Pregenerated sensors for LMAN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041891Ensembl transcript IDs: ENSMUST00000048260.15, ENSMUST00000120461.9, ENSMUST00000143990.2, ENSMUST00000236866.2
Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGGGCTTTGGCAGGCAAGCTTCACCATGGGCGCGGTTATGCTCTaGCATGAGCCAAAGATGATTGTACAGGTTTCAGAGTCATCACCC | + |
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Preference number: 1 (lower is better) Translates to: QGLWQASFTMGAVML*HEPKMIVQVSESSP Trigger: GGGTGATGACTCTGAAACCTGTACAATCATCTTTGGCTCATGGCAGAGCATAACCGCGCCCATGGTGAAGCTTGCCTGCCAAAGCCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 90 bp | ATGCTAGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAGTaGGTTTTGTGGAGTCACTGTGAGTGTGCTGTGACACTTCTAGGA | + |
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Preference number: 1 (lower is better) Translates to: MLAPQRRKQEHCVLQ*VLWSHCECAVTLLG Trigger: TCCTAGAAGTGTCACAGCACACTCACAGTGACTCCACAAAACTCACTGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCTAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR CCA 90 bp | TACTTCCCCTTGGACTTGAGCCTGAAAGTGTACACTGCCCAGATTTaGGATTCCTTTAGCATTCAGGCACACATGACTGCGGACTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: YFPLDLSLKVYTAQI*DSFSIQAHMTADFV Trigger: TACAAAGTCCGCAGTCATGTGTGCCTGAATGCTAAAGGAATCCCAAATCTGGGCAGTGTACACTTTCAGGCTCAAGTCCAAGGGGAAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 90 bp | CCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGTCTTaGAGCCAGCGAAAGTCTAGCCCAGCTGTGAAAAGAAAAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: PIANEPITLVRGKLS*SQRKSSPAVKRKVK Trigger: TTTCACTTTTCTTTTCACAGCTGGGCTAGACTTTCGCTGGCTTCAAGACAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR TCA 90 bp | CCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGTCTTaGAGCCAGCGAAAGTCTAGCCCAGATGATGTACATATAGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: PIANEPITLVRGKLS*SQRKSSPDDVHIGK Trigger: TTTTCCTATATGTACATCATCTGGGCTAGACTTTCGCTGGCTTCAAGACAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048260.15 |
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| 3UTR TCA 90 bp | GTCTCAATCCAAGGCACCTGTAAAATACTTGCTGGTGTGAGAAGTTaGATTATTCCAATCACACAAGACACTACAGACATGAAGGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: VSIQGTCKILAGVRS*IIPITQDTTDMKEF Trigger: GAACTCCTTCATGTCTGTAGTGTCTTGTGTGATTGGAATAATTCAACTTCTCACACCAGCAAGTATTTTACAGGTGCCTTGGATTGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCTTCCTCCAACCAGCATGTGGGCGCTGCAGAGTCAGCATGGGTAACCACGCGCGGCATCTGAGATaGGCAGTGGTGACCGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: TAFLQPACGRCRVSMGNHARHLR*AVVTVR Trigger: CCTGACGGTCACCACTGCTCATCTCAGATGCCGCGC...GTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGAGGAAGGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCCTCACGCTAGTGACGTaGGCGGCATCTGAGATGAGC | + |
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Preference number: 2 (lower is better) Translates to: KFLMTKAFTAFLQPACGRLTLVT*AASEMS Trigger: GCTCATCTCAGATGCCGCGCACGTCACTAGCGTGAG...GCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCAGCCCACCTGAGTTGTaGCATGGATGGACTCGAATT | + |
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Preference number: 2 (lower is better) Translates to: PSKPFPYPHSSACHLSVCSPPEL*HGWTRI Trigger: AATTCGAGTCCATCCATGTCACAACTCAGGTGGGCT...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | GCGGCATCTGAGATGAGCAGTGGTGACCGTCAGGAAGGCAAGGGCTTTGGCAGGATGCCTTTGGTTACATaGATAGGGTGCTCTTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: AASEMSSGDRQEGKGFGRMPLVT*IGCSCL Trigger: TAAACAAGAGCACCCTATTCATGTAACCAAAGGCAT...CCTGCCAAAGCCCTTGCCTTCCTGACGGTCACCACTGCTCATCTCAGATGCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGTCAAATGCTAGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAAATGCCAGCAGAAAATaGAAGACTGCACACACGGTG | + |
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Preference number: 2 (lower is better) Translates to: RVSNASSTEEEAGALCAANASRK*KTAHTV Trigger: CACCGTGTGTGCAGTCTTGCATTTTCTGCTGGCATT...TGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCTAGCATTTGACACTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCGGCGCGGTTATGCTCTaGCATGAGCCAAAGATGATT | + |
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Preference number: 2 (lower is better) Translates to: KFLMTKAFTAFLQPACGRGAVML*HEPKMI Trigger: AATCATCTTTGGCTCATGGCAGAGCATAACCGCGCC...GCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCGCCATGAGCCAAAGATaGTTGTACAGGTTTCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: KFLMTKAFTAFLQPACGRAMSQR*LYRFQS Trigger: ACTCTGAAACCTGTACAATCATCTTTGGCTCATGGC...GCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCCTACCACAGACTCACTaGCATTTAAAGACATGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: PSKPFPYPHSSACHLSVCLPQTH*HLKTCS Trigger: ACTACATGTCTTTAAATGTCAGTGAGTCTGTGGTAG...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCTCCGAGAGCAGCAGGTGAGCAACCCTTATTCAAGTCTTTCCCATTTTCCTTGTCACCTGTCAGTGTaGCATGTCTGTGGTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ILREQQVSNPYSSLSHFPCHLSV*HVCGVW Trigger: CCAGACACCACAGACATGGCACACTGACAGGTGACA...AGGAAAATGGGAAAGACTTGAATAAGGGTTGCTCACCTGCTGCTCTCGGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCACCCTGATCTCACAAAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCACAGAGCAGGGTTTTaGTCAGAAGTGAGCTATTTA | + |
|
Preference number: 2 (lower is better) Translates to: SHPDLTKFLMTKAFTAFLHRAGF*SEVSYL Trigger: TAAATAGCTCACTTCTGAGCAAAACCCTGCTCTGTG...GAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTTTGTGAGATCAGGGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCCTGATCTCACAAAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCTACACTGCCCAGATTTaGGATTCCTTTAGCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: SHPDLTKFLMTKAFTAFLYTAQI*DSFSIQ Trigger: CTGAATGCTAAAGGAATCCCAAATCTGGGCAGTGTA...GAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTTTGTGAGATCAGGGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR CAA 90 bp | TCTGAAGCCCACCTGAGTTGTGACATGGATGGACTCGAATTGGCCTaGGAATCTGTATTCTTAATAAGCATTCCAGGAACTGAATGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SEAHLSCDMDGLELA*ESVFLISIPGTEWL Trigger: CAACCATTCAGTTCCTGGAATGCTTATTAAGAATACAGATTCCAAGGCCAATTCGAGTCCATCCATGTCACAACTCAGGTGGGCTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCACAATGTAAGTGTTCTCATAAAGTCTTCTATAGATTTCAGGTTGTCAGACCGACTAACTCTGGGCTaGCAGCAACTCTTTCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: CHNVSVLIKSSIDFRLSDRLTLG*QQLFPA Trigger: GGCTGGAAAGAGTTGCTGTCAGCCCAGAGTTAGTCG...GTCTGACAACCTGAAATCTATAGAAGACTTTATGAGAACACTTACATTGTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTCCGAGAGCAGCAGGTGAGCAACCCTTATTCAAGTCTTTCCCATTTTCCTTACACTGCCCAGATTTaGGATTCCTTTAGCATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: ILREQQVSNPYSSLSHFPYTAQI*DSFSIQ Trigger: CTGAATGCTAAAGGAATCCCAAATCTGGGCAGTGTA...AGGAAAATGGGAAAGACTTGAATAAGGGTTGCTCACCTGCTGCTCTCGGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTCCGAGAGCAGCAGGTGAGCAACCCTTATTCAAGTCTTTCCCATTTTCCTAATGCAAATGACACTTaGGAGGAAACTTACAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: ILREQQVSNPYSSLSHFPNANDT*EETYKG Trigger: GCCTTTGTAAGTTTCCTCTCAAGTGTCATTTGCATT...AGGAAAATGGGAAAGACTTGAATAAGGGTTGCTCACCTGCTGCTCTCGGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR CAA 90 bp | GCCTTGGAATCTGTATTCTTAATAAGCATTCCAGGAACTGAATGGTaGGCCCATGGGCCATACTCTGAAAAACACTTATGTGCCTTCAAT | + |
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Preference number: 2 (lower is better) Translates to: ALESVFLISIPGTEW*AHGPYSEKHLCAFN Trigger: ATTGAAGGCACATAAGTGTTTTTCAGAGTATGGCCCATGGGCCAACCATTCAGTTCCTGGAATGCTTATTAAGAATACAGATTCCAAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCACAATGTAAGTGTTCTCATAAAGTCTTCTATAGATTTCAGGTTGTCAGACAGCAGGAGCACTGTGTaGTGCAGTGAGTTTTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CHNVSVLIKSSIDFRLSDSRSTV*CSEFCG Trigger: TCCACAAAACTCACTGCAGCACACAGTGCTCCTGCT...GTCTGACAACCTGAAATCTATAGAAGACTTTATGAGAACACTTACATTGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCAGTGATAATTTCCCACAGAGCAGGGTTTTGCTCAGAAGTGAGCTATTTAGGCAAGAAACTAGTTaGTTTTTCCACCAAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: SGSDNFPQSRVLLRSELFRQETS*FFHQNL Trigger: GAGATTTTGGTGGAAAAACCAACTAGTTTCTTGCCT...AAATAGCTCACTTCTGAGCAAAACCCTGCTCTGTGGGAAATTATCACTGCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCACAATGTAAGTGTTCTCATAAAGTCTTCTATAGATTTCAGGTTGTCAGACCCATGGGCCATACTCTaGAAAACACTTATGTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: CHNVSVLIKSSIDFRLSDPWAIL*KTLMCL Trigger: AAGGCACATAAGTGTTTTTCAGAGTATGGCCCATGG...GTCTGACAACCTGAAATCTATAGAAGACTTTATGAGAACACTTACATTGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR TCA 90 bp | CAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACTCTAGCCCAGATACATaGTGTACATATAGGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: QQFWKDILNSVVLDPIANSSPDT*CTYRKM Trigger: CATTTTCCTATATGTACATCATGTATCTGGGCTAGA...GTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120461.9 |
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| 3UTR GCA 72 bp | GCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCTaGAGAGTCAGCATGGGTAACCACAGCGGGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: AFTAFLQPACGR*RVSMGNHSGLS Trigger: GGACAGCCCGCTGTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAACCAGCATGTGGGCGCTGCAGAGTCAGCATGGGTAACCACAGCGGGCTGTCCAGTGTACTTCCCCTaGGACTTGAGCCTGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SNQHVGAAESAWVTTAGCPVYFP*DLSLKV Trigger: CACTTTCAGGCTCAAGTCCAAGGGGAAGTACACTGG...ACAGCCCGCTGTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR CCA 72 bp | ACCCGGGAGCCGAGAGGTCAGCCGACAACCCGGACTTaGTTTGTAGTTGTTAGTGAGTGGAGAGTTGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: TREPRGQPTTRT*FVVVSEWRVGE Trigger: CTCACCAACTCTCCACTCACTAACAACTACAAACCAAGTCCGGGTTGTCGGCTGACCTCTCGGCTCCCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | CCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAGTaGGTTTTGTGGAGTCACTGTGAGTGTGCTGTGACA | + |
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Preference number: 3 (lower is better) Translates to: PQRRKQEHCVLQ*VLWSHCECAVT Trigger: TGTCACAGCACACTCACAGTGACTCCACAAAACTCACTGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | CCACAGCCAGTGGCTGCCCCGACTGTCTTTAAGTCTTaGCTTGCCATTACTCTGTTCAGAGGCTGCACTCTG | + |
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Preference number: 3 (lower is better) Translates to: PQPVAAPTVFKS*LAITLFRGCTL Trigger: CAGAGTGCAGCCTCTGAACAGAGTAATGGCAAGTCAAGACTTAAAGACAGTCGGGGCAGCCACTGGCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR GCA 72 bp | ATTCAAGTCTTTCCCATTTTCCTCACGCTAGTGACGTaGGCGGCATCTGAGATGAGCAGTGGTGACCGTCAG | + |
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Preference number: 3 (lower is better) Translates to: IQVFPIFLTLVT*AASEMSSGDRQ Trigger: CTGACGGTCACCACTGCTCATCTCAGATGCCGCGCACGTCACTAGCGTGAGGAAAATGGGAAAGACTTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | GGCAAGCTTCACCATGGGCGCGGTTATGCTCTGCCATaGGCCAAAGATGATTGTACAGGTTTCAGAGTCATC | + |
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Preference number: 3 (lower is better) Translates to: GKLHHGRGYALP*AKDDCTGFRVI Trigger: GATGACTCTGAAACCTGTACAATCATCTTTGGCTCATGGCAGAGCATAACCGCGCCCATGGTGAAGCTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR CCA 72 bp | CCAATAATAGACACAGAGGGTATCACCCACAGCCAGTaGCTGCCCCGACTGTCTTTAAGTCTTGACTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: PIIDTEGITHSQ*LPRLSLSLDLP Trigger: TGGCAAGTCAAGACTTAAAGACAGTCGGGGCAGCCACTGGCTGTGGGTGATACCCTCTGTGTCTATTATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | GCACTGTGTGCTGCAGTGAGTTTTGTGGAGTCACTGTaGGTGTGCTGTGACACTTCTAGGATAAATGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: ALCAAVSFVESL*VCCDTSRINAS Trigger: GCTGGCATTTATCCTAGAAGTGTCACAGCACACTCACAGTGACTCCACAAAACTCACTGCAGCACACAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | GTCTCAGTGACAGTGAAAATGTGCATGGCTCGGCTCTaGGCCCATAATAAACACCCAGCAAACCTTTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: VSVTVKMCMARL*AHNKHPANLSP Trigger: AGGGGAAAGGTTTGCTGGGTGTTTATTATGGGCTCAGAGCCGAGCCATGCACATTTTCACTGTCACTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | AGATGGTTTCGCAAATCCCTACGACTAACTCTGGGCTaGCAGCAACTCTTTCCAGCCCAGTGTTTCCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: RWFRKSLRLTLG*QQLFPAQCFLV Trigger: AACCAGGAAACACTGGGCTGGAAAGAGTTGCTGTCAGCCCAGAGTTAGTCGTAGGGATTTGCGAAACCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCTGCTGGTGTGAGAAGTaGAATTATTCCAATCACACA | + |
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Preference number: 3 (lower is better) Translates to: PSKPFPYPHSSACHLSVCCWCEK*NYSNHT Trigger: TGTGTGATTGGAATAATTCAACTTCTCACACCAGCA...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR CCA 72 bp | TTGGACTTGAGCCTGAAAGTGTACACTGCCCAGATTTaGGATTCCTTTAGCATTCAGGCACACATGACTGCG | + |
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Preference number: 3 (lower is better) Translates to: LDLSLKVYTAQI*DSFSIQAHMTA Trigger: CGCAGTCATGTGTGCCTGAATGCTAAAGGAATCCCAAATCTGGGCAGTGTACACTTTCAGGCTCAAGTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | AACGAGCCCATTACTTTAGTAAGAGGTAAATTGTCTTaGAGCCAGCGAAAGTCTAGCCCAGCTGTGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: NEPITLVRGKLS*SQRKSSPAVKR Trigger: TCTTTTCACAGCTGGGCTAGACTTTCGCTGGCTTCAAGACAATTTACCTCTTACTAAAGTAATGGGCTCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR TCA 72 bp | AACGAGCCCATTACTTTAGTAAGAGGTAAATTGTCTTaGAGCCAGCGAAAGTCTAGCCCAGATGATGTACAT | + |
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Preference number: 3 (lower is better) Translates to: NEPITLVRGKLS*SQRKSSPDDVH Trigger: ATGTACATCATCTGGGCTAGACTTTCGCTGGCTTCAAGACAATTTACCTCTTACTAAAGTAATGGGCTCGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048260.15 |
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| 3UTR TCA 72 bp | TGTTCAGAGGCTGCACTCTGCCTACCACAGACTCACTaGCATTTAAAGACATGTAGTACTATGAACAAAATG | + |
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Preference number: 3 (lower is better) Translates to: CSEAALCLPQTH*HLKTCSTMNKM Trigger: CATTTTGTTCATAGTACTACATGTCTTTAAATGTCAGTGAGTCTGTGGTAGGCAGAGTGCAGCCTCTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| 3UTR CCA 72 bp | GAATCTGTATTCTTAATAAGCATTCCAGGAACTGAATaGTTGGCCCATGGGCCATACTCTGAAAAACACTTA | + |
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Preference number: 3 (lower is better) Translates to: ESVFLISIPGTE*LAHGPYSEKHL Trigger: TAAGTGTTTTTCAGAGTATGGCCCATGGGCCAACCATTCAGTTCCTGGAATGCTTATTAAGAATACAGATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCCTTCAATACATGATAAAATACTGGTTATTGTCTGTGACTTCACGGTGAAGCTTGGGTTACAGAGATaGAATGTAAACCAGAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: VPSIHDKILVIVCDFTVKLGLQR*NVNQSV Trigger: TACACTCTGGTTTACATTCAATCTCTGTAACCCAAG...CTTCACCGTGAAGTCACAGACAATAACCAGTATTTTATCATGTATTGAAGGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | TCCAACCAGCATGTGGGCGCTGCAGAGTCAGCATGGGTAACCACAGCGGGCTGTCCTGCTGAGCCCGGGTaGTGGATGCCACTCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: SNQHVGAAESAWVTTAGCPAEPG*WMPLTS Trigger: GCTGGTGAGTGGCATCCAGCACCCGGGCTCAGCAGG...ACAGCCCGCTGTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | GCGGCATCTGAGATGAGCAGTGGTGACCGTCAGGAAGGCAAGGGCTTTGGCAGGATGTCATCCGCTGGCTaGCCCTGGAGGTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AASEMSSGDRQEGKGFGRMSSAG*PWRSGW Trigger: CCACCCTGACCTCCAGGGGCAGCCAGCGGATGACAT...CCTGCCAAAGCCCTTGCCTTCCTGACGGTCACCACTGCTCATCTCAGATGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAGTGAGTTTTGTGGAGATGTCATCCGCTGGCTaGCCCTGGAGGTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTEEEAGALCAAVSFVEMSSAG*PWRSGW Trigger: CCACCCTGACCTCCAGGGGCAGCCAGCGGATGACAT...CTCCACAAAACTCACTGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCCCTGCTGAGCCCGGGTaGTGGATGCCACTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KFLMTKAFTAFLQPACGRPAEPG*WMPLTS Trigger: GCTGGTGAGTGGCATCCAGCACCCGGGCTCAGCAGG...GCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | TCCCACCCTGATCTCACAAAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCGACCGCGCTCCAGCCTaGGGAACCCTCCGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHPDLTKFLMTKAFTAFLDRAPA*GTLRLD Trigger: GTCCAGGCGGAGGGTTCCCCAGGCTGGAGCGCGGTC...GAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTTTGTGAGATCAGGGTGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | CGAGTGTCAAATGCTAGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAGTGTCCAGTTCCTGCTaGGAGACCTGCCCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSNASSTEEEAGALCAAVSSSC*ETCPGC Trigger: ACAGCCTGGGCAGGTCTCTCAGCAGGAACTGGACAC...TGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCTAGCATTTGACACTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCATAGCATTCCCCGCGTaGGCCCAAAAGGGCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSKPFPYPHSSACHLSVCIAFPA*AQKGTV Trigger: GACCGTGCCCTTTTGGGCCCACGCGGGGAATGCTAT...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATGACCGCGCTCCAGCCTaGGGAACCCTCCGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHDRAPA*GTLRLD Trigger: GTCCAGGCGGAGGGTTCCCCAGGCTGGAGCGCGGTC...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | TCCAACCAGCATGTGGGCGCTGCAGAGTCAGCATGGGTAACCACAGCGGGCTGTTTTTTCTGCTGTAGGTaGCTCTTTTCCAGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SNQHVGAAESAWVTTAGCFFCCR*LFSRLG Trigger: ACCGAGCCTGGAAAAGAGCCACCTACAGCAGAAAAA...ACAGCCCGCTGTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | ACTGCCTTCCTCCAACCAGCATGTGGGCGCTGCAGAGTCAGCATGGGTAACCACTCAGGGTGGCCCTTCTaGAATTCCTCCTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAFLQPACGRCRVSMGNHSGWPF*NSSFFL Trigger: CAAGAAGAAGGAGGAATTCCAGAAGGGCCACCCTGA...GTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGAGGAAGGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | CGAGTGTCAAATGCTAGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAATTCCACGTATCAGCTaGTCCAAACACAGGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVSNASSTEEEAGALCAAIPRIS*SKHRAV Trigger: GACGGCCCTGTGTTTGGATCAGCTGATACGTGGAAT...TGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCTAGCATTTGACACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCCTCGAAGGCTGCTTTTaGTTTGGTCCACACGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSKPFPYPHSSACHLSVCLEGCF*FGPHGT Trigger: GGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAG...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | CAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGACCGCGCTCCAGCCTaGGGAACCCTCCGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QQFWKDILNSVVLDPIANDRAPA*GTLRLD Trigger: GTCCAGGCGGAGGGTTCCCCAGGCTGGAGCGCGGTC...GTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCAGGCTGCTTTTGCTTTaGTCCACACGGAACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSKPFPYPHSSACHLSVCRLLLL*STRNLF Trigger: AAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCT...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATGTGTCCAGTTCCTGCTaGGAGACCTGCCCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHVSSSC*ETCPGC Trigger: ACAGCCTGGGCAGGTCTCTCAGCAGGAACTGGACAC...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGCAGTGATAATTTCCCACAGAGCAGGGTTTTGCTCAGAAGTGAGCTATTTACGGTCCCATCGCTCTaGACCAGATGCGGCCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNFPQSRVLLRSELFTVPSL*TRCGPL Trigger: TAAGGGGCCGCATCTGGTGCAGAGCGATGGGACCGT...AAATAGCTCACTTCTGAGCAAAACCCTGCTCTGTGGGAAATTATCACTGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATACGGTCCCATCGCTCTaGACCAGATGCGGCCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHTVPSL*TRCGPL Trigger: TAAGGGGCCGCATCTGGTGCAGAGCGATGGGACCGT...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | AAGCTGCTTCCACTACAGTCCCCTCTGTTTAAGAGTTTGCAAGTCATAAACTTGCCCTGGAGGTCAGGGTaGCCCTTCTGGAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLPLQSPLFKSLQVINLPWRSG*PFWNSS Trigger: GGAGGAATTCCAGAAGGGCCACCCTGACCTCCAGGG...CAAGTTTATGACTTGCAAACTCTTAAACAGAGGGGACTGTAGTGGAAGCAGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCGAAGATGTCATCCGCTaGCTGCCCCTGGAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILEGHTKQCCSGSHSKRAEDVIR*LPLEVR Trigger: CCTGACCTCCAGGGGCAGCCAGCGGATGACATCTTC...GGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | AGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAGTGAGTTTTGTGGAGTATTCGAATCTGATCTaGACTTGGAATAGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSTEEEAGALCAAVSFVEYSNLI*TWNSIP Trigger: GGGAATGCTATTCCAAGTGCAGATCAGATTCGAATA...CTCCACAAAACTCACTGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCTTGTCTAATTCTTGCTaGAAGTGCTCAAACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSKPFPYPHSSACHLSVCLSNSC*KCSNSS Trigger: AGAGGAGTTTGAGCACTTCCAGCAAGAATTAGACAA...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR TCA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATATTCCACGTATCAGCTaGTCCAAACACAGGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHIPRIS*SKHRAV Trigger: GACGGCCCTGTGTTTGGATCAGCTGATACGTGGAAT...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | AAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCTTCTTGTCTAATTCTTaGTGGAAGTGCTCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KFLMTKAFTAFLQPACGRFLSNS*WKCSNS Trigger: GGAGTTTGAGCACTTCCAGCAAGAATTAGACAAGAA...GCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTCCTGCTGAGCCCGGGTaGTGGATGCCACTCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCPAEPG*WMPLTS Trigger: GCTGGTGAGTGGCATCCAGCACCCGGGCTCAGCAGG...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | GTGCCTTCAATACATGATAAAATACTGGTTATTGTCTGTGACTTCACGGTGAAGCCCTGGAGGTCAGGGTaGCCCTTCTGGAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSIHDKILVIVCDFTVKPWRSG*PFWNSS Trigger: GGAGGAATTCCAGAAGGGCCACCCTGACCTCCAGGG...CTTCACCGTGAAGTCACAGACAATAACCAGTATTTTATCATGTATTGAAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | TCCCACCCTGATCTCACAAAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCGTAATACGTAATCTTTaGCCGGACAGGATAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SHPDLTKFLMTKAFTAFLVIRNL*PDRIGF Trigger: AAACCCTATCCTGTCCGGGCAAAGATTACGTATTAC...GAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTTTGTGAGATCAGGGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGATGTCATCCGCTGGCTaGCCCTGGAGGTCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TYKGLQQFWKDILNSVVLMSSAG*PWRSGW Trigger: CCACCCTGACCTCCAGGGGCAGCCAGCGGATGACAT...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCCGAGAGCAGCAGGTGAGCAACCCTTATTCAAGTCTTTCCCATTTTCCTCACACGGAACCTCTTTaGCTTTTTAATGACGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ILREQQVSNPYSSLSHFPHTEPL*LFNDGA Trigger: AGCGCCGTCATTAAAAAGCCAAAGAGGTTCCGTGTG...AGGAAAATGGGAAAGACTTGAATAAGGGTTGCTCACCTGCTGCTCTCGGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCCGAGAGCAGCAGGTGAGCAACCCTTATTCAAGTCTTTCCCATTTTCCTCCAGGCTCGGTCAGTTaGAAAGTCAGGAAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILREQQVSNPYSSLSHFPPGSVS*KVRKER Trigger: TCTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGG...AGGAAAATGGGAAAGACTTGAATAAGGGTTGCTCACCTGCTGCTCTCGGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATTCAGGGTGGCCCTTCTaGAATTCCTCCTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHSGWPF*NSSFFL Trigger: CAAGAAGAAGGAGGAATTCCAGAAGGGCCACCCTGA...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACAGAAGATGTCATCCGCTaGCTGCCCCTGGAGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QMTLERKLTKAYNNFGRTEDVIR*LPLEVR Trigger: CCTGACCTCCAGGGGCAGCCAGCGGATGACATCTTC...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR TCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTGTGTCCAGTTCCTGCTaGGAGACCTGCCCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCVSSSC*ETCPGC Trigger: ACAGCCTGGGCAGGTCTCTCAGCAGGAACTGGACAC...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | GTTGTTCTGGATCCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGTCGCTCTGCACCAGATaGGGCCCCTTAAAGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VVLDPIANEPITLVRGKLSLCTR*GPLKLY Trigger: ATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGA...CAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGGATCCAGAACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATAGAATCATATCCAGCTaGCGGTTCAGCTGCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHRIISS*RFSCLI Trigger: GATCAAGCAGCTGAACCGGCAGCTGGATATGATTCT...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | CACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAAATAGCATTCCCCGCGTaGGCCCAAAAGGGCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HLRGNLQRLTTILEGHTKIAFPA*AQKGTV Trigger: GACCGTGCCCTTTTGGGCCCACGCGGGGAATGCTAT...TTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTATAGCATTCCCCGCGTaGGCCCAAAAGGGCACGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GNLQRLTTILEGHTKQCCIAFPA*AQKGTV Trigger: GACCGTGCCCTTTTGGGCCCACGCGGGGAATGCTAT...ACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAGTGATAATTTCCCACAGAGCAGGGTTTTGCTCAGAAGTGAGCTATTTAGGCTGCTTTTGCTTTaGTCCACACGGAACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNFPQSRVLLRSELFRLLLL*STRNLF Trigger: AAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCT...AAATAGCTCACTTCTGAGCAAAACCCTGCTCTGTGGGAAATTATCACTGCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | AAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCCCATGTTTTCCACTTTaGCACAGAATTCATAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KFLMTKAFTAFLQPACGRPCFPL*HRIHNH Trigger: ATGATTATGAATTCTGTGCCAAAGTGGAAAACATGG...GCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTCCCTGGAGGTCAGGGTaGCCCTTCTGGAATTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCPWRSG*PFWNSS Trigger: GGAGGAATTCCAGAAGGGCCACCCTGACCTCCAGGG...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | GTGCCTTCAATACATGATAAAATACTGGTTATTGTCTGTGACTTCACGGTGAAGCTCGAAGGCTGCTTTTaGTTTGGTCCACACGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VPSIHDKILVIVCDFTVKLEGCF*FGPHGT Trigger: GGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAG...CTTCACCGTGAAGTCACAGACAATAACCAGTATTTTATCATGTATTGAAGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACAATGTAAGTGTTCTCATAAAGTCTTCTATAGATTTCAGGTTGTCAGACTCGCTCCCGGTGAATTaGCTGAAAGACAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CHNVSVLIKSSIDFRLSDSLPVN*LKDSSR Trigger: CCTGCTGCTGTCTTTCAGCCAATTCACCGGGAGCGA...GTCTGACAACCTGAAATCTATAGAAGACTTTATGAGAACACTTACATTGTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCTTTTTCTGCTGTAGGTaGCTCTTTTCCAGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILEGHTKQCCSGSHSKRAFFCCR*LFSRLG Trigger: ACCGAGCCTGGAAAAGAGCCACCTACAGCAGAAAAA...GGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | GTTGTTCTGGATCCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGGGCGCTATTCGAATCTaGTCTGCACTTGGAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VVLDPIANEPITLVRGKLGAIRI*SALGIA Trigger: TGCTATTCCAAGTGCAGATCAGATTCGAATAGCGCC...CAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGGATCCAGAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATCGCTCTGCACCAGATaGGGCCCCTTAAAGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QMTLERKLTKAYNNFGRTSLCTR*GPLKLY Trigger: ATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGA...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTCTGGATCCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGAGAATCATATCCAGCTaGCGGTTCAGCTGCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VVLDPIANEPITLVRGKLRIISS*RFSCLI Trigger: GATCAAGCAGCTGAACCGGCAGCTGGATATGATTCT...CAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGGATCCAGAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGTCGCTCCCGGTGAATTaGCTGAAAGACAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TYKGLQQFWKDILNSVVLSLPVN*LKDSSR Trigger: CCTGCTGCTGTCTTTCAGCCAATTCACCGGGAGCGA...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACACTCAGAATCTCCTGCTaGCTCTTCACAACGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QMTLERKLTKAYNNFGRTLRISC*LFTTVS Trigger: GGACACCGTTGTGAAGAGCCAGCAGGAGATTCTGAG...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | CAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGGCGCTATTCGAATCTaGTCTGCACTTGGAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQFWKDILNSVVLDPIANGAIRI*SALGIA Trigger: TGCTATTCCAAGTGCAGATCAGATTCGAATAGCGCC...GTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACAGCCGGTTCAGCTGCTTaGTCTCCAGATGAATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: QMTLERKLTKAYNNFGRTAGSAA*SPDEYD Trigger: ATCGTATTCATCTGGAGATCAAGCAGCTGAACCGGC...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | GGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCGCTCTGCACCAGATaGGGCCCCTTAAAGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GNLQRLTTILEGHTKQCCSLCTR*GPLKLY Trigger: ATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGA...ACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATTATTCGAATCTGATCTaGACTTGGAATAGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHYSNLI*TWNSIP Trigger: GGGAATGCTATTCCAAGTGCAGATCAGATTCGAATA...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGCTCGAAGGCTGCTTTTaGTTTGGTCCACACGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: TYKGLQQFWKDILNSVVLLEGCF*FGPHGT Trigger: GGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAG...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | CAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACAGGCTGCTTTTGCTTTaGTCCACACGGAACCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQFWKDILNSVVLDPIANRLLLL*STRNLF Trigger: AAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCT...GTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | CAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACCCAGGCTCGGTCAGTTaGAAAGTCAGGAAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQFWKDILNSVVLDPIANPGSVS*KVRKER Trigger: TCTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGG...GTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTCTCAGAATCTCCTGCTaGCTCTTCACAACGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCLRISC*LFTTVS Trigger: GGACACCGTTGTGAAGAGCCAGCAGGAGATTCTGAG...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACAGGCGCTATTCGAATCTaGTCTGCACTTGGAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QMTLERKLTKAYNNFGRTGAIRI*SALGIA Trigger: TGCTATTCCAAGTGCAGATCAGATTCGAATAGCGCC...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTGCCGGTTCAGCTGCTTaGTCTCCAGATGAATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCAGSAA*SPDEYD Trigger: ATCGTATTCATCTGGAGATCAAGCAGCTGAACCGGC...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR TCA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGCCGGTTCAGCTGCTTaGTCTCCAGATGAATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: TYKGLQQFWKDILNSVVLAGSAA*SPDEYD Trigger: ATCGTATTCATCTGGAGATCAAGCAGCTGAACCGGC...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTCTGGATCCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGGTAATACGTAATCTTTaGCCGGACAGGATAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VVLDPIANEPITLVRGKLVIRNL*PDRIGF Trigger: AAACCCTATCCTGTCCGGGCAAAGATTACGTATTAC...CAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGGATCCAGAACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR GCA 90 bp | GGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTAGAATCATATCCAGCTaGCGGTTCAGCTGCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GNLQRLTTILEGHTKQCCRIISS*RFSCLI Trigger: GATCAAGCAGCTGAACCGGCAGCTGGATATGATTCT...ACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGCACACGGAACCTCTTTaGCTTTTTAATGACGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYKGLQQFWKDILNSVVLHTEPL*LFNDGA Trigger: AGCGCCGTCATTAAAAAGCCAAAGAGGTTCCGTGTG...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACACACGGAACCTCTTTaGCTTTTTAATGACGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLRGNLQRLTTILEGHTKHTEPL*LFNDGA Trigger: AGCGCCGTCATTAAAAAGCCAAAGAGGTTCCGTGTG...TTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCAGTGATAATTTCCCACAGAGCAGGGTTTTGCTCAGAAGTGAGCTATTTCCATGTTTTCCACTTTaGCACAGAATTCATAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGSDNFPQSRVLLRSELFPCFPL*HRIHNH Trigger: ATGATTATGAATTCTGTGCCAAAGTGGAAAACATGG...AAATAGCTCACTTCTGAGCAAAACCCTGCTCTGTGGGAAATTATCACTGCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | GGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTCCAGGCTCGGTCAGTTaGAAAGTCAGGAAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GNLQRLTTILEGHTKQCCPGSVS*KVRKER Trigger: TCTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGG...ACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGTTTTTCTGCTGTAGGTaGCTCTTTTCCAGGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TYKGLQQFWKDILNSVVLFFCCR*LFSRLG Trigger: ACCGAGCCTGGAAAAGAGCCACCTACAGCAGAAAAA...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| 3UTR CAA 72 bp | TCTGTATTCTTAATAAGCATTCCAGGAACTGAATGGTaGGCCCATGGGCCATACTCTGAAAAACACTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVFLISIPGTEW*AHGPYSEKHLC Trigger: ACATAAGTGTTTTTCAGAGTATGGCCCATGGGCCAACCATTCAGTTCCTGGAATGCTTATTAAGAATACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGTAATACGTAATCTTTaGCCGGACAGGATAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TYKGLQQFWKDILNSVVLVIRNL*PDRIGF Trigger: AAACCCTATCCTGTCCGGGCAAAGATTACGTATTAC...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTATTCGAATCTGATCTaGACTTGGAATAGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCYSNLI*TWNSIP Trigger: GGGAATGCTATTCCAAGTGCAGATCAGATTCGAATA...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | GGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTTCTTGTCTAATTCTTaGTGGAAGTGCTCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNLQRLTTILEGHTKQCCFLSNS*WKCSNS Trigger: GGAGTTTGAGCACTTCCAGCAAGAATTAGACAAGAA...ACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTTCTTGTCTAATTCTTaGTGGAAGTGCTCAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCFLSNS*WKCSNS Trigger: GGAGTTTGAGCACTTCCAGCAAGAATTAGACAAGAA...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS-3UTR CCA 90 bp | AGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTTGTCTAATTCTTGCTaGAAGTGCTCAAACTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGNLQRLTTILEGHTKQCLSNSC*KCSNSS Trigger: AGAGGAGTTTGAGCACTTCCAGCAAGAATTAGACAA...ACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACCATGTTTTCCACTTTaGCACAGAATTCATAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLRGNLQRLTTILEGHTKPCFPL*HRIHNH Trigger: ATGATTATGAATTCTGTGCCAAAGTGGAAAACATGG...TTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS CCA 90 bp | TTAAAGCTGTATTTGTACTCGAAACGGCGGTGTGGCAACTCGGCCTaGGTGCCCGCGGCGCCGGGAGCCGCAGCGTCGCCTCCCGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LKLYLYSKRRCGNSA*VPAAPGAAASPPVP Trigger: CGGCACGGGAGGCGACGCTGCGGCTCCCGGCGCCGCGGGCACCCAGGCCGAGTTGCCACACCGCCGTTTCGAGTACAAATACAGCTTTAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS CCA 90 bp | CAGATGCGGCCCCTTAAAGCTGTATTTGTACTCGAAACGGCGGTGTaGCAACTCGGCCTGGGTGCCCGCGGCGCCGGGAGCCGCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: QMRPLKAVFVLETAV*QLGLGARGAGSRSV Trigger: GACGCTGCGGCTCCCGGCGCCGCGGGCACCCAGGCCGAGTTGCCACACCGCCGTTTCGAGTACAAATACAGCTTTAAGGGGCCGCATCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 90 bp | CCCGCGTGGGCCCAAAAGGGCACGGTCCCATCGCTCTGCACCAGATaGGGCCCCTTAAAGCTGTATTTGTACTCGAAACGGCGGTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAWAQKGTVPSLCTR*GPLKLYLYSKRRCG Trigger: GCCACACCGCCGTTTCGAGTACAAATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGATGGGACCGTGCCCTTTTGGGCCCACGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS CCA 90 bp | GCTGAGAGACCTGCCCAGGCTGTCCCGGGGTTCCTGCTCCTCTCCTaGAGATCTCCTCTGTCAGGGACGAGACGTACCTCCTCTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AERPAQAVPGFLLLS*RSPLSGTRRTSSVH Trigger: ATGAACAGAGGAGGTACGTCTCGTCCCTGACAGAGGAGATCTCCAGGAGAGGAGCAGGAACCCCGGGACAGCCTGGGCAGGTCTCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 90 bp | AGTGCTGAGTTGTCTCGTAGACGCCTGCTGAGCCCGGGTGCTGGATaGCACTCACCAGCCGCACAGTTTCACTCATGGAGTTCTTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SAELSRRRLLSPGAG*HSPAAQFHSWSSSP Trigger: AGGTGAAGAACTCCATGAGTGAAACTGTGCGGCTGGTGAGTGGCATCCAGCACCCGGGCTCAGCAGGCGTCTACGAGACAACTCAGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | TCCAACCAGCATGTGGGCGCTGCAGAGTCAGCATGGGTAACCACAGCGGGCTGTTCTCGAAGGCTGCTTTaGCTTTGGTCCACACGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SNQHVGAAESAWVTTAGCSRRLL*LWSTRN Trigger: GTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGA...ACAGCCCGCTGTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS TCA 90 bp | TTCCTTGATGTCCATGAAGTGCTGAGTTGTCTCGTAGACGCCTGCTaGGCCCGGGTGCTGGATGCCACTCACCAGCCGCACAGTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FLDVHEVLSCLVDAC*ARVLDATHQPHSFT Trigger: AGTGAAACTGTGCGGCTGGTGAGTGGCATCCAGCACCCGGGCTCAGCAGGCGTCTACGAGACAACTCAGCACTTCATGGACATCAAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 90 bp | TACGATTCTGTCCTTCAAACACCTGTCTCAGCTCCCGATCGCCTATaGTCTCGAAGATGTCATCCGCTGGCTGCCCCTGGAGGTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YDSVLQTPVSAPDRL*SRRCHPLAAPGGQG Trigger: ACCCTGACCTCCAGGGGCAGCCAGCGGATGACATCTTCGAGAGCATAGGCGATCGGGAGCTGAGACAGGTGTTTGAAGGACAGAATCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 90 bp | GCAAACTTTCTCTCTGAGAAGCAAGACACTGGTCAGCAGGGGGCTTaGCCCATGCCTCCATCCCATCCCAGTTTTGGAAGGGACCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ANFLSEKQDTGQQGA*PMPPSHPSFGRDQG Trigger: TCCCTGGTCCCTTCCAAAACTGGGATGGGATGGAGGCATGGGGCAAGCCCCCTGCTGACCAGTGTCTTGCTTCTCAGAGAGAAAGTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143990.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAGTGAGTTTTGTGGAGGTCGCTCCCGGTGAATaGGCTGAAAGACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSTEEEAGALCAAVSFVEVAPGE*AERQQQ Trigger: CTGCTGCTGTCTTTCAGCCAATTCACCGGGAGCGAC...CTCCACAAAACTCACTGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCATCTGAGATGAGCAGTGGTGACCGTCAGGAAGGCAAGGGCTTTGGCAGGTCCAGGCTCGGTCAGTaGGAAAGTCAGGAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AASEMSSGDRQEGKGFGRSRLGQ*ESQERK Trigger: CTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGGA...CCTGCCAAAGCCCTTGCCTTCCTGACGGTCACCACTGCTCATCTCAGATGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | GCGGCATCTGAGATGAGCAGTGGTGACCGTCAGGAAGGCAAGGGCTTTGGCAGGCTTCACCTCATTCACTaGTCTCAGAATCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AASEMSSGDRQEGKGFGRLHLIH*SQNLLL Trigger: CAGCAGGAGATTCTGAGACAAGTGAATGAGGTGAAG...CCTGCCAAAGCCCTTGCCTTCCTGACGGTCACCACTGCTCATCTCAGATGCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | ACTGCCTTCCTCCAACCAGCATGTGGGCGCTGCAGAGTCAGCATGGGTAACCACCCCTTAAAGCTGTATTaGTACTCGAAACGGCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TAFLQPACGRCRVSMGNHPLKLY*YSKRRC Trigger: ACACCGCCGTTTCGAGTACAAATACAGCTTTAAGGG...GTGGTTACCCATGCTGACTCTGCAGCGCCCACATGCTGGTTGGAGGAAGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CGAGTGTCAAATGCTAGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCATCTCGAAGGCTGCTTTaGCTTTGGTCCACACGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RVSNASSTEEEAGALCAASRRLL*LWSTRN Trigger: GTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGA...TGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCTAGCATTTGACACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCCAACCAGCATGTGGGCGCTCCAGGCTCGGTCAGTaGGAAAGTCAGGAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KFLMTKAFTAFLQPACGRSRLGQ*ESQERK Trigger: CTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGGA...GCGCCCACATGCTGGTTGGAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGCAAACCTTTCCCCTACCCCCATTCTAGTGCTTGTCACCTGTCAGTGTGCCTTCACCTCATTCACTaGTCTCAGAATCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSKPFPYPHSSACHLSVCLHLIH*SQNLLL Trigger: CAGCAGGAGATTCTGAGACAAGTGAATGAGGTGAAG...GCACACTGACAGGTGACAAGCACTAGAATGGGGGTAGGGGAAAGGTTTGCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS TCA 90 bp | GCTTTCCAGTATGGGGGACATTTGGAGAAGAACCTTTCCCACAGCTaGTGGCGAGCCATTTCCAAAGGGCTTGGGGCAAACTTTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AFQYGGHLEKNLSHS*WRAISKGLGANFLS Trigger: AGAGAGAAAGTTTGCCCCAAGCCCTTTGGAAATGGCTCGCCATCAGCTGTGGGAAAGGTTCTTCTCCAAATGTCCCCCATACTGGAAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143990.2 |
||
| CDS CCA 90 bp | GGAATGTCACTTCCACTTCCCAGTTCTCGAAGGCTGCTTTTGCTTTaGTCCACACGGAACCTCTTTGGCTTTTTAATGACGGCGCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: GMSLPLPSSRRLLLL*STRNLFGFLMTALF Trigger: GAATAGCGCCGTCATTAAAAAGCCAAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGAACTGGGAAGTGGAAGTGACATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
||
| CDS CCA 90 bp | ATGTCTTTTTCTGCTGTAGGTGGCTCTTTTCCAGGCTCGGTCAGTTaGAAAGTCAGGAAAGAAAGAACGTCGTGGTCATCTGCAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: MSFSAVGGSFPGSVS*KVRKERTSWSSASP Trigger: GGGACTTGCAGATGACCACGACGTTCTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGGAAAAGAGCCACCTACAGCAGAAAAAGACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCGTCGCTCCCGGTGAATaGGCTGAAAGACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILEGHTKQCCSGSHSKRAVAPGE*AERQQQ Trigger: CTGCTGCTGTCTTTCAGCCAATTCACCGGGAGCGAC...GGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS TCA 90 bp | CCATTCCACGTATCAGCTGATCCAAACACAGGGCCGTCCAAGCCTTaGTTTTCTGTATACCAAATTGCTAAGCCATCGGCTCCAATTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PFHVSADPNTGPSKP*FSVYQIAKPSAPIR Trigger: TCGAATTGGAGCCGATGGCTTAGCAATTTGGTATACAGAAAATCAAGGCTTGGACGGCCCTGTGTTTGGATCAGCTGATACGTGGAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
||
| CDS CCA 90 bp | CGAACAACACTGTCTGCACCACTACAAATATCACAAAGTGGATCGTaGATAGACACGACGGGAATGGTGGTAGGTCTGGGCATTTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RTTLSAPLQISQSGS*IDTTGMVVGLGILV Trigger: AACCAAAATGCCCAGACCTACCACCATTCCCGTCGTGTCTATCCACGATCCACTTTGTGATATTTGTAGTGGTGCAGACAGTGTTGTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCACAGAGGAGGAAGCAGGAGCACTGTGTGCTGCAGTGAGTTTTGTGGAGGTGCTCAAACTCCTCTaGATACTTTTCCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSTEEEAGALCAAVSFVEVLKLL*ILFLFF Trigger: AAAGAAAAGGAAAAGTATCAAGAGGAGTTTGAGCAC...CTCCACAAAACTCACTGCAGCACACAGTGCTCCTGCTTCCTCCTCTGTGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | TCCCACCCTGATCTCACAAAGTTCCTGATGACTAAAGCGTTCACTGCCTTCCTCTATCCCAAAATGACCTaGTGTGGGGATAACCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHPDLTKFLMTKAFTAFLYPKMT*CGDNHV Trigger: AACATGGTTATCCCCACACAAGGTCATTTTGGGATA...GAGGAAGGCAGTGAACGCTTTAGTCATCAGGAACTTTGTGAGATCAGGGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS TCA 90 bp | TCCTCTGTTCATCAAGAATCATATCCAGCTGCCGGTTCAGCTGCTTaGTCTCCAGATGAATACGATTCTGTCCTTCAAACACCTGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVHQESYPAAGSAA*SPDEYDSVLQTPVS Trigger: TGAGACAGGTGTTTGAAGGACAGAATCGTATTCATCTGGAGATCAAGCAGCTGAACCGGCAGCTGGATATGATTCTTGATGAACAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | TGCCACAATGTAAGTGTTCTCATAAAGTCTTCTATAGATTTCAGGTTGTCAGACGTCGCTCCCGGTGAATaGGCTGAAAGACAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CHNVSVLIKSSIDFRLSDVAPGE*AERQQQ Trigger: CTGCTGCTGTCTTTCAGCCAATTCACCGGGAGCGAC...GTCTGACAACCTGAAATCTATAGAAGACTTTATGAGAACACTTACATTGTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048260.15 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATTTTGGCAGCTGCTTCTaGCTGAGTCCTGTACATGAT | + |
|
Preference number: 5 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHFGSCF*LSPVHD Trigger: ATCATGTACAGGACTCAGCAAGAAGCAGCTGCCAAA...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACTCTCGAAGGCTGCTTTaGCTTTGGTCCACACGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QQFWKDILNSVVLDPIANSRRLL*LWSTRN Trigger: GTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGA...GTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTTCTGGATCCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGCCCTTAAAGCTGTATTaGTACTCGAAACGGCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVLDPIANEPITLVRGKLPLKLY*YSKRRC Trigger: ACACCGCCGTTTCGAGTACAAATACAGCTTTAAGGG...CAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGGATCCAGAACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTTCTGGATCCCATAGCAAACGAGCCCATTACTTTAGTAAGAGGTAAATTGAGGGCCGTCCAAGCCTaGATTTTCTGTATACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VVLDPIANEPITLVRGKLRAVQA*IFCIPN Trigger: ATTTGGTATACAGAAAATCAAGGCTTGGACGGCCCT...CAATTTACCTCTTACTAAAGTAATGGGCTCGTTTGCTATGGGATCCAGAACAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 90 bp | ATTATTGATCATGACTGTCAGTGTCTTCTGGTAATACGTAATCTTTaGCCGGACAGGATAGGGTTTATTACGAAAGTCCCTCTGACAACT | + |
|
Preference number: 5 (lower is better) Translates to: IIDHDCQCLLVIRNL*PDRIGFITKVPLTT Trigger: AGTTGTCAGAGGGACTTTCGTAATAAACCCTATCCTGTCCGGGCAAAGATTACGTATTACCAGAAGACACTGACAGTCATGATCAATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACAGGGCCGTCCAAGCCTaGATTTTCTGTATACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QQFWKDILNSVVLDPIANRAVQA*IFCIPN Trigger: ATTTGGTATACAGAAAATCAAGGCTTGGACGGCCCT...GTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGTCCAGGCTCGGTCAGTaGGAAAGTCAGGAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TYKGLQQFWKDILNSVVLSRLGQ*ESQERK Trigger: CTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGGA...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGGACATACTAAACAGTGTTGTTCTGGATCCCATAGCAAACGAGCCCATGTGCTCAAACTCCTCTaGATACTTTTCCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LEGHTKQCCSGSHSKRAHVLKLL*ILFLFF Trigger: AAAGAAAAGGAAAAGTATCAAGAGGAGTTTGAGCAC...ATGGGCTCGTTTGCTATGGGATCCAGAACAACACTGTTTAGTATGTCCTTCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACACTTCACCTCATTCACTaGTCTCAGAATCTCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QMTLERKLTKAYNNFGRTLHLIH*SQNLLL Trigger: CAGCAGGAGATTCTGAGACAAGTGAATGAGGTGAAG...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACAAGGGCCGTCCAAGCCTaGATTTTCTGTATACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QMTLERKLTKAYNNFGRTRAVQA*IFCIPN Trigger: ATTTGGTATACAGAAAATCAAGGCTTGGACGGCCCT...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGTTTGGCAGCTGCTTCTaGCTGAGTCCTGTACATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TYKGLQQFWKDILNSVVLFGSCF*LSPVHD Trigger: ATCATGTACAGGACTCAGCAAGAAGCAGCTGCCAAA...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACAGGTGTAAAGCCATTATaGATCATGACTGTCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QMTLERKLTKAYNNFGRTGVKPL*IMTVSV Trigger: GACACTGACAGTCATGATCAATAATGGCTTTACACC...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGACACTTGAGAGGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATATCCCAAAATGACCTaGTGTGGGGATAACCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: QMTLERKLTKAYNNFGRTYPKMT*CGDNHV Trigger: AACATGGTTATCCCCACACAAGGTCATTTTGGGATA...TGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCCTCTCAAGTGTCATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | ACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTCTGGGTGTAAAGCCATTATaGATCATGACTGTCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TYKGLQQFWKDILNSVVLGVKPL*IMTVSV Trigger: GACACTGACAGTCATGATCAATAATGGCTTTACACC...CAGAACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | GGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTTATCCCAAAATGACCTaGTGTGGGGATAACCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GNLQRLTTILEGHTKQCCYPKMT*CGDNHV Trigger: AACATGGTTATCCCCACACAAGGTCATTTTGGGATA...ACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS-3UTR CAA 90 bp | GGAAACTTACAAAGGCTTACAACAATTTTGGAAGGACATACTAAACAGTGTTGTGTGCTCAAACTCCTCTaGATACTTTTCCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GNLQRLTTILEGHTKQCCVLKLL*ILFLFF Trigger: AAAGAAAAGGAAAAGTATCAAGAGGAGTTTGAGCAC...ACAACACTGTTTAGTATGTCCTTCCAAAATTGTTGTAAGCCTTTGTAAGTTTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS CCA 72 bp | TATTTGTACTCGAAACGGCGGTGTGGCAACTCGGCCTaGGTGCCCGCGGCGCCGGGAGCCGCAGCGTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: YLYSKRRCGNSA*VPAAPGAAASP Trigger: AGGCGACGCTGCGGCTCCCGGCGCCGCGGGCACCCAGGCCGAGTTGCCACACCGCCGTTTCGAGTACAAATA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS CCA 72 bp | CCCCTTAAAGCTGTATTTGTACTCGAAACGGCGGTGTaGCAACTCGGCCTGGGTGCCCGCGGCGCCGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLKAVFVLETAV*QLGLGARGAGS Trigger: GCTCCCGGCGCCGCGGGCACCCAGGCCGAGTTGCCACACCGCCGTTTCGAGTACAAATACAGCTTTAAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 72 bp | CTGCTGAGAGACCTGCCCAGGCTGTCCCGGGGTTCCTaGTCCTCTCCTGGAGATCTCCTCTGTCAGGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: LLRDLPRLSRGS*SSPGDLLCQGR Trigger: TCGTCCCTGACAGAGGAGATCTCCAGGAGAGGAGCAGGAACCCCGGGACAGCCTGGGCAGGTCTCTCAGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS CAA 90 bp | ACGGTCCCATCGCTCTGCACCAGATGCGGCCCCTTAAAGCTGTATTaGTACTCGAAACGGCGGTGTGGCAACTCGGCCTGGGTGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: TVPSLCTRCGPLKLY*YSKRRCGNSAWVPA Trigger: CGCGGGCACCCAGGCCGAGTTGCCACACCGCCGTTTCGAGTACAAATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGATGGGACCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS TCA 72 bp | TCCTGCTGGCTCTTCACAACGGTGTCCAGTTCCTGCTaGGAGACCTGCCCAGGCTGTCCCGGGGTTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCWLFTTVSSSC*ETCPGCPGVPA Trigger: AGCAGGAACCCCGGGACAGCCTGGGCAGGTCTCTCAGCAGGAACTGGACACCGTTGTGAAGAGCCAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS TCA 72 bp | GTCCATGAAGTGCTGAGTTGTCTCGTAGACGCCTGCTaGGCCCGGGTGCTGGATGCCACTCACCAGCCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VHEVLSCLVDAC*ARVLDATHQPH Trigger: GTGCGGCTGGTGAGTGGCATCCAGCACCCGGGCTCAGCAGGCGTCTACGAGACAACTCAGCACTTCATGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 72 bp | CCCGCGTGGGCCCAAAAGGGCACGGTCCCATCGCTCTaGACCAGATGCGGCCCCTTAAAGCTGTATTTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: PAWAQKGTVPSL*TRCGPLKLYLY Trigger: GTACAAATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGATGGGACCGTGCCCTTTTGGGCCCACGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 72 bp | CTCTCTGAGAAGCAAGACACTGGTCAGCAGGGGGCTTaGCCCATGCCTCCATCCCATCCCAGTTTTGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSEKQDTGQQGA*PMPPSHPSFGR Trigger: CCTTCCAAAACTGGGATGGGATGGAGGCATGGGGCAAGCCCCCTGCTGACCAGTGTCTTGCTTCTCAGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143990.2 |
||
| CDS CAA 72 bp | TCGCTCTGCACCAGATGCGGCCCCTTAAAGCTGTATTaGTACTCGAAACGGCGGTGTGGCAACTCGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLCTRCGPLKLY*YSKRRCGNSAW Trigger: CCAGGCCGAGTTGCCACACCGCCGTTTCGAGTACAAATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS GCA 72 bp | GCCCAAAAGGGCACGGTCCCATCGCTCTGCACCAGATaGGGCCCCTTAAAGCTGTATTTGTACTCGAAACGG | + |
|
Preference number: 6 (lower is better) Translates to: AQKGTVPSLCTR*GPLKLYLYSKR Trigger: CCGTTTCGAGTACAAATACAGCTTTAAGGGGCCGCATCTGGTGCAGAGCGATGGGACCGTGCCCTTTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS TCA 72 bp | AGCCATTTCCAAAGGGCTTGGGGCAAACTTTCTCTCTaGGAAGCAAGACACTGGTCAGCAGGGGGCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SHFQRAWGKLSL*EARHWSAGGLP Trigger: GGGCAAGCCCCCTGCTGACCAGTGTCTTGCTTCTCAGAGAGAAAGTTTGCCCCAAGCCCTTTGGAAATGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143990.2 |
||
| CDS TCA 72 bp | TATGGGGGACATTTGGAGAAGAACCTTTCCCACAGCTaGTGGCGAGCCATTTCCAAAGGGCTTGGGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: YGGHLEKNLSHS*WRAISKGLGAN Trigger: GTTTGCCCCAAGCCCTTTGGAAATGGCTCGCCATCAGCTGTGGGAAAGGTTCTTCTCCAAATGTCCCCCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143990.2 |
||
| CDS CAA 90 bp | CACCAGCCGCACAGTTTCACTCATGGAGTTCTTCACCTCATTCACTaGTCTCAGAATCTCCTGCTGGCTCTTCACAACGGTGTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HQPHSFTHGVLHLIH*SQNLLLALHNGVQF Trigger: GAACTGGACACCGTTGTGAAGAGCCAGCAGGAGATTCTGAGACAAGTGAATGAGGTGAAGAACTCCATGAGTGAAACTGTGCGGCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
||
| CDS TCA 72 bp | CCTCTTTGGCTTTTTAATGACGGCGCTATTCGAATCTaGTCTGCACTTGGAATAGCATTCCCCGCGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLWLFNDGAIRI*SALGIAFPAWA Trigger: GGCCCACGCGGGGAATGCTATTCCAAGTGCAGATCAGATTCGAATAGCGCCGTCATTAAAAAGCCAAAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS GCA 72 bp | TCGGAATGTCACTTCCACTTCCCAGTTCTCGAAGGCTaGTTTTGCTTTGGTCCACACGGAACCTCTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SECHFHFPVLEG*FCFGPHGTSLA Trigger: AGCCAAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGAACTGGGAAGTGGAAGTGACATTCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CCA 72 bp | TCGGTCAGTTGGAAAGTCAGGAAAGAAAGAACGTCGTaGTCATCTGCAAGTCCCCCTGTTGCCGCTGATATC | + |
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Preference number: 6 (lower is better) Translates to: SVSWKVRKERTS*SSASPPVAADI Trigger: GATATCAGCGGCAACAGGGGGACTTGCAGATGACCACGACGTTCTTTCTTTCCTGACTTTCCAACTGACCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CCA 72 bp | CTGTCTGCACCACTACAAATATCACAAAGTGGATCGTaGATAGACACGACGGGAATGGTGGTAGGTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSAPLQISQSGS*IDTTGMVVGLG Trigger: GCCCAGACCTACCACCATTCCCGTCGTGTCTATCCACGATCCACTTTGTGATATTTGTAGTGGTGCAGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS CAA 90 bp | TCACTCGGAATGTCACTTCCACTTCCCAGTTCTCGAAGGCTGCTTTaGCTTTGGTCCACACGGAACCTCTTTGGCTTTTTAATGACGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLGMSLPLPSSRRLL*LWSTRNLFGFLMTA Trigger: CGCCGTCATTAAAAAGCCAAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGAACTGGGAAGTGGAAGTGACATTCCGAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS GCA 72 bp | GCATTTTGGTTTTTCATTAGATGGCATGCTGCGCTGTaGGAGGCTGTCGATATCTCTCTTCACCACGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AFWFFIRWHAAL*EAVDISLHHVQ Trigger: CTGCACGTGGTGAAGAGAGATATCGACAGCCTCGCACAGCGCAGCATGCCATCTAATGAAAAACCAAAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS CAA 72 bp | TTCTGCTGTAGGTGGCTCTTTTCCAGGCTCGGTCAGTaGGAAAGTCAGGAAAGAAAGAACGTCGTGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: FCCRWLFSRLGQ*ESQERKNVVVI Trigger: GATGACCACGACGTTCTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGGAAAAGAGCCACCTACAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CAA 90 bp | CGGAATGTCACTTCCACTTCCCAGTTCTCGAAGGCTGCTTTTGCTTaGGTCCACACGGAACCTCTTTGGCTTTTTAATGACGGCGCTATT | + |
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Preference number: 6 (lower is better) Translates to: RNVTSTSQFSKAAFA*VHTEPLWLFNDGAI Trigger: AATAGCGCCGTCATTAAAAAGCCAAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGAACTGGGAAGTGGAAGTGACATTCCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CCA 72 bp | CTTCCACTTCCCAGTTCTCGAAGGCTGCTTTTGCTTTaGTCCACACGGAACCTCTTTGGCTTTTTAATGACG | + |
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Preference number: 6 (lower is better) Translates to: LPLPSSRRLLLL*STRNLFGFLMT Trigger: CGTCATTAAAAAGCCAAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGAACTGGGAAGTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CCA 72 bp | TTGTTGAACTTCATGCTTTCCAGTATGGGGGACATTTaGAGAAGAACCTTTCCCACAGCTGATGGCGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LLNFMLSSMGDI*RRTFPTADGEP Trigger: TGGCTCGCCATCAGCTGTGGGAAAGGTTCTTCTCCAAATGTCCCCCATACTGGAAAGCATGAAGTTCAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143990.2 |
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| CDS CAA 90 bp | AATGTCTTTTTCTGCTGTAGGTGGCTCTTTTCCAGGCTCGGTCAGTaGGAAAGTCAGGAAAGAAAGAACGTCGTGGTCATCTGCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: NVFFCCRWLFSRLGQ*ESQERKNVVVICKS Trigger: GGACTTGCAGATGACCACGACGTTCTTTCTTTCCTGACTTTCCAACTGACCGAGCCTGGAAAAGAGCCACCTACAGCAGAAAAAGACATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS TCA 72 bp | GTATCAGCTGATCCAAACACAGGGCCGTCCAAGCCTTaGTTTTCTGTATACCAAATTGCTAAGCCATCGGCT | + |
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Preference number: 6 (lower is better) Translates to: VSADPNTGPSKP*FSVYQIAKPSA Trigger: AGCCGATGGCTTAGCAATTTGGTATACAGAAAATCAAGGCTTGGACGGCCCTGTGTTTGGATCAGCTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CCA 72 bp | AACAACACTGTCTGCACCACTACAAATATCACAAAGTaGATCGTGGATAGACACGACGGGAATGGTGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: NNTVCTTTNITK*IVDRHDGNGGR Trigger: CCTACCACCATTCCCGTCGTGTCTATCCACGATCCACTTTGTGATATTTGTAGTGGTGCAGACAGTGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000236866.2 |
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| CDS CAA 72 bp | ACTTCCACTTCCCAGTTCTCGAAGGCTGCTTTTGCTTaGGTCCACACGGAACCTCTTTGGCTTTTTAATGAC | + |
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Preference number: 6 (lower is better) Translates to: TSTSQFSKAAFA*VHTEPLWLFND Trigger: GTCATTAAAAAGCCAAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGAACTGGGAAGTGGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CAA 72 bp | ATGTCACTTCCACTTCCCAGTTCTCGAAGGCTGCTTTaGCTTTGGTCCACACGGAACCTCTTTGGCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: MSLPLPSSRRLL*LWSTRNLFGFL Trigger: TAAAAAGCCAAAGAGGTTCCGTGTGGACCAAAGCAAAAGCAGCCTTCGAGAACTGGGAAGTGGAAGTGACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS GCA 72 bp | CATGACTGTCAGTGTCTTCTGGTAATACGTAATCTTTaGCCGGACAGGATAGGGTTTATTACGAAAGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HDCQCLLVIRNL*PDRIGFITKVP Trigger: AGGGACTTTCGTAATAAACCCTATCCTGTCCGGGCAAAGATTACGTATTACCAGAAGACACTGACAGTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048260.15 ENSMUST00000120461.9 ENSMUST00000143990.2 ENSMUST00000236866.2 |
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| CDS CAA 72 bp | TATTCGAATCTGATCTGCACTTGGAATAGCATCTTGTaGAACTTCATGCTTTCCAGTATGGGGGACATTTGG | + |
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Preference number: 6 (lower is better) Translates to: YSNLICTWNSIL*NFMLSSMGDIW Trigger: CCAAATGTCCCCCATACTGGAAAGCATGAAGTTCAACAAGATGCTATTCCAAGTGCAGATCAGATTCGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143990.2 |
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