Pregenerated sensors for LMBR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010721Ensembl transcript IDs: ENSMUST00000055195.11, ENSMUST00000179191.6, ENSMUST00000196321.5, ENSMUST00000198105.5, ENSMUST00000200149.2, ENSMUST00000200564.5
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCTACTGTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTaGCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAA | + |
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Preference number: 1 (lower is better) Translates to: SPTVLGQSRSGNNCC*HHAHSPIGGEQQTQ Trigger: TTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR CCA 90 bp | CAATGGGAATCTGTGCTGCTGACTATCAGGATCACCTACTGTGCTTaGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCATGCCCA | + |
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Preference number: 1 (lower is better) Translates to: QWESVLLTIRITYCA*PKQKWQQLLLPPCP Trigger: TGGGCATGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGATCCTGATAGTCAGCAGCACAGATTCCCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR GCA 90 bp | GACACCTTACCTTGCAGAGCTCTGTTTGGTTGTTGGCAAATGGTGTaGACCGAAGTGACTGCAGCAGAAAACTCTGACCTCTCCCTGACT | + |
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Preference number: 1 (lower is better) Translates to: DTLPCRALFGCWQMV*TEVTAAENSDLSLT Trigger: AGTCAGGGAGAGGTCAGAGTTTTCTGCTGCAGTCACTTCGGTGCACACCATTTGCCAACAACCAAACAGAGCTCTGCAAGGTAAGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR GCA 90 bp | GAATCAATGGGAATCTGTGCTGCTGACTATCAGGATCACCTACTGTaGTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCATG | + |
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Preference number: 1 (lower is better) Translates to: ESMGICAADYQDHLL*LAKAEVATTAAATM Trigger: CATGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGATCCTGATAGTCAGCAGCACAGATTCCCATTGATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR TCA 90 bp | CCAAATCTGAGTCCTCTGAAAGCAAAGCTAGTGCTCTTTAACTGCTaGGCCATCTCTCCAGCCATTCCACCTCCAACCCTCATTTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: PNLSPLKAKLVLFNC*AISPAIPPPTLISS Trigger: AGAGGAAATGAGGGTTGGAGGTGGAATGGCTGGAGAGATGGCTCAGCAGTTAAAGAGCACTAGCTTTGCTTTCAGAGGACTCAGATTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR CCA 90 bp | TATGGAAGTGTTTTTCCTTCACCATGTGCCTGCAGTCAGTGCCCATaGAGGTCTGAAAGGGTATTTAATCCCCTGGGACTAGAGTCACTG | + |
|
Preference number: 1 (lower is better) Translates to: YGSVFPSPCACSQCP*RSERVFNPLGLESL Trigger: CAGTGACTCTAGTCCCAGGGGATTAAATACCCTTTCAGACCTCCATGGGCACTGACTGCAGGCACATGGTGAAGGAAAAACACTTCCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR TCA 90 bp | TCCTGGGGTGGAGACTTAAGGTGGTGTATGAGAGGCACCGAAGCCTaGAAAAGCAATTTCTGTCTTTGGGTTACACACATACAACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: SWGGDLRWCMRGTEA*KSNFCLWVTHIQQA Trigger: TGCTTGTTGTATGTGTGTAACCCAAAGACAGAAATTGCTTTTTCAGGCTTCGGTGCCTCTCATACACCACCTTAAGTCTCCACCCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
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| 3UTR GCA 90 bp | TTTATGTATGGAAGTGTTTTTCCTTCACCATGTGCCTGCAGTCAGTaGCCATGGAGGTCTGAAAGGGTATTTAATCCCCTGGGACTAGAG | + |
|
Preference number: 1 (lower is better) Translates to: FMYGSVFPSPCACSQ*PWRSERVFNPLGLE Trigger: CTCTAGTCCCAGGGGATTAAATACCCTTTCAGACCTCCATGGGCACTGACTGCAGGCACATGGTGAAGGAAAAACACTTCCATACATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR CCA 90 bp | CTGACCCACTCAGAGCCACAGCACCAAGTTTCCTTAAAACTAACCTaGAGTATCAGGGGATGCCATGGTGTAAATAAAGATGTGGACTCA | + |
|
Preference number: 1 (lower is better) Translates to: LTHSEPQHQVSLKLT*SIRGCHGVNKDVDS Trigger: TGAGTCCACATCTTTATTTACACCATGGCATCCCCTGATACTCCAGGTTAGTTTTAAGGAAACTTGGTGCTGTGGCTCTGAGTGGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR GCA 90 bp | CCACAGCACCAAGTTTCCTTAAAACTAACCTGGAGTATCAGGGGATaGCATGGTGTAAATAAAGATGTGGACTCAATGGCTTATAAACAT | + |
|
Preference number: 1 (lower is better) Translates to: PQHQVSLKLTWSIRG*HGVNKDVDSMAYKH Trigger: ATGTTTATAAGCCATTGAGTCCACATCTTTATTTACACCATGGCATCCCCTGATACTCCAGGTTAGTTTTAAGGAAACTTGGTGCTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR GCA 90 bp | GGCAACAACTGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGGTGGTGACCACGCAGTaGATCAACCACAGAAGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: GNNCCCHHAHSPIGGEQQVVTTQ*INHRRP Trigger: GGGCCTTCTGTGGTTGATGCACTGCGTGGTCACCAC...CTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCAGTTGTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR GCA 90 bp | GGCAACAACTGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGCCTTCACCATGTGCCTaGAGTCAGTGCCCATGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: GNNCCCHHAHSPIGGEQQPSPCA*SQCPWR Trigger: CCTCCATGGGCACTGACTGCAGGCACATGGTGAAGG...CTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCAGTTGTTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | GGCAACAACTGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACTCTGACCTCTCCCTaGCTTGCTCTGCTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: GNNCCCHHAHSPIGGEQQTLTSP*LALLQS Trigger: GCTCTGAAGCAGAGCAAGTCAGGGAGAGGTCAGAGT...CTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCAGTTGTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAAACCCTCAAAGGGTGGTaGCCACGCAGTGCATCAACC | + |
|
Preference number: 2 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQTLKGW*PRSAST Trigger: GGTTGATGCACTGCGTGGTCACCACCCTTTGAGGGT...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR GCA 90 bp | GGCAACAACTGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGATGGGAGCTCTTGTCTaGAGAGCTTTCTGCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: GNNCCCHHAHSPIGGEQQMGALV*RAFCTL Trigger: CAGAGTGCAGAAAGCTCTGCAGACAAGAGCTCCCAT...CTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCAGTTGTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAACCAGACCCACCAGAATaGACACTGTCTATGGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQPDPPE*TLSMGM Trigger: CATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGG...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAAGTGCTCTTTAACTGCTaGGCCATCTCTCCAGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQVLFNC*AISPAI Trigger: AATGGCTGGAGAGATGGCTCAGCAGTTAAAGAGCAC...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | ATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGCTTTGGGGCACCAGATaGCTTTCAGGCAGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: ISYELHLLHLPFCGDPDLLWGTR*LSGRLL Trigger: CAGAAGCCTGCCTGAAAGTCATCTGGTGCCCCAAAG...CAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
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| 3UTR-3UTR TCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCCAGGTGAGTGACCAGTaGCCCTCAAAGGGTGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: GILLPLPLECYKENTTMPQVSDQ*PSKGGD Trigger: GTCACCACCCTTTGAGGGTCACTGGTCACTCACCTG...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR CAA 90 bp | TCAATGGGAATCTGTGCTGCTGACTATCAGGATCACCTACTGTGCTaGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCATGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SMGICAADYQDHLLC*AKAEVATTAAATMP Trigger: GGGCATGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGATCCTGATAGTCAGCAGCACAGATTCCCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | CATATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCCAGACCCACCAGAATaGACACTGTCTATGGGAATG | + |
|
Preference number: 2 (lower is better) Translates to: HISYELHLLHLPFCGDPDPDPPE*TLSMGM Trigger: CATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGG...GTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
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| 3UTR-3UTR TCA 90 bp | TATGAAGCCTCAGCATGCTGCTGTCCTTTCGTGAAGTTCTGTATCAGCCAGCCTACTCTGACCTCTCCCTaGCTTGCTCTGCTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YEASACCCPFVKFCISQPTLTSP*LALLQS Trigger: GCTCTGAAGCAGAGCAAGTCAGGGAGAGGTCAGAGT...AGGCTGGCTGATACAGAACTTCACGAAAGGACAGCAGCATGCTGAGGCTTCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCCCAGACCCACCAGAATaGACACTGTCTATGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: GFCLQNQASHGVKQKPKGPDPPE*TLSMGM Trigger: CATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGG...GCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| 3UTR-3UTR TCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCGTTTCCAGGACCTTGTaGAAATGCTTTGGGGCACCA | + |
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Preference number: 2 (lower is better) Translates to: GILLPLPLECYKENTTMPVSRTL*KCFGAP Trigger: TGGTGCCCCAAAGCATTTTCACAAGGTCCTGGAAAC...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | ATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGAGAGGCACCGAAGCCTaGAAAAGCAATTTCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: ISYELHLLHLPFCGDPDLRGTEA*KSNFCL Trigger: AAGACAGAAATTGCTTTTTCAGGCTTCGGTGCCTCT...CAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
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| 3UTR-3UTR GCA 90 bp | ATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGAGTTGTAAGTGCTTATaGGAAAGGGCACTGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: ISYELHLLHLPFCGDPDLSCKCL*ERALSA Trigger: AGCTGACAGTGCCCTTTCGCATAAGCACTTACAACT...CAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
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| 3UTR-3UTR GCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCGAAGCCTCAGCATGCTaGTGTCCTTTCGTGAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: GILLPLPLECYKENTTMPEASAC*CPFVKF Trigger: GAACTTCACGAAAGGACAGCAGCATGCTGAGGCTTC...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGCCAGACCCACCAGAATaGACACTGTCTATGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: AGFCLQNQASHGVKQKPKPDPPE*TLSMGM Trigger: CATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGG...CTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| 3UTR-3UTR GCA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTTCAGTTGTCGGGACTTaGTGTAGAGTGCTACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: QASHGVKQKPKGVRVFTSSVVGT*CRVLLR Trigger: CCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGA...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCTTCAGTTGTCGGGACTTaGTGTAGAGTGCTACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: AVISGQSENSQETQMTSASVVGT*CRVLLR Trigger: CCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGA...AGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| 3UTR-3UTR TCA 90 bp | CATATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACACTGGCACTGTGCTGTaGAAAGTATTATCAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: HISYELHLLHLPFCGDPDTGTVL*KVLSGT Trigger: TGTACCTGATAATACTTTTCACAGCACAGTGCCAGT...GTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
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| 3UTR-3UTR TCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCCCTGAATCACACATGTaGAAGGAAAGAGCTGACTAC | + |
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Preference number: 2 (lower is better) Translates to: GILLPLPLECYKENTTMPPESHM*KERADY Trigger: GTAGTCAGCTCTTTCCTTTCACATGTGTGATTCAGG...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR CCA 90 bp | ATCACCTACTGTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCATCCTTAAAACTAACCTaGAGTATCAGGGGATGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ITYCAWPKQKWQQLLLPPSLKLT*SIRGCH Trigger: ATGGCATCCCCTGATACTCCAGGTTAGTTTTAAGGA...TGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR TCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCACTGGCACTGTGCTGTaGAAAGTATTATCAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: GILLPLPLECYKENTTMPTGTVL*KVLSGT Trigger: TGTACCTGATAATACTTTTCACAGCACAGTGCCAGT...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTTCAGTTGTCGGGACTTaGTGTAGAGTGCTACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: KAVISGQSENSQETQMTSSVVGT*CRVLLR Trigger: CCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGA...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| 3UTR-3UTR GCA 90 bp | CATACAGCCTATAAGGCAAAGTCTAAGGTGTGTACAACACTGGCACTGTGCTGTTCAGTTGTCGGGACTTaGTGTAGAGTGCTACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: HTAYKAKSKVCTTLALCCSVVGT*CRVLLR Trigger: CCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGA...ACAGCACAGTGCCAGTGTTGTACACACCTTAGACTTTGCCTTATAGGCTGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAATCAGTTGTCGGGACTTaGTGTAGAGTGCTACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPTKAQVFKESSMFHWLKSVVGT*CRVLLR Trigger: CCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGA...TTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCTAGTTGTAAGTGCTTATaGGAAAGGGCACTGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: AVISGQSENSQETQMTSASCKCL*ERALSA Trigger: AGCTGACAGTGCCCTTTCGCATAAGCACTTACAACT...AGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| 3UTR-3UTR GCA 90 bp | CCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCTAGGCAGGCTTCTGCCTaGAGAACCAAGCTTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: PPRLRCLKNLVCSTGSKSRQASA*RTKLLM Trigger: CATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCT...AGACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| 3UTR-3UTR GCA 90 bp | CATACAGCCTATAAGGCAAAGTCTAAGGTGTGTACAACACTGGCACTGTGCTGTTTTCAGGCAGGCTTCTaGCTGCAGAACCAAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: HTAYKAKSKVCTTLALCCFQAGF*LQNQAS Trigger: AGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCTGAAA...ACAGCACAGTGCCAGTGTTGTACACACCTTAGACTTTGCCTTATAGGCTGTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| 3UTR-3UTR GCA 90 bp | CTTTACTCATTAATGCCTGCCCCCATGTTTCTGTCTATCTGCCCGTCTGTCTCTAGTTGTAAGTGCTTATaGGAAAGGGCACTGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LYSLMPAPMFLSICPSVSSCKCL*ERALSA Trigger: AGCTGACAGTGCCCTTTCGCATAAGCACTTACAACT...AGAGACAGACGGGCAGATAGACAGAAACATGGGGGCAGGCATTAATGAGTAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR GCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCTGGAGTATCAGGGGATaGCATGGTGTAAATAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: GILLPLPLECYKENTTMPWSIRG*HGVNKD Trigger: ATCTTTATTTACACCATGGCATCCCCTGATACTCCA...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| 3UTR-3UTR CCA 90 bp | ATCACCTACTGTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCACTATGTAACCTAGTCTaGTTCAAATTCTTAGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: ITYCAWPKQKWQQLLLPPLCNLV*FKFLGI Trigger: GATCCCTAAGAATTTGAACCAGACTAGGTTACATAG...TGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR GCA 90 bp | CCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCAGTTGTAAGTGCTTATaGGAAAGGGCACTGTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PTKAQVFKESSMFHWLKVSCKCL*ERALSA Trigger: AGCTGACAGTGCCCTTTCGCATAAGCACTTACAACT...GACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTAGTTGTAAGTGCTTATaGGAAAGGGCACTGTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: KAVISGQSENSQETQMTSSCKCL*ERALSA Trigger: AGCTGACAGTGCCCTTTCGCATAAGCACTTACAACT...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCAATGAACACTGTCTATaGGAATGTCATGAATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: GILLPLPLECYKENTTMPNEHCL*ECHESV Trigger: AACTGATTCATGACATTCCCATAGACAGTGTTCATT...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTATGTCATCCATACAGTGCATGTGAGCATCACTATATTTCTGTGAAATGTAGGCAGGCTTCTGCCTaGAGAACCAAGCTTCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: LLCHPYSACEHHYISVKCRQASA*RTKLLM Trigger: CATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCT...ACATTTCACAGAAATATAGTGATGCTCACATGCACTGTATGGATGACATAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACTCATTAATGCCTGCCCCCATGTTTCTGTCTATCTGCCCGTCTGTCTCTAATGAACACTGTCTATaGGAATGTCATGAATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LYSLMPAPMFLSICPSVSNEHCL*ECHESV Trigger: AACTGATTCATGACATTCCCATAGACAGTGTTCATT...AGAGACAGACGGGCAGATAGACAGAAACATGGGGGCAGGCATTAATGAGTAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTAATGAACACTGTCTATaGGAATGTCATGAATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: KAVISGQSENSQETQMTSNEHCL*ECHESV Trigger: AACTGATTCATGACATTCCCATAGACAGTGTTCATT...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAAATGAACACTGTCTATaGGAATGTCATGAATCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LPTKAQVFKESSMFHWLKNEHCL*ECHESV Trigger: AACTGATTCATGACATTCCCATAGACAGTGTTCATT...TTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTACTTCTTTTTCTGAACACAAATCCTGTTATGTCATCCATACAGTGCATGTGATATTAGTTATGAGCTaGACCTGCTGCACCTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: FTSFSEHKSCYVIHTVHVILVMS*TCCTCP Trigger: AGGGCAGGTGCAGCAGGTGCAGCTCATAACTAATAT...CACATGCACTGTATGGATGACATAACAGGATTTGTGTTCAGAAAAAGAAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR GCA 90 bp | AAATTTCCCAGCCAATTAAATCTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGCAGAATGATTTCAAGTaGAGCTCCCACAAAGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KFPSQLNLPKSPSRSNLVQNDFK*SSHKAK Trigger: TTTGGCTTTGTGGGAGCTGCACTTGAAATCATTCTG...CACTAGATTCGATCTACTTGGAGACTTTGGAAGATTTAATTGGCTGGGAAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| 3UTR-3UTR TCA 90 bp | AAATTTCCCAGCCAATTAAATCTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGGATAGAAAATCAGAATaGTTTCAAGTGCAGCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KFPSQLNLPKSPSRSNLVDRKSE*FQVQLP Trigger: TGGGAGCTGCACTTGAAATCATTCTGATTTTCTATC...CACTAGATTCGATCTACTTGGAGACTTTGGAAGATTTAATTGGCTGGGAAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| 3UTR GCA 72 bp | GTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTaGCACCATGCCCACAGCCCCATAGGTGGTGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLGQSRSGNNCC*HHAHSPIGGEQ Trigger: CTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | CTGTATCAGCCAGCCTCTAGCACATGCCCAGTGAAGTaGTGGCACCTGGAACCAGTCCCTCCCTCCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LYQPASSTCPVK*WHLEPVPPSRQ Trigger: TTGCCTGGAGGGAGGGACTGGTTCCAGGTGCCATCACTTCACTGGGCATGTGCTAGAGGCTGGCTGATACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | CTGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTaGGCAGCAGACCCAACAAGGTTCCTTCTGATTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLLPPCPQPHRW*AADPTRFLLIH Trigger: GTGAATCAGAAGGAACCTTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAACAGAGCTCTGTTTGGTaGTTGGCAAATGGTGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQQSSVW*LANGVH Trigger: GTGCACACCATTTGCCAACAACCAAACAGAGCTCTG...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAACTTGCAGAGCTCTGTTaGGTTGTTGGCAAATGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQLAELC*VVGKWC Trigger: ACACCATTTGCCAACAACCAAACAGAGCTCTGCAAG...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | GCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTaGCCTGTAAGTTCTGGGTATCACACTGGTAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: AAPAAPALLWRP*PVSSGYHTGNL Trigger: AAGGTTACCAGTGTGATACCCAGAACTTACAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| 3UTR TCA 72 bp | AAGTTCTGTATCAGCCAGCCTCTAGCACATGCCCAGTaGAGTGATGGCACCTGGAACCAGTCCCTCCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KFCISQPLAHAQ*SDGTWNQSLPP Trigger: TGGAGGGAGGGACTGGTTCCAGGTGCCATCACTTCACTGGGCATGTGCTAGAGGCTGGCTGATACAGAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR CCA 72 bp | GCAGGAGCTCACACTCGGGAATCTATCAATACTCACTaGAGGTACACACTGACCCACTCAGAGCCACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGAHTRESINTH*RYTLTHSEPQH Trigger: GTGCTGTGGCTCTGAGTGGGTCAGTGTGTACCTCCAGTGAGTATTGATAGATTCCCGAGTGTGAGCTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | TTCCAGGACCTTGTGAAAATGCTTTGGGGCACCAGATaGCTTTCAGGCAGGCTTCTGCCTGCAGAACCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FQDLVKMLWGTR*LSGRLLPAEPS Trigger: GCTTGGTTCTGCAGGCAGAAGCCTGCCTGAAAGTCATCTGGTGCCCCAAAGCATTTTCACAAGGTCCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| 3UTR CCA 72 bp | TCTGTGCTGCTGACTATCAGGATCACCTACTGTGCTTaGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SVLLTIRITYCA*PKQKWQQLLLP Trigger: TGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGATCCTGATAGTCAGCAGCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | AGTCCTCTGAAAGCAAAGCTAGTGCTCTTTAACTGCTaGGCCATCTCTCCAGCCATTCCACCTCCAACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SPLKAKLVLFNC*AISPAIPPPTL Trigger: GAGGGTTGGAGGTGGAATGGCTGGAGAGATGGCTCAGCAGTTAAAGAGCACTAGCTTTGCTTTCAGAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR GCA 72 bp | CCTTGCAGAGCTCTGTTTGGTTGTTGGCAAATGGTGTaGACCGAAGTGACTGCAGCAGAAAACTCTGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PCRALFGCWQMV*TEVTAAENSDL Trigger: GAGGTCAGAGTTTTCTGCTGCAGTCACTTCGGTGCACACCATTTGCCAACAACCAAACAGAGCTCTGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR GCA 72 bp | GGAATCTGTGCTGCTGACTATCAGGATCACCTACTGTaGTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GICAADYQDHLL*LAKAEVATTAA Trigger: AGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGATCCTGATAGTCAGCAGCACAGATTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR GCA 72 bp | AGTTATGAGCTCATATTAGTTATGAGCTGCACCTGCTaGACCTGCCCTTCTGTGGAGACCCTGACCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SYELILVMSCTC*TCPSVETLTCK Trigger: CTTACAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAATATGAGCTCATAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| 3UTR GCA 72 bp | GTGACTGCAGCAGAAAACTCTGACCTCTCCCTGACTTaGTCTGCTTCAGAGCCTGTCATTAATGACCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VTAAENSDLSLT*SASEPVINDQV Trigger: TACCTGGTCATTAATGACAGGCTCTGAAGCAGAGCAAGTCAGGGAGAGGTCAGAGTTTTCTGCTGCAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR GCA 72 bp | GGAAGTGTTTTTCCTTCACCATGTGCCTGCAGTCAGTaGCCATGGAGGTCTGAAAGGGTATTTAATCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSVFPSPCACSQ*PWRSERVFNPL Trigger: CAGGGGATTAAATACCCTTTCAGACCTCCATGGGCACTGACTGCAGGCACATGGTGAAGGAAAAACACTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR CCA 72 bp | AGCTGGGTCCAGACCCACCAGAATGAACACTGTCTATaGGAATGTCATGAATCAGTTGTCGGGACTTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SWVQTHQNEHCL*ECHESVVGTCC Trigger: ACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGGACCCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| 3UTR CCA 72 bp | TCAGACACCTTACCTTGCAGAGCTCTGTTTGGTTGTTaGCAAATGGTGTGCACCGAAGTGACTGCAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SDTLPCRALFGC*QMVCTEVTAAE Trigger: TTCTGCTGCAGTCACTTCGGTGCACACCATTTGCCAACAACCAAACAGAGCTCTGCAAGGTAAGGTGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR GCA 72 bp | CAACTAAGTAGTTATGAGCTCATATTAGTTATGAGCTaGACCTGCTGCACCTGCCCTTCTGTGGAGACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLSSYELILVMS*TCCTCPSVETL Trigger: CAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAATATGAGCTCATAACTACTTAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| 3UTR GCA 72 bp | GTCTTCACGAACTTGGAATATGAAGCCTCAGCATGCTaGTGTCCTTTCGTGAAGTTCTGTATCAGCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VFTNLEYEASAC*CPFVKFCISQP Trigger: AGGCTGGCTGATACAGAACTTCACGAAAGGACAGCAGCATGCTGAGGCTTCATATTCCAAGTTCGTGAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | TATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATaGCTAGTGCTAAGTTGTAAGTGCTTATGCGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: YPANQKTPRRHR*LVLSCKCLCER Trigger: CCTTTCGCATAAGCACTTACAACTTAGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| 3UTR GCA 72 bp | GCAGAGCTTTCTGCACTCTGTAAAACAGCACTGCAATaGAGGACTCCTGCATATAACTGTCTTCACGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: AELSALCKTALQ*RTPAYNCLHEL Trigger: AAGTTCGTGAAGACAGTTATATGCAGGAGTCCTGCATTGCAGTGCTGTTTTACAGAGTGCAGAAAGCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | GGAGACTTAAGGTGGTGTATGAGAGGCACCGAAGCCTaGAAAAGCAATTTCTGTCTTTGGGTTACACACATA | + |
|
Preference number: 3 (lower is better) Translates to: GDLRWCMRGTEA*KSNFCLWVTHI Trigger: TATGTGTGTAACCCAAAGACAGAAATTGCTTTTTCAGGCTTCGGTGCCTCTCATACACCACCTTAAGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| 3UTR TCA 72 bp | ACTCCTGCATATAACTGTCTTCACGAACTTGGAATATaGAGCCTCAGCATGCTGCTGTCCTTTCGTGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TPAYNCLHELGI*SLSMLLSFREV Trigger: AACTTCACGAAAGGACAGCAGCATGCTGAGGCTTCATATTCCAAGTTCGTGAAGACAGTTATATGCAGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR GCA 72 bp | CTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATaGCCAGTTTCATGCCCGTTTAAAGAGGACATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LCHLSAIRKTLP*PVSCPFKEDIQ Trigger: TTGAATGTCCTCTTTAAACGGGCATGAAACTGGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR CCA 72 bp | CAGCCTATAAGGCAAAGTCTAAGGTGTGTACAACACTaGCACTGTGCTGTGAAAAGTATTATCAGGTACACA | + |
|
Preference number: 3 (lower is better) Translates to: QPIRQSLRCVQH*HCAVKSIIRYT Trigger: TGTGTACCTGATAATACTTTTCACAGCACAGTGCCAGTGTTGTACACACCTTAGACTTTGCCTTATAGGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| 3UTR CCA 72 bp | TCAGAGCCACAGCACCAAGTTTCCTTAAAACTAACCTaGAGTATCAGGGGATGCCATGGTGTAAATAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SEPQHQVSLKLT*SIRGCHGVNKD Trigger: ATCTTTATTTACACCATGGCATCCCCTGATACTCCAGGTTAGTTTTAAGGAAACTTGGTGCTGTGGCTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR GCA 72 bp | AGTGCTATAAGGAAAACACTACCATGCCCAGTTTCATaGCCGTTTAAAGAGGACATTCAAGGTAAGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SAIRKTLPCPVS*PFKEDIQGKRT Trigger: TGTTCTCTTACCTTGAATGTCCTCTTTAAACGGGCATGAAACTGGGCATGGTAGTGTTTTCCTTATAGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR CAA 90 bp | TTAGATCTTTACTCATTAATGCCTGCCCCCATGTTTCTGTCTATCTGCCCGTCTAAGCAATTTCTGTCTTaGGGTTACACACATACAACA | + |
|
Preference number: 3 (lower is better) Translates to: LDLYSLMPAPMFLSICPSKQFLS*GYTHTT Trigger: TGTTGTATGTGTGTAACCCAAAGACAGAAATTGCTT...AGACGGGCAGATAGACAGAAACATGGGGGCAGGCATTAATGAGTAAAGATCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR TCA 72 bp | AACACAAATCCTGTTATGTCATCCATACAGTGCATGTaGGCATCACTATATTTCTGTGAAATGTGTGCTACC | + |
|
Preference number: 3 (lower is better) Translates to: NTNPVMSSIQCM*ASLYFCEMCAT Trigger: GGTAGCACACATTTCACAGAAATATAGTGATGCTCACATGCACTGTATGGATGACATAACAGGATTTGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| 3UTR-3UTR CAA 90 bp | CAATTAAATCTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGATTCCCAGTGTTGTTGTGTCATCCTTCTaGGGTGTAAAGTTTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QLNLPKSPSRSNLVIPSVVVSSF*GVKFPK Trigger: TTTTGGAAACTTTACACCCAAGAAGGATGACACAAC...AACACTGGGAATCACTAGATTCGATCTACTTGGAGACTTTGGAAGATTTAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTATGTCATCCATACAGTGCATGTGAGCATCACTATATTTCTGTGAAATGTAATGTAGTTTGTTACTaGTACAACAGTTTCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLCHPYSACEHHYISVKCNVVCY*YNSFQD Trigger: GTCCTGGAAACTGTTGTACAAGTAACAAACTACATT...ACATTTCACAGAAATATAGTGATGCTCACATGCACTGTATGGATGACATAACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGTCTCGCACTTGGCTGTaGAAGTGCTGCTCCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISYELHLLHLPFCGDPDLSRTWL*KCCSRA Trigger: GGCGCGGGAGCAGCACTTCCACAGCCAAGTGCGAGA...CAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCTGGCTGTGGAAGTGCTaGTCCCGCGCCGACACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GFCLQNQASHGVKQKPKGWLWKC*SRADTS Trigger: CGAGGTGTCGGCGCGGGAGCAGCACTTCCACAGCCA...GCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | ATCACCTACTGTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCAACTTGGCTGTGGAAGTaGTGCTCCCGCGCCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: ITYCAWPKQKWQQLLLPPTWLWK*CSRADT Trigger: GGTGTCGGCGCGGGAGCAGCACTTCCACAGCCAAGT...TGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | TATGAAGCCTCAGCATGCTGCTGTCCTTTCGTGAAGTTCTGTATCAGCCAGCCTTGGCTGTGGAAGTGCTaGTCCCGCGCCGACACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YEASACCCPFVKFCISQPWLWKC*SRADTS Trigger: CGAGGTGTCGGCGCGGGAGCAGCACTTCCACAGCCA...AGGCTGGCTGATACAGAACTTCACGAAAGGACAGCAGCATGCTGAGGCTTCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CCA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAAGCCCCTTGTTCCCTTTaGCATTGCAGTCTCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQAPCSL*HCSLIN Trigger: GTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGC...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAAATTTCTCTCCCAAGCTaGAGCCTTTTTCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQISLPS*SLFPPL Trigger: GAGAGGAGGAAAAAGGCTTCAGCTTGGGAGAGAAAT...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR TCA 90 bp | ATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGCAGCATAACCGTGGATaGGGGAGCCATTCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: ISYELHLLHLPFCGDPDLQHNRG*GSHSAT Trigger: AGTGGCTGAATGGCTCCCTCATCCACGGTTATGCTG...CAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179191.6 |
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| CDS-3UTR GCA 90 bp | AAGAGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTTGGCATTGCAGTCTCGCAGGCAAAGAATATTaGACGCCACCAGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRGTSYAGAPCSLWHCSLAGKEY*TPPGGL Trigger: CAGTCCTCCTGGTGGCGTGCAATATTCTTTGCCTGC...GAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTTCTCGCACTTGGCTGTaGAAGTGCTGCTCCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QASHGVKQKPKGVRVFTSSRTWL*KCCSRA Trigger: GGCGCGGGAGCAGCACTTCCACAGCCAAGTGCGAGA...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | AAGAGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTTGGCATTGCAGTCTCGGCTTCACCAGCAACTaGCCCATGACTGTGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: KRGTSYAGAPCSLWHCSLGFTSN*PMTVNI Trigger: TATGTTCACAGTCATGGGTCAGTTGCTGGTGAAGCC...GAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| CDS-3UTR GCA 90 bp | CATACAGCCTATAAGGCAAAGTCTAAGGTGTGTACAACACTGGCACTGTGCTGTTGGCTGTGGAAGTGCTaGTCCCGCGCCGACACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HTAYKAKSKVCTTLALCCWLWKC*SRADTS Trigger: CGAGGTGTCGGCGCGGGAGCAGCACTTCCACAGCCA...ACAGCACAGTGCCAGTGTTGTACACACCTTAGACTTTGCCTTATAGGCTGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | TGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGTAAGTTCTGGGTAGCCCCTTGTTCCCTTTaGCATTGCAGTCTCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CTCCTCPSVETLTCKFWVAPCSL*HCSLIN Trigger: GTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGC...TACCCAGAACTTACAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| CDS-3UTR TCA 90 bp | CATATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGACACGGCTAGAGTaGAGGTGCTCAGAAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: HISYELHLLHLPFCGDPDLTRLE*RCSETT Trigger: CGTTGTTTCTGAGCACCTTCACTCTAGCCGTGTCAG...GTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTTCCACAAACCGTGGATaGGGGAGCCATTCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QAGFCLQNQASHGVKQKPSTNRG*GSHSAT Trigger: AGTGGCTGAATGGCTCCCTCATCCACGGTTTGTGGA...AGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055195.11 |
||
| CDS-3UTR TCA 90 bp | TGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGTAAGTTCTGGGTAGAAGTCCTAGGGCCTTaGAAAGTTCTTCTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: CTCCTCPSVETLTCKFWVEVLGP*KVLLVL Trigger: CAGTACGAGAAGAACTTTTCAAGGCCCTAGGACTTC...TACCCAGAACTTACAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| CDS-3UTR GCA 90 bp | ATCACCTACTGTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCAGCAGGCAAAGAATATTaGACGCCACCAGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ITYCAWPKQKWQQLLLPPAGKEY*TPPGGL Trigger: CAGTCCTCCTGGTGGCGTGCAATATTCTTTGCCTGC...TGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTTCTCGCACTTGGCTGTaGAAGTGCTGCTCCCGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSSRTWL*KCCSRA Trigger: GGCGCGGGAGCAGCACTTCCACAGCCAAGTGCGAGA...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | TGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGGTGGACTCTCGCACTTaGCTGTGGAAGTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WECHESVVGTCCRVLLRQVDSRT*LWKCCS Trigger: GGAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCAC...CTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
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| 3UTR CAA 72 bp | ATCTGTGCTGCTGACTATCAGGATCACCTACTGTGCTaGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ICAADYQDHLLC*AKAEVATTAAA Trigger: GGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGATCCTGATAGTCAGCAGCACAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | TTAGATCTTTACTCATTAATGCCTGCCCCCATGTTTCTGTCTATCTGCCCGTCTACTTGGCTGTGGAAGTaGTGCTCCCGCGCCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LDLYSLMPAPMFLSICPSTWLWK*CSRADT Trigger: GGTGTCGGCGCGGGAGCAGCACTTCCACAGCCAAGT...AGACGGGCAGATAGACAGAAACATGGGGGCAGGCATTAATGAGTAAAGATCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | ATTAGTTATGAGCTGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGTGTTCCCTTTGGCATTaGAGTCTCATCAACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISYELHLLHLPFCGDPDLCSLWH*SLINQQ Trigger: CTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACA...CAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCAGCTCATAACTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
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| CDS-3UTR CCA 90 bp | CTTTACTCATTAATGCCTGCCCCCATGTTTCTGTCTATCTGCCCGTCTGTCTCTGTGGACTCTCGCACTTaGCTGTGGAAGTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYSLMPAPMFLSICPSVSVDSRT*LWKCCS Trigger: GGAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCAC...AGAGACAGACGGGCAGATAGACAGAAACATGGGGGCAGGCATTAATGAGTAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CCA 90 bp | TGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGTAAGTTCTGGGTACCACAAAGCCAAAAGTaGAAAGAGAGGCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CTCCTCPSVETLTCKFWVPQSQK*KERHFL Trigger: TAGGAAGTGCCTCTCTTTCCACTTTTGGCTTTGTGG...TACCCAGAACTTACAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTCTGACACGGCTAGAGTaGAGGTGCTCAGAAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: QASHGVKQKPKGVRVFTSLTRLE*RCSETT Trigger: CGTTGTTTCTGAGCACCTTCACTCTAGCCGTGTCAG...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
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| CDS-3UTR TCA 90 bp | GGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGGCTTCACCAGCAACTaGCCCATGACTGTGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: GFCLQNQASHGVKQKPKGGFTSN*PMTVNI Trigger: TATGTTCACAGTCATGGGTCAGTTGCTGGTGAAGCC...GCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| CDS-3UTR GCA 90 bp | TCCTGGGGCTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGCAGGCAAAGAATATTaGACGCCACCAGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SWGCPPRLRCLKNLVCSTAGKEY*TPPGGL Trigger: CAGTCCTCCTGGTGGCGTGCAATATTCTTTGCCTGC...AGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAGCCCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| CDS-3UTR GCA 90 bp | GCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCTGCAGGCAAAGAATATTaGACGCCACCAGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: AVISGQSENSQETQMTSAAGKEY*TPPGGL Trigger: CAGTCCTCCTGGTGGCGTGCAATATTCTTTGCCTGC...AGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CCA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTACGGGACAGGCCAACTaGAGTACACAAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QASHGVKQKPKGVRVFTSTGQAN*STQEKQ Trigger: CTGCTTCTCTTGTGTACTCCAGTTGGCCTGTCCCGT...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| CDS-3UTR CCA 90 bp | GCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGACGGGACAGGCCAACTaGAGTACACAAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGFCLQNQASHGVKQKPKTGQAN*STQEKQ Trigger: CTGCTTCTCTTGTGTACTCCAGTTGGCCTGTCCCGT...CTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| CDS-3UTR CCA 90 bp | GCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCTACGGGACAGGCCAACTaGAGTACACAAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVISGQSENSQETQMTSATGQAN*STQEKQ Trigger: CTGCTTCTCTTGTGTACTCCAGTTGGCCTGTCCCGT...AGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTATTTCTCTCCCAAGCTaGAGCCTTTTTCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAGFCLQNQASHGVKQKPISLPS*SLFPPL Trigger: GAGAGGAGGAAAAAGGCTTCAGCTTGGGAGAGAAAT...AGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCCGCCACCAGGAGGACTaGAATGGATGTTTCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: GILLPLPLECYKENTTMPRHQED*NGCFNK Trigger: CTTATTGAAACATCCATTTCAGTCCTCCTGGTGGCG...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTGAAGTCCTAGGGCCTTaGAAAGTTCTTCTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGFCLQNQASHGVKQKPEVLGP*KVLLVL Trigger: CAGTACGAGAAGAACTTTTCAAGGCCCTAGGACTTC...AGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCCCAGAGTTTCCAAAATaGGGGCTCGGATTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GILLPLPLECYKENTTMPPEFPK*GLGFPF Trigger: AAAAGGGAATCCGAGCCCGCATTTTGGAAACTCTGG...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000055195.11 |
||
| CDS-3UTR GCA 90 bp | TGCTGCTGCCACCATGCCCACAGCCCCATAGGTGGTGAGCAGCAGACCCAACAAACATTCTCAAGTTCTTaGTCCAATTCCATTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: CCCHHAHSPIGGEQQTQQTFSSS*SNSITL Trigger: CAATGTAATGGAATTGGAGCAAGAACTTGAGAATGT...TTGTTGGGTCTGCTGCTCACCACCTATGGGGCTGTGGGCATGGTGGCAGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CCA 90 bp | TCCTGGGGCTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTAGATTCCACAAACCGTaGATGAGGGAGCCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SWGCPPRLRCLKNLVCSTRFHKP*MREPFS Trigger: GCTGAATGGCTCCCTCATCCACGGTTTGTGGAATCT...AGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAGCCCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055195.11 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTCTGACACGGCTAGAGTaGAGGTGCTCAGAAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSLTRLE*RCSETT Trigger: CGTTGTTTCTGAGCACCTTCACTCTAGCCGTGTCAG...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | CAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGGGCTTCACCAGCAACTaGCCCATGACTGTGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: QTHQNEHCLWECHESVVGGFTSN*PMTVNI Trigger: TATGTTCACAGTCATGGGTCAGTTGCTGGTGAAGCC...CCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | GCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGATTTCTCTCCCAAGCTaGAGCCTTTTTCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGFCLQNQASHGVKQKPKISLPS*SLFPPL Trigger: GAGAGGAGGAAAAAGGCTTCAGCTTGGGAGAGAAAT...CTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTCGCCACCAGGAGGACTaGAATGGATGTTTCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: QASHGVKQKPKGVRVFTSRHQED*NGCFNK Trigger: CTTATTGAAACATCCATTTCAGTCCTCCTGGTGGCG...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | GCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCTCGCCACCAGGAGGACTaGAATGGATGTTTCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVISGQSENSQETQMTSARHQED*NGCFNK Trigger: CTTATTGAAACATCCATTTCAGTCCTCCTGGTGGCG...AGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAACAAAACCTTCGTGGATaGGGGAGCCATTCAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LPTKAQVFKESSMFHWLKQNLRG*GSHSAT Trigger: AGTGGCTGAATGGCTCCCTCATCCACGAAGGTTTTG...TTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCGCAGGCAAAGAATATTaGACGCCACCAGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PTKAQVFKESSMFHWLKVAGKEY*TPPGGL Trigger: CAGTCCTCCTGGTGGCGTGCAATATTCTTTGCCTGC...GACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | TGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGTGTTCCCTTTGGCATTaGAGTCTCATCAACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WECHESVVGTCCRVLLRQCSLWH*SLINQQ Trigger: CTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACA...CTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CCA 90 bp | CAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGGCCCCTTGTTCCCTTTaGCATTGCAGTCTCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QTHQNEHCLWECHESVVGAPCSL*HCSLIN Trigger: GTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGC...CCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGGCTTCACCAGCAACTaGCCCATGACTGTGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: LPTKAQVFKESSMFHWLKGFTSN*PMTVNI Trigger: TATGTTCACAGTCATGGGTCAGTTGCTGGTGAAGCC...TTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | GTCCAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGCTTCACCAGCAACTaGCCCATGACTGTGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: VQTHQNEHCLWECHESVVGFTSN*PMTVNI Trigger: TATGTTCACAGTCATGGGTCAGTTGCTGGTGAAGCC...GACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGGCTTCACCAGCAACTaGCCCATGACTGTGAACATA | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSGFTSN*PMTVNI Trigger: TATGTTCACAGTCATGGGTCAGTTGCTGGTGAAGCC...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | GTCCGAGTCTTCACCTCTCATCCAGGTAGTTCCTGCTATAGACACACAGCTTTTGAAGTCCTAGGGCCTTaGAAAGTTCTTCTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VRVFTSHPGSSCYRHTAFEVLGP*KVLLVL Trigger: CAGTACGAGAAGAACTTTTCAAGGCCCTAGGACTTC...AAAAGCTGTGTGTCTATAGCAGGAACTACCTGGATGAGAGGTGAAGACTCGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | CAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGCCAGAGTTTCCAAAATaGGGGCTCGGATTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTHQNEHCLWECHESVVGPEFPK*GLGFPF Trigger: AAAAGGGAATCCGAGCCCGCATTTTGGAAACTCTGG...CCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR GCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGGCAGGCAAAGAATATTaGACGCCACCAGGAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVEAGKEY*TPPGGL Trigger: CAGTCCTCCTGGTGGCGTGCAATATTCTTTGCCTGC...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR GCA 90 bp | GTCCGAGTCTTCACCTCTCATCCAGGTAGTTCCTGCTATAGACACACAGCTTTTTGTTCCCTTTGGCATTaGAGTCTCATCAACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRVFTSHPGSSCYRHTAFCSLWH*SLINQQ Trigger: CTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACA...AAAAGCTGTGTGTCTATAGCAGGAACTACCTGGATGAGAGGTGAAGACTCGGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGACGGGACAGGCCAACTaGAGTACACAAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVETGQAN*STQEKQ Trigger: CTGCTTCTCTTGTGTACTCCAGTTGGCCTGTCCCGT...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGATTCCCAGTGTTCTGGACATCACGGGACAGGCCAACTaGAGTACACAAGAGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPKSPSRSNLVIPSVLDITGQAN*STQEKQ Trigger: CTGCTTCTCTTGTGTACTCCAGTTGGCCTGTCCCGT...GATGTCCAGAACACTGGGAATCACTAGATTCGATCTACTTGGAGACTTTGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCCCATGTAGTCTTCTCTaGAGTGCTTCTTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFCLQNQASHGVKQKPKGPCSLL*SASSSR Trigger: TCTAGAAGAAGAAGCACTCCAGAGAAGACTACATGG...GCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCCCCTTGTTCCCTTTaGCATTGCAGTCTCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSAPCSL*HCSLIN Trigger: GTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGC...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGCCCCTTGTTCCCTTTaGCATTGCAGTCTCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPTKAQVFKESSMFHWLKAPCSL*HCSLIN Trigger: GTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGC...TTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | TGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGTCAGGTCCACAAAGCCAAAAGTaGAAAGAGAGGCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CHESVVGTCCRVLLRQSGPQSQK*KERHFL Trigger: TAGGAAGTGCCTCTCTTTCCACTTTTGGCTTTGTGG...ACCTGACTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CCA 90 bp | GTCCAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGAAGTCCCAGTGTTCTaGACATCACAGGCAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VQTHQNEHCLWECHESVVEVPVF*TSQAKQ Trigger: CTGCTTTGCCTGTGATGTCCAGAACACTGGGACTTC...GACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTATTTCTCTCCCAAGCTaGAGCCTTTTTCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSISLPS*SLFPPL Trigger: GAGAGGAGGAAAAAGGCTTCAGCTTGGGAGAGAAAT...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | CTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAACGCCACCAGGAGGACTaGAATGGATGTTTCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTKAQVFKESSMFHWLKRHQED*NGCFNK Trigger: CTTATTGAAACATCCATTTCAGTCCTCCTGGTGGCG...TTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTGATAGAAAATCAGAATaGTTTCAAGTGCAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAGFCLQNQASHGVKQKPDRKSE*FQVQLP Trigger: TGGGAGCTGCACTTGAAATCATTCTGATTTTCTATC...AGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | ATCACCTACTGTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCATTCTTCTCGTACTGCTaGTGTGAATTTTCTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITYCAWPKQKWQQLLLPPFFSYC*CEFSDQ Trigger: TTGATCAGAAAATTCACATCAGCAGTACGAGAAGAA...TGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTTGTTCCCTTTGGCATTaGAGTCTCATCAACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSCSLWH*SLINQQ Trigger: CTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACA...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR GCA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTCAGAATGATTTCAAGTaGAGCTCCCACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QASHGVKQKPKGVRVFTSQNDFK*SSHKAK Trigger: TTTGGCTTTGTGGGAGCTGCACTTGAAATCATTCTG...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | GCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCTCAGAATGATTTCAAGTaGAGCTCCCACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AVISGQSENSQETQMTSAQNDFK*SSHKAK Trigger: TTTGGCTTTGTGGGAGCTGCACTTGAAATCATTCTG...AGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CCA 90 bp | TGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGTCAGGTCCATGTAGTCTTCTCTaGAGTGCTTCTTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHESVVGTCCRVLLRQSGPCSLL*SASSSR Trigger: TCTAGAAGAAGAAGCACTCCAGAGAAGACTACATGG...ACCTGACTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGCGCCACCAGGAGGACTaGAATGGATGTTTCAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVERHQED*NGCFNK Trigger: CTTATTGAAACATCCATTTCAGTCCTCCTGGTGGCG...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | TGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGGATAGAAAATCAGAATaGTTTCAAGTGCAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WECHESVVGTCCRVLLRQDRKSE*FQVQLP Trigger: TGGGAGCTGCACTTGAAATCATTCTGATTTTCTATC...CTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | GCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTGCTGATAGAAAATCAGAATaGTTTCAAGTGCAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVISGQSENSQETQMTSADRKSE*FQVQLP Trigger: TGGGAGCTGCACTTGAAATCATTCTGATTTTCTATC...AGCACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCAACACAATGTTGTCATaGTGGCGAAGAGTAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFCLQNQASHGVKQKPKGNTMLS*WRRVNC Trigger: ACAATTTACTCTTCGCCATCATGACAACATTGTGTT...GCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | GGGCTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCTTCTTCTCGTACTGCTaGTGTGAATTTTCTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLPTKAQVFKESSMFHWLFFSYC*CEFSDQ Trigger: TTGATCAGAAAATTCACATCAGCAGTACGAGAAGAA...GAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCTTCTTCTCGTACTGCTaGTGTGAATTTTCTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: GFCLQNQASHGVKQKPKGFFSYC*CEFSDQ Trigger: TTGATCAGAAAATTCACATCAGCAGTACGAGAAGAA...GCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | CCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCTCCAGAGTTTCCAAAATaGGGGCTCGGATTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPRLRCLKNLVCSTGSKSPEFPK*GLGFPF Trigger: AAAAGGGAATCCGAGCCCGCATTTTGGAAACTCTGG...AGACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGCCAGAGTTTCCAAAATaGGGGCTCGGATTCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVEPEFPK*GLGFPF Trigger: AAAAGGGAATCCGAGCCCGCATTTTGGAAACTCTGG...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGGCTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTATCCCATCAGCGAAATaGAAGAATACAAATAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SWGCPPRLRCLKNLVCSTIPSAK*KNTNRA Trigger: TGCCCTATTTGTATTCTTGCATTTCGCTGATGGGAT...AGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAGCCCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTCCCTTTTTCAGGCCTaGAAAACCTTCGTGGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVESLFQA*KTFVDE Trigger: CTCATCCACGAAGGTTTTGCAGGCCTGAAAAAGGGA...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | GTCCGAGTCTTCACCTCTCATCCAGGTAGTTCCTGCTATAGACACACAGCTTTTCCATGTAGTCTTCTCTaGAGTGCTTCTTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRVFTSHPGSSCYRHTAFPCSLL*SASSSR Trigger: TCTAGAAGAAGAAGCACTCCAGAGAAGACTACATGG...AAAAGCTGTGTGTCTATAGCAGGAACTACCTGGATGAGAGGTGAAGACTCGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTCCACAAAGCCAAAAGTaGAAAGAGAGGCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSPQSQK*KERHFL Trigger: TAGGAAGTGCCTCTCTTTCCACTTTTGGCTTTGTGG...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| 3UTR CAA 72 bp | AATGCAGGACTCCTGCATATAACTGTCTTCACGAACTaGGAATATGAAGCCTCAGCATGCTGCTGTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NAGLLHITVFTN*EYEASACCCPF Trigger: GAAAGGACAGCAGCATGCTGAGGCTTCATATTCCAAGTTCGTGAAGACAGTTATATGCAGGAGTCCTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTACAACGATATCCTGTTaGCTACAGCATCCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSTTISC*LQHPHL Trigger: AAGATGAGGATGCTGTAGTCAACAGGATATCGTTGT...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | GTCCGAGTCTTCACCTCTCATCCAGGTAGTTCCTGCTATAGACACACAGCTTTTGATAGAAAATCAGAATaGTTTCAAGTGCAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRVFTSHPGSSCYRHTAFDRKSE*FQVQLP Trigger: TGGGAGCTGCACTTGAAATCATTCTGATTTTCTATC...AAAAGCTGTGTGTCTATAGCAGGAACTACCTGGATGAGAGGTGAAGACTCGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | TGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGAACACAATGTTGTCATaGTGGCGAAGAGTAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WECHESVVGTCCRVLLRQNTMLS*WRRVNC Trigger: ACAATTTACTCTTCGCCATCATGACAACATTGTGTT...CTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGCCACAAAGCCAAAAGTaGAAAGAGAGGCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVEPQSQK*KERHFL Trigger: TAGGAAGTGCCTCTCTTTCCACTTTTGGCTTTGTGG...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | CAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGAACACAATGTTGTCATaGTGGCGAAGAGTAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTHQNEHCLWECHESVVGNTMLS*WRRVNC Trigger: ACAATTTACTCTTCGCCATCATGACAACATTGTGTT...CCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | GTCCAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCATCCCATCAGCGAAATaGAAGAATACAAATAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VQTHQNEHCLWECHESVVIPSAK*KNTNRA Trigger: TGCCCTATTTGTATTCTTGCATTTCGCTGATGGGAT...GACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCATCCCATCAGCGAAATaGAAGAATACAAATAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTKAQVFKESSMFHWLKVIPSAK*KNTNRA Trigger: TGCCCTATTTGTATTCTTGCATTTCGCTGATGGGAT...GACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR GCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGCAGAATGATTTCAAGTaGAGCTCCCACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVEQNDFK*SSHKAK Trigger: TTTGGCTTTGTGGGAGCTGCACTTGAAATCATTCTG...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGGATAGAAAATCAGAATaGTTTCAAGTGCAGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVEDRKSE*FQVQLP Trigger: TGGGAGCTGCACTTGAAATCATTCTGATTTTCTATC...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR TCA 90 bp | CCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCAACACAATGTTGTCATaGTGGCGAAGAGTAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTKAQVFKESSMFHWLKVNTMLS*WRRVNC Trigger: ACAATTTACTCTTCGCCATCATGACAACATTGTGTT...GACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | CATACAGCCTATAAGGCAAAGTCTAAGGTGTGTACAACACTGGCACTGTGCTGTTTCTTCTCGTACTGCTaGTGTGAATTTTCTGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTAYKAKSKVCTTLALCCFFSYC*CEFSDQ Trigger: TTGATCAGAAAATTCACATCAGCAGTACGAGAAGAA...ACAGCACAGTGCCAGTGTTGTACACACCTTAGACTTTGCCTTATAGGCTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGATTCCCAGTGTTCTGGACATCCCAGGAGGACTGAAATaGACTAATTTTGTCTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPKSPSRSNLVIPSVLDIPGGLK*TNFVLR Trigger: CCTTAAGACAAAATTAGTCCATTTCAGTCCTCCTGG...GATGTCCAGAACACTGGGAATCACTAGATTCGATCTACTTGGAGACTTTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTATGTCATCCATACAGTGCATGTGAGCATCACTATATTTCTGTGAAATGTATTTCTCTCCCAAGCTaGAGCCTTTTTCCTCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCHPYSACEHHYISVKCISLPS*SLFPPL Trigger: GAGAGGAGGAAAAAGGCTTCAGCTTGGGAGAGAAAT...ACATTTCACAGAAATATAGTGATGCTCACATGCACTGTATGGATGACATAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGTCATATCCGGCCAATCAGAAAACTCCCAGGAGACACAGATGACTAGTACATTCTCAAGTTCTTaGTCCAATTCCATTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: KAVISGQSENSQETQMTSTFSSS*SNSITL Trigger: CAATGTAATGGAATTGGAGCAAGAACTTGAGAATGT...ACTAGTCATCTGTGTCTCCTGGGAGTTTTCTGATTGGCCGGATATGACAGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCACATTCTCAAGTTCTTaGTCCAATTCCATTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PTKAQVFKESSMFHWLKVTFSSS*SNSITL Trigger: CAATGTAATGGAATTGGAGCAAGAACTTGAGAATGT...GACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR TCA 90 bp | TTTACTTCTTTTTCTGAACACAAATCCTGTTATGTCATCCATACAGTGCATGTGGAAGTCCTAGGGCCTTaGAAAGTTCTTCTCGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FTSFSEHKSCYVIHTVHVEVLGP*KVLLVL Trigger: CAGTACGAGAAGAACTTTTCAAGGCCCTAGGACTTC...CACATGCACTGTATGGATGACATAACAGGATTTGTGTTCAGAAAAAGAAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGACATTCTCAAGTTCTTaGTCCAATTCCATTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: MNTVYGNVMNQLSGLAVETFSSS*SNSITL Trigger: CAATGTAATGGAATTGGAGCAAGAACTTGAGAATGT...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR GCA 90 bp | TTTACTTCTTTTTCTGAACACAAATCCTGTTATGTCATCCATACAGTGCATGTGTGTTCCCTTTGGCATTaGAGTCTCATCAACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTSFSEHKSCYVIHTVHVCSLWH*SLINQQ Trigger: CTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACA...CACATGCACTGTATGGATGACATAACAGGATTTGTGTTCAGAAAAAGAAGTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CCA 90 bp | CTGTTATGTCATCCATACAGTGCATGTGAGCATCACTATATTTCTGTGAAATGTCCACAAAGCCAAAAGTaGAAAGAGAGGCACTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LLCHPYSACEHHYISVKCPQSQK*KERHFL Trigger: TAGGAAGTGCCTCTCTTTCCACTTTTGGCTTTGTGG...ACATTTCACAGAAATATAGTGATGCTCACATGCACTGTATGGATGACATAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | CTGTTATGTCATCCATACAGTGCATGTGAGCATCACTATATTTCTGTGAAATGTCAGAATGATTTCAAGTaGAGCTCCCACAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLCHPYSACEHHYISVKCQNDFK*SSHKAK Trigger: TTTGGCTTTGTGGGAGCTGCACTTGAAATCATTCTG...ACATTTCACAGAAATATAGTGATGCTCACATGCACTGTATGGATGACATAACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CCA 90 bp | AAATTTCCCAGCCAATTAAATCTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGCCATGTAGTCTTCTCTaGAGTGCTTCTTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFPSQLNLPKSPSRSNLVPCSLL*SASSSR Trigger: TCTAGAAGAAGAAGCACTCCAGAGAAGACTACATGG...CACTAGATTCGATCTACTTGGAGACTTTGGAAGATTTAATTGGCTGGGAAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| CDS-3UTR GCA 90 bp | AAATTTCCCAGCCAATTAAATCTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGATCCCATCAGCGAAATaGAAGAATACAAATAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KFPSQLNLPKSPSRSNLVIPSAK*KNTNRA Trigger: TGCCCTATTTGTATTCTTGCATTTCGCTGATGGGAT...CACTAGATTCGATCTACTTGGAGACTTTGGAAGATTTAATTGGCTGGGAAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| CDS-3UTR CCA 90 bp | TTTACTTCTTTTTCTGAACACAAATCCTGTTATGTCATCCATACAGTGCATGTGCCATGTAGTCTTCTCTaGAGTGCTTCTTCTTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTSFSEHKSCYVIHTVHVPCSLL*SASSSR Trigger: TCTAGAAGAAGAAGCACTCCAGAGAAGACTACATGG...CACATGCACTGTATGGATGACATAACAGGATTTGTGTTCAGAAAAAGAAGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR GCA 90 bp | AAATTTCCCAGCCAATTAAATCTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGACATTCTCAAGTTCTTaGTCCAATTCCATTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: KFPSQLNLPKSPSRSNLVTFSSS*SNSITL Trigger: CAATGTAATGGAATTGGAGCAAGAACTTGAGAATGT...CACTAGATTCGATCTACTTGGAGACTTTGGAAGATTTAATTGGCTGGGAAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTCGTGGACTCTCGCACTaGGCTGTGGAAGTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QAGFCLQNQASHGVKQKPRGLSH*AVEVLL Trigger: GAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCACG...AGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS GCA 90 bp | AAGAGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTTGGCATTaGAGTCTCATCAACCAGCAGGCAAAGAATATTGCACGCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: KRGTSYAGAPCSLWH*SLINQQAKNIARHQ Trigger: CTGGTGGCGTGCAATATTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CAA 90 bp | GCAGGCTTCTGCCTGCAGAACCAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGCGTGGACTCTCGCACTaGGCTGTGGAAGTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGFCLQNQASHGVKQKPKRGLSH*AVEVLL Trigger: GAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCACG...CTTAGGCTTTTGCTTTACACCATGAGAAGCTTGGTTCTGCAGGCAGAAGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR CAA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTCGTGGACTCTCGCACTaGGCTGTGGAAGTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QASHGVKQKPKGVRVFTSRGLSH*AVEVLL Trigger: GAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCACG...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS CCA 90 bp | AGTGGAAAGAGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTTaGCATTGCAGTCTCATCAACCAGCAGGCAAAGAATATTGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: SGKRGTSYAGAPCSL*HCSLINQQAKNIAR Trigger: GCGTGCAATATTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCTCTTTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS CCA 90 bp | CACCAGCAACTGACCCATGACTGTGAACATACGGGACAGGCCAACTaGAGTACACAAGAGAAGCAGCAAGCATCCCATCAGCGAAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: HQQLTHDCEHTGQAN*STQEKQQASHQRNA Trigger: TGCATTTCGCTGATGGGATGCTTGCTGCTTCTCTTGTGTACTCCAGTTGGCCTGTCCCGTATGTTCACAGTCATGGGTCAGTTGCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200149.2 ENSMUST00000200564.5 |
||
| CDS-3UTR CAA 90 bp | ATCACCTACTGTGCTTGGCCAAAGCAGAAGTGGCAACAACTGCTGCTGCCACCAGCAAGCAGGATCTCATaGCTGATGATTGAGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ITYCAWPKQKWQQLLLPPASRIS*LMIEKG Trigger: ACCCTTCTCAATCATCAGCAATGAGATCCTGCTTGC...TGGTGGCAGCAGCAGTTGTTGCCACTTCTGCTTTGGCCAAGCACAGTAGGTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CAA 90 bp | TGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGTCAGGTGGCCCCTTGTTCCCTTaGGCATTGCAGTCTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CHESVVGTCCRVLLRQSGGPLFP*ALQSHQ Trigger: TTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCC...ACCTGACTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTGCTACTGAGGCAGGGCCCCTTGTTCCCTTaGGCATTGCAGTCTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: WECHESVVGTCCRVLLRQGPLFP*ALQSHQ Trigger: TTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCC...CTGCCTCAGTAGCACTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CAA 90 bp | TGCACCTGCTGCACCTGCCCTTCTGTGGAGACCCTGACCTGTAAGTTCTGGGTATCCAATTCCATTACATaGTACTCCACCGATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CTCCTCPSVETLTCKFWVSNSIT*YSTDED Trigger: ATCTTCATCGGTGGAGTACAATGTAATGGAATTGGA...TACCCAGAACTTACAGGTCAGGGTCTCCACAGAAGGGCAGGTGCAGCAGGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 |
||
| CDS-3UTR CAA 90 bp | CTTTACTCATTAATGCCTGCCCCCATGTTTCTGTCTATCTGCCCGTCTGTCTCTGGCCCCTTGTTCCCTTaGGCATTGCAGTCTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: LYSLMPAPMFLSICPSVSGPLFP*ALQSHQ Trigger: TTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCC...AGAGACAGACGGGCAGATAGACAGAAACATGGGGGCAGGCATTAATGAGTAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
||
| CDS-3UTR CAA 90 bp | CAAGCTTCTCATGGTGTAAAGCAAAAGCCTAAGGGCGTCCGAGTCTTCACCTCTTTGTTCCCTTTGGCATaGCAGTCTCATCAACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QASHGVKQKPKGVRVFTSLFPLA*QSHQPA Trigger: TGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAA...AGAGGTGAAGACTCGGACGCCCTTAGGCTTTTGCTTTACACCATGAGAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CAA 90 bp | CCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCGGCCCCTTGTTCCCTTaGGCATTGCAGTCTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: PTKAQVFKESSMFHWLKVGPLFP*ALQSHQ Trigger: TTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCC...GACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CAA 90 bp | GTCCGAGTCTTCACCTCTCATCCAGGTAGTTCCTGCTATAGACACACAGCTTTTTTGTTCCCTTTGGCATaGCAGTCTCATCAACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRVFTSHPGSSCYRHTAFLFPLA*QSHQPA Trigger: TGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAA...AAAAGCTGTGTGTCTATAGCAGGAACTACCTGGATGAGAGGTGAAGACTCGGAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CAA 90 bp | CAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGTTGTTCCCTTTGGCATaGCAGTCTCATCAACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTHQNEHCLWECHESVVGLFPLA*QSHQPA Trigger: TGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAA...CCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CAA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGGGCCCCTTGTTCCCTTaGGCATTGCAGTCTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: MNTVYGNVMNQLSGLAVEGPLFP*ALQSHQ Trigger: TTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCC...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
||
| CDS-3UTR CAA 90 bp | GTCCAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGCAAGCAGGATCTCATaGCTGATGATTGAGAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VQTHQNEHCLWECHESVVASRIS*LMIEKG Trigger: ACCCTTCTCAATCATCAGCAATGAGATCCTGCTTGC...GACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
||
| CDS-3UTR CAA 90 bp | GGGCTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCTCCAATTCCATTACATaGTACTCCACCGATGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLPTKAQVFKESSMFHWLSNSIT*YSTDED Trigger: ATCTTCATCGGTGGAGTACAATGTAATGGAATTGGA...GAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
||
| CDS-3UTR CAA 90 bp | GGGATCCTTCTGCCTCTGCCACTTGAGTGCTATAAGGAAAACACTACCATGCCCGTTGTGTCATCCTTCTaGGGTGTAAAGTTTCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GILLPLPLECYKENTTMPVVSSF*GVKFPK Trigger: TTTTGGAAACTTTACACCCAAGAAGGATGACACAAC...GGGCATGGTAGTGTTTTCCTTATAGCACTCAAGTGGCAGAGGCAGAAGGATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| CDS-3UTR CAA 90 bp | GGGCTGCCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCGTTGTGTCATCCTTCTaGGGTGTAAAGTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: GLPTKAQVFKESSMFHWLVVSSF*GVKFPK Trigger: TTTTGGAAACTTTACACCCAAGAAGGATGACACAAC...GAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGGCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| CDS-3UTR CAA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGTTGTTCCCTTTGGCATaGCAGTCTCATCAACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: MNTVYGNVMNQLSGLAVELFPLA*QSHQPA Trigger: TGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAA...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS-3UTR CAA 90 bp | CAGACCCACCAGAATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGTCCAATTCCATTACATaGTACTCCACCGATGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: QTHQNEHCLWECHESVVGSNSIT*YSTDED Trigger: ATCTTCATCGGTGGAGTACAATGTAATGGAATTGGA...CCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCATTCTGGTGGGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS-3UTR CAA 90 bp | CCCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCGTTGTGTCATCCTTCTaGGGTGTAAAGTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: PTKAQVFKESSMFHWLKVVVSSF*GVKFPK Trigger: TTTTGGAAACTTTACACCCAAGAAGGATGACACAAC...GACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| CDS GCA 90 bp | CAACTGGAGTACACAAGAGAAGCAGCAAGCATCCCATCAGCGAAATaGAAGAATACAAATAGGGCAAGTAGAATTCCCAGAGATCATATA | + |
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Preference number: 5 (lower is better) Translates to: QLEYTREAASIPSAK*KNTNRASRIPRDHI Trigger: TATATGATCTCTGGGAATTCTACTTGCCCTATTTGTATTCTTGCATTTCGCTGATGGGATGCTTGCTGCTTCTCTTGTGTACTCCAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS-3UTR CAA 90 bp | CCACCAAGGCTCAGGTGTTTAAAGAATCTAGTATGTTCCACTGGCTCAAAGTCTTCCAATTCCATTACATaGTACTCCACCGATGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PPRLRCLKNLVCSTGSKSSNSIT*YSTDED Trigger: ATCTTCATCGGTGGAGTACAATGTAATGGAATTGGA...AGACTTTGAGCCAGTGGAACATACTAGATTCTTTAAACACCTGAGCCTTGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 |
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| CDS-3UTR CAA 90 bp | TTAGATCTTTACTCATTAATGCCTGCCCCCATGTTTCTGTCTATCTGCCCGTCTGTTGTGTCATCCTTCTaGGGTGTAAAGTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LDLYSLMPAPMFLSICPSVVSSF*GVKFPK Trigger: TTTTGGAAACTTTACACCCAAGAAGGATGACACAAC...AGACGGGCAGATAGACAGAAACATGGGGGCAGGCATTAATGAGTAAAGATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 |
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| CDS-3UTR CAA 90 bp | ATGAACACTGTCTATGGGAATGTCATGAATCAGTTGTCGGGACTTGCTGTAGAGGTTGTGTCATCCTTCTaGGGTGTAAAGTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: MNTVYGNVMNQLSGLAVEVVSSF*GVKFPK Trigger: TTTTGGAAACTTTACACCCAAGAAGGATGACACAAC...CTCTACAGCAAGTCCCGACAACTGATTCATGACATTCCCATAGACAGTGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS-3UTR CAA 90 bp | CAATTAAATCTTCCAAAGTCTCCAAGTAGATCGAATCTAGTGATTCCCAGTGTTTCCAATTCCATTACATaGTACTCCACCGATGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: QLNLPKSPSRSNLVIPSVSNSIT*YSTDED Trigger: ATCTTCATCGGTGGAGTACAATGTAATGGAATTGGA...AACACTGGGAATCACTAGATTCGATCTACTTGGAGACTTTGGAAGATTTAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200149.2 |
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| CDS GCA 72 bp | AAACATATCGTGGACTCTCGCACTTGGCTGTGGAAGTaGTGCTCCCGCGCCGACACCTCGTCCTGCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KHIVDSRTWLWK*CSRADTSSCPS Trigger: GGAAGGGCAGGACGAGGTGTCGGCGCGGGAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCACGATATGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
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| CDS CCA 72 bp | AGAAGAAAACATATCGTGGACTCTCGCACTTGGCTGTaGAAGTGCTGCTCCCGCGCCGACACCTCGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: RRKHIVDSRTWL*KCCSRADTSSC Trigger: GCAGGACGAGGTGTCGGCGCGGGAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCACGATATGTTTTCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
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| CDS CCA 72 bp | GCAAAGAGAAGAAAACATATCGTGGACTCTCGCACTTaGCTGTGGAAGTGCTGCTCCCGCGCCGACACCTCG | + |
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Preference number: 6 (lower is better) Translates to: AKRRKHIVDSRT*LWKCCSRADTS Trigger: CGAGGTGTCGGCGCGGGAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCACGATATGTTTTCTTCTCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
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| CDS CAA 72 bp | GGCAAAGAGAAGAAAACATATCGTGGACTCTCGCACTaGGCTGTGGAAGTGCTGCTCCCGCGCCGACACCTC | + |
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Preference number: 6 (lower is better) Translates to: GKEKKTYRGLSH*AVEVLLPRRHL Trigger: GAGGTGTCGGCGCGGGAGCAGCACTTCCACAGCCAAGTGCGAGAGTCCACGATATGTTTTCTTCTCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000198105.5 |
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| CDS CAA 72 bp | GAGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTaGGCATTGCAGTCTCATCAACCAGCAGGCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: ERHFLCRGPLFP*ALQSHQPAGKE Trigger: TTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS CCA 72 bp | AGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTTaGCATTGCAGTCTCATCAACCAGCAGGCAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RGTSYAGAPCSL*HCSLINQQAKN Trigger: ATTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS CAA 90 bp | AAAGAGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTTGGCATaGCAGTCTCATCAACCAGCAGGCAAAGAATATTGCACGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: KERHFLCRGPLFPLA*QSHQPAGKEYCTPP Trigger: TGGTGGCGTGCAATATTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS TCA 72 bp | TCCAGGTCTTCAAGAATCGCTGGCTTCACCAGCAACTaGCCCATGACTGTGAACATACGGGACAGGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: SRSSRIAGFTSN*PMTVNIRDRPT Trigger: AGTTGGCCTGTCCCGTATGTTCACAGTCATGGGTCAGTTGCTGGTGAAGCCAGCGATTCTTGAAGACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200149.2 ENSMUST00000200564.5 |
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| CDS CCA 72 bp | CTGACCCATGACTGTGAACATACGGGACAGGCCAACTaGAGTACACAAGAGAAGCAGCAAGCATCCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: LTHDCEHTGQAN*STQEKQQASHQ Trigger: CTGATGGGATGCTTGCTGCTTCTCTTGTGTACTCCAGTTGGCCTGTCCCGTATGTTCACAGTCATGGGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200149.2 ENSMUST00000200564.5 |
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| CDS CAA 72 bp | CACTTCCTATGCCGGGGCCCCTTGTTCCCTTTGGCATaGCAGTCTCATCAACCAGCAGGCAAAGAATATTGC | + |
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Preference number: 6 (lower is better) Translates to: HFLCRGPLFPLA*QSHQPAGKEYC Trigger: GCAATATTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS CAA 90 bp | AAGTGGAAAGAGAGGCACTTCCTATGCCGGGGCCCCTTGTTCCCTTaGGCATTGCAGTCTCATCAACCAGCAGGCAAAGAATATTGCACG | + |
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Preference number: 6 (lower is better) Translates to: KWKERHFLCRGPLFP*ALQSHQPAGKEYCT Trigger: CGTGCAATATTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGTGCCTCTCTTTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS GCA 72 bp | ACTTCCTATGCCGGGGCCCCTTGTTCCCTTTGGCATTaGAGTCTCATCAACCAGCAGGCAAAGAATATTGCA | + |
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Preference number: 6 (lower is better) Translates to: TSYAGAPCSLWH*SLINQQAKNIA Trigger: TGCAATATTCTTTGCCTGCTGGTTGATGAGACTGCAATGCCAAAGGGAACAAGGGGCCCCGGCATAGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS TCA 72 bp | CTCGGATTCCCCCTTTCATCCCAGCATAACCGTGGATaGGGGAGCCATTCAGCCACTGAATATAGTAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LGFPLSSQHNRG*GSHSATEYSSC Trigger: ACAACTACTATATTCAGTGGCTGAATGGCTCCCTCATCCACGGTTATGCTGGGATGAAAGGGGGAATCCGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179191.6 |
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| CDS CCA 72 bp | AGTAGAATTCCCAGAGATCATATAAAGACTCCATACTaGCAGCATCACTGTCAATCAGGGCGGAAGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: SRIPRDHIKTPY*QHHCQSGRKPP Trigger: GGGTGGCTTCCGCCCTGATTGACAGTGATGCTGCCAGTATGGAGTCTTTATATGATCTCTGGGAATTCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS GCA 72 bp | GCATTGCAGTCTCATCAACCAGCAGGCAAAGAATATTaGACGCCACCAGGAGGACTGAAATGGATGTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: ALQSHQPAGKEY*TPPGGLKWMFQ Trigger: TTGAAACATCCATTTCAGTCCTCCTGGTGGCGTGCAATATTCTTTGCCTGCTGGTTGATGAGACTGCAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS GCA 72 bp | TACACAAGAGAAGCAGCAAGCATCCCATCAGCGAAATaGAAGAATACAAATAGGGCAAGTAGAATTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: YTREAASIPSAK*KNTNRASRIPR Trigger: TCTGGGAATTCTACTTGCCCTATTTGTATTCTTGCATTTCGCTGATGGGATGCTTGCTGCTTCTCTTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200564.5 |
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| CDS CAA 90 bp | TTAAGGATCTTTACATTCTCAAGTTCTTGCTCCAATTCCATTACATaGTACTCCACCGATGAAGATAGCCCATGTAGTCTTCTCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LRIFTFSSSCSNSIT*YSTDEDSPCSLLWS Trigger: ACTCCAGAGAAGACTACATGGGCTATCTTCATCGGTGGAGTACAATGTAATGGAATTGGAGCAAGAACTTGAGAATGTAAAGATCCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055195.11 ENSMUST00000179191.6 ENSMUST00000196321.5 ENSMUST00000198105.5 ENSMUST00000200149.2 ENSMUST00000200564.5 |
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