Pregenerated sensors for LMAN1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056271Ensembl transcript IDs: ENSMUST00000044937.5, ENSMUST00000093832.11
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTAATGCAGGCTCTAGAGAAAGGCTTCCTGTGGACAGGTACTCCTaGAGCCTCTTGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: GNAGSRERLPVDRYS*SLLSSSCLHQTPEV Trigger: GACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAGGCTTCAGGAGTACCTGTCCACAGGAAGCCTTTCTCTAGAGCCTGCATTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| 3UTR-3UTR GCA 90 bp | GTAAGACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCTTGTCCAGCTCCTaGCTGCACCAGACCCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: VRHGFELGQACMLGEMGCLLSSS*LHQTPE Trigger: CTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAG...ACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTCTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGTAATCCCCGGAGGTCCTTCTaGAGGAGGCTGAGGATATGG | + |
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Preference number: 2 (lower is better) Translates to: LGEMGCLLRTPIVLVMGNPRRSF*RRLRIW Trigger: CCATATCCTCAGCCTCCTGCAGAAGGACCTCCGGGG...ATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTaGTGGGTAATGCAGGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: ALSWVRLACWGRWAVSSEPLSSW*WVMQAL Trigger: TAGAGCCTGCATTACCCATCACCAGGACGATAGGGG...TTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| 3UTR-3UTR CCA 90 bp | CATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCGAGAAAGGCTTCCTGTaGACAGGTACTCCTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: HGFELGQACMLGEMGCLLEKGFL*TGTPEA Trigger: GGCTTCAGGAGTACCTGTCCACAGGAAGCCTTTCTC...GAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGTAATCCTTCTGCAGGAGGCTaGGGATATGGTCCAGTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LGEMGCLLRTPIVLVMGNPSAGG*GYGPVQ Trigger: TTGAACTGGACCATATCCTCAGCCTCCTGCAGAAGG...ATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| 3UTR TCA 72 bp | GGCTCTAGAGAAAGGCTTCCTGTGGACAGGTACTCCTaGAGCCTCTTGTCCAGCTCCTGCCTGCACCAGACC | + |
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Preference number: 3 (lower is better) Translates to: GSRERLPVDRYS*SLLSSSCLHQT Trigger: GGTCTGGTGCAGGCAGGAGCTGGACAAGAGGCTTCAGGAGTACCTGTCCACAGGAAGCCTTTCTCTAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| 3UTR TCA 72 bp | AGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTaGTGGGTAATGCAGGCTCTAGAGAAAGGCTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: RWAVSSEPLSSW*WVMQALEKGFL Trigger: CAGGAAGCCTTTCTCTAGAGCCTGCATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | TGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGGCTGAGGCGTCGAGGAGGGGGCTaGCTCCTTTCAGCACCGTGC | + |
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Preference number: 4 (lower is better) Translates to: CPAPACTRPRRSFCRRLRRRGGG*LLSAPC Trigger: GCACGGTGCTGAAAGGAGCCAGCCCCCTCCTCGACG...CCTCAGCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CCTCTTGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGGCCCTGGGCCATCTGCCTaGAGAGAGCCTGGAGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PLVQLLPAPDPGGPSAGGPGPSA*REPGGP Trigger: AGGCCCTCCAGGCTCTCTCCAGGCAGATGGCCCAGG...GCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CCTCTTGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGGCCCTTGGTGTACCACATaGCCACACCCTGGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PLVQLLPAPDPGGPSAGGPWCTT*PHPGLP Trigger: GGGGAGCCCAGGGTGTGGCCATGTGGTACACCAAGG...GCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCCACATGGCCACACCCTaGGCTCCCCGGCGTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DMALSWVRLACWGRWAVSHMATP*APRRPG Trigger: ACCAGGACGCCGGGGAGCCCAGGGTGTGGCCATGTG...GGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | CCTCTTGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGGCCCCAGCCCCAGGAACTaGCAGTCTTGGTCCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PLVQLLPAPDPGGPSAGGPSPRN*QSWSLE Trigger: TTCAAGGGACCAAGACTGGCAGTTCCTGGGGCTGGG...GCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR TCA 90 bp | CATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCGGTGCCAGTGGCTGCTaGGACCCCAAAGAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HGFELGQACMLGEMGCLLGASGC*DPKEAS Trigger: GGAGGCTTCTTTGGGGTCTCAGCAGCCACTGGCACC...GAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | GCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATTCAGCCTGGGCCATCTaGCTGGAGAGAGCCTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: AGSGLHAGGDGLSPQNPYSAWAI*LERAWR Trigger: CCTCCAGGCTCTCTCCAGGCAGATGGCCCAGGCTGA...ATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | CCAGTAAGACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCAGCCATCCGGGCAGCTaGTTCCCCAGCCTCCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PVRHGFELGQACMLGEMGSHPGS*FPSLPQ Trigger: CTGAGGGAGGCTGGGGAAGCAGCTGCCCGGATGGCT...GCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTCTTACTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CCTCTTGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGGCCCGGTTCTTCATGGATaGAACCAGCCGCACTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PLVQLLPAPDPGGPSAGGPVLHG*NQPHFL Trigger: GAGGAAGTGCGGCTGGTTCCATCCATGAAGAACCGG...GCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATGGCTCCCCGGCGTCCTaGTCCAGTCACTCTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: AGSGLHAGGDGLSPQNPYGSPAS*SSHSHL Trigger: CAGATGAGAGTGACTGGACCAGGACGCCGGGGAGCC...ATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR TCA 90 bp | CATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCTTCCTGAAGTCCCTGTaGCAGGAGCCAAGCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: HGFELGQACMLGEMGCLLFLKSL*QEPSSR Trigger: CCGGGAGCTTGGCTCCTGTCACAGGGACTTCAGGAA...GAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR TCA 90 bp | AGCCTCTTGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGCTGGCCAGGAGCAACTaGTCCTTCTCCATGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: SLLSSSCLHQTPEVLLQELARSN*SFSMNG Trigger: GCCATTCATGGAGAAGGATCAGTTGCTCCTGGCCAG...CTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | GCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATGCTTGTACTCAAACCTaGGTCGAGGAGGGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AGSGLHAGGDGLSPQNPYACTQT*VEEGAG Trigger: GCCAGCCCCCTCCTCGACGCAGGTTTGAGTACAAGC...ATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | TGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGGCTGAGGCCAGTCACTCTCATCTaGATCTCTACCTCCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: CPAPACTRPRRSFCRRLRPVTLI*ISTSQE Trigger: TTCCTGGGAGGTAGAGATGCAGATGAGAGTGACTGG...CCTCAGCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTCTTGAGCCCTGTCCTTaGTGTACCACATGGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ELGQACMLGEMGCLLRTPLEPCP*CTTWPH Trigger: GTGTGGCCATGTGGTACACCAAGGACAGGGCTCAAG...AGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | CCAGTAAGACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGCTCCTGGAGGTCATaGCCATCACTGGCCAGCACT | + |
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Preference number: 4 (lower is better) Translates to: PVRHGFELGQACMLGEMGCSWRS*PSLAST Trigger: AGTGCTGGCCAGTGATGGGCATGACCTCCAGGAGCA...GCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTCTTACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | CATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGAGCTGCTGTTTCCAGTaGTTCTCAGCCTGGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: HAGGDGLSPQNPYRPGDGSCCFQ*FSAWAI Trigger: GATGGCCCAGGCTGAGAAGCACTGGAAACAGCAGCT...CCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGAGGATGGCGTCTCCATaGTGGCTCCAGAAGGGTATC | + |
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Preference number: 4 (lower is better) Translates to: HAGGDGLSPQNPYRPGDGRMASP*WLQKGI Trigger: GATACCCTTCTGGAGCCACCATGGAGACGCCATCCT...CCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCCGCTCCGGTTCTTCATaGATGGAACCAGCCGCACTT | + |
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Preference number: 4 (lower is better) Translates to: HGFELGQACMLGEMGCLLRSGSS*MEPAAL Trigger: AAGTGCGGCTGGTTCCATCCATGAAGAACCGGAGCG...GAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | CATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGCTCCTTTCAGCACCGTaGAGAACCAGCAACAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: HAGGDGLSPQNPYRPGDGLLSAP*RTSNRE Trigger: TTCCCTGTTGCTGGTTCTGCACGGTGCTGAAAGGAG...CCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CCAGTAAGACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCCTGCTAAGGTGCCAGTaGCTGCTGAGACCCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: PVRHGFELGQACMLGEMGLLRCQ*LLRPQR Trigger: TCTTTGGGGTCTCAGCAGCCACTGGCACCTTAGCAG...GCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTCTTACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR TCA 90 bp | GTAAGACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTGGTTCCCTCAGACTaGAGGTCAGGAAGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: VRHGFELGQACMLGEMGCLVPSD*RSGRTG Trigger: TCCTGTCCTTCCTGACCTTCAGTCTGAGGGAACCAG...ACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGTAATATGGCGTCTCCATGGTaGCTCCAGAAGGGTATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LGEMGCLLRTPIVLVMGNMASPW*LQKGIP Trigger: TGGGATACCCTTCTGGAGCCACCATGGAGACGCCAT...ATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | ATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGTAATGCAGGCTCTAGCTCGGAAGGGGAATaGCCGGTTCCTGAAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: MGCLLRTPIVLVMGNAGSSSEGE*PVPEVP Trigger: AGGGACTTCAGGAACCGGCCATTCCCCTTCCGAGCT...AGAGCCTGCATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAATTCTCCATGAATGGCTaGGGGGTTTCCTCTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: ALSWVRLACWGRWAVSSEFSMNG*GVSSGP Trigger: AGGTCCAGAGGAAACCCCCCAGCCATTCATGGAGAA...TTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GTAAGACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTAGGGCCTGTAGGATCTaGCTTTGTCTGCCCAGCGTA | + |
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Preference number: 4 (lower is better) Translates to: VRHGFELGQACMLGEMGCRACRI*LCLPSV Trigger: TACGCTGGGCAGACAAAGCCAGATCCTACAGGCCCT...ACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTCTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | ATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGTAATGCAGGCTCTCAGTGCTTCTCAGCCTaGGCCATCTGCCTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: MGCLLRTPIVLVMGNAGSQCFSA*AICLER Trigger: TCTCTCCAGGCAGATGGCCCAGGCTGAGAAGCACTG...AGAGCCTGCATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | ATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGTAATGCAGGCTCTTTTCCATCCCCAGACTaGTCCTGGAGGTCATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: MGCLLRTPIVLVMGNAGSFPSPD*SWRSCP Trigger: TGGGCATGACCTCCAGGAGCAGTCTGGGGATGGAAA...AGAGCCTGCATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | CATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGCCTGGACATCACTGGTaGAGGAATCAAAGTAGATCC | + |
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Preference number: 4 (lower is better) Translates to: HAGGDGLSPQNPYRPGDGPGHHW*RNQSRS Trigger: GGATCTACTTTGATTCCTCCACCAGTGATGTCCAGG...CCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GTAAGACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTATGACAGGGCTGTCCTaGACATCACTGGTGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VRHGFELGQACMLGEMGCMTGLS*TSLVEE Trigger: TTCCTCCACCAGTGATGTCCAGGACAGCCCTGTCAT...ACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTCTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACTTCTTCCTGGGCTTTaGGATTCAGTGGTGGTATGC | + |
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Preference number: 4 (lower is better) Translates to: ALSWVRLACWGRWAVSSELLPGL*DSVVVC Trigger: GCATACCACCACTGAATCCCAAAGCCCAGGAAGAAG...TTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR GCA 90 bp | CTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGTAATACTGTAGACCCCAGCTaGTGTTTCCAGTGCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LGEMGCLLRTPIVLVMGNTVDPS*CFQCFS Trigger: TGAGAAGCACTGGAAACAGCAGCTGGGGTCTACAGT...ATTACCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | AGAACCCCTATCGTCCTGGTGATGGGTAATGCAGGCTCTAGAGAAAGGCTTCCTCCTCTAAGCCTAGGATaGCGTCTCCATGGTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RTPIVLVMGNAGSRERLPPLSLG*RLHGGS Trigger: GGAGCCACCATGGAGACGCCATCCTAGGCTTAGAGG...AGGAAGCCTTTCTCTAGAGCCTGCATTACCCATCACCAGGACGATAGGGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACTTTCACCTTCTTCCTaGGCTTTGGGATTCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ALSWVRLACWGRWAVSSELSPSS*ALGFSG Trigger: ACCACTGAATCCCAAAGCCCAGGAAGAAGGTGAAAG...TTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CAA 90 bp | TGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGGCTGAGGTCCCTCAGGCCGGACTaGGACTGTAGACCCCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: CPAPACTRPRRSFCRRLRSLRPD*DCRPQL Trigger: CAGCTGGGGTCTACAGTCCAAGTCCGGCCTGAGGGA...CCTCAGCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS GCA 90 bp | CCCTCAGGCCGGACTTGGACTGTAGACCCCAGCTGCTGTTTCCAGTaGTTCTCAGCCTGGGCCATCTGCCTGGAGAGAGCCTGGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PSGRTWTVDPSCCFQ*FSAWAICLERAWRA Trigger: GGCCCTCCAGGCTCTCTCCAGGCAGATGGCCCAGGCTGAGAAGCACTGGAAACAGCAGCTGGGGTCTACAGTCCAAGTCCGGCCTGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 90 bp | ACGCAGCCTCTGCCTCCAGTAGGTGACCCGAGCTCGGAAGGGGAATaGCCGGTTCCTGAAGTCCCTGTGACAGGAGCCAAGCTCCCGGAC | + |
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Preference number: 5 (lower is better) Translates to: TQPLPPVGDPSSEGE*PVPEVPVTGAKLPD Trigger: GTCCGGGAGCTTGGCTCCTGTCACAGGGACTTCAGGAACCGGCCATTCCCCTTCCGAGCTCGGGTCACCTACTGGAGGCAGAGGCTGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS TCA 90 bp | CTTGCAGGGCCTGGATCAGGGTCCGCTGTCCATAGAGCAGGGTGCTaGCCTTGGCAGTGTTCCAGCCTCCCTCAGGCCGGACTTGGACTG | + |
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Preference number: 5 (lower is better) Translates to: LAGPGSGSAVHRAGC*PWQCSSLPQAGLGL Trigger: CAGTCCAAGTCCGGCCTGAGGGAGGCTGGAACACTGCCAAGGTCAGCACCCTGCTCTATGGACAGCGGACCCTGATCCAGGCCCTGCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093832.11 |
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| CDS CCA 90 bp | ATGAGGCTAGCTCCTCTACAACAGAGCCGACTTGAGCCCTGTCCTTaGTGTACCACATGGCCACACCCTGGGCTCCCCGGCGTCCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: MRLAPLQQSRLEPCP*CTTWPHPGLPGVLV Trigger: GACCAGGACGCCGGGGAGCCCAGGGTGTGGCCATGTGGTACACCAAGGACAGGGCTCAAGTCGGCTCTGTTGTAGAGGAGCTAGCCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 90 bp | GACATGTGGAGGATCCTAGAAGCCAGCCAGATGGGCGAGGGGCCTTaGCTGTCTTCTTCACCAGACCCCGGAGGTCCTTCTGCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: DMWRILEASQMGEGP*LSSSPDPGGPSAGG Trigger: GCCTCCTGCAGAAGGACCTCCGGGGTCTGGTGAAGAAGACAGCCAAGGCCCCTCGCCCATCTGGCTGGCTTCTAGGATCCTCCACATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093832.11 |
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| CDS-3UTR CAA 90 bp | GAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTTGCCCAGGGCCAGCCTaGCCTTCAGTTCTTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ELGQACMLGEMGCLLRTPCPGPA*PSVLPA Trigger: AGCTGGAAGAACTGAAGGCAAGGCTGGCCCTGGGCA...AGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS TCA 90 bp | CCGATGCCATCCCATGAGGCTAGCTCCTCTACAACAGAGCCGACTTaGGCCCTGTCCTTGGTGTACCACATGGCCACACCCTGGGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: PMPSHEASSSTTEPT*ALSLVYHMATPWAP Trigger: GGGAGCCCAGGGTGTGGCCATGTGGTACACCAAGGACAGGGCTCAAGTCGGCTCTGTTGTAGAGGAGCTAGCCTCATGGGATGGCATCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS GCA 90 bp | CCAAGCTCCCGGACATTTCCATCCCCAGACTGCTCCTGGAGGTCATaGCCATCACTGGCCAGCACTCGGATGACAGGGCTGTCCTGGACA | + |
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Preference number: 5 (lower is better) Translates to: PSSRTFPSPDCSWRS*PSLASTRMTGLSWT Trigger: TGTCCAGGACAGCCCTGTCATCCGAGTGCTGGCCAGTGATGGGCATGACCTCCAGGAGCAGTCTGGGGATGGAAATGTCCGGGAGCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 90 bp | AGGGTGCTGACCTTGGCAGTGTTCCAGCCTCCCTCAGGCCGGACTTaGACTGTAGACCCCAGCTGCTGTTTCCAGTGCTTCTCAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RVLTLAVFQPPSGRT*TVDPSCCFQCFSAW Trigger: CCAGGCTGAGAAGCACTGGAAACAGCAGCTGGGGTCTACAGTCCAAGTCCGGCCTGAGGGAGGCTGGAACACTGCCAAGGTCAGCACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093832.11 |
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| CDS GCA 90 bp | TACTCAAACCTGCGTCGAGGAGGGGGCTGGCTCCTTTCAGCACCGTaGAGAACCAGCAACAGGGAAAGGAGGCAGAGGGAAGGTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: YSNLRRGGGWLLSAP*RTSNRERRQREGER Trigger: CCTCTCACCTTCCCTCTGCCTCCTTTCCCTGTTGCTGGTTCTGCACGGTGCTGAAAGGAGCCAGCCCCCTCCTCGACGCAGGTTTGAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS-3UTR CAA 90 bp | AGCCTCTTGTCCAGCTCCTGCCTGCACCAGACCCCGGAGGTCCTTCTGCAGGAGCCCTTGAAGCTGAGCTaGTACTCAAACCTGCGTCGA | + |
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Preference number: 5 (lower is better) Translates to: SLLSSSCLHQTPEVLLQEPLKLS*YSNLRR Trigger: TCGACGCAGGTTTGAGTACAAGCTCAGCTTCAAGGG...CTCCTGCAGAAGGACCTCCGGGGTCTGGTGCAGGCAGGAGCTGGACAAGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CAA 90 bp | GCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATAAGGAGACAGAGATGTaGCTCCACACGGCACCGCTC | + |
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Preference number: 5 (lower is better) Translates to: AGSGLHAGGDGLSPQNPYKETEM*LHTAPL Trigger: GAGCGGTGCCGTGTGGAGCAACATCTCTGTCTCCTT...ATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS GCA 90 bp | GGCGTCTCCATGGTGGCTCCAGAAGGGTATCCCAGCCCCAGGAACTaGCAGTCTTGGTCCCTTGAAGCTGAGCTTGTACTCAAACCTGCG | + |
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Preference number: 5 (lower is better) Translates to: GVSMVAPEGYPSPRN*QSWSLEAELVLKPA Trigger: CGCAGGTTTGAGTACAAGCTCAGCTTCAAGGGACCAAGACTGGCAGTTCCTGGGGCTGGGATACCCTTCTGGAGCCACCATGGAGACGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 90 bp | CCCTTGAAGCTGAGCTTGTACTCAAACCTGCGTCGAGGAGGGGGCTaGCTCCTTTCAGCACCGTGCAGAACCAGCAACAGGGAAAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: PLKLSLYSNLRRGGG*LLSAPCRTSNRERR Trigger: CCTCCTTTCCCTGTTGCTGGTTCTGCACGGTGCTGAAAGGAGCCAGCCCCCTCCTCGACGCAGGTTTGAGTACAAGCTCAGCTTCAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS TCA 90 bp | AAAGTGATGCTTAGTGCCCACAGGCAGGTAGAAGACGTGTGCTCCTaGAGCCATCCGGGCAGCTGCTTCCCTCATCTCTTGCAGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: KVMLSAHRQVEDVCS*SHPGSCFPHLLQGL Trigger: CAGGCCCTGCAAGAGATGAGGGAAGCAGCTGCCCGGATGGCTTCAGGAGCACACGTCTTCTACCTGCCTGTGGGCACTAAGCATCACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093832.11 |
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| CDS CCA 90 bp | AGGAGACAGAGATGTTGCTCCACACGGCACCGCTCCGGTTCTTCATaGATGGAACCAGCCGCACTTCCTCTAAGCCTAGGATGGCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RRQRCCSTRHRSGSS*MEPAALPLSLGWRL Trigger: GAGACGCCATCCTAGGCTTAGAGGAAGTGCGGCTGGTTCCATCCATGAAGAACCGGAGCGGTGCCGTGTGGAGCAACATCTCTGTCTCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 90 bp | GCCTGGGCCATCTGCCTGGAGAGAGCCTGGAGGGCCTGTAGGATCTaGCTTTGTCTGCCCAGCGTATCCTCCAGGTTAAAGAACCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: AWAICLERAWRACRI*LCLPSVSSRLKNLS Trigger: TGAAAGGTTCTTTAACCTGGAGGATACGCTGGGCAGACAAAGCCAGATCCTACAGGCCCTCCAGGCTCTCTCCAGGCAGATGGCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS-3UTR CAA 90 bp | CATGCTGGGGGAGATGGGCTGTCTCCTCAGAACCCCTATCGTCCTGGTGATGGGGCCAGTCTTGGTCCCTaGAAGCTGAGCTTGTACTCA | + |
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Preference number: 5 (lower is better) Translates to: HAGGDGLSPQNPYRPGDGASLGP*KLSLYS Trigger: TGAGTACAAGCTCAGCTTCAAGGGACCAAGACTGGC...CCCATCACCAGGACGATAGGGGTTCTGAGGAGACAGCCCATCTCCCCCAGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS-3UTR CAA 90 bp | GACATGGCTTTGAGCTGGGTCAGGCTTGCATGCTGGGGGAGATGGGCTGTCTCCCCTTCTTCCTGGGCTTaGGGATTCAGTGGTGGTATG | + |
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Preference number: 5 (lower is better) Translates to: DMALSWVRLACWGRWAVSPSSWA*GFSGGM Trigger: CATACCACCACTGAATCCCAAAGCCCAGGAAGAAGG...GGAGACAGCCCATCTCCCCCAGCATGCAAGCCTGACCCAGCTCAAAGCCATGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044937.5 |
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| CDS TCA 90 bp | CAGACTGCTCCTGGAGGTCATGCCCATCACTGGCCAGCACTCGGATaGCAGGGCTGTCCTGGACATCACTGGTGGAGGAATCAAAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: QTAPGGHAHHWPALG*QGCPGHHWWRNQSR Trigger: TCTACTTTGATTCCTCCACCAGTGATGTCCAGGACAGCCCTGTCATCCGAGTGCTGGCCAGTGATGGGCATGACCTCCAGGAGCAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS GCA 90 bp | TCATCTGCATCTCTACCTCCCAGGAAGGGAAGGAGACAGAGATGTTaGTCCACACGGCACCGCTCCGGTTCTTCATGGATGGAACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SSASLPPRKGRRQRC*STRHRSGSSWMEPA Trigger: GGCTGGTTCCATCCATGAAGAACCGGAGCGGTGCCGTGTGGAGCAACATCTCTGTCTCCTTCCCTTCCTGGGAGGTAGAGATGCAGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 90 bp | CTGCCCAGCGTATCCTCCAGGTTAAAGAACCTTTCACCTTCTTCCTaGGCTTTGGGATTCAGTGGTGGTATGCTAGCCTCTCTGGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LPSVSSRLKNLSPSS*ALGFSGGMLASLVP Trigger: GGGCACCAGAGAGGCTAGCATACCACCACTGAATCCCAAAGCCCAGGAAGAAGGTGAAAGGTTCTTTAACCTGGAGGATACGCTGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | CAGAGCCGACTTGAGCCCTGTCCTTGGTGTACCACATaGCCACACCCTGGGCTCCCCGGCGTCCTGGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: QSRLEPCPWCTT*PHPGLPGVLVQ Trigger: CTGGACCAGGACGCCGGGGAGCCCAGGGTGTGGCCATGTGGTACACCAAGGACAGGGCTCAAGTCGGCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS GCA 72 bp | CTGCGTCGAGGAGGGGGCTGGCTCCTTTCAGCACCGTaGAGAACCAGCAACAGGGAAAGGAGGCAGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRRGGGWLLSAP*RTSNRERRQRE Trigger: TTCCCTCTGCCTCCTTTCCCTGTTGCTGGTTCTGCACGGTGCTGAAAGGAGCCAGCCCCCTCCTCGACGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | CTGCCTCCAGTAGGTGACCCGAGCTCGGAAGGGGAATaGCCGGTTCCTGAAGTCCCTGTGACAGGAGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LPPVGDPSSEGE*PVPEVPVTGAK Trigger: CTTGGCTCCTGTCACAGGGACTTCAGGAACCGGCCATTCCCCTTCCGAGCTCGGGTCACCTACTGGAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | CTGAGCTTGTACTCAAACCTGCGTCGAGGAGGGGGCTaGCTCCTTTCAGCACCGTGCAGAACCAGCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: LSLYSNLRRGGG*LLSAPCRTSNR Trigger: CCTGTTGCTGGTTCTGCACGGTGCTGAAAGGAGCCAGCCCCCTCCTCGACGCAGGTTTGAGTACAAGCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | ACCTTGGCAGTGTTCCAGCCTCCCTCAGGCCGGACTTaGACTGTAGACCCCAGCTGCTGTTTCCAGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLAVFQPPSGRT*TVDPSCCFQCF Trigger: GAAGCACTGGAAACAGCAGCTGGGGTCTACAGTCCAAGTCCGGCCTGAGGGAGGCTGGAACACTGCCAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093832.11 |
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| CDS TCA 72 bp | TCCCATGAGGCTAGCTCCTCTACAACAGAGCCGACTTaGGCCCTGTCCTTGGTGTACCACATGGCCACACCC | + |
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Preference number: 6 (lower is better) Translates to: SHEASSSTTEPT*ALSLVYHMATP Trigger: GGGTGTGGCCATGTGGTACACCAAGGACAGGGCTCAAGTCGGCTCTGTTGTAGAGGAGCTAGCCTCATGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS TCA 72 bp | CTTAGTGCCCACAGGCAGGTAGAAGACGTGTGCTCCTaGAGCCATCCGGGCAGCTGCTTCCCTCATCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LSAHRQVEDVCS*SHPGSCFPHLL Trigger: CAAGAGATGAGGGAAGCAGCTGCCCGGATGGCTTCAGGAGCACACGTCTTCTACCTGCCTGTGGGCACTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093832.11 |
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| CDS CCA 72 bp | ACAGGACGTCATGGTCATCTGCTGCTAAGGTGCCAGTaGCTGCTGAGACCCCAAAGAAGCCTCCAGGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: TGRHGHLLLRCQ*LLRPQRSLQGL Trigger: TAGCCCCTGGAGGCTTCTTTGGGGTCTCAGCAGCCACTGGCACCTTAGCAGCAGATGACCATGACGTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | CCTTTCACCTTCTTCCTGGGCTTTGGGATTCAGTGGTaGTATGCTAGCCTCTCTGGTGCCCAGGGCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PFTFFLGFGIQW*YASLSGAQGQP Trigger: AGGCTGGCCCTGGGCACCAGAGAGGCTAGCATACCACCACTGAATCCCAAAGCCCAGGAAGAAGGTGAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS GCA 72 bp | TCTCTACCTCCCAGGAAGGGAAGGAGACAGAGATGTTaGTCCACACGGCACCGCTCCGGTTCTTCATGGATG | + |
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Preference number: 6 (lower is better) Translates to: SLPPRKGRRQRC*STRHRSGSSWM Trigger: CATCCATGAAGAACCGGAGCGGTGCCGTGTGGAGCAACATCTCTGTCTCCTTCCCTTCCTGGGAGGTAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | AGATGTTGCTCCACACGGCACCGCTCCGGTTCTTCATaGATGGAACCAGCCGCACTTCCTCTAAGCCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: RCCSTRHRSGSS*MEPAALPLSLG Trigger: TCCTAGGCTTAGAGGAAGTGCGGCTGGTTCCATCCATGAAGAACCGGAGCGGTGCCGTGTGGAGCAACATCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | TCCCTCAGACTGAAGGTCAGGAAGGACAGGACGTCATaGTCATCTGCTGCTAAGGTGCCAGTGGCTGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLRLKVRKDRTS*SSAAKVPVAAE Trigger: CTCAGCAGCCACTGGCACCTTAGCAGCAGATGACCATGACGTCCTGTCCTTCCTGACCTTCAGTCTGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | GAACCTTTCACCTTCTTCCTGGGCTTTGGGATTCAGTaGTGGTATGCTAGCCTCTCTGGTGCCCAGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: EPFTFFLGFGIQ*WYASLSGAQGQ Trigger: CTGGCCCTGGGCACCAGAGAGGCTAGCATACCACCACTGAATCCCAAAGCCCAGGAAGAAGGTGAAAGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CCA 72 bp | ATCTGCCTGGAGAGAGCCTGGAGGGCCTGTAGGATCTaGCTTTGTCTGCCCAGCGTATCCTCCAGGTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: ICLERAWRACRI*LCLPSVSSRLK Trigger: CTTTAACCTGGAGGATACGCTGGGCAGACAAAGCCAGATCCTACAGGCCCTCCAGGCTCTCTCCAGGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS TCA 72 bp | GGCTCTAGAGAAAGGCTTCCTGTGGACAGGTACTCCTaGAGCCTCTTGTCCAGCTCCTGCCTGCTGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GSRERLPVDRYS*SLLSSSCLLKF Trigger: GAACTTCAGCAGGCAGGAGCTGGACAAGAGGCTTCAGGAGTACCTGTCCACAGGAAGCCTTTCTCTAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093832.11 |
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| CDS CAA 90 bp | AGCGTATCCTCCAGGTTAAAGAACCTTTCACCTTCTTCCTGGGCTTaGGGATTCAGTGGTGGTATGCTAGCCTCTCTGGTGCCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SVSSRLKNLSPSSWA*GFSGGMLASLVPRA Trigger: GGCCCTGGGCACCAGAGAGGCTAGCATACCACCACTGAATCCCAAAGCCCAGGAAGAAGGTGAAAGGTTCTTTAACCTGGAGGATACGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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| CDS CAA 72 bp | TCCAGGTTAAAGAACCTTTCACCTTCTTCCTGGGCTTaGGGATTCAGTGGTGGTATGCTAGCCTCTCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: SRLKNLSPSSWA*GFSGGMLASLV Trigger: CACCAGAGAGGCTAGCATACCACCACTGAATCCCAAAGCCCAGGAAGAAGGTGAAAGGTTCTTTAACCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044937.5 ENSMUST00000093832.11 |
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