Pregenerated sensors for LIPK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024771Ensembl transcript IDs: ENSMUST00000054260.8, ENSMUST00000224738.2, ENSMUST00000225505.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGGTTGCAAATCCAGTTATTGGCAGATGCAATTAAGCCATGCTaGAGATACACAACTGCCTTCGGAGCTGTTTTCCTTGAGCATCCT | + |
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Preference number: 1 (lower is better) Translates to: GRLQIQLLADAIKPC*RYTTAFGAVFLEHP Trigger: AGGATGCTCAAGGAAAACAGCTCCGAAGGCAGTTGTGTATCTGCAGCATGGCTTAATTGCATCTGCCAATAACTGGATTTGCAACCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR CCA 90 bp | CTTGTGGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTaGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACT | + |
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Preference number: 1 (lower is better) Translates to: LVDVDGLKVLSLVGY*PEIILSSEKPSTVT Trigger: AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCCACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR CCA 90 bp | ACACGTCATAACCACTATCGGCCAGAAGGAAAGCCAAGCTGTTGTTaGGCAGGTTGCAAATCCAGTTATTGGCAGATGCAATTAAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: TRHNHYRPEGKPSCC*AGCKSSYWQMQLSH Trigger: ATGGCTTAATTGCATCTGCCAATAACTGGATTTGCAACCTGCCCAACAACAGCTTGGCTTTCCTTCTGGCCGATAGTGGTTATGACGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR TCA 90 bp | GGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTCAGCTCTaGGAAACCATCCACTGTCACTTGCTATGTGAACTTCCTCATTAC | + |
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Preference number: 1 (lower is better) Translates to: GLESCWLLARDHPQL*ETIHCHLLCELPHY Trigger: GTAATGAGGAAGTTCACATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR TCA 90 bp | TGGGGATCAAATCCACTTAGAGAAAACAGGAAGTTGCTGCATAGCTaGTGGAATAACTTCCGGTTGCACACTTTGGTAGCGATGAATTGT | + |
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Preference number: 1 (lower is better) Translates to: WGSNPLRENRKLLHS*WNNFRLHTLVAMNC Trigger: ACAATTCATCGCTACCAAAGTGTGCAACCGGAAGTTATTCCATCAGCTATGCAGCAACTTCCTGTTTTCTCTAAGTGGATTTGATCCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR TCA 90 bp | CCAAGAACATTCAGTTCTCTTCCTCACATAAAAGAAGGGACAAGTTaGGAATTACTGAGGTGTCACTGTAGGGTCAGCCTCATTATAACT | + |
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Preference number: 1 (lower is better) Translates to: PRTFSSLPHIKEGTS*ELLRCHCRVSLIIT Trigger: AGTTATAATGAGGCTGACCCTACAGTGACACCTCAGTAATTCTCAACTTGTCCCTTCTTTTATGTGAGGAAGAGAACTGAATGTTCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCGGTGACAGTCTCAGGTaGTTTCTGGACCAGGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: MLYLEAPAPSITGCDPGCGDSLR*FLDQVF Trigger: AAACACCTGGTCCAGAAATCACCTGAGACTGTCACC...GCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTGGAGTTGACCAGAATTaGCAGCCTGGGCCCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VGYWPEIILSSEKPSTVTGVDQN*QPGPSA Trigger: TGCACTGGGCCCAGGCTGTCAATTCTGGTCAACTCC...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTGATCATCCTCAGCTCTaGGAAACCATCCACTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: FRNVGMLYLEAPAPSITGDHPQL*ETIHCH Trigger: GTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATC...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CCA 90 bp | GCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTAGTCTTGTTGGTTATTaGCCAGAGATCATCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ACYIWRPLPLQSQVVIQASLVGY*PEIILS Trigger: GCTGAGGATGATCTCTGGCCAATAACCAACAAGACT...AGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CCA 90 bp | TATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTTTCGGTCTTGAGTCTTGTTaGTTATTGGCCAGAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: YIWRPLPLQSQVVIQAAFGLESC*LLARDH Trigger: ATGATCTCTGGCCAATAACCAACAAGACTCAAGACC...GAAAGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR CAA 90 bp | TTAAGCCATGCTGCAGATACACAACTGCCTTCGGAGCTGTTTTCCTaGAGCATCCTTTCCCATGAGGAATCCGGTAAGTTCCAAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: LSHAADTQLPSELFS*SILSHEESGKFQGC Trigger: ACATCCTTGGAACTTACCGGATTCCTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCGAAGGCAGTTGTGTATCTGCAGCATGGCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR TCA 90 bp | TTATACACAGGAGGTGTAAGCTGGTTGAAGTGCATCATGTTCTGGTCAGGGTTGTCCTGCAGGACTCTGTaGCAGATAAACATCCAAGCG | + |
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Preference number: 2 (lower is better) Translates to: LYTGGVSWLKCIMFWSGLSCRTL*QINIQA Trigger: CGCTTGGATGTTTATCTGTCACAGAGTCCTGCAGGA...CAACCCTGACCAGAACATGATGCACTTCAACCAGCTTACACCTCCTGTGTATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR TCA 90 bp | GCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTAAGCTGTGGAAGAATTaGTTTTCTTGTGGATGTAGA | + |
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Preference number: 2 (lower is better) Translates to: ACYIWRPLPLQSQVVIQAKLWKN*FSCGCR Trigger: TCTACATCCACAAGAAAATCAATTCTTCCACAGCTT...AGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTAGTCTTGTTGGTTATTaGCCAGAGATCATCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: VGYWPEIILSSEKPSTVTSLVGY*PEIILS Trigger: GCTGAGGATGATCTCTGGCCAATAACCAACAAGACT...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CCA 90 bp | TTATGCTACTGTTTTGGAATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCGTCTCAGGTGATTTCTaGACCAGGTGTTTCCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: LCYCFGIQECRHVISGGPVSGDF*TRCFLG Trigger: GCCGAGGAAACACCTGGTCCAGAAATCACCTGAGAC...GGGGCCTCCAGATATAACATGCCTACATTCCTGAATTCCAAAACAGTAGCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR TCA 90 bp | TTATGCTACTGTTTTGGAATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCGATCATCCTCAGCTCTaGGAAACCATCCACTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LCYCFGIQECRHVISGGPDHPQL*ETIHCH Trigger: GTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATC...GGGGCCTCCAGATATAACATGCCTACATTCCTGAATTCCAAAACAGTAGCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAATAACTTCCGGTTGCACACTTTGGTAGCGATGAATTGTTCAAACCACGTGCACCAAACAATACCTTaGCAGCTTTCCTGGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: WNNFRLHTLVAMNCSNHVHQTIP*QLSWKG Trigger: CCCTTTCCAGGAAAGCTGTCAAGGTATTGTTTGGTG...CACGTGGTTTGAACAATTCATCGCTACCAAAGTGTGCAACCGGAAGTTATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR CCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGAAGCCAAGCTGTTGTTaGGCAGGTTGCAAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLKPSCC*AGCKSS Trigger: ACTGGATTTGCAACCTGCCCAACAACAGCTTGGCTT...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR CAA 90 bp | AGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTaGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTC | + |
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Preference number: 2 (lower is better) Translates to: RQSCGRIDFLVDVDG*KVLSLVGYWPEIIL Trigger: GAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATAAAGAAGGGACAAGTTaGGAATTACTGAGGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: GCRRVEGLESCWLLARDHKEGTS*ELLRCH Trigger: GTGACACCTCAGTAATTCTCAACTTGTCCCTTCTTT...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTAAAGAAGGGACAAGTTaGGAATTACTGAGGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LVIGQRSSSALRNHPLSLKEGTS*ELLRCH Trigger: GTGACACCTCAGTAATTCTCAACTTGTCCCTTCTTT...AAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTAAGCTGTGGAAGAATTaGTTTTCTTGTGGATGTAGA | + |
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Preference number: 2 (lower is better) Translates to: FRNVGMLYLEAPAPSITGKLWKN*FSCGCR Trigger: TCTACATCCACAAGAAAATCAATTCTTCCACAGCTT...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGTTCAATCACAGGTTGTaGTCCAGGCTGCTTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLFNHRL*SRLLSQ Trigger: TTGTGAAAGCAGCCTGGATCACAACCTGTGATTGAA...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTGGGGTGCGTCCTGTCCGAGGTAAAAATCCATATGATTGTAGTGTGGAAGAGAAAACAGGAAGTTaGTGCATAGCTGATGGAATA | + |
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Preference number: 2 (lower is better) Translates to: LPGVRPVRGKNPYDCSVEEKTGS*CIADGI Trigger: TATTCCATCAGCTATGCAGCAACTTCCTGTTTTCTC...TTCCACACTACAATCATATGGATTTTTACCTCGGACAGGACGCACCCCAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR CCA 90 bp | TTATACACAGGAGGTGTAAGCTGGTTGAAGTGCATCATGTTCTGGTCAGGGTTGGGTCTTGAGTCTTGTTaGTTATTGGCCAGAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: LYTGGVSWLKCIMFWSGLGLESC*LLARDH Trigger: ATGATCTCTGGCCAATAACCAACAAGACTCAAGACC...CAACCCTGACCAGAACATGATGCACTTCAACCAGCTTACACCTCCTGTGTATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTGTGGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCACTCCACATTGCTGTTaGGACACGCATCTTAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: FSCGCRRVEGLESCWLLATPHCC*DTHLRD Trigger: ATCTCTAAGATGCGTGTCCCAACAGCAATGTGGAGT...GGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCCACAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGAAAGAAGGGACAAGTTaGGAATTACTGAGGTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLKEGTS*ELLRCH Trigger: GTGACACCTCAGTAATTCTCAACTTGTCCCTTCTTT...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGATAAACATCCAAGCGACTCATGTTTAAGTTTTGGGGATCAAATCCACTTACGGAGCTGTTTTCCTTaGGCATCCTTTCCCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: TDKHPSDSCLSFGDQIHLRSCFP*ASFPMR Trigger: CCTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCG...TAAGTGGATTTGATCCCCAAAACTTAAACATGAGTCGCTTGGATGTTTATCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTTGTCCACTTTTCTCTAAGATCAGATTGACTGTAGCTGGAAGATCATATGCAATTAAGCCATGCTaGAGATACACAACTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: CFCPLFSKIRLTVAGRSYAIKPC*RYTTAF Trigger: GAAGGCAGTTGTGTATCTGCAGCATGGCTTAATTGC...ATATGATCTTCCAGCTACAGTCAATCTGATCTTAGAGAAAAGTGGACAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAATTCAATCACAGGTTGTaGTCCAGGCTGCTTTCACAA | + |
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Preference number: 2 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKFNHRL*SRLLSQ Trigger: TTGTGAAAGCAGCCTGGATCACAACCTGTGATTGAA...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAGATGCAATTAAGCCATaGTGCAGATACACAACTGCC | + |
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Preference number: 2 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKDAIKP*CRYTTA Trigger: GGCAGTTGTGTATCTGCAGCATGGCTTAATTGCATC...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAGGTCTTGAGTCTTGTTaGTTATTGGCCAGAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKGLESC*LLARDH Trigger: ATGATCTCTGGCCAATAACCAACAAGACTCAAGACC...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAAAGCTGTGGAAGAATTaGTTTTCTTGTGGATGTAGA | + |
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Preference number: 2 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKKLWKN*FSCGCR Trigger: TCTACATCCACAAGAAAATCAATTCTTCCACAGCTT...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CAA 90 bp | ATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCAAAGCCAAGCTGTTGTaGGGCAGGTTGCAAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: MLYLEAPAPSITGCDPGCKAKLL*GRLQIQ Trigger: CTGGATTTGCAACCTGCCCAACAACAGCTTGGCTTT...GCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTGAGTCTTGTTGGTTATaGGCCAGAGATCATCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: CYIWRPLPLQSQVVIQAAESCWL*ARDHPQ Trigger: CTGAGGATGATCTCTGGCCAATAACCAACAAGACTC...AGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTGTCCTCCACTCCACATaGCTGTTGGGACACGCATCT | + |
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Preference number: 3 (lower is better) Translates to: VGYWPEIILSSEKPSTVTVLHST*LLGHAS Trigger: AGATGCGTGTCCCAACAGCAATGTGGAGTGGAGGAC...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR GCA 72 bp | CCTAATCTTTTTAGCCAGCTCTGGATTCGTAGAGAATaGTATGAACGCTATGGTGGTGCCCTGCGAGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PNLFSQLWIRRE*YERYGGALRVA Trigger: GGCCACTCGCAGGGCACCACCATAGCGTTCATAGCATTCTCTACGAATCCAGAGCTGGCTAAAAAGATTAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR TCA 72 bp | ATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTaGTCCAGGCTGCTTTCACAAATGAATAGGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: ISGGPCPFNHRL*SRLLSQMNRLP Trigger: AGGAAGCCTATTCATTTGTGAAAGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR CCA 72 bp | TGCCACAACATCCTGTCCTCCACTCCACATTGCTGTTaGGACACGCATCTTAGAGATGTTATACACAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: CHNILSSTPHCC*DTHLRDVIHRR Trigger: CCTCCTGTGTATAACATCTCTAAGATGCGTGTCCCAACAGCAATGTGGAGTGGAGGACAGGATGTTGTGGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR-3UTR CAA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTGAGTCTTGTTGGTTATaGGCCAGAGATCATCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FRNVGMLYLEAPAPSITGESCWL*ARDHPQ Trigger: CTGAGGATGATCTCTGGCCAATAACCAACAAGACTC...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGGACGGGTTGAAGGTCTaGAGTCTTGTTGGTTATTGG | + |
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Preference number: 3 (lower is better) Translates to: IQECRHVISGGPCPFNHRDGLKV*SLVGYW Trigger: CCAATAACCAACAAGACTCAAGACCTTCAACCCGTC...CCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| 3UTR-3UTR CAA 90 bp | AGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTCAGTCGGAGCTGTTTTCCTaGAGCATCCTTTCCCATGAG | + |
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Preference number: 3 (lower is better) Translates to: RRVEGLESCWLLARDHPQSELFS*SILSHE Trigger: CTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCGA...CTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| 3UTR CCA 72 bp | GTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTaGCCAGAGATCATCCTCAGCTCTGAGAAACCATCC | + |
|
Preference number: 3 (lower is better) Translates to: VDGLKVLSLVGY*PEIILSSEKPS Trigger: GGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR CCA 72 bp | AACCACTATCGGCCAGAAGGAAAGCCAAGCTGTTGTTaGGCAGGTTGCAAATCCAGTTATTGGCAGATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NHYRPEGKPSCC*AGCKSSYWQMQ Trigger: TTGCATCTGCCAATAACTGGATTTGCAACCTGCCCAACAACAGCTTGGCTTTCCTTCTGGCCGATAGTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTTCTCTAAGATCAGATaGACTGTAGCTGGAAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: MLYLEAPAPSITGCDPGCFSKIR*TVAGRS Trigger: TGATCTTCCAGCTACAGTCAATCTGATCTTAGAGAA...GCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTGGCATCTGTCAACTTaGCAAAATGCTGTAGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: IQECRHVISGGPCPFNHRWHLST*QNAVDY Trigger: GTAGTCTACAGCATTTTGCAAAGTTGACAGATGCCA...CCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR GCA 72 bp | GAGATGTTATACACAGGAGGTGTAAGCTGGTTGAAGTaGATCATGTTCTGGTCAGGGTTGCCCCAGTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EMLYTGGVSWLK*IMFWSGLPQSK Trigger: TTTTGACTGGGGCAACCCTGACCAGAACATGATGCACTTCAACCAGCTTACACCTCCTGTGTATAACATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGGCATCTGTCAACTTaGCAAAATGCTGTAGACTAC | + |
|
Preference number: 3 (lower is better) Translates to: VGYWPEIILSSEKPSTVTWHLST*QNAVDY Trigger: GTAGTCTACAGCATTTTGCAAAGTTGACAGATGCCA...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTCAGCCTCATTACATCTGTTaGTCTCAAGCCAATAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RRVEGLESCWLLARDHPQPHYIC*SQANRS Trigger: ACTTCTATTGGCTTGAGACAAACAGATGTAATGAGG...CTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCTCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACACCATCCACTGTCACTaGCTATGTGAACTTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ASSLRQSCGRIDFLVDVDTIHCH*LCELPH Trigger: ATGAGGAAGTTCACATAGCAAGTGACAGTGGATGGT...GTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGAGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR TCA 72 bp | TTCAGTTCTCTTCCTCACATAAAAGAAGGGACAAGTTaGGAATTACTGAGGTGTCACTGTAGGGTCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSSLPHIKEGTS*ELLRCHCRVSL Trigger: GAGGCTGACCCTACAGTGACACCTCAGTAATTCTCAACTTGTCCCTTCTTTTATGTGAGGAAGAGAACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR TCA 72 bp | TCTTGTTGGTTATTGGCCAGAGATCATCCTCAGCTCTaGGAAACCATCCACTGTCACTTGCTATGTGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: SCWLLARDHPQL*ETIHCHLLCEL Trigger: AAGTTCACATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR TCA 72 bp | ATAGGCTTCCTCACTCAGGCAAAGCTGTGGAAGAATTaGTTTTCTTGTGGATGTAGACGGGTTGAAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: IGFLTQAKLWKN*FSCGCRRVEGL Trigger: AAGACCTTCAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGAGGAAGCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR TCA 72 bp | AATCCACTTAGAGAAAACAGGAAGTTGCTGCATAGCTaGTGGAATAACTTCCGGTTGCACACTTTGGTAGCG | + |
|
Preference number: 3 (lower is better) Translates to: NPLRENRKLLHS*WNNFRLHTLVA Trigger: CGCTACCAAAGTGTGCAACCGGAAGTTATTCCATCAGCTATGCAGCAACTTCCTGTTTTCTCTAAGTGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR GCA 72 bp | CTAGCCAGGGGTATGGCATCTGTCAACTTTGCAAAATaGTGTAGACTACCAAGAACATTCAGTTCTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LARGMASVNFAK*CRLPRTFSSLP Trigger: AGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAAGTTGACAGATGCCATACCCCTGGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR GCA 72 bp | CAAATCCAGTTATTGGCAGATGCAATTAAGCCATGCTaGAGATACACAACTGCCTTCGGAGCTGTTTTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: QIQLLADAIKPC*RYTTAFGAVFL Trigger: AAGGAAAACAGCTCCGAAGGCAGTTGTGTATCTGCAGCATGGCTTAATTGCATCTGCCAATAACTGGATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR GCA 72 bp | TTGCAAATCCAGTTATTGGCAGATGCAATTAAGCCATaGTGCAGATACACAACTGCCTTCGGAGCTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LQIQLLADAIKP*CRYTTAFGAVF Trigger: GAAAACAGCTCCGAAGGCAGTTGTGTATCTGCAGCATGGCTTAATTGCATCTGCCAATAACTGGATTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR GCA 72 bp | GGGGATCAAATCCACTTAGAGAAAACAGGAAGTTGCTaGATAGCTGATGGAATAACTTCCGGTTGCACACTT | + |
|
Preference number: 3 (lower is better) Translates to: GDQIHLEKTGSC*IADGITSGCTL Trigger: AAGTGTGCAACCGGAAGTTATTCCATCAGCTATGCAGCAACTTCCTGTTTTCTCTAAGTGGATTTGATCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATACACAGGAGGTGTAAGCTGGTTGAAGTGCATCATGTTCTGGTCAGGGTTGAAAAGAAGGGACAAGTaGAGAATTACTGAGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LYTGGVSWLKCIMFWSGLKRRDK*RITEVS Trigger: TGACACCTCAGTAATTCTCAACTTGTCCCTTCTTTT...CAACCCTGACCAGAACATGATGCACTTCAACCAGCTTACACCTCCTGTGTATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR TCA 72 bp | TCAGCTCTGAGAAACCATCCACTGTCACTTGCTATGTaGACTTCCTCATTACATCTGTTTGTCTCAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SALRNHPLSLAM*TSSLHLFVSSQ Trigger: TTGGCTTGAGACAAACAGATGTAATGAGGAAGTTCACATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR GCA 72 bp | ATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTaGTATGTGAACTTCCTCATTACATCTGTTTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IILSSEKPSTVT*YVNFLITSVCL Trigger: GAGACAAACAGATGTAATGAGGAAGTTCACATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR-3UTR CAA 90 bp | TTATGCTACTGTTTTGGAATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTTGCAAATCCAGTTATaGGCAGATGCAATTAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LCYCFGIQECRHVISGGPLQIQL*ADAIKP Trigger: TGGCTTAATTGCATCTGCCAATAACTGGATTTGCAA...GGGGCCTCCAGATATAACATGCCTACATTCCTGAATTCCAAAACAGTAGCATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGATAAACATCCAAGCGACTCATGTTTAAGTTTTGGGGATCAAATCCACTTATGGAATAACTTCCGGTaGCACACTTTGGTAGCGATG | + |
|
Preference number: 3 (lower is better) Translates to: TDKHPSDSCLSFGDQIHLWNNFR*HTLVAM Trigger: CATCGCTACCAAAGTGTGCAACCGGAAGTTATTCCA...TAAGTGGATTTGATCCCCAAAACTTAAACATGAGTCGCTTGGATGTTTATCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGATAAACATCCAAGCGACTCATGTTTAAGTTTTGGGGATCAAATCCACTTAGCCCACATAGAAGAGTaGCTTTTGTCCACTTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TDKHPSDSCLSFGDQIHLAHIEE*LLSTFL Trigger: GAGAAAAGTGGACAAAAGCAACTCTTCTATGTGGGC...TAAGTGGATTTGATCCCCAAAACTTAAACATGAGTCGCTTGGATGTTTATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAACCATCCACTGTCACTaGCTATGTGAACTTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKTIHCH*LCELPH Trigger: ATGAGGAAGTTCACATAGCAAGTGACAGTGGATGGT...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR-3UTR CAA 90 bp | CATTACATCTGTTTGTCTCAAGCCAATAGAAGTAGCTCTTGCCTTAGAATTCTTAAAAGAAGGGACAAGTaGAGAATTACTGAGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: HYICLSQANRSSSCLRILKRRDK*RITEVS Trigger: TGACACCTCAGTAATTCTCAACTTGTCCCTTCTTTT...AAGAATTCTAAGGCAAGAGCTACTTCTATTGGCTTGAGACAAACAGATGTAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAAAAAGAAGGGACAAGTaGAGAATTACTGAGGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKKRRDK*RITEVS Trigger: TGACACCTCAGTAATTCTCAACTTGTCCCTTCTTTT...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 37% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAACCTCATTACATCTGTTaGTCTCAAGCCAATAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKPHYIC*SQANRS Trigger: ACTTCTATTGGCTTGAGACAAACAGATGTAATGAGG...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTCGGAGCTGTTTTCCTTaGGCATCCTTTCCCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CYIWRPLPLQSQVVIQAARSCFP*ASFPMR Trigger: CCTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCG...AGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | ATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTCCTCCACTCCACATTaGTGTTGGGACACGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLYLEAPAPSITGCDPGCSSTPH*CWDTHL Trigger: AAGATGCGTGTCCCAACAGCAATGTGGAGTGGAGGA...GCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCATCTCGTCCCAGCTaGAGGCCCAATATTGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GCRRVEGLESCWLLARDHPSRPS*RPNIAV Trigger: CACCGCAATATTGGGCCTTCAGCTGGGACGAGATGG...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTCCATCTCGTCCCAGCTaGAGGCCCAATATTGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVIGQRSSSALRNHPLSLPSRPS*RPNIAV Trigger: CACCGCAATATTGGGCCTTCAGCTGGGACGAGATGG...AAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATGGAGTTGACCAGAATTaGCAGCCTGGGCCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCRRVEGLESCWLLARDHGVDQN*QPGPSA Trigger: TGCACTGGGCCCAGGCTGTCAATTCTGGTCAACTCC...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGGTCTCAGGTGATTTCTaGACCAGGTGTTTCCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQECRHVISGGPCPFNHRVSGDF*TRCFLG Trigger: GCCGAGGAAACACCTGGTCCAGAAATCACCTGAGAC...CCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | TATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTTTCGATGCAATTAAGCCATaGTGCAGATACACAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YIWRPLPLQSQVVIQAAFDAIKP*CRYTTA Trigger: GGCAGTTGTGTATCTGCAGCATGGCTTAATTGCATC...GAAAGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| 3UTR CAA 72 bp | GCTGCAGATACACAACTGCCTTCGGAGCTGTTTTCCTaGAGCATCCTTTCCCATGAGGAATCCGGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AADTQLPSELFS*SILSHEESGKF Trigger: GAACTTACCGGATTCCTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCGAAGGCAGTTGTGTATCTGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTCACCAAACAATACCTTaGCAGCTTTCCTGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRNVGMLYLEAPAPSITGHQTIP*QLSWKG Trigger: CCCTTTCCAGGAAAGCTGTCAAGGTATTGTTTGGTG...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | AGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTCAGCAGTGCAGCATGTTCTaGACAGATGTTCCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRVEGLESCWLLARDHPQQCSMF*TDVPAG Trigger: TCCTGCAGGAACATCTGTTCAGAACATGCTGCACTG...CTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTCAAAAGCTTGGAGTTaGCCAGAATTGACAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRNVGMLYLEAPAPSITGSKAWS*PELTAW Trigger: CCAGGCTGTCAATTCTGGTCAACTCCAAGCTTTTGA...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTAAGCCAAGCTGTTGTTaGGCAGGTTGCAAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRNVGMLYLEAPAPSITGKPSCC*AGCKSS Trigger: ACTGGATTTGCAACCTGCCCAACAACAGCTTGGCTT...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTCAAACCACGTGTGAGTaGAGAACATTTTGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CYIWRPLPLQSQVVIQAAQTTCE*RTFCHQ Trigger: TTGGTGACAAAATGTTCTCCACTCACACGTGGTTTG...AGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATGGTGACAGTCTCAGGTaGTTTCTGGACCAGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GCRRVEGLESCWLLARDHGDSLR*FLDQVF Trigger: AAACACCTGGTCCAGAAATCACCTGAGACTGTCACC...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGCTATGGTGACAGTCTCAGGTaGTTTCTGGACCAGGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YWPEIILSSEKPSTVTCYGDSLR*FLDQVF Trigger: AAACACCTGGTCCAGAAATCACCTGAGACTGTCACC...ATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGCTATCAGTGCAGCATGTTCTaGACAGATGTTCCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YWPEIILSSEKPSTVTCYQCSMF*TDVPAG Trigger: TCCTGCAGGAACATCTGTTCAGAACATGCTGCACTG...ATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTGCAATTAAGCCATGCTaGAGATACACAACTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRNVGMLYLEAPAPSITGAIKPC*RYTTAF Trigger: GAAGGCAGTTGTGTATCTGCAGCATGGCTTAATTGC...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTCTTTTTAGCCAGCTCTaGATTCGTAGAGAATGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: CYIWRPLPLQSQVVIQAALFSQL*IRRECY Trigger: ATAGCATTCTCTACGAATCCAGAGCTGGCTAAAAAG...AGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGCTATAAGTGCATCATGTTCTaGTCAGGGTTGCCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YWPEIILSSEKPSTVTCYKCIMF*SGLPQS Trigger: TGACTGGGGCAACCCTGACCAGAACATGATGCACTT...ATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TTATGCTACTGTTTTGGAATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCCGGAGCTGTTTTCCTTaGGCATCCTTTCCCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCYCFGIQECRHVISGGPRSCFP*ASFPMR Trigger: CCTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCG...GGGGCCTCCAGATATAACATGCCTACATTCCTGAATTCCAAAACAGTAGCATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGTCCTGCAGGACTCTGTaGCAGATAAACATCCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLSCRTL*QINIQA Trigger: CGCTTGGATGTTTATCTGTCACAGAGTCCTGCAGGA...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | TGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTAAAACAGGAAGTTGCTaGATAGCTGATGGAATAACT | + |
|
Preference number: 4 (lower is better) Translates to: CYIWRPLPLQSQVVIQAAKTGSC*IADGIT Trigger: AGTTATTCCATCAGCTATGCAGCAACTTCCTGTTTT...AGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGAAGTGCATCATGTTCTaGTCAGGGTTGCCCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLKCIMF*SGLPQS Trigger: TGACTGGGGCAACCCTGACCAGAACATGATGCACTT...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTACTCCACATTGCTGTTaGGACACGCATCTTAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VGYWPEIILSSEKPSTVTTPHCC*DTHLRD Trigger: ATCTCTAAGATGCGTGTCCCAACAGCAATGTGGAGT...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | AGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTCAGACTCCACATTGCTGTTaGGACACGCATCTTAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRVEGLESCWLLARDHPQTPHCC*DTHLRD Trigger: ATCTCTAAGATGCGTGTCCCAACAGCAATGTGGAGT...CTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGGCTTCAGGATTTGTaGTGCTTTCTTGCTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGYWPEIILSSEKPSTVTWLQDL*CFLAYS Trigger: GCTATAAGCAAGAAAGCATCACAAATCCTGAAGCCA...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTGTGGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCCACCAAACAATACCTTaGCAGCTTTCCTGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSCGCRRVEGLESCWLLAHQTIP*QLSWKG Trigger: CCCTTTCCAGGAAAGCTGTCAAGGTATTGTTTGGTG...GGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCCACAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGTCAAAAGCTTGGAGTTaGCCAGAATTGACAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLSKAWS*PELTAW Trigger: CCAGGCTGTCAATTCTGGTCAACTCCAAGCTTTTGA...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTGAGAAAACAGGAAGTTaGTGCATAGCTGATGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: FRNVGMLYLEAPAPSITGEKTGS*CIADGI Trigger: TATTCCATCAGCTATGCAGCAACTTCCTGTTTTCTC...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATTGTTCAAACCACGTGTaGGTGGAGAACATTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCRRVEGLESCWLLARDHCSNHV*VENILS Trigger: TGACAAAATGTTCTCCACTCACACGTGGTTTGAACA...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTGAGAAAACAGGAAGTTaGTGCATAGCTGATGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: VGYWPEIILSSEKPSTVTEKTGS*CIADGI Trigger: TATTCCATCAGCTATGCAGCAACTTCCTGTTTTCTC...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGTGTTCAAACCACGTGTaGGTGGAGAACATTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLCSNHV*VENILS Trigger: TGACAAAATGTTCTCCACTCACACGTGGTTTGAACA...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | TTATGCTACTGTTTTGGAATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCGATGCAATTAAGCCATaGTGCAGATACACAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LCYCFGIQECRHVISGGPDAIKP*CRYTTA Trigger: GGCAGTTGTGTATCTGCAGCATGGCTTAATTGCATC...GGGGCCTCCAGATATAACATGCCTACATTCCTGAATTCCAAAACAGTAGCATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | AAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAGAAGGGTCCTCCACTCCACATTaGTGTTGGGACACGCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: KCCRLPRTFSSLPHIKEGSSTPH*CWDTHL Trigger: AAGATGCGTGTCCCAACAGCAATGTGGAGTGGAGGA...CCCTTCTTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| 3UTR CAA 72 bp | TGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTaGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGRIDFLVDVDG*KVLSLVGYWPE Trigger: CTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | CATTACATCTGTTTGTCTCAAGCCAATAGAAGTAGCTCTTGCCTTAGAATTCTTTCCTGCAGGACTCTGTaGCAGATAAACATCCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: HYICLSQANRSSSCLRILSCRTL*QINIQA Trigger: CGCTTGGATGTTTATCTGTCACAGAGTCCTGCAGGA...AAGAATTCTAAGGCAAGAGCTACTTCTATTGGCTTGAGACAAACAGATGTAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTTGCAAATCCAGTTATTaGCAGATGCAATTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVIGQRSSSALRNHPLSLCKSSY*QMQLSH Trigger: ATGGCTTAATTGCATCTGCCAATAACTGGATTTGCA...AAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTCTCATGTTTAAGTTTTaGGGATCAAATCCACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGYWPEIILSSEKPSTVTLMFKF*GSNPLR Trigger: TCTAAGTGGATTTGATCCCCAAAACTTAAACATGAG...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | AGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTCAGCATATGATTGTAGTGTaGAATCTCCTTGTAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRVEGLESCWLLARDHPQHMIVV*NLLVVD Trigger: ATCTACTACAAGGAGATTCCACACTACAATCATATG...CTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | CATTACATCTGTTTGTCTCAAGCCAATAGAAGTAGCTCTTGCCTTAGAATTCTTAAGCCAAGCTGTTGTTaGGCAGGTTGCAAATCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HYICLSQANRSSSCLRILKPSCC*AGCKSS Trigger: ACTGGATTTGCAACCTGCCCAACAACAGCTTGGCTT...AAGAATTCTAAGGCAAGAGCTACTTCTATTGGCTTGAGACAAACAGATGTAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCAAGACATCCACCTGCTTACAAAAGTAGAGTGCCTTTAATTTTGCAAAGATGGCTTCAGGATTTGTaGTGCTTTCTTGCTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TARHPPAYKSRVPLILQRWLQDL*CFLAYS Trigger: GCTATAAGCAAGAAAGCATCACAAATCCTGAAGCCA...TCTTTGCAAAATTAAAGGCACTCTACTTTTGTAAGCAGGTGGATGTCTTGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| CDS-3UTR CCA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGCTCATGTTTAAGTTTTaGGGATCAAATCCACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLLMFKF*GSNPLR Trigger: TCTAAGTGGATTTGATCCCCAAAACTTAAACATGAG...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTGTGGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCCATATGATTGTAGTGTaGAATCTCCTTGTAGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSCGCRRVEGLESCWLLAHMIVV*NLLVVD Trigger: ATCTACTACAAGGAGATTCCACACTACAATCATATG...GGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCCACAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR GCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAGCAATTAAGCCATGCTaGAGATACACAACTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKAIKPC*RYTTAF Trigger: GAAGGCAGTTGTGTATCTGCAGCATGGCTTAATTGC...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR TCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAATGGCTTCAGGATTTGTaGTGCTTTCTTGCTTATAGC | + |
|
Preference number: 4 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKWLQDL*CFLAYS Trigger: GCTATAAGCAAGAAAGCATCACAAATCCTGAAGCCA...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAACAAACCACGTGTGAGTaGAGAACATTTTGTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKQTTCE*RTFCHQ Trigger: TTGGTGACAAAATGTTCTCCACTCACACGTGGTTTG...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CCA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAATGCAAATCCAGTTATTaGCAGATGCAATTAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKCKSSY*QMQLSH Trigger: ATGGCTTAATTGCATCTGCCAATAACTGGATTTGCA...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTGTCCTCCACTCCACATaGCTGTTGGGACACGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FRNVGMLYLEAPAPSITGVLHST*LLGHAS Trigger: AGATGCGTGTCCCAACAGCAATGTGGAGTGGAGGAC...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | ATTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTCGGAGCTGTTTTCCTaGAGCATCCTTTCCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: IQECRHVISGGPCPFNHRSELFS*SILSHE Trigger: CTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCGA...CCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | AGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATCCTCAGGGAGGTGTAAGCTGGTaGAAGTGCATCATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRVEGLESCWLLARDHPQGGVSW*KCIMFW Trigger: CCAGAACATGATGCACTTCAACCAGCTTACACCTCC...CTGAGGATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGGTCCTCCACTCCACATaGCTGTTGGGACACGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLVLHST*LLGHAS Trigger: AGATGCGTGTCCCAACAGCAATGTGGAGTGGAGGAC...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTGTGATCCAGGCTGCTATTTGTGATGCTTTCTaGCTTATAGCCATCTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: CYIWRPLPLQSQVVIQAAICDAF*LIAIYG Trigger: CCCATAGATGGCTATAAGCAAGAAAGCATCACAAAT...AGCAGCCTGGATCACAACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATTCGGAGCTGTTTTCCTaGAGCATCCTTTCCCATGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCRRVEGLESCWLLARDHSELFS*SILSHE Trigger: CTCATGGGAAAGGATGCTCAAGGAAAACAGCTCCGA...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTAAAGCCAAGCTGTTGTaGGGCAGGTTGCAAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LVIGQRSSSALRNHPLSLKAKLL*GRLQIQ Trigger: CTGGATTTGCAACCTGCCCAACAACAGCTTGGCTTT...AAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGCTATGGAGGTGTAAGCTGGTaGAAGTGCATCATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YWPEIILSSEKPSTVTCYGGVSW*KCIMFW Trigger: CCAGAACATGATGCACTTCAACCAGCTTACACCTCC...ATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTGAAGCACACAACATGTaGTTGCTAAAAGCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: VGYWPEIILSSEKPSTVTEAHNM*LLKATT Trigger: TGTGGTGGCTTTTAGCAACAACATGTTGTGTGCTTC...AGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACGGGTTGAAAGCCAAGCTGTTGTaGGGCAGGTTGCAAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLRQSCGRIDFLVDVDGLKAKLL*GRLQIQ Trigger: CTGGATTTGCAACCTGCCCAACAACAGCTTGGCTTT...CAACCCGTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGGAATGTAGGCATGTTATATCTGGAGGCCCCTGCCCCTTCAATCACAGGTTTGCAAATCCAGTTATaGGCAGATGCAATTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRNVGMLYLEAPAPSITGLQIQL*ADAIKP Trigger: TGGCTTAATTGCATCTGCCAATAACTGGATTTGCAA...ACCTGTGATTGAAGGGGCAGGGGCCTCCAGATATAACATGCCTACATTCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTTATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGCCCACATAGAAGAGTaGCTTTTGTCCACTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVIGQRSSSALRNHPLSLAHIEE*LLSTFL Trigger: GAGAAAAGTGGACAAAAGCAACTCTTCTATGTGGGC...AAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATGCCCACATAGAAGAGTaGCTTTTGTCCACTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GCRRVEGLESCWLLARDHAHIEE*LLSTFL Trigger: GAGAAAAGTGGACAAAAGCAACTCTTCTATGTGGGC...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTGTGGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCTGGAATAACTTCCGGTaGCACACTTTGGTAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSCGCRRVEGLESCWLLAWNNFR*HTLVAM Trigger: CATCGCTACCAAAGTGTGCAACCGGAAGTTATTCCA...GGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCCACAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGGGGTGCGTCCTGTCCGAGGTAAAAATCCATATGATTGTAGTGTGGAAATTTGTGATGCTTTCTaGCTTATAGCCATCTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGVRPVRGKNPYDCSVEICDAF*LIAIYG Trigger: CCCATAGATGGCTATAAGCAAGAAAGCATCACAAAT...TTCCACACTACAATCATATGGATTTTTACCTCGGACAGGACGCACCCCAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
||
| CDS-3UTR CAA 90 bp | TATTGGCCAGAGATCATCCTCAGCTCTGAGAAACCATCCACTGTCACTTGCTATTTCTCTAAGATCAGATaGACTGTAGCTGGAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: YWPEIILSSEKPSTVTCYFSKIR*TVAGRS Trigger: TGATCTTCCAGCTACAGTCAATCTGATCTTAGAGAA...ATAGCAAGTGACAGTGGATGGTTTCTCAGAGCTGAGGATGATCTCTGGCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
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| CDS-3UTR CAA 90 bp | GGATGTAGACGGGTTGAAGGTCTTGAGTCTTGTTGGTTATTGGCCAGAGATCATTTCTCTAAGATCAGATaGACTGTAGCTGGAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: GCRRVEGLESCWLLARDHFSKIR*TVAGRS Trigger: TGATCTTCCAGCTACAGTCAATCTGATCTTAGAGAA...ATGATCTCTGGCCAATAACCAACAAGACTCAAGACCTTCAACCCGTCTACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
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| CDS-3UTR CAA 90 bp | GCTTCCTCACTCAGGCAAAGCTGTGGAAGAATTGATTTTCTTGTGGATGTAGACTTGCAAATCCAGTTATaGGCAGATGCAATTAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: ASSLRQSCGRIDFLVDVDLQIQL*ADAIKP Trigger: TGGCTTAATTGCATCTGCCAATAACTGGATTTGCAA...GTCTACATCCACAAGAAAATCAATTCTTCCACAGCTTTGCCTGAGTGAGGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
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| CDS-3UTR CAA 90 bp | CATTACATCTGTTTGTCTCAAGCCAATAGAAGTAGCTCTTGCCTTAGAATTCTTTGGAATAACTTCCGGTaGCACACTTTGGTAGCGATG | + |
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Preference number: 5 (lower is better) Translates to: HYICLSQANRSSSCLRILWNNFR*HTLVAM Trigger: CATCGCTACCAAAGTGTGCAACCGGAAGTTATTCCA...AAGAATTCTAAGGCAAGAGCTACTTCTATTGGCTTGAGACAAACAGATGTAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054260.8 ENSMUST00000225505.2 |
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| CDS-3UTR CAA 90 bp | TGCTTTTGTCCACTTTTCTCTAAGATCAGATTGACTGTAGCTGGAAGATCATATGAAGCACACAACATGTaGTTGCTAAAAGCCACCACA | + |
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Preference number: 5 (lower is better) Translates to: CFCPLFSKIRLTVAGRSYEAHNM*LLKATT Trigger: TGTGGTGGCTTTTAGCAACAACATGTTGTGTGCTTC...ATATGATCTTCCAGCTACAGTCAATCTGATCTTAGAGAAAAGTGGACAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| CDS-3UTR CAA 90 bp | TTTGCAAAATGCTGTAGACTACCAAGAACATTCAGTTCTCTTCCTCACATAAAAGAAGCACACAACATGTaGTTGCTAAAAGCCACCACA | + |
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Preference number: 5 (lower is better) Translates to: FAKCCRLPRTFSSLPHIKEAHNM*LLKATT Trigger: TGTGGTGGCTTTTAGCAACAACATGTTGTGTGCTTC...TTTTATGTGAGGAAGAGAACTGAATGTTCTTGGTAGTCTACAGCATTTTGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| CDS-3UTR CAA 90 bp | TGCTTTTGTCCACTTTTCTCTAAGATCAGATTGACTGTAGCTGGAAGATCATATCCAGCAATATTCATATaGGCTTCAGGATTTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: CFCPLFSKIRLTVAGRSYPAIFI*ASGFVM Trigger: CATCACAAATCCTGAAGCCAATATGAATATTGCTGG...ATATGATCTTCCAGCTACAGTCAATCTGATCTTAGAGAAAAGTGGACAAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224738.2 |
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| CDS CAA 72 bp | AATATTCATATTGGCTTCAGGATTTGTGATGCTTTCTaGCTTATAGCCATCTATGGGTCCGGAAAGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: NIHIGFRICDAF*LIAIYGSGKKH Trigger: GTGCTTCTTTCCGGACCCATAGATGGCTATAAGCAAGAAAGCATCACAAATCCTGAAGCCAATATGAATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054260.8 ENSMUST00000224738.2 ENSMUST00000225505.2 |
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| CDS CAA 90 bp | AACACATACAATATTCATATTGGCTTCAGGATTTGTGATGCTTTCTaGCTTATAGCCATCTATGGGTCCGGAAAGAAGCACACAACATGT | + |
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Preference number: 6 (lower is better) Translates to: NTYNIHIGFRICDAF*LIAIYGSGKKHTTC Trigger: ACATGTTGTGTGCTTCTTTCCGGACCCATAGATGGCTATAAGCAAGAAAGCATCACAAATCCTGAAGCCAATATGAATATTGTATGTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054260.8 |
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| CDS CAA 90 bp | AAGTTCACTAATATTCATATTGGCTTCAGGATTTGTGATGCTTTCTaGCTTATAGCCATCTATGGGTCCGGAAAGAAGCACACAACATGT | + |
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Preference number: 6 (lower is better) Translates to: KFTNIHIGFRICDAF*LIAIYGSGKKHTTC Trigger: ACATGTTGTGTGCTTCTTTCCGGACCCATAGATGGCTATAAGCAAGAAAGCATCACAAATCCTGAAGCCAATATGAATATTAGTGAACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225505.2 |
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