN Trigger: ATTGGGAACTGTGTCTGCCTCCTGGTCCTCAGCTCAGCACTTCCTGTCTTCTCTAGAACTCTTGGCCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS GCA 72 bp | ACACAGTTCCCAATGATCTGTGTCATCGATGTGTCATaGCACCTAGGCCTCAGGCTTCCAAAGAGTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TQFPMICVIDVS*HLGLRLPKSGE Trigger: CTCTCCACTCTTTGGAAGCCTGAGGCCTAGGTGGCATGACACATCGATGACACAGATCATTGGGAACTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS TCA 72 bp | TGTAGAGGAACACGATGTAGAAATTGCCTAGCCAGTTaGAGCGTCCAAAGTCACCCAGCAGGTCAAAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CRGTRCRNCLAS*SVQSHPAGQSV Trigger: CACGCTTTGACCTGCTGGGTGACTTTGGACGCTTCAACTGGCTAGGCAATTTCTACATCGTGTTCCTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||
| CDS TCA 72 bp | AGAGGATGTAGAGTGTTGCAAACAGAAGTATTGAGATaGTGCACTCGCGGACCCTGTCGTGGAACAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RGCRVLQTEVLR*CTRGPCRGTAV Trigger: AACAGCTGTTCCACGACAGGGTCCGCGAGTGCATCATCTCAATACTTCTGTTTGCAACACTCTACATCCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023736.10 |
||