Pregenerated sensors for LIX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047786Ensembl transcript IDs: ENSMUST00000115576.3, ENSMUST00000140134.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAGGTTCCTCTGTGCCAGTGTTACAGACATGTGTGATACTCGGTTaGCACAATGCCCTGGCTGAAGTTGATTTGCTATTAGATAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: LGSSVPVLQTCVILG*HNALAEVDLLLDRA Trigger: GGCCCTATCTAATAGCAAATCAACTTCAGCCAGGGCATTGTGCCAACCGAGTATCACACATGTCTGTAACACTGGCACAGAGGAACCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR TCA 90 bp | ATCATGATCCTTTCCCTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGGTAGATTCCTGATGTaGACGTCCTCAGGAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: IMILSLVLAAVFSKTALLGRFLM*TSSGNL Trigger: CAGGTTTCCTGAGGACGTTCACATCAGGAATCTACC...CAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAGGGAAAGGATCATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTGTCTTGTCCCTCTCTTAGGTTCCTCTGTGCCAGTGTTACAGACATGTGTAGTTCAAGGCCAGCCTaGTCTAAAGACAAGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: CLSCPSLRFLCASVTDMCSSRPA*SKDKFQ Trigger: CTGGAACTTGTCTTTAGATCAGGCTGGCCTTGAACT...ACACATGTCTGTAACACTGGCACAGAGGAACCTAAGAGAGGGACAAGACAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCCATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTAGTTCAAGGCCAGCCTaGTCTAAAGACAAGTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GSIFLETPLFLSLSTVQCSSRPA*SKDKFQ Trigger: CTGGAACTTGTCTTTAGATCAGGCTGGCCTTGAACT...ACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATGGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGAAAGAGAGGAGAAGCTTaGCCCACGCAAGCACTGTTC | + |
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Preference number: 2 (lower is better) Translates to: HLLRDSFILVPFYSAVLRKRGEA*PTQALF Trigger: GAACAGTGCTTGCGTGGGTCAAGCTTCTCCTCTCTT...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGACTGTTGTGTGAAGGAATCCCTAAGGGAATaGTTGAAAACATACATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LVLAAVFSKTALLDCCVKESLRE*LKTYMK Trigger: CTTCATGTATGTTTTCAACCATTCCCTTAGGGATTC...CTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGATGTGTGATACTCGGTTaGCACAATGCCCTGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HLLRDSFILVPFYSAVLRCVILG*HNALAE Trigger: TTCAGCCAGGGCATTGTGCCAACCGAGTATCACACA...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTATGCTTTTAAAATTGTGAGCTTCAAACTAAGGGTCAATGATGCTCTGGGCTGTTTTCTCCAAGACTaGTCTACTGGACTGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: MYAFKIVSFKLRVNDALGCFLQD*STGLLC Trigger: ACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACA...GCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTATGCTTTTAAAATTGTGAGCTTCAAACTAAGGGTCAATGATGCTCTGGGCTACTGGACTGTTGTGTaGAGCAATGCATACAATTTA | + |
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Preference number: 2 (lower is better) Translates to: MYAFKIVSFKLRVNDALGYWTVV*SNAYNL Trigger: TAAATTGTATGCATTGCTTCACACAACAGTCCAGTA...GCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGATACTGGACTGTTGTGTaGAGCAATGCATACAATTTA | + |
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Preference number: 2 (lower is better) Translates to: HLLRDSFILVPFYSAVLRYWTVV*SNAYNL Trigger: TAAATTGTATGCATTGCTTCACACAACAGTCCAGTA...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGAGAATCCCTAAGGGAATaGTTGAAAACATACATGAAG | + |
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Preference number: 2 (lower is better) Translates to: HLLRDSFILVPFYSAVLRESLRE*LKTYMK Trigger: CTTCATGTATGTTTTCAACCATTCCCTTAGGGATTC...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR TCA 72 bp | GCTAAAATCTCTAACAACTTCTGTCAGGTAGATTCCTaGTGTGAACGTCCTCAGGAAACCTGCCACCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: AKISNNFCQVDS*CERPQETCHLA Trigger: GGCCAGGTGGCAGGTTTCCTGAGGACGTTCACATCAGGAATCTACCTGACAGAAGTTGTTAGAGATTTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR GCA 72 bp | CCTTTCCCTAGTCCTGGCTGCTGTTTTCTCCAAGACTaGTCTACTGGACTGTTGTGTGAAGCAATGCATACA | + |
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Preference number: 3 (lower is better) Translates to: PFPSPGCCFLQD*STGLLCEAMHT Trigger: TGTATGCATTGCTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAGGGAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR CCA 72 bp | TCTGTGCCAGTGTTACAGACATGTGTGATACTCGGTTaGCACAATGCCCTGGCTGAAGTTGATTTGCTATTA | + |
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Preference number: 3 (lower is better) Translates to: SVPVLQTCVILG*HNALAEVDLLL Trigger: TAATAGCAAATCAACTTCAGCCAGGGCATTGTGCCAACCGAGTATCACACATGTCTGTAACACTGGCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTATGCTTTTAAAATTGTGAGCTTCAAACTAAGGGTCAATGATGCTCTGGGCACGCAAGCACTGTTCTaGCATCTAATCAGATATCAA | + |
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Preference number: 3 (lower is better) Translates to: MYAFKIVSFKLRVNDALGTQALF*HLIRYQ Trigger: TTGATATCTGATTAGATGCAAGAACAGTGCTTGCGT...GCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR TCA 90 bp | TCAACCCTAGCCTCCCATTCTGTGAACAGACTGTGTAGGAGCAGTACAGCCTTCCTGGTCATCACTGGGTaGGGAAGGGTCAGGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: STLASHSVNRLCRSSTAFLVITG*GRVRVT Trigger: AGTGACCCTGACCCTTCCTCACCCAGTGATGACCAG...GAAGGCTGTACTGCTCCTACACAGTCTGTTCACAGAATGGGAGGCTAGGGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR CCA 90 bp | TCAACCCTAGCCTCCCATTCTGTGAACAGACTGTGTAGGAGCAGTACAGCCTTCCTAACGTGCCCCTGGTaGAGGCTACTGCTTCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: STLASHSVNRLCRSSTAFLTCPW*RLLLPE Trigger: TTCAGGAAGCAGTAGCCTCCACCAGGGGCACGTTAG...GAAGGCTGTACTGCTCCTACACAGTCTGTTCACAGAATGGGAGGCTAGGGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR TCA 90 bp | ATCATGATCCTTTCCCTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGAAAGCCGGGTCTCTGTaGGGCAAGGCTTGGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: IMILSLVLAAVFSKTALLKAGSL*GKAWAM Trigger: CATTGCCCAAGCCTTGCCTCACAGAGACCCGGCTTT...CAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAGGGAAAGGATCATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR TCA 90 bp | CTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGACTGTTGTGTGAAGCCCAGAGGAAGGCATTaGCTCATAGACCACCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: LVLAAVFSKTALLDCCVKPRGRH*LIDHQS Trigger: GGACTGGTGGTCTATGAGTCAATGCCTTCCTCTGGG...CTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR TCA 90 bp | TCAACCCTAGCCTCCCATTCTGTGAACAGACTGTGTAGGAGCAGTACAGCCTTCGCTGCACGCAGCTCTTaGGAGAGAATTCCTGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: STLASHSVNRLCRSSTAFAARSS*ERIPGD Trigger: ATCACCAGGAATTCTCTCTCAAGAGCTGCGTGCAGC...GAAGGCTGTACTGCTCCTACACAGTCTGTTCACAGAATGGGAGGCTAGGGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR GCA 90 bp | TCAACCCTAGCCTCCCATTCTGTGAACAGACTGTGTAGGAGCAGTACAGCCTTCAGCAGCACTGAAAGTTaGCAAAGCAGCTCCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: STLASHSVNRLCRSSTAFSSTES*QSSSLQ Trigger: CTGGAGGGAGCTGCTTTGGCAACTTTCAGTGCTGCT...GAAGGCTGTACTGCTCCTACACAGTCTGTTCACAGAATGGGAGGCTAGGGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR GCA 90 bp | TCAACCCTAGCCTCCCATTCTGTGAACAGACTGTGTAGGAGCAGTACAGCCTTCCCTGGTGGAGGCTACTaGTTCCTGAACACTCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: STLASHSVNRLCRSSTAFPGGGY*FLNTLH Trigger: ATGGAGAGTGTTCAGGAAGCAGTAGCCTCCACCAGG...GAAGGCTGTACTGCTCCTACACAGTCTGTTCACAGAATGGGAGGCTAGGGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CCA 90 bp | TCAACCCTAGCCTCCCATTCTGTGAACAGACTGTGTAGGAGCAGTACAGCCTTCTTAGCTGGTCATCACTaGGTGAGGAAGGGTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: STLASHSVNRLCRSSTAFLAGHH*VRKGQG Trigger: ACCCTGACCCTTCCTCACCCAGTGATGACCAGCTAA...GAAGGCTGTACTGCTCCTACACAGTCTGTTCACAGAATGGGAGGCTAGGGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR CCA 90 bp | ATCATGATCCTTTCCCTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGCCGTGAGGCTTAGCTaGTCATCACTGGGTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: IMILSLVLAAVFSKTALLAVRLS*SSLGEE Trigger: TTCCTCACCCAGTGATGACCAGCTAAGCCTCACGGC...CAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAGGGAAAGGATCATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR GCA 90 bp | ATCATGATCCTTTCCCTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGAGGCTCCCACACTTGTaGTTGGGTCATCCGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: IMILSLVLAAVFSKTALLRLPHL*LGHPHH Trigger: ATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCT...CAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAGGGAAAGGATCATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CCA 90 bp | TGTTTGTCTTGTCCCTCTCTTAGGTTCCTCTGTGCCAGTGTTACAGACATGTGTCCTCACTGGAGAAGGTaGCTTTCTGCTGCTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CLSCPSLRFLCASVTDMCPHWRR*LSAAAC Trigger: GCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGG...ACACATGTCTGTAACACTGGCACAGAGGAACCTAAGAGAGGGACAAGACAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR GCA 90 bp | CTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGACTGTTGTGTGAAGGTGGCTTTCTGCTGCTaGTTGCTTTCCCAAAATTCC | + |
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Preference number: 4 (lower is better) Translates to: LVLAAVFSKTALLDCCVKVAFCC*LLSQNS Trigger: GGAATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCAC...CTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CCA 90 bp | GGCTCCATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTCATCTAACGTGCCCCTaGTGGAGGCTACTGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSIFLETPLFLSLSTVQCHLTCP*WRLLLP Trigger: AGGAAGCAGTAGCCTCCACCAGGGGCACGTTAGATG...ACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CCA 90 bp | GGCTCCATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTGCCGTGAGGCTTAGCTaGTCATCACTGGGTGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GSIFLETPLFLSLSTVQCAVRLS*SSLGEE Trigger: TTCCTCACCCAGTGATGACCAGCTAAGCCTCACGGC...ACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| 3UTR CAA 72 bp | ATACTCGGTTGGCACAATGCCCTGGCTGAAGTTGATTaGCTATTAGATAGGGCCAGCCATGGCCATAACCTT | + |
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Preference number: 4 (lower is better) Translates to: ILGWHNALAEVD*LLDRASHGHNL Trigger: AAGGTTATGGCCATGGCTGGCCCTATCTAATAGCAAATCAACTTCAGCCAGGGCATTGTGCCAACCGAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR TCA 90 bp | TGTTTGTCTTGTCCCTCTCTTAGGTTCCTCTGTGCCAGTGTTACAGACATGTGTGAGGCTACTGCTTCCTaGACACTCTCCATGATGAAC | + |
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Preference number: 4 (lower is better) Translates to: CLSCPSLRFLCASVTDMCEATAS*TLSMMN Trigger: GTTCATCATGGAGAGTGTTCAGGAAGCAGTAGCCTC...ACACATGTCTGTAACACTGGCACAGAGGAACCTAAGAGAGGGACAAGACAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR GCA 90 bp | CTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGACTGTTGTGTGAAGAGGCTTCCATTCCAGTaGAGTAGTTGGAAAATGGTC | + |
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Preference number: 4 (lower is better) Translates to: LVLAAVFSKTALLDCCVKRLPFQ*SSWKMV Trigger: GACCATTTTCCAACTACTGCACTGGAATGGAAGCCT...CTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR CCA 90 bp | GGCTCCATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTTAGCTGGTCATCACTaGGTGAGGAAGGGTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: GSIFLETPLFLSLSTVQCLAGHH*VRKGQG Trigger: ACCCTGACCCTTCCTCACCCAGTGATGACCAGCTAA...ACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATGGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR TCA 90 bp | GAAAACATACATGAAGTAGGAAGTTGGGATCGGGATCAGTCAACCCTAGCCTCCAGTCTTCCCCATGTTTaGCTCCAGCATGTAGTGATA | + |
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Preference number: 4 (lower is better) Translates to: ENIHEVGSWDRDQSTLASSLPHV*LQHVVI Trigger: TATCACTACATGCTGGAGTCAAACATGGGGAAGACT...GGAGGCTAGGGTTGACTGATCCCGATCCCAACTTCCTACTTCATGTATGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR TCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGACTGGTCATCACTGGGTaGGGAAGGGTCAGGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: HLLRDSFILVPFYSAVLRLVITG*GRVRVT Trigger: AGTGACCCTGACCCTTCCTCACCCAGTGATGACCAG...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR TCA 90 bp | GGCTCCATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTTCCCTCCCAAGGAGTaGAGGAAAGCTGAAGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: GSIFLETPLFLSLSTVQCFPPKE*RKAEAY Trigger: ATAGGCTTCAGCTTTCCTTCACTCCTTGGGAGGGAA...ACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140134.2 |
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| CDS-3UTR GCA 90 bp | CTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGACTGTTGTGTGAAGCTTTCTGCTGCTGCTTaGTTTCCCAAAATTCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: LVLAAVFSKTALLDCCVKLSAAA*FPKIPV Trigger: TACAGGAATTTTGGGAAAGCAAGCAGCAGCAGAAAG...CTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR GCA 90 bp | ATCATGATCCTTTCCCTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGAAGGTGGCTTTCTGCTaGTGCTTGCTTTCCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: IMILSLVLAAVFSKTALLKVAFC*CLLSQN Trigger: ATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTT...CAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAGGGAAAGGATCATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGACTTGTCCAGCCTTCCTaGCTTCCTCCAGCTGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: HLLRDSFILVPFYSAVLRLVQPS*LPPAAL Trigger: TAGGGCAGCTGGAGGAAGCCAGGAAGGCTGGACAAG...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR CCA 90 bp | ATGTATGCTTTTAAAATTGTGAGCTTCAAACTAAGGGTCAATGATGCTCTGGGCCTTGTCCAGCCTTCCTaGCTTCCTCCAGCTGCCCTA | + |
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Preference number: 4 (lower is better) Translates to: MYAFKIVSFKLRVNDALGLVQPS*LPPAAL Trigger: TAGGGCAGCTGGAGGAAGCCAGGAAGGCTGGACAAG...GCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR GCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGAGAGAAGGTGGCTTTCTaGTGCTGCTTGCTTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: HLLRDSFILVPFYSAVLREKVAF*CCLLSQ Trigger: TTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTC...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CCA 90 bp | ATGTATGCTTTTAAAATTGTGAGCTTCAAACTAAGGGTCAATGATGCTCTGGGCCAGTCCAGGGCCATGTaGCTACGCATCTTTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: MYAFKIVSFKLRVNDALGQSRAM*LRIFSS Trigger: AGATGAAAAGATGCGTAGCCACATGGCCCTGGACTG...GCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR GCA 90 bp | ATGTATGCTTTTAAAATTGTGAGCTTCAAACTAAGGGTCAATGATGCTCTGGGCGCTTGGGCAATGATGTaGCTCAGAGATTCCAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: MYAFKIVSFKLRVNDALGAWAMM*LRDSKV Trigger: AACCTTGGAATCTCTGAGGCACATCATTGCCCAAGC...GCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR GCA 90 bp | ATGTATGCTTTTAAAATTGTGAGCTTCAAACTAAGGGTCAATGATGCTCTGGGCAGGCTTCCATTCCAGTaGAGTAGTTGGAAAATGGTC | + |
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Preference number: 4 (lower is better) Translates to: MYAFKIVSFKLRVNDALGRLPFQ*SSWKMV Trigger: GACCATTTTCCAACTACTGCACTGGAATGGAAGCCT...GCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR CCA 90 bp | GGCTCCATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTGCAGTAGTTGGAAAATaGTCATTAGTTCCTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: GSIFLETPLFLSLSTVQCAVVGK*SLVPET Trigger: AGTTTCAGGAACTAATGACCATTTTCCAACTACTGC...ACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATGGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| 3UTR CAA 72 bp | TTGTACAGTGTCATAATTATAAAAGAGAGGAGAAGCTaGACCCACGCAAGCACTGTTCTTGCATCTAATCAG | + |
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Preference number: 4 (lower is better) Translates to: LYSVIIIKERRS*THASTVLASNQ Trigger: CTGATTAGATGCAAGAACAGTGCTTGCGTGGGTCAAGCTTCTCCTCTCTTTTATAATTATGACACTGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS-3UTR CCA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGAGCAGTAGTTGGAAAATaGTCATTAGTTCCTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: HLLRDSFILVPFYSAVLRAVVGK*SLVPHN Trigger: ATTGTGAGGAACTAATGACCATTTTCCAACTACTGC...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140134.2 |
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| CDS TCA 90 bp | GCCTTCCTGGCTTCCTCCAGCTGCCCTAGGGCTGCACGCAGCTCTTaGGAGAGAATTCCTGGTGATTCACGCTCCTTCATAATCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: AFLASSSCPRAARSS*ERIPGDSRSFIIQS Trigger: GGACTGGATTATGAAGGAGCGTGAATCACCAGGAATTCTCTCTCAAGAGCTGCGTGCAGCCCTAGGGCAGCTGGAGGAAGCCAGGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS TCA 90 bp | AGGGAGAGTCACATAGCTCACAAAGGGAGGCCCAGAGGAAGGCATTaGCTCATAGACCACCAGTCCCTCACTGGAGAAGGTGGCTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: RESHIAHKGRPRGRH*LIDHQSLTGEGGFL Trigger: CAGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCTCTGGGCCTCCCTTTGTGAGCTATGTGACTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS TCA 90 bp | TCATCCGCATCATCTAACGTGCCCCTGGTGGAGGCTACTGCTTCCTaGACACTCTCCATGATGAACTCCTTGGTGATCCTTCGGGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: SSASSNVPLVEATAS*TLSMMNSLVILREG Trigger: ACCCTCCCGAAGGATCACCAAGGAGTTCATCATGGAGAGTGTTCAGGAAGCAGTAGCCTCCACCAGGGGCACGTTAGATGATGCGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS GCA 90 bp | TCCCCATGTTTGACTCCAGCATGTAGTGATAGGCTCCCACACTTGTaGTTGGGTCATCCGCATCATCTAACGTGCCCCTGGTGGAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: SPCLTPACSDRLPHL*LGHPHHLTCPWWRL Trigger: TAGCCTCCACCAGGGGCACGTTAGATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCTATCACTACATGCTGGAGTCAAACATGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS TCA 90 bp | TGGTCATTAGTTCCTCACAATAGGCACTCCTTCCCTCCCAAGGAGTaGAGGAAAGCTGAAGCCTATTGCGGTTCCTCAGCGCAGCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: WSLVPHNRHSFPPKE*RKAEAYCGSSAQQD Trigger: GTCCTGCTGCGCTGAGGAACCGCAATAGGCTTCAGCTTTCCTTCACTCCTTGGGAGGGAAGGAGTGCCTATTGTGAGGAACTAATGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140134.2 |
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| CDS CCA 90 bp | GAGGCCCAGAGGAAGGCATTGACTCATAGACCACCAGTCCCTCACTaGAGAAGGTGGCTTTCTGCTGCTGCTTGCTTTCCCAAAATTCCT | + |
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Preference number: 5 (lower is better) Translates to: EAQRKALTHRPPVPH*RRWLSAAACFPKIP Trigger: AGGAATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCTCTGGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CAA 90 bp | CTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGACTGTTGTGTGAAGTCTGTGAGGCAAGGCTaGGGCAATGATGTGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LVLAAVFSKTALLDCCVKSVRQG*GNDVPQ Trigger: CTGAGGCACATCATTGCCCAAGCCTTGCCTCACAGA...CTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CCA 90 bp | AGGAAGGCATTGACTCATAGACCACCAGTCCCTCACTGGAGAAGGTaGCTTTCTGCTGCTGCTTGCTTTCCCAAAATTCCTGTAACATTG | + |
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Preference number: 5 (lower is better) Translates to: RKALTHRPPVPHWRR*LSAAACFPKIPVTL Trigger: CAATGTTACAGGAATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CAA 90 bp | TGTTTGTCTTGTCCCTCTCTTAGGTTCCTCTGTGCCAGTGTTACAGACATGTGTCGGGAGGGTAGCTCATaGAAGAGAGAGTTGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: CLSCPSLRFLCASVTDMCREGSS*KRELMS Trigger: GCTCATCAACTCTCTCTTCAATGAGCTACCCTCCCG...ACACATGTCTGTAACACTGGCACAGAGGAACCTAAGAGAGGGACAAGACAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS TCA 90 bp | ATTGACACAACATTCAAGTCTTTGAAGACCAAAGCCGGGTCTCTGTaGGGCAAGGCTTGGGCAATGATGTGCCTCAGAGATTCCAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: IDTTFKSLKTKAGSL*GKAWAMMCLRDSKV Trigger: AACCTTGGAATCTCTGAGGCACATCATTGCCCAAGCCTTGCCTCACAGAGACCCGGCTTTGGTCTTCAAAGACTTGAATGTTGTGTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CAA 90 bp | CTAGTCCTGGCTGCTGTTTTCTCCAAGACTGCTCTACTGGACTGTTGTGTGAAGACAACATTCAAGTCTTaGAAGACCAAAGCCGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LVLAAVFSKTALLDCCVKTTFKS*KTKAGS Trigger: AGACCCGGCTTTGGTCTTCAAAGACTTGAATGTTGT...CTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS GCA 90 bp | AGACCACCAGTCCCTCACTGGAGAAGGTGGCTTTCTGCTGCTGCTTaGTTTCCCAAAATTCCTGTAACATTGACACAACATTCAAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: RPPVPHWRRWLSAAA*FPKIPVTLTQHSSL Trigger: AAGACTTGAATGTTGTGTCAATGTTACAGGAATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS-3UTR CAA 90 bp | CATCTTCTTAGAGACTCCTTTATTCTTGTCCCTTTCTACAGTGCAGTGTTAAGATCATTGAAGAGAGAGTaGATGAGCGCCACTTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: HLLRDSFILVPFYSAVLRSLKRE*MSATLA Trigger: TGCTAAAGTGGCGCTCATCAACTCTCTCTTCAATGA...TCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 72 bp | GTGATCCTTCGGGAGGGTAGCTCATTGAAGAGAGAGTaGATGAGCGCCACTTTAGCAGCATCCCGCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: VILREGSSLKRE*MSATLAASRLA Trigger: GGCCAGGCGGGATGCTGCTAAAGTGGCGCTCATCAACTCTCTCTTCAATGAGCTACCCTCCCGAAGGATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 72 bp | ACTCCAGCATGTAGTGATAGGCTCCCACACTTGTGCTaGGGTCATCCGCATCATCTAACGTGCCCCTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TPACSDRLPHLC*GHPHHLTCPWW Trigger: CCACCAGGGGCACGTTAGATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCTATCACTACATGCTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 90 bp | CAGGGAGAGTCACATAGCTCACAAAGGGAGGCCCAGAGGAAGGCATaGACTCATAGACCACCAGTCCCTCACTGGAGAAGGTGGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: QGESHSSQREAQRKA*THRPPVPHWRRWLS Trigger: AGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCTCTGGGCCTCCCTTTGTGAGCTATGTGACTCTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 90 bp | AACTCCTTGGTGATCCTTCGGGAGGGTAGCTCATTGAAGAGAGAGTaGATGAGCGCCACTTTAGCAGCATCCCGCCTGGCCTCAGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: NSLVILREGSSLKRE*MSATLAASRLASAL Trigger: TAGAGCTGAGGCCAGGCGGGATGCTGCTAAAGTGGCGCTCATCAACTCTCTCTTCAATGAGCTACCCTCCCGAAGGATCACCAAGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 90 bp | CCATGTTTGACTCCAGCATGTAGTGATAGGCTCCCACACTTGTGCTaGGGTCATCCGCATCATCTAACGTGCCCCTGGTGGAGGCTACTG | + |
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Preference number: 6 (lower is better) Translates to: PCLTPACSDRLPHLC*GHPHHLTCPWWRLL Trigger: CAGTAGCCTCCACCAGGGGCACGTTAGATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCTATCACTACATGCTGGAGTCAAACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 90 bp | TCTTCCCCATGTTTGACTCCAGCATGTAGTGATAGGCTCCCACACTaGTGCTTGGGTCATCCGCATCATCTAACGTGCCCCTGGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSPCLTPACSDRLPH*CLGHPHHLTCPWWR Trigger: CCTCCACCAGGGGCACGTTAGATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCTATCACTACATGCTGGAGTCAAACATGGGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS TCA 72 bp | CACATAGCTCACAAAGGGAGGCCCAGAGGAAGGCATTaGCTCATAGACCACCAGTCCCTCACTGGAGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: HIAHKGRPRGRH*LIDHQSLTGEG Trigger: ACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCTCTGGGCCTCCCTTTGTGAGCTATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS TCA 72 bp | GTTCCTCACAATAGGCACTCCTTCCCTCCCAAGGAGTaGAGGAAAGCTGAAGCCTATTGCGGTTCCTCAGCG | + |
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Preference number: 6 (lower is better) Translates to: VPHNRHSFPPKE*RKAEAYCGSSA Trigger: CGCTGAGGAACCGCAATAGGCTTCAGCTTTCCTTCACTCCTTGGGAGGGAAGGAGTGCCTATTGTGAGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140134.2 |
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| CDS GCA 72 bp | TTGACTCCAGCATGTAGTGATAGGCTCCCACACTTGTaGTTGGGTCATCCGCATCATCTAACGTGCCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LTPACSDRLPHL*LGHPHHLTCPW Trigger: CCAGGGGCACGTTAGATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCTATCACTACATGCTGGAGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CCA 72 bp | AGGAAGGCATTGACTCATAGACCACCAGTCCCTCACTaGAGAAGGTGGCTTTCTGCTGCTGCTTGCTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: RKALTHRPPVPH*RRWLSAAACFP Trigger: GGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 72 bp | TCACATAGCTCACAAAGGGAGGCCCAGAGGAAGGCATaGACTCATAGACCACCAGTCCCTCACTGGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SHSSQREAQRKA*THRPPVPHWRR Trigger: CCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCTCTGGGCCTCCCTTTGTGAGCTATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CAA 90 bp | CTCTCCATGATGAACTCCTTGGTGATCCTTCGGGAGGGTAGCTCATaGAAGAGAGAGTTGATGAGCGCCACTTTAGCAGCATCCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSMMNSLVILREGSS*KRELMSATLAASRL Trigger: CAGGCGGGATGCTGCTAAAGTGGCGCTCATCAACTCTCTCTTCAATGAGCTACCCTCCCGAAGGATCACCAAGGAGTTCATCATGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CCA 72 bp | TTTCTTTGTAAAATCGTAGTTCTTGTCCAGCCTTCCTaGCTTCCTCCAGCTGCCCTAGGGCTGCACGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FLCKIVVLVQPS*LPPAALGLHAA Trigger: AGCTGCGTGCAGCCCTAGGGCAGCTGGAGGAAGCCAGGAAGGCTGGACAAGAACTACGATTTTACAAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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| CDS CAA 72 bp | TGTTTGACTCCAGCATGTAGTGATAGGCTCCCACACTaGTGCTTGGGTCATCCGCATCATCTAACGTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: CLTPACSDRLPH*CLGHPHHLTCP Trigger: GGGGCACGTTAGATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCTATCACTACATGCTGGAGTCAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS TCA 72 bp | TCATCTAACGTGCCCCTGGTGGAGGCTACTGCTTCCTaGACACTCTCCATGATGAACTCCTTGGTGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSNVPLVEATAS*TLSMMNSLVIL Trigger: AAGGATCACCAAGGAGTTCATCATGGAGAGTGTTCAGGAAGCAGTAGCCTCCACCAGGGGCACGTTAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS TCA 72 bp | ACATTCAAGTCTTTGAAGACCAAAGCCGGGTCTCTGTaGGGCAAGGCTTGGGCAATGATGTGCCTCAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: TFKSLKTKAGSL*GKAWAMMCLRD Trigger: ATCTCTGAGGCACATCATTGCCCAAGCCTTGCCTCACAGAGACCCGGCTTTGGTCTTCAAAGACTTGAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS CCA 72 bp | TTGACTCATAGACCACCAGTCCCTCACTGGAGAAGGTaGCTTTCTGCTGCTGCTTGCTTTCCCAAAATTCCT | + |
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Preference number: 6 (lower is better) Translates to: LTHRPPVPHWRR*LSAAACFPKIP Trigger: AGGAATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS GCA 72 bp | ACCAGTCCCTCACTGGAGAAGGTGGCTTTCTGCTGCTaGTTGCTTTCCCAAAATTCCTGTAACATTGACACA | + |
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Preference number: 6 (lower is better) Translates to: TSPSLEKVAFCC*LLSQNSCNIDT Trigger: TGTGTCAATGTTACAGGAATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGGGACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115576.3 |
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| CDS GCA 72 bp | TTTGTTTCACGGAGGGCTTTCAGGCTTCCATTCCAGTaGAGTAGTTGGAAAATGGTCATTAGTTCCTCACAA | + |
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Preference number: 6 (lower is better) Translates to: FVSRRAFRLPFQ*SSWKMVISSSQ Trigger: TTGTGAGGAACTAATGACCATTTTCCAACTACTGCACTGGAATGGAAGCCTGAAAGCCCTCCGTGAAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140134.2 |
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| CDS CCA 72 bp | GATTCACGCTCCTTCATAATCCAGTCCAGGGCCATGTaGCTACGCATCTTTTCATCTAAAGAATATTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: DSRSFIIQSRAM*LRIFSSKEYWE Trigger: TTCCCAATATTCTTTAGATGAAAAGATGCGTAGCCACATGGCCCTGGACTGGATTATGAAGGAGCGTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115576.3 ENSMUST00000140134.2 |
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