Pregenerated sensors for LIX1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049288Ensembl transcript IDs: ENSMUST00000062058.5
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAGAAGCAGCTCAGGTAGTGCCACCTACCCACCCCATGTGAATTaGGTGTATCATTCTCTTGTTCCTAGGCAGTTTCTCATTGTGACC | + |
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Preference number: 1 (lower is better) Translates to: LRSSSGSATYPPHVN*VYHSLVPRQFLIVT Trigger: GGTCACAATGAGAAACTGCCTAGGAACAAGAGAATGATACACTCAATTCACATGGGGTGGGTAGGTGGCACTACCTGAGCTGCTTCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 90 bp | AGAAACCAAGAATATGGGCGGTTTTATGTGTGGGAGAGAGGGGTCTaGAACAGGATCTTACACACTGTAGCCCATGCTGACCTGGAACTT | + |
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Preference number: 1 (lower is better) Translates to: RNQEYGRFYVWERGV*NRILHTVAHADLEL Trigger: AAGTTCCAGGTCAGCATGGGCTACAGTGTGTAAGATCCTGTTTCAGACCCCTCTCTCCCACACATAAAACCGCCCATATTCTTGGTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 90 bp | GTAAGCTCAGAAGCAGCTCAGGTAGTGCCACCTACCCACCCCATGTaGATTGAGTGTATCATTCTCTTGTTCCTAGGCAGTTTCTCATTG | + |
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Preference number: 1 (lower is better) Translates to: VSSEAAQVVPPTHPM*IECIILLFLGSFSL Trigger: CAATGAGAAACTGCCTAGGAACAAGAGAATGATACACTCAATTCACATGGGGTGGGTAGGTGGCACTACCTGAGCTGCTTCTGAGCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR GCA 90 bp | GGCAGACCTGCACCACCAGACCCAGCTCCTAACCTAAAATCAAACTaGAATTGTCACATGGGAAGTCGCATTATAGTAGCATTAACTGTC | + |
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Preference number: 1 (lower is better) Translates to: GRPAPPDPAPNLKSN*NCHMGSRIIVALTV Trigger: GACAGTTAATGCTACTATAATGCGACTTCCCATGTGACAATTGCAGTTTGATTTTAGGTTAGGAGCTGGGTCTGGTGGTGCAGGTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 90 bp | TTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCTaGGTCATCACGTACCTGTGTGCTGCTGTTTCAAAAGAAAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: FTAILSQTAECREHS*VITYLCAAVSKERD Trigger: ATCTCTTTCTTTTGAAACAGCAGCACACAGGTACGTGATGACTCAGCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR CCA 90 bp | TCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGAGGAACATaGTTCTCTCTAAACAGAACAGCTACCGTTTCTAAAGAACAAGAT | + |
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Preference number: 1 (lower is better) Translates to: SPQIQSYSSVDKRGT*FSLNRTATVSKEQD Trigger: ATCTTGTTCTTTAGAAACGGTAGCTGTTCTGTTTAGAGAGAACCATGTTCCTCTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCCCCCAAATGAAGGAGCACTTAGAGGCAAGGAAGGAGGAAAGTGAGCAGTGGGAGAGAGGGGTCTaGAACAGGATCTTACACACT | + |
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Preference number: 2 (lower is better) Translates to: GSPQMKEHLEARKEESEQWERGV*NRILHT Trigger: AGTGTGTAAGATCCTGTTTCAGACCCCTCTCTCCCA...CTGCTCACTTTCCTCCTTCCTTGCCTCTAAGTGCTCCTTCATTTGGGGGCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR GCA 90 bp | AGAAGCGGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTCACGTACCTGTGTGCTaGTGTTTCAAAAGAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RSGQISEFEASLVYRVSSHVPVC*CFKRKR Trigger: TCTCTTTCTTTTGAAACAGCAGCACACAGGTACGTG...AGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCCGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCGGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTTTATGTAGTCCAGGCTaGCCTCATATTCACAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: RSGQISEFEASLVYRVSSLCSPG*PHIHSN Trigger: ATTGCTGTGAATATGAGGCCAGCCTGGACTACATAA...AGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCCGCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR CCA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCACTGATGCGGGAGGTCTaGAGCTCAGGGCCATTCTCA | + |
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Preference number: 2 (lower is better) Translates to: QFFPKLITLNPSDTKKGALMREV*SSGPFS Trigger: TGAGAATGGCCCTGAGCTCCAGACCTCCCGCATCAG...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAAAGAAGGGAAATTGAGCTTACTACATAGAATTCTCCACAAATTCAGAAAGGAAGGAGGAAAGTaGGCAGGGGAGGTGGATCGG | + |
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Preference number: 2 (lower is better) Translates to: PQKEGKLSLLHRILHKFRKEGGK*AGEVDR Trigger: CCGATCCACCTCCCCTGCTCACTTTCCTCCTTCCTT...TCTGAATTTGTGGAGAATTCTATGTAGTAAGCTCAATTTCCCTTCTTTCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR CCA 90 bp | CCTGACGCTCCCACCCTGTTTTCGTCTAGTAGAAACCAAGAATATGGGCGGTTTACTACATCCCCAAACTaGAAGTTAGAAAAGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: PDAPTLFSSSRNQEYGRFTTSPN*KLEKGS Trigger: AGATCCCTTTTCTAACTTCCAGTTTGGGGATGTAGT...AAACCGCCCATATTCTTGGTTTCTACTAGACGAAAACAGGGTGGGAGCGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR GCA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCAAATTCAGGCTTCACATaGCAGGCTGACTCTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QFFPKLITLNPSDTKKGANSGFT*QADSLP Trigger: TGGAAGAGAGTCAGCCTGGCATGTGAAGCCTGAATT...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR TCA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCACACTGTAGCCCATGCTaGCCTGGAACTTATTATGTA | + |
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Preference number: 2 (lower is better) Translates to: QFFPKLITLNPSDTKKGAHCSPC*PGTYYV Trigger: TACATAATAAGTTCCAGGTCAGCATGGGCTACAGTG...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR GCA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCAAACCTAAAATCAAACTaGAATTGTCACATGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: QFFPKLITLNPSDTKKGANLKSN*NCHMGS Trigger: ACTTCCCATGTGACAATTGCAGTTTGATTTTAGGTT...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | GCTGCGGTGGTAGTCACTGTAATCCTAGGGAGAGGCTaGTGCGGGAGGTCTGGAGCTCAGGGCCATTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: AAVVVTVILGRG*CGRSGAQGHSQ Trigger: CTGAGAATGGCCCTGAGCTCCAGACCTCCCGCATCAGCCTCTCCCTAGGATTACAGTGACTACCACCGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | GCTGCTTTTCACCTTGTTCCGACCCAGGGAGCTAACTaGTCTAACTCTGCTCCCCTCCCTCCTCTTCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: AAFHLVPTQGAN*SNSAPLPPLPA Trigger: GGCAGGAAGAGGAGGGAGGGGAGCAGAGTTAGATCAGTTAGCTCCCTGGGTCGGAACAAGGTGAAAAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR CCA 72 bp | CACTGTAATCCTAGGGAGAGGCTGATGCGGGAGGTCTaGAGCTCAGGGCCATTCTCAGCCAGAAGAAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: HCNPRERLMREV*SSGPFSARRRV Trigger: AACTCTTCTTCTGGCTGAGAATGGCCCTGAGCTCCAGACCTCCCGCATCAGCCTCTCCCTAGGATTACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | GAATATGGGCGGTTTTATGTGTGGGAGAGAGGGGTCTaGAACAGGATCTTACACACTGTAGCCCATGCTGAC | + |
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Preference number: 3 (lower is better) Translates to: EYGRFYVWERGV*NRILHTVAHAD Trigger: GTCAGCATGGGCTACAGTGTGTAAGATCCTGTTTCAGACCCCTCTCTCCCACACATAAAACCGCCCATATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | GAAGCAGCTCAGGTAGTGCCACCTACCCACCCCATGTaGATTGAGTGTATCATTCTCTTGTTCCTAGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: EAAQVVPPTHPM*IECIILLFLGS Trigger: ACTGCCTAGGAACAAGAGAATGATACACTCAATTCACATGGGGTGGGTAGGTGGCACTACCTGAGCTGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | AGCTCAGGTAGTGCCACCTACCCACCCCATGTGAATTaGGTGTATCATTCTCTTGTTCCTAGGCAGTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SSGSATYPPHVN*VYHSLVPRQFL Trigger: GAGAAACTGCCTAGGAACAAGAGAATGATACACTCAATTCACATGGGGTGGGTAGGTGGCACTACCTGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | TGGAGCTCAGGGCCATTCTCAGCCAGAAGAAGAGTTTaGGACCAGCCTGGGCTACATGAACAAATGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: WSSGPFSARRRV*DQPGLHEQMEK Trigger: TTTTTCCATTTGTTCATGTAGCCCAGGCTGGTCTCAAACTCTTCTTCTGGCTGAGAATGGCCCTGAGCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR CCA 72 bp | CCCATGCTGACCTGGAACTTATTATGTAGTCCAGGCTaGCCTCATATTCACAGCAATACTGTCTCAGACTGC | + |
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Preference number: 3 (lower is better) Translates to: PMLTWNLLCSPG*PHIHSNTVSDC Trigger: GCAGTCTGAGACAGTATTGCTGTGAATATGAGGCCAGCCTGGACTACATAATAAGTTCCAGGTCAGCATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR CAA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCAAAGCTGCTTTTCACCTaGTTCCGACCCAGGGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: QFFPKLITLNPSDTKKGAKLLFT*FRPREL Trigger: TAGCTCCCTGGGTCGGAACAAGGTGAAAAGCAGCTT...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | ATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCTaGGTCATCACGTACCTGTGTGCTGCTGTTTCAAAA | + |
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Preference number: 3 (lower is better) Translates to: ILSQTAECREHS*VITYLCAAVSK Trigger: TTTTGAAACAGCAGCACACAGGTACGTGATGACTCAGCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | CTAACTAAAGGAATCCAAGTACCCCTTTCTAAGCAGTaGCACTATTTTAACTGGACACCCTACCCTGACCCC | + |
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Preference number: 3 (lower is better) Translates to: LTKGIQVPLSKQ*HYFNWTPYPDP Trigger: GGGGTCAGGGTAGGGTGTCCAGTTAAAATAGTGTCACTGCTTAGAAAGGGGTACTTGGATTCCTTTAGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR GCA 72 bp | GCACCACCAGACCCAGCTCCTAACCTAAAATCAAACTaGAATTGTCACATGGGAAGTCGCATTATAGTAGCA | + |
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Preference number: 3 (lower is better) Translates to: APPDPAPNLKSN*NCHMGSRIIVA Trigger: TGCTACTATAATGCGACTTCCCATGTGACAATTGCAGTTTGATTTTAGGTTAGGAGCTGGGTCTGGTGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | TCGTGGCATCGAGGTTATAACTATCAATTTAAAACGTaGCACATGCCTTTAATCCCAGCACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SWHRGYNYQFKT*HMPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATTAAAGGCATGTGTCACGTTTTAAATTGATAGTTATAACCTCGATGCCACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR CAA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCACCCACCCCATGTGAATaGAGTGTATCATTCTCTTGT | + |
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Preference number: 3 (lower is better) Translates to: QFFPKLITLNPSDTKKGAPTPCE*SVSFSC Trigger: ACAAGAGAATGATACACTCAATTCACATGGGGTGGG...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | TGTATCATTCTCTTGTTCCTAGGCAGTTTCTCATTGTaGCCCATGCCTATGATTTCAGCAGGATACAACCAC | + |
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Preference number: 3 (lower is better) Translates to: CIILLFLGSFSL*PMPMISAGYNH Trigger: GTGGTTGTATCCTGCTGAAATCATAGGCATGGGTCACAATGAGAAACTGCCTAGGAACAAGAGAATGATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR-3UTR CAA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCAGAGTGTATCATTCTCTaGTTCCTAGGCAGTTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: QFFPKLITLNPSDTKKGAECIIL*FLGSFS Trigger: TGAGAAACTGCCTAGGAACAAGAGAATGATACACTC...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR CCA 72 bp | ATTCAGAGTTACAGCTCAGTGGACAAGAGAGGAACATaGTTCTCTCTAAACAGAACAGCTACCGTTTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: IQSYSSVDKRGT*FSLNRTATVSK Trigger: TTTAGAAACGGTAGCTGTTCTGTTTAGAGAGAACCATGTTCCTCTCTTGTCCACTGAGCTGTAACTCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| 3UTR TCA 72 bp | ATACAATGTAGCAGAGACCACAGAAAGAAGGGAAATTaGGCTTACTACATAGAATTCTCCACAAATTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: IQCSRDHRKKGN*AYYIEFSTNSE Trigger: CTCTGAATTTGTGGAGAATTCTATGTAGTAAGCTCAATTTCCCTTCTTTCTGTGGTCTCTGCTACATTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR GCA 90 bp | GGCCTCATATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCGCCCCTGGCACACTCTaGTCCCGGCTCACCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: GLIFTAILSQTAECREHSAPGTL*SRLTQS Trigger: GGACTGGGTGAGCCGGGAGCAGAGTGTGCCAGGGGC...GCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATATGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | CCTGACGCTCCCACCCTGTTTTCGTCTAGTAGAAACCAAGAATATGGGCGGTTTAGCCCTGCGTGTGCTTaGCGAAGCTCCTCACCACCG | + |
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Preference number: 4 (lower is better) Translates to: PDAPTLFSSSRNQEYGRFSPACA*RSSSPP Trigger: CGGTGGTGAGGAGCTTCGCCAAGCACACGCAGGGCT...AAACCGCCCATATTCTTGGTTTCTACTAGACGAAAACAGGGTGGGAGCGTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCAGGCCCCGGTCACCCCTaGCCGCAGCGCTCGCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: QFFPKLITLNPSDTKKGAGPGHP*PQRSQS Trigger: ACTTTGCGAGCGCTGCGGCCAGGGGTGACCGGGGCC...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR TCA 90 bp | AGAAGCGGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTCCTCTCTGTTACCATTaGAAGATGCCAGGGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: RSGQISEFEASLVYRVSSPLCYH*KMPGPL Trigger: CAGAGGCCCTGGCATCTTTCAATGGTAACAGAGAGG...AGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCCGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR TCA 90 bp | AGAAGCGGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTATCCAGGGCCCGATGTaGATAATGAGCCAACACCTC | + |
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Preference number: 4 (lower is better) Translates to: RSGQISEFEASLVYRVSSIQGPM*IMSQHL Trigger: GAGGTGTTGGCTCATTATTCACATCGGGCCCTGGAT...AGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCCGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | CCTGACGCTCCCACCCTGTTTTCGTCTAGTAGAAACCAAGAATATGGGCGGTTTCGTAGGGAGGGCTGTTaGAGGGGACCATCTCGTACA | + |
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Preference number: 4 (lower is better) Translates to: PDAPTLFSSSRNQEYGRFRREGC*RGPSRT Trigger: TGTACGAGATGGTCCCCTCCAACAGCCCTCCCTACG...AAACCGCCCATATTCTTGGTTTCTACTAGACGAAAACAGGGTGGGAGCGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | AGAAGCGGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTTCTTTCTTCTCCTTGTaGAAGCGCAGCTCCTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: RSGQISEFEASLVYRVSSSFFSL*KRSSLP Trigger: GGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGA...AGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCCGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR TCA 90 bp | AGAAGCGGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTGCCCAGCAGCCAGCATaGGAATATCTTTCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RSGQISEFEASLVYRVSSAQQPA*EYLSSP Trigger: AGGAGAAGAAAGATATTCTCATGCTGGCTGCTGGGC...AGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCCGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR TCA 90 bp | GGAAGCCCCCAAATGAAGGAGCACTTAGAGGCAAGGAAGGAGGAAAGTGAGCAGCTGGAACTCCAGCATTaGCTTGCCCTTGTTAGATTC | + |
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Preference number: 4 (lower is better) Translates to: GSPQMKEHLEARKEESEQLELQH*LALVRF Trigger: GAATCTAACAAGGGCAAGTCAATGCTGGAGTTCCAG...CTGCTCACTTTCCTCCTTCCTTGCCTCTAAGTGCTCCTTCATTTGGGGGCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR GCA 90 bp | GCTTACTACATAGAATTCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGGGAAGCGCAGCTCCTTaGCCGCCAGCCGGGCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: AYYIEFSTNSELQLSGQEGSAAP*PPAGLH Trigger: ATGAAGCCCGGCTGGCGGGCAAGGAGCTGCGCTTCC...CTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGAATTCTATGTAGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR GCA 90 bp | GGCCTCATATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCTGCATATTGCCCAACTaGCCAGCAGCCAGCATGAGA | + |
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Preference number: 4 (lower is better) Translates to: GLIFTAILSQTAECREHSCILPN*PAASMR Trigger: TCTCATGCTGGCTGCTGGGCAGTTGGGCAATATGCA...GCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATATGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR GCA 90 bp | GGCCTCATATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCTGGAAGAATGCATATTaGCCAACTGCCCAGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GLIFTAILSQTAECREHSWKNAY*PTAQQP Trigger: TGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCA...GCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATATGAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | GGCCTCATATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCGGGCCTCAGCTTTTGTaGGACAAAACTGGAAACTCC | + |
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Preference number: 4 (lower is better) Translates to: GLIFTAILSQTAECREHSGPQLL*DKTGNS Trigger: GGAGTTTCCAGTTTTGTCCCACAAAAGCTGAGGCCC...GCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATATGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR TCA 90 bp | GGCCTCATATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCAGATGCCAGGGCCTCTaGGACACTCTTCTCAATAAA | + |
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Preference number: 4 (lower is better) Translates to: GLIFTAILSQTAECREHSRCQGL*DTLLNK Trigger: TTTATTGAGAAGAGTGTCTCAGAGGCCCTGGCATCT...GCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATATGAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | GGCCTCATATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCTCCAAAGCCATTTGGTaGCGAATATCATCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GLIFTAILSQTAECREHSSKAIW*RISSSR Trigger: CCTGGATGATGATATTCGCCACCAAATGGCTTTGGA...GCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATATGAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | TATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCTGAGTCATTTGTGGGACAAAACTaGAAACTCCCGAAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: YSQQYCLRLLSAESIAESFVGQN*KLPKQL Trigger: GAGCTGCTTCGGGAGTTTCCAGTTTTGTCCCACAAA...TGACTCAGCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | GCTTACTACATAGAATTCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGCGAGTTCCCGTTCAGTaGAAGCCAGCTCTCTTGACA | + |
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Preference number: 4 (lower is better) Translates to: AYYIEFSTNSELQLSGQERVPVQ*KPALLT Trigger: TGTCAAGAGAGCTGGCTTCCACTGAACGGGAACTCG...CTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGAATTCTATGTAGTAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCAACCAATCCCCGTATTTaGGTTGTCAGCTTCCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: QFFPKLITLNPSDTKKGATNPRI*VVSFLS Trigger: AGAGAGGAAGCTGACAACCCAAATACGGGGATTGGT...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR TCA 90 bp | CCACAGAAAGAAGGGAAATTGAGCTTACTACATAGAATTCTCCACAAATTCAGAATCTGCCAGAATTCCTaGAGGGCCTCCACCACATTC | + |
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Preference number: 4 (lower is better) Translates to: PQKEGKLSLLHRILHKFRICQNS*RASTTF Trigger: GAATGTGGTGGAGGCCCTTCAGGAATTCTGGCAGAT...TCTGAATTTGTGGAGAATTCTATGTAGTAAGCTCAATTTCCCTTCTTTCTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | GCTTACTACATAGAATTCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGCAGTCCAAAGCCATTTaGTGGCGAATATCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: AYYIEFSTNSELQLSGQEQSKAI*WRISSS Trigger: GGATGATGATATTCGCCACCAAATGGCTTTGGACTG...CTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGAATTCTATGTAGTAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR GCA 90 bp | GCTTACTACATAGAATTCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGATTCTTCGGGATGGATaGTCATTAAACACAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AYYIEFSTNSELQLSGQEILRDG*SLNTEF Trigger: GAACTCTGTGTTTAATGAGCATCCATCCCGAAGAAT...CTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGAATTCTATGTAGTAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CCA 90 bp | GCTTACTACATAGAATTCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGAGTAATTCTTCGGGATaGATGCTCATTAAACACAGA | + |
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Preference number: 4 (lower is better) Translates to: AYYIEFSTNSELQLSGQESNSSG*MLIKHR Trigger: TCTGTGTTTAATGAGCATCCATCCCGAAGAATTACT...CTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGAATTCTATGTAGTAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CCA 90 bp | GCAGCTCCTTGCCCGCCAGCCGGGCTTCATCGAGTTCCCGTTCAGTaGAAGCCAGCTCTCTTGACAGTGCCCCTGGCACACTCTGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: AAPCPPAGLHRVPVQ*KPALLTVPLAHSAP Trigger: GGGAGCAGAGTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTCCACTGAACGGGAACTCGATGAAGCCCGGCTGGCGGGCAAGGAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS TCA 90 bp | CAGCCGGGCTTCATCGAGTTCCCGTTCAGTGGAAGCCAGCTCTCTTaGCAGTGCCCCTGGCACACTCTGCTCCCGGCTCACCCAGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QPGFIEFPFSGSQLS*QCPWHTLLPAHPVQ Trigger: TTGGACTGGGTGAGCCGGGAGCAGAGTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTCCACTGAACGGGAACTCGATGAAGCCCGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | AGAAGCGGGCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCTTGGAAGCGCAGCTCCTaGCCCGCCAGCCGGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RSGQISEFEASLVYRVSSWKRSS*PASRAS Trigger: TGAAGCCCGGCTGGCGGGCAAGGAGCTGCGCTTCCA...AGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCCGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS GCA 90 bp | CGTTCAGTGGAAGCCAGCTCTCTTGACAGTGCCCCTGGCACACTCTaGTCCCGGCTCACCCAGTCCAAAGCCATTTGGTGGCGAATATCA | + |
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Preference number: 5 (lower is better) Translates to: RSVEASSLDSAPGTL*SRLTQSKAIWWRIS Trigger: TGATATTCGCCACCAAATGGCTTTGGACTGGGTGAGCCGGGAGCAGAGTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTCCACTGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS TCA 90 bp | AGCAGCTGGAAGAATGCATATTGCCCAACTGCCCAGCAGCCAGCATaGGAATATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTTGCCCG | + |
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Preference number: 5 (lower is better) Translates to: SSWKNAYCPTAQQPA*EYLSSPCGSAAPCP Trigger: CGGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTCATGCTGGCTGCTGGGCAGTTGGGCAATATGCATTCTTCCAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | TATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCTGAGTCATGGAAGCCAGCTCTCTaGACAGTGCCCCTGGCACAC | + |
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Preference number: 5 (lower is better) Translates to: YSQQYCLRLLSAESIAESWKPAL*TVPLAH Trigger: GTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTCCA...TGACTCAGCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | GGCCTCATATTCACAGCAATACTGTCTCAGACTGCTGAGTGCAGAGAGCATAGCATATCTTTCTTCTCCTaGTGGAAGCGCAGCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: GLIFTAILSQTAECREHSISFFS*WKRSSL Trigger: CAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATAT...GCTATGCTCTCTGCACTCAGCAGTCTGAGACAGTATTGCTGTGAATATGAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | CAATTCTTCCCCAAACTGATAACCCTTAACCCATCTGACACAAAGAAAGGAGCAGCCGGGCCTCAGCTTTaGTGGGACAAAACTGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: QFFPKLITLNPSDTKKGAAGPQL*WDKTGN Trigger: GTTTCCAGTTTTGTCCCACAAAAGCTGAGGCCCGGC...TGCTCCTTTCTTTGTGTCAGATGGGTTAAGGGTTATCAGTTTGGGGAAGAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | GGAAGCCCCCAAATGAAGGAGCACTTAGAGGCAAGGAAGGAGGAAAGTGAGCAGAGCATTGACTTGCCCTaGTTAGATTCCAACATGAAT | + |
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Preference number: 5 (lower is better) Translates to: GSPQMKEHLEARKEESEQSIDLP*LDSNMN Trigger: ATTCATGTTGGAATCTAACAAGGGCAAGTCAATGCT...CTGCTCACTTTCCTCCTTCCTTGCCTCTAAGTGCTCCTTCATTTGGGGGCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | GCTTACTACATAGAATTCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGCACCAATCCCCGTATTaGGGTTGTCAGCTTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: AYYIEFSTNSELQLSGQEHQSPY*GCQLPL Trigger: GAGAGGAAGCTGACAACCCAAATACGGGGATTGGTG...CTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGAATTCTATGTAGTAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | GCTTACTACATAGAATTCTCCACAAATTCAGAGTTACAGCTCAGTGGACAAGAGCCAGTCCAAAGCCATTaGGTGGCGAATATCATCATC | + |
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Preference number: 5 (lower is better) Translates to: AYYIEFSTNSELQLSGQEPVQSH*VANIII Trigger: GATGATGATATTCGCCACCAAATGGCTTTGGACTGG...CTCTTGTCCACTGAGCTGTAACTCTGAATTTGTGGAGAATTCTATGTAGTAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS-3UTR CAA 90 bp | CCACAGAAAGAAGGGAAATTGAGCTTACTACATAGAATTCTCCACAAATTCAGATCCTCTCTGTTACCATaGAAAGATGCCAGGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PQKEGKLSLLHRILHKFRSSLLP*KDARAS Trigger: AGAGGCCCTGGCATCTTTCAATGGTAACAGAGAGGA...TCTGAATTTGTGGAGAATTCTATGTAGTAAGCTCAATTTCCCTTCTTTCTGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS GCA 90 bp | GAGACACTCTTCTCAATAAACTCATCAGTAATTCTTCGGGATGGATaGTCATTAAACACAGAGTTCATTAATGCAATCTTTGCAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: ETLFSINSSVILRDG*SLNTEFINAIFAAL Trigger: AAGTGCTGCAAAGATTGCATTAATGAACTCTGTGTTTAATGAGCATCCATCCCGAAGAATTACTGATGAGTTTATTGAGAAGAGTGTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS GCA 72 bp | GGGCCCCGGTCACCCCTGGCCGCAGCGCTCGCAAAGTaGCTCTCCCACCGACGCCTACACCGGGCTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: GPRSPLAAALAK*LSHRRLHRAAA Trigger: GGCTGCAGCCCGGTGTAGGCGTCGGTGGGAGAGGCACTTTGCGAGCGCTGCGGCCAGGGGTGACCGGGGCCC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CCA 72 bp | TGCCCGCCAGCCGGGCTTCATCGAGTTCCCGTTCAGTaGAAGCCAGCTCTCTTGACAGTGCCCCTGGCACAC | + |
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Preference number: 6 (lower is better) Translates to: CPPAGLHRVPVQ*KPALLTVPLAH Trigger: GTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTCCACTGAACGGGAACTCGATGAAGCCCGGCTGGCGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CAA 90 bp | CCAGCCGGGCTTCATCGAGTTCCCGTTCAGTGGAAGCCAGCTCTCTaGACAGTGCCCCTGGCACACTCTGCTCCCGGCTCACCCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PAGLHRVPVQWKPAL*TVPLAHSAPGSPSP Trigger: TGGACTGGGTGAGCCGGGAGCAGAGTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTCCACTGAACGGGAACTCGATGAAGCCCGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS GCA 72 bp | GAAGCCAGCTCTCTTGACAGTGCCCCTGGCACACTCTaGTCCCGGCTCACCCAGTCCAAAGCCATTTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: EASSLDSAPGTL*SRLTQSKAIWW Trigger: CCACCAAATGGCTTTGGACTGGGTGAGCCGGGAGCAGAGTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CAA 72 bp | CTTCATCGAGTTCCCGTTCAGTGGAAGCCAGCTCTCTaGACAGTGCCCCTGGCACACTCTGCTCCCGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LHRVPVQWKPAL*TVPLAHSAPGS Trigger: TGAGCCGGGAGCAGAGTGTGCCAGGGGCACTGTCAAGAGAGCTGGCTTCCACTGAACGGGAACTCGATGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CAA 72 bp | TGCCCAGCAGCCAGCATGAGAATATCTTTCTTCTCCTaGTGGAAGCGCAGCTCCTTGCCCGCCAGCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: CPAASMRISFFS*WKRSSLPASRA Trigger: AGCCCGGCTGGCGGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTCATGCTGGCTGCTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CAA 90 bp | GCCAGCATGAGAATATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTaGCCCGCCAGCCGGGCTTCATCGAGTTCCCGTTCAGTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASMRISFFSLWKRSS*PASRASSSSRSVEA Trigger: GGCTTCCACTGAACGGGAACTCGATGAAGCCCGGCTGGCGGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTCATGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS GCA 72 bp | GAATATCTTTCTTCTCCTTGTGGAAGCGCAGCTCCTTaGCCGCCAGCCGGGCTTCATCGAGTTCCCGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: EYLSSPCGSAAP*PPAGLHRVPVQ Trigger: CTGAACGGGAACTCGATGAAGCCCGGCTGGCGGGCAAGGAGCTGCGCTTCCACAAGGAGAAGAAAGATATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CCA 72 bp | CAATCTTTGCAGCACTTCGCCGGGCCTCAGCTTTTGTaGGACAAAACTGGAAACTCCCGAAGCAGCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: QSLQHFAGPQLL*DKTGNSRSSSP Trigger: GGGGGAGCTGCTTCGGGAGTTTCCAGTTTTGTCCCACAAAAGCTGAGGCCCGGCGAAGTGCTGCAAAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CCA 72 bp | ACACTCTGCTCCCGGCTCACCCAGTCCAAAGCCATTTaGTGGCGAATATCATCATCCAGGGCCCGATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: TLCSRLTQSKAI*WRISSSRARCE Trigger: TTCACATCGGGCCCTGGATGATGATATTCGCCACCAAATGGCTTTGGACTGGGTGAGCCGGGAGCAGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CAA 72 bp | ATGCAATCTTTGCAGCACTTCGCCGGGCCTCAGCTTTaGTGGGACAAAACTGGAAACTCCCGAAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: MQSLQHFAGPQL*WDKTGNSRSSS Trigger: GGAGCTGCTTCGGGAGTTTCCAGTTTTGTCCCACAAAAGCTGAGGCCCGGCGAAGTGCTGCAAAGATTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS TCA 72 bp | CATTTGGTGGCGAATATCATCATCCAGGGCCCGATGTaGATAATGAGCCAACACCTCCTGTCGAGAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: HLVANIIIQGPM*IMSQHLLSRAL Trigger: CAGTGCTCTCGACAGGAGGTGTTGGCTCATTATTCACATCGGGCCCTGGATGATGATATTCGCCACCAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS TCA 72 bp | AAGAATGCATATTGCCCAACTGCCCAGCAGCCAGCATaGGAATATCTTTCTTCTCCTTGTGGAAGCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KNAYCPTAQQPA*EYLSSPCGSAA Trigger: AGCTGCGCTTCCACAAGGAGAAGAAAGATATTCTCATGCTGGCTGCTGGGCAGTTGGGCAATATGCATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS CCA 72 bp | TTCCAACATGAATCGGAAGGCACCAATCCCCGTATTTaGGTTGTCAGCTTCCTCTCTGTTACCATTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: FQHESEGTNPRI*VVSFLSVTIER Trigger: TCTTTCAATGGTAACAGAGAGGAAGCTGACAACCCAAATACGGGGATTGGTGCCTTCCGATTCATGTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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| CDS TCA 72 bp | TTCCTCTCTGTTACCATTGAAAGATGCCAGGGCCTCTaGGACACTCTTCTCAATAAACTCATCAGTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: FLSVTIERCQGL*DTLLNKLISNS Trigger: AGAATTACTGATGAGTTTATTGAGAAGAGTGTCTCAGAGGCCCTGGCATCTTTCAATGGTAACAGAGAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062058.5 |
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