Pregenerated sensors for LIPT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037216Ensembl transcript IDs: ENSMUST00000041621.5, ENSMUST00000128085.2, ENSMUST00000142670.2, ENSMUST00000144440.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GAAATGGAAGAGGACGAGGCCCTGAAAGTGCCAAAACCCTTAACAGATTATCAAACAAAAGCTGAGGAGTaGAAATTAGGGACAGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: EMEEDEALKVPKPLTDYQTKAEE*KLGTGH Trigger: GTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGT...TTGATAATCTGTTAAGGGTTTTGGCACTTTCAGGGCCTCGTCCTCTTCCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR TCA 90 bp | CAAAGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCTCCTCCGAGCCAGTTTaGTTCCTTCCTGTCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: QSLTKAEELKLGTGHLKTSSEPV*FLPVSS Trigger: TGATGAGACAGGAAGGAATCAAACTGGCTCGGAGGA...GGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR GCA 90 bp | CAAAGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCGCTTTTAAAGCCAGCTaGTGGGACCTTGTGCTGACA | + |
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Preference number: 4 (lower is better) Translates to: QSLTKAEELKLGTGHLKTAFKAS*WDLVLT Trigger: TGTCAGCACAAGGTCCCAGCAGCTGGCTTTAAAAGC...GGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCTTTAAAGCCAGCTGCTaGGACCTTGTGCTGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: QSLTKAEELKLGTGHLKTFKASC*DLVLTK Trigger: CTTTGTCAGCACAAGGTCCCAGCAGCTGGCTTTAAA...GGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CCA 90 bp | AGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCAACTCCTGTCTCATCAGATaGAGGTTACATTCCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLTKAEELKLGTGHLKTNSCLIR*RLHSCH Trigger: GTGGCAGGAATGTAACCTCCATCTGATGAGACAGGA...GTTGGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCCCTTCTAGATGTATGTaGTCGTGGATCCAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLTKAEELKLGTGHLKTPSRCM*SWIQSS Trigger: TGAAGACTGGATCCACGACCACATACATCTAGAAGG...GGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR TCA 90 bp | AGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCAACCAGGGTTTATTAGGTTaGCGTGACCATCAACTTGAT | + |
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Preference number: 4 (lower is better) Translates to: SLTKAEELKLGTGHLKTNQGLLG*RDHQLD Trigger: ATCAAGTTGATGGTCACGTCAACCTAATAAACCCTG...GTTGGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR TCA 90 bp | GAAATGGAAGAGGACGAGGCCCTGAAAGTGCCAAAACCCTTAACAGATTATCAAAACTTTGCAGTTCCTTaGCTTTGCGGTTTATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMEEDEALKVPKPLTDYQNFAVP*LCGLFQ Trigger: CTGGAATAAACCGCAAAGTCAAGGAACTGCAAAGTT...TTGATAATCTGTTAAGGGTTTTGGCACTTTCAGGGCCTCGTCCTCTTCCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| 3UTR CAA 72 bp | CAGATTATCAATCAAAGTCTGACAAAAGCTGAGGAGTaGAAATTAGGGACAGGCCACCTCAAGACCAACACA | + |
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Preference number: 4 (lower is better) Translates to: QIINQSLTKAEE*KLGTGHLKTNT Trigger: TGTGTTGGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTGATTGATAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CCA 90 bp | CAACACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTACATCCAGCTGGGGTTaGACAGCATTCAGAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: QHRFKLTPLFLLRYKTNCTSSWG*TAFRAL Trigger: GAGAGCTCTGAATGCTGTCCAACCCCAGCTGGATGT...ACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR GCA 90 bp | CACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTAGTCCTGAGATTTTAAACTaGCCGTCGAGTAGCAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRFKLTPLFLLRYKTNCSPEILN*PSSSRS Trigger: TGACCTGCTACTCGACGGGCAGTTTAAAATCTCAGG...ACTACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR GCA 90 bp | CACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTAGTACTTGGATTTCCAAATaGGCCTGCTCATACGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HRFKLTPLFLLRYKTNCSTWISK*ACSYGT Trigger: TGTGCCGTATGAGCAGGCGCATTTGGAAATCCAAGT...ACTACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CCA 90 bp | CACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTAGTCTTCACAGGTCAGCGTaGAATCTCTTTCCAGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: HRFKLTPLFLLRYKTNCSLHRSA*NLFPEG Trigger: ACCTTCTGGAAAGAGATTCCACGCTGACCTGTGAAG...ACTACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CCA 90 bp | CACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTAGTAGATGTATGTGGTCGTaGATCCAGTCTTCAAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: HRFKLTPLFLLRYKTNCSRCMWS*IQSSKA Trigger: GGCTTTTGAAGACTGGATCCACGACCACATACATCT...ACTACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR TCA 90 bp | CACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTAGTCGTTCTTTACATCCATaGACACTTGGATTTCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: HRFKLTPLFLLRYKTNCSRSLHP*TLGFPN Trigger: ATTTGGAAATCCAAGTGTTCATGGATGTAAAGAACG...ACTACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS GCA 90 bp | CGCAGTACGGGCTCTTCAGCGAAGAAGACAGAGCTGTCCGGTTGGTaGTGCATAGCAAGGTGCAGTGGTGGTACGCGGCAGTCCGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: RSTGSSAKKTELSGW*CIARCSGGTRQSGR Trigger: TCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTCTTCGCTGAAGAGCCCGTACTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS GCA 90 bp | AGTACGGGCTCTTCAGCGAAGAAGACAGAGCTGTCCGGTTGGTGCTaGATAGCAAGGTGCAGTGGTGGTACGCGGCAGTCCGGCCGATCT | + |
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Preference number: 5 (lower is better) Translates to: STGSSAKKTELSGWC*IARCSGGTRQSGRS Trigger: AGATCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTCTTCGCTGAAGAGCCCGTACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS GCA 90 bp | TCAGCGAAGAAGACAGAGCTGTCCGGTTGGTGCTGCATAGCAAGGTaGAGTGGTGGTACGCGGCAGTCCGGCCGATCTTTGATGCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SAKKTELSGWCCIAR*SGGTRQSGRSLMRF Trigger: GAACCGCATCAAAGATCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTCTTCGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CCA 90 bp | GAAGAAGACAGAGCTGTCCGGTTGGTGCTGCATAGCAAGGTGCAGTaGTGGTACGCGGCAGTCCGGCCGATCTTTGATGCGGTTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: EEDRAVRLVLHSKVQ*WYAAVRPIFDAVPE Trigger: CTCAGGAACCGCATCAAAGATCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CCA 90 bp | GAAGACAGAGCTGTCCGGTTGGTGCTGCATAGCAAGGTGCAGTGGTaGTACGCGGCAGTCCGGCCGATCTTTGATGCGGTTCCTGAGATT | + |
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Preference number: 5 (lower is better) Translates to: EDRAVRLVLHSKVQW*YAAVRPIFDAVPEI Trigger: AATCTCAGGAACCGCATCAAAGATCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS TCA 90 bp | TCAGAACTTCACAGGTCAGCGTGGAATCTCTTTCCAGAAGGTTTTTaGCAGCGGAAGGGATGCTGGGAGTGGCGTTGCTCTTTATCCCGC | + |
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Preference number: 5 (lower is better) Translates to: SELHRSAWNLFPEGF*QRKGCWEWRCSLSR Trigger: GCGGGATAAAGAGCAACGCCACTCCCAGCATCCCTTCCGCTGTCAAAAACCTTCTGGAAAGAGATTCCACGCTGACCTGTGAAGTTCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041621.5 ENSMUST00000144440.2 |
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| CDS TCA 90 bp | ACTTGGGAGTCCTGCCGTATACCCACTCCCAACTTTGCAGTTCCTTaGCTTTGCGGTTTATTCCAGGGAACATCGTCTCATCTGCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: TWESCRIPTPNFAVP*LCGLFQGTSSHLQG Trigger: ACCCTGCAGATGAGACGATGTTCCCTGGAATAAACCGCAAAGTCAAGGAACTGCAAAGTTGGGAGTGGGTATACGGCAGGACTCCCAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CAA 90 bp | CAAAGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCATGCTGGGAGTGGCGTaGCTCTTTATCCCGCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: QSLTKAEELKLGTGHLKTMLGVA*LFIPQY Trigger: GTACTGCGGGATAAAGAGCAACGCCACTCCCAGCAT...GGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS TCA 90 bp | TCAGATGGAGGTTACATTCCTGCCACGGATTCTGATGCCTGCCGATaGCGACAGAAGGAGAATTTCTCCAAAGGAAAAGAATCGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SDGGYIPATDSDACR*RQKENFSKGKESAC Trigger: GCAAGCCGATTCTTTTCCTTTGGAGAAATTCTCCTTCTGTCGTCATCGGCAGGCATCAGAATCCGTGGCAGGAATGTAACCTCCATCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS TCA 90 bp | CCTTCCTGTCTCATCAGATGGAGGTTACATTCCTGCCACGGATTCTaGTGCCTGCCGATGACGACAGAAGGAGAATTTCTCCAAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: PSCLIRWRLHSCHGF*CLPMTTEGEFLQRK Trigger: TTTCCTTTGGAGAAATTCTCCTTCTGTCGTCATCGGCAGGCATCAGAATCCGTGGCAGGAATGTAACCTCCATCTGATGAGACAGGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCCTTTCCAGAAGGTTTTaGACAGCGGAAGGGATGCTG | + |
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Preference number: 5 (lower is better) Translates to: QSLTKAEELKLGTGHLKTLSRRF*TAEGML Trigger: CAGCATCCCTTCCGCTGTCAAAAACCTTCTGGAAAG...GGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS TCA 90 bp | CCATGTGTGGGTGGGCTTTTAAAGCCAGCTGCTGGGACCTTGTGCTaGCAAAGTAATCGGAAGCAATTCTTCATTGAAAGTGGAATTAGC | + |
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Preference number: 5 (lower is better) Translates to: PCVGGLLKPAAGTLC*QSNRKQFFIESGIS Trigger: GCTAATTCCACTTTCAATGAAGAATTGCTTCCGATTACTTTGTCAGCACAAGGTCCCAGCAGCTGGCTTTAAAAGCCCACCCACACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS-3UTR CAA 90 bp | CAAAGTCTGACAAAAGCTGAGGAGTTGAAATTAGGGACAGGCCACCTCAAGACCTACATCCATGAACACTaGGATTTCCAAATGCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: QSLTKAEELKLGTGHLKTYIHEH*DFQMRL Trigger: CAGGCGCATTTGGAAATCCAAGTGTTCATGGATGTA...GGTCTTGAGGTGGCCTGTCCCTAATTTCAACTCCTCAGCTTTTGTCAGACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CAA 90 bp | GAAATGGAAGAGGACGAGGCCCTGAAAGTGCCAAAACCCTTAACAGATTATCAATCAACGGGGCAGAATTaGCTGCCGATGAAACTTGAG | + |
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Preference number: 5 (lower is better) Translates to: EMEEDEALKVPKPLTDYQSTGQN*LPMKLE Trigger: CTCAAGTTTCATCGGCAGCAAATTCTGCCCCGTTGA...TTGATAATCTGTTAAGGGTTTTGGCACTTTCAGGGCCTCGTCCTCTTCCATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CAA 90 bp | CAACACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTCACATCCAGCTGGGGTaGGACAGCATTCAGAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: QHRFKLTPLFLLRYKTNCHIQLG*DSIQSS Trigger: AGAGCTCTGAATGCTGTCCAACCCCAGCTGGATGTG...ACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CAA 90 bp | CAACACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTCAGTCCGGCCGATCTTaGATGCGGTTCCTGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: QHRFKLTPLFLLRYKTNCQSGRS*MRFLRF Trigger: AAATCTCAGGAACCGCATCAAAGATCGGCCGGACTG...ACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CAA 90 bp | CAACACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTAGCAGGTCAAACTTTTaGGTAGGCTGCACATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: QHRFKLTPLFLLRYKTNCSRSNF*VGCTSS Trigger: GCTGGATGTGCAGCCTACCAAAAAGTTTGACCTGCT...ACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS-3UTR CAA 90 bp | CAACACAGGTTCAAACTGACACCCCTATTTCTGTTAAGATATAAGACAAATTGTTGCAGTTCCTTGACTTaGCGGTTTATTCCAGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: QHRFKLTPLFLLRYKTNCCSSLT*RFIPGN Trigger: GTTCCCTGGAATAAACCGCAAAGTCAAGGAACTGCA...ACAATTTGTCTTATATCTTAACAGAAATAGGGGTGTCAGTTTGAACCTGTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS CCA 72 bp | GCTGTCCGGTTGGTGCTGCATAGCAAGGTGCAGTGGTaGTACGCGGCAGTCCGGCCGATCTTTGATGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: AVRLVLHSKVQW*YAAVRPIFDAV Trigger: AACCGCATCAAAGATCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CCA 72 bp | AGAGCTGTCCGGTTGGTGCTGCATAGCAAGGTGCAGTaGTGGTACGCGGCAGTCCGGCCGATCTTTGATGCG | + |
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Preference number: 6 (lower is better) Translates to: RAVRLVLHSKVQ*WYAAVRPIFDA Trigger: CGCATCAAAGATCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS GCA 72 bp | AAGACAGAGCTGTCCGGTTGGTGCTGCATAGCAAGGTaGAGTGGTGGTACGCGGCAGTCCGGCCGATCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KTELSGWCCIAR*SGGTRQSGRSL Trigger: CAAAGATCGGCCGGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CCA 72 bp | ACGGGCTCTTCAGCGAAGAAGACAGAGCTGTCCGGTTaGTGCTGCATAGCAAGGTGCAGTGGTGGTACGCGG | + |
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Preference number: 6 (lower is better) Translates to: TGSSAKKTELSG*CCIARCSGGTR Trigger: CCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTCTTCGCTGAAGAGCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS GCA 72 bp | TCTTCAGCGAAGAAGACAGAGCTGTCCGGTTGGTGCTaGATAGCAAGGTGCAGTGGTGGTACGCGGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSAKKTELSGWC*IARCSGGTRQS Trigger: GGACTGCCGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTCTTCGCTGAAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CAA 72 bp | TACGGGCTCTTCAGCGAAGAAGACAGAGCTGTCCGGTaGGTGCTGCATAGCAAGGTGCAGTGGTGGTACGCG | + |
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Preference number: 6 (lower is better) Translates to: YGLFSEEDRAVR*VLHSKVQWWYA Trigger: CGCGTACCACCACTGCACCTTGCTATGCAGCACCAACCGGACAGCTCTGTCTTCTTCGCTGAAGAGCCCGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041621.5 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS GCA 72 bp | GACGTGACCATCAACTTGATGATGCGCCGCGTACTCTaGAGCCACCGCACTCATCAGAACTTCACAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: DVTINLMMRRVL*SHRTHQNFTGQ Trigger: CTGACCTGTGAAGTTCTGATGAGTGCGGTGGCTGCAGAGTACGCGGCGCATCATCAAGTTGATGGTCACGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS CAA 72 bp | AGGTTTTTGACAGCGGAAGGGATGCTGGGAGTGGCGTaGCTCTTTATCCCGCAGTACGGGCTCTTCAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: RFLTAEGMLGVA*LFIPQYGLFSE Trigger: TTCGCTGAAGAGCCCGTACTGCGGGATAAAGAGCAACGCCACTCCCAGCATCCCTTCCGCTGTCAAAAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041621.5 ENSMUST00000144440.2 |
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| CDS TCA 72 bp | CACAGGTCAGCGTGGAATCTCTTTCCAGAAGGTTTTTaGCAGCGGAAGGGATGCTGGGAGTGGCGTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HRSAWNLFPEGF*QRKGCWEWRCS Trigger: AGAGCAACGCCACTCCCAGCATCCCTTCCGCTGTCAAAAACCTTCTGGAAAGAGATTCCACGCTGACCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041621.5 ENSMUST00000144440.2 |
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| CDS CAA 90 bp | AACTTGGGAGTCCTGCCGTATACCCACTCCCAACTTTGCAGTTCCTaGACTTTGCGGTTTATTCCAGGGAACATCGTCTCATCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: NLGVLPYTHSQLCSS*TLRFIPGNIVSSAG Trigger: CCCTGCAGATGAGACGATGTTCCCTGGAATAAACCGCAAAGTCAAGGAACTGCAAAGTTGGGAGTGGGTATACGGCAGGACTCCCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS TCA 72 bp | CTCATCAGATGGAGGTTACATTCCTGCCACGGATTCTaGTGCCTGCCGATGACGACAGAAGGAGAATTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LIRWRLHSCHGF*CLPMTTEGEFL Trigger: GAGAAATTCTCCTTCTGTCGTCATCGGCAGGCATCAGAATCCGTGGCAGGAATGTAACCTCCATCTGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CAA 90 bp | GGAGTCCTGCCGTATACCCACTCCCAACTTTGCAGTTCCTTGACTTaGCGGTTTATTCCAGGGAACATCGTCTCATCTGCAGGGTTTATT | + |
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Preference number: 6 (lower is better) Translates to: GVLPYTHSQLCSSLT*RFIPGNIVSSAGFI Trigger: AATAAACCCTGCAGATGAGACGATGTTCCCTGGAATAAACCGCAAAGTCAAGGAACTGCAAAGTTGGGAGTGGGTATACGGCAGGACTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS TCA 72 bp | TCCTGCCGTATACCCACTCCCAACTTTGCAGTTCCTTaGCTTTGCGGTTTATTCCAGGGAACATCGTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SCRIPTPNFAVP*LCGLFQGTSSH Trigger: ATGAGACGATGTTCCCTGGAATAAACCGCAAAGTCAAGGAACTGCAAAGTTGGGAGTGGGTATACGGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS CAA 90 bp | CCGATGACGACAGAAGGAGAATTTCTCCAAAGGAAAAGAATCGGCTaGCCTTCTAGATGTATGTGGTCGTGGATCCAGTCTTCAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PMTTEGEFLQRKRIG*PSRCMWSWIQSSKA Trigger: GGCTTTTGAAGACTGGATCCACGACCACATACATCTAGAAGGCAAGCCGATTCTTTTCCTTTGGAGAAATTCTCCTTCTGTCGTCATCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS TCA 72 bp | GGTTACATTCCTGCCACGGATTCTGATGCCTGCCGATaGCGACAGAAGGAGAATTTCTCCAAAGGAAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: GYIPATDSDACR*RQKENFSKGKE Trigger: TTCTTTTCCTTTGGAGAAATTCTCCTTCTGTCGTCATCGGCAGGCATCAGAATCCGTGGCAGGAATGTAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS TCA 72 bp | GCAGGGTGGTTTCAACGGGGCAGAATTTGCTGCCGATaGAACTTGAGTTTAATTTCTCACCTATTTCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: AGWFQRGRICCR*NLSLISHLFPA Trigger: CGCTGGAAATAGGTGAGAAATTAAACTCAAGTTTCATCGGCAGCAAATTCTGCCCCGTTGAAACCACCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS CAA 72 bp | GGTTTCGATTCGTCCGTTCTTTACATCCATGAACACTaGGATTTCCAAATGCGCCTGCTCATACGGCACATG | + |
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Preference number: 6 (lower is better) Translates to: GFDSSVLYIHEH*DFQMRLLIRHM Trigger: CATGTGCCGTATGAGCAGGCGCATTTGGAAATCCAAGTGTTCATGGATGTAAAGAACGGACGAATCGAAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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| CDS TCA 72 bp | GGTGGGCTTTTAAAGCCAGCTGCTGGGACCTTGTGCTaGCAAAGTAATCGGAAGCAATTCTTCATTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GGLLKPAAGTLC*QSNRKQFFIES Trigger: ACTTTCAATGAAGAATTGCTTCCGATTACTTTGTCAGCACAAGGTCCCAGCAGCTGGCTTTAAAAGCCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CAA 72 bp | ACAGAAGGAGAATTTCTCCAAAGGAAAAGAATCGGCTaGCCTTCTAGATGTATGTGGTCGTGGATCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: TEGEFLQRKRIG*PSRCMWSWIQS Trigger: AGACTGGATCCACGACCACATACATCTAGAAGGCAAGCCGATTCTTTTCCTTTGGAGAAATTCTCCTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000041621.5 ENSMUST00000128085.2 ENSMUST00000142670.2 ENSMUST00000144440.2 |
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| CDS CAA 72 bp | ACATTCGTTAGCAGGGTGGTTTCAACGGGGCAGAATTaGCTGCCGATGAAACTTGAGTTTAATTTCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: TFVSRVVSTGQN*LPMKLEFNFSP Trigger: AGGTGAGAAATTAAACTCAAGTTTCATCGGCAGCAAATTCTGCCCCGTTGAAACCACCCTGCTAACGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041621.5 |
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