Pregenerated sensors for LIPH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044626Ensembl transcript IDs: ENSMUST00000060673.8, ENSMUST00000074230.12, ENSMUST00000231682.2, ENSMUST00000231766.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCACGGCCCTGAGGGTGTGGTATGACAGGCAGCAGATTCGACAGTaGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: PTALRVWYDRQQIRQ*GTSGASGRSQTKCF Trigger: AAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACACCCTCAGGGCCGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR GCA 90 bp | CCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTaGCCCACGGCCCTGAGGGTGTGGTATGACAGGCAGCAGATTCGA | + |
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Preference number: 1 (lower is better) Translates to: PPRWQRIGHRDHLDA*PTALRVWYDRQQIR Trigger: TCGAATCTGCTGCCTGTCATACCACACCCTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR CCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTaGTTCATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGG | + |
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Preference number: 1 (lower is better) Translates to: LHSLALPTHSPCEVV*FILHSVPAEMAEDW Trigger: CCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR GCA 90 bp | GTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTaGTGTAGGGAGCTGGGCTATTTCTGTCTTGCCCTAGTTAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: VGNKWGLGTQPDKVL*CRELGYFCLALVRA Trigger: CGCCCTAACTAGGGCAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR GCA 90 bp | ACATCTGCCTCCAGGGAGGCCTGGGAAGACTTCTCAGAGTTTCCATaGCCCAAGAGCCGGCCATGCTCTGAATCTGAGCCCCACAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: TSASREAWEDFSEFP*PKSRPCSESEPHKF Trigger: AAACTTGTGGGGCTCAGATTCAGAGCATGGCCGGCTCTTGGGGCATGGAAACTCTGAGAAGTCTTCCCAGGCCTCCCTGGAGGCAGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR CCA 90 bp | GGCCAGAGACCTCAGCTTCATCTGCAGGACCCTGAGCTTGTACTTTaGGCCCACTACAGACCCTGTGGAGAACAACAAGGAAATCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: GQRPQLHLQDPELVL*AHYRPCGEQQGNLC Trigger: GCAGAGATTTCCTTGTTGTTCTCCACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGAAGCTGAGGTCTCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR TCA 90 bp | AGTAGCCTACACGGGGACATGGCACAATTTGTCCAGCGCCACAGCTaGCACACTTGCCATTCCTATAATCCCGATAGGAGTCGCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: SSLHGDMAQFVQRHS*HTCHSYNPDRSRRD Trigger: ATCCCTGCGACTCCTATCGGGATTATAGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGACAAATTGTGCCATGTCCCCGTGTAGGCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR GCA 90 bp | GGAGTCGCAGGGATAGGCCGTGATGGAGCAGTTATTTTGCAGGGATaGAAGGTACAGGTAGACGGACATCTGGTGGTCACACTTGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: GVAGIGRDGAVILQG*KVQVDGHLVVTLEV Trigger: TACTTCAAGTGTGACCACCAGATGTCCGTCTACCTGTACCTTGCATCCCTGCAAAATAACTGCTCCATCACGGCCTATCCCTGCGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR CCA 90 bp | TGTTATTCAGAAATGTTTGAAGTCACATCTGCCTCCAGGGAGGCCTaGGAAGACTTCTCAGAGTTTCCATGCCCCAAGAGCCGGCCATGC | + |
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Preference number: 1 (lower is better) Translates to: CYSEMFEVTSASREA*EDFSEFPCPKSRPC Trigger: GCATGGCCGGCTCTTGGGGCATGGAAACTCTGAGAAGTCTTCCCAGGCCTCCCTGGAGGCAGATGTGACTTCAAACATTTCTGAATAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR CCA 90 bp | ATTCTCCATAAGGACGAGATCATATCGACACAAGTGAGGCCTGTCTaGATGGGCCAGAGACCTCAGCTTCATCTGCAGGACCCTGAGCTT | + |
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Preference number: 1 (lower is better) Translates to: ILHKDEIISTQVRPV*MGQRPQLHLQDPEL Trigger: AAGCTCAGGGTCCTGCAGATGAAGCTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTGTGTCGATATGATCTCGTCCTTATGGAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR TCA 90 bp | ACTTGCCATTCCTATAATCCCGATAGGAGTCGCAGGGATAGGCCGTaGTGGAGCAGTTATTTTGCAGGGATGCAAGGTACAGGTAGACGG | + |
|
Preference number: 1 (lower is better) Translates to: TCHSYNPDRSRRDRP*WSSYFAGMQGTGRR Trigger: CCGTCTACCTGTACCTTGCATCCCTGCAAAATAACTGCTCCATCACGGCCTATCCCTGCGACTCCTATCGGGATTATAGGAATGGCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR TCA 90 bp | GATGTCTCAACATTCTCCATAAGGACGAGATCATATCGACACAAGTaGGGCCTGTCTGGATGGGCCAGAGACCTCAGCTTCATCTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: DVSTFSIRTRSYRHK*GLSGWARDLSFICR Trigger: CCTGCAGATGAAGCTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTGTGTCGATATGATCTCGTCCTTATGGAGAATGTTGAGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR TCA 90 bp | GCAGGGATGCAAGGTACAGGTAGACGGACATCTGGTGGTCACACTTaGAGTACTTTATACCTCCAAATATTGTCTTGGGGCAACCGGGTT | + |
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Preference number: 1 (lower is better) Translates to: AGMQGTGRRTSGGHT*STLYLQILSWGNRV Trigger: AACCCGGTTGCCCCAAGACAATATTTGGAGGTATAAAGTACTTCAAGTGTGACCACCAGATGTCCGTCTACCTGTACCTTGCATCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR GCA 90 bp | CTTTGGGCCCACTACAGACCCTGTGGAGAACAACAAGGAAATCTCTaGCACCTTATCCAGATCTCGATTAAATCTTGCGAGGAGACTCAC | + |
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Preference number: 1 (lower is better) Translates to: LWAHYRPCGEQQGNL*HLIQISIKSCEETH Trigger: GTGAGTCTCCTCGCAAGATTTAATCGAGATCTGGATAAGGTGGCAGAGATTTCCTTGTTGTTCTCCACAGGGTCTGTAGTGGGCCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR TCA 90 bp | CTTCTTGTCGCCCCGAGGCAAACAGTCCAGGAGGAAAGCTGGTGTTaGAAAAGAGAGATTGTGTGTCTTTACGTAAGAGCCAAACCCTAT | + |
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Preference number: 1 (lower is better) Translates to: LLVAPRQTVQEESWC*KREIVCLYVRAKPY Trigger: ATAGGGTTTGGCTCTTACGTAAAGACACACAATCTCTCTTTTTCAACACCAGCTTTCCTCCTGGACTGTTTGCCTCGGGGCGACAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| 3UTR TCA 90 bp | ATGTCATCACTGCCCACAGGTCTTAACAGCAGCTACATCTGCTGCTaGGAGCACAGGATAGGTTGGAAGGATGTCTCAACATTCTCCATA | + |
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Preference number: 1 (lower is better) Translates to: MSSLPTGLNSSYICC*EHRIGWKDVSTFSI Trigger: TATGGAGAATGTTGAGACATCCTTCCAACCTATCCTGTGCTCTCAGCAGCAGATGTAGCTGCTGTTAAGACCTGTGGGCAGTGATGACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR TCA 90 bp | ATCCCAGAGCAGAAAAACAACCTTGTAATTAACACTTTCGCAACTTaGGTGAAAGCAGGCCAGTTTCCTTCCAGCCTTTTCTCTGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: IPEQKNNLVINTFAT*VKAGQFPSSLFSAQ Trigger: CTGGGCAGAGAAAAGGCTGGAAGGAAACTGGCCTGCTTTCACTCAAGTTGCGAAAGTGTTAATTACAAGGTTGTTTTTCTGCTCTGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR CCA 90 bp | GCATCAGATCCTATTACAGATGGTTGTGAGCCACCAGGTAGTTGTTaGATATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDPITDGCEPPGSC*ILNSGPLEEQSVLL Trigger: TAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATATCCAACAACTACCTGGTGGCTCACAACCATCTGTAATAGGATCTGATGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR CCA 90 bp | CTTGTTCCAAGATACAATGTCCACAAAATAATGATACATGCAGTATaGCTTTGTCTCAGCTGTGTCGAAGAACGCCTTCGTCATCGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LVPRYNVHKIMIHAV*LCLSCVEERLRHRR Trigger: CCTCCGATGACGAAGGCGTTCTTCGACACAGCTGAGACAAAGCCATACTGCATGTATCATTATTTTGTGGACATTGTATCTTGGAACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR TCA 90 bp | ATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACTaGGCCTTCTGTACAGCCCGAGAAATGATCTTGATTATATTTATG | + |
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Preference number: 1 (lower is better) Translates to: IELRTSGRTVSALNH*AFCTAREMILIIFM Trigger: CATAAATATAATCAAGATCATTTCTCGGGCTGTACAGAAGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTAAACCCTTCACAGCCTaGCCCTCCCCACCCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: LHSLALPTHSPCEVVWFIKPFTA*PSPPTV Trigger: GACTGTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTT...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCCACCGAACAGTGCGTCGCTaGGGTCTAATCTCTCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PRDPRDFQTLHSLALPTHRTVRR*GLISPQ Trigger: CTGAGGAGAGATTAGACCCCAGCGACGCACTGTTCG...GTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCCACCACCCACAGTCCCTGTaGGGTAGTCTGGTTCATTCT | + |
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Preference number: 2 (lower is better) Translates to: PRDPRDFQTLHSLALPTHHPQSL*GSLVHS Trigger: AGAATGAACCAGACTACCTCACAGGGACTGTGGGTG...GTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTCAGCAGATTCGACAGTaGGGAACAAGTGGGGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: LHSLALPTHSPCEVVWFIQQIRQ*GTSGAS Trigger: CGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTG...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTCAGCAGATTCGACAGTaGGGAACAAGTGGGGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPQQIRQ*GTSGAS Trigger: CGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTG...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTCAAGTGAGGCCTGTCTaGATGGGCCAGAGACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPQVRPV*MGQRPQ Trigger: CTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTG...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACCAGTGTCAGAGTGGATaGCGTCCACGAACAGTGCGT | + |
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Preference number: 2 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDQCQSG*RPRTVR Trigger: ACGCACTGTTCGTGGACGTCATCCACTCTGACACTG...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTGTCCAGCGCCACAGCTaGCACACTTGCCATTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: LHSLALPTHSPCEVVWFIVQRHS*HTCHSY Trigger: ATAGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGAC...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACCGCAGCCAGACAAAGTaGTTTGCTGTAGGGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDRSQTK*FAVGSW Trigger: CCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCG...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCCACGAGATGGCAGAGGATTaGGCACAGGGACCATTTAGA | + |
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Preference number: 2 (lower is better) Translates to: PRDPRDFQTLHSLALPTHEMAED*AQGPFR Trigger: TCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC...GTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATTCCTATAATCCCGATAGGAGTCGCAGGGATAGGCCGTGATGGAGCAGTTCGGTTCCCGCCGAGATaGCAGAGGATTGGGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: AIPIIPIGVAGIGRDGAVRFPPR*QRIGHR Trigger: CCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCG...AACTGCTCCATCACGGCCTATCCCTGCGACTCCTATCGGGATTATAGGAATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTCCTGAGGGTGTGGTATaGCAGGCAGCAGATTCGACA | + |
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Preference number: 2 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIPEGVV*QAADST Trigger: TGTCGAATCTGCTGCCTGTCATACCACACCCTCAGG...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR TCA 90 bp | GGACGCAGCCAGACAAAGTGCTTTGCTGTAGGGAGCTGGGCTATTTCTGTCTTGCAGGGTCAAGACCTGTaGCTCTCCCCAGCTTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: GRSQTKCFAVGSWAISVLQGQDL*LSPASP Trigger: AGGGGAAGCTGGGGAGAGTCACAGGTCTTGACCCTG...CAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCCACAAACTCACAGAGATCTaGCTGCCTCTCCTCTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: PRDPRDFQTLHSLALPTHKLTEI*LPLLSS Trigger: ACTTGAGAGGAGAGGCAGGCAGATCTCTGTGAGTTT...GTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTACGGCCCTGAGGGTGTaGTATGACAGGCAGCAGATT | + |
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Preference number: 2 (lower is better) Translates to: HSPFGSRRDGRGLGTGTITALRV*YDRQQI Trigger: AATCTGCTGCCTGTCATACCACACCCTCAGGGCCGT...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTCCTGAGGGTGTGGTATaGCAGGCAGCAGATTCGACA | + |
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Preference number: 2 (lower is better) Translates to: IRFPPRWQRIGHRDHLDAPEGVV*QAADST Trigger: TGTCGAATCTGCTGCCTGTCATACCACACCCTCAGG...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAATGGTTTTCTTCCCCATaGTTTGGAAGCCTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: AADSTVGNKWGLGTQPDKWFSSP*FGSLQD Trigger: GTCCTGAAGGCTTCCAAAGCATGGGGAAGAAAACCA...TTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCCACGTTGTGCTCCACCACTaGCCAGCTTTTGTTTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: PRDPRDFQTLHSLALPTHVVLHH*PAFVFV Trigger: AACAAAAACAAAAGCTGGGCAGTGGTGGAGCACAAC...GTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTGAGATGGCAGAGGATTaGGCACAGGGACCATTTAGA | + |
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Preference number: 2 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPEMAED*AQGPFR Trigger: TCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR CAA 90 bp | TCTGGATGGGCCAGAGACCTCAGCTTCATCTGCAGGACCCTGAGCTaGTACTTTGGGCCCACTACAGACCCTGTGGAGAACAACAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SGWARDLSFICRTLS*YFGPTTDPVENNKE Trigger: TTCCTTGTTGTTCTCCACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGAAGCTGAGGTCTCTGGCCCATCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR TCA 90 bp | CGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTGCTCCAGAGAAGCTCCTTTaGCCTCTTGGTTTTAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: RQWGTSGASGRSQTKCFAPEKLL*PLGFKL Trigger: AAGCTTAAAACCAAGAGGTCAAAGGAGCTTCTCTGG...AGCAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR GCA 90 bp | CCGTTGAATAAAGGGCCTGCAGGGTCAAGACCTGTGACTCTCCCCAGCTTCCCCTGGTTTTCTTCCCCATaGTTTGGAAGCCTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PLNKGPAGSRPVTLPSFPWFSSP*FGSLQD Trigger: GTCCTGAAGGCTTCCAAAGCATGGGGAAGAAAACCA...GGGGAAGCTGGGGAGAGTCACAGGTCTTGACCCTGCAGGCCCTTTATTCAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTCTCCATTTCTTCCCCATGCTTTaGAAGCCTTCAGGACGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: SLALPTHSPCEVVWFILHFFPML*KPSGRY Trigger: ATAGCGTCCTGAAGGCTTCCAAAGCATGGGGAAGAA...ATGGAGAATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTTTGCTGTAGGGAGCTaGGCTATTTCTGTCTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIFAVGS*AISVLP Trigger: GGGCAAGACAGAAATAGCCCAGCTCCCTACAGCAAA...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCACAGTAGTCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGACGGCCCTGAGGGTGTaGTATGACAGGCAGCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: FTVVHPRDPRDFQTLHSLTALRV*YDRQQI Trigger: AATCTGCTGCCTGTCATACCACACCCTCAGGGCCGT...CAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGACTACTGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTGAGCACTTCAGAAGAGTCTaGACTAAGCCAGAGCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: MAEDWAQGPFRCLPHGPEHFRRV*TKPEPS Trigger: AGAAGGCTCTGGCTTAGTCCAGACTCTTCTGAAGTG...CTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACTCCAAATATTGTCTTaGGGCAACCGGGTTGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: STQGTQGISKPFTAWPSPLQILS*GNRVDL Trigger: TAGATCAACCCGGTTGCCCCAAGACAATATTTGGAG...TGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CAA 90 bp | ATCCCGATAGGAGTCGCAGGGATAGGCCGTGATGGAGCAGTTATTTaGCAGGGATGCAAGGTACAGGTAGACGGACATCTGGTGGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: IPIGVAGIGRDGAVI*QGCKVQVDGHLVVT Trigger: TGTGACCACCAGATGTCCGTCTACCTGTACCTTGCATCCCTGCAAAATAACTGCTCCATCACGGCCTATCCCTGCGACTCCTATCGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCTTCTGTAGCTGGGGCAATTCAATaGAGAGAAGGGCCCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NSGPLEEQSVLLTTEPSVAGAIQ*REGPWA Trigger: GGCCCAGGGCCCTTCTCTTCATTGAATTGCCCCAGC...TACAGAAGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTTCTTCCCCATGCTTTaGAAGCCTTCAGGACGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIFFPML*KPSGRY Trigger: ATAGCGTCCTGAAGGCTTCCAAAGCATGGGGAAGAA...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTACAAATCCAGCTATGTaGGCTCCTAGACTTACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LHSLALPTHSPCEVVWFITNPAM*APRLTP Trigger: TGGAGTAAGTCTAGGAGCCCACATAGCTGGATTTGT...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CAA 90 bp | TTTCCAGCTGTCAGCATAGTAGCCTACACGGGGACATGGCACAATTaGTCCAGCGCCACAGCTGACACACTTGCCATTCCTATAATCCCG | + |
|
Preference number: 2 (lower is better) Translates to: FPAVSIVAYTGTWHN*SSATADTLAIPIIP Trigger: CGGGATTATAGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGACAAATTGTGCCATGTCCCCGTGTAGGCTACTATGCTGACAGCTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGAGGAAAGCTGGTGTTaGAAAAGAGAGATTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDEESWC*KREIVC Trigger: ACACACAATCTCTCTTTTTCAACACCAGCTTTCCTC...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTATTCTTCCCCATGCTTTaGAAGCCTTCAGGACGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: FSIRFPPRWQRIGHRDHLFFPML*KPSGRY Trigger: ATAGCGTCCTGAAGGCTTCCAAAGCATGGGGAAGAA...TAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGCCTCTAAGCCTAATGCCCAGATACCTGGGACCCACACATTGGAAGGAGAGATGGTTTTCTTCCCCATaGTTTGGAAGCCTTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LPLSLMPRYLGPTHWKERWFSSP*FGSLQD Trigger: GTCCTGAAGGCTTCCAAAGCATGGGGAAGAAAACCA...TCTCTCCTTCCAATGTGTGGGTCCCAGGTATCTGGGCATTAGGCTTAGAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACGTAAGAGCCAAACCCTATCAAAAGAAAAGCATGTTCACAGTAGTCCACCGGTTCCCGCCGAGATaGCAGAGGATTGGGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LYVRAKPYQKKSMFTVVHRFPPR*QRIGHR Trigger: CCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCG...GTGGACTACTGTGAACATGCTTTTCTTTTGATAGGGTTTGGCTCTTACGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| 3UTR CAA 90 bp | CCTTCTTGTCGCCCCGAGGCAAACAGTCCAGGAGGAAAGCTGGTGTaGAAAAAGAGAGATTGTGTGTCTTTACGTAAGAGCCAAACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: PSCRPEANSPGGKLV*KKRDCVSLRKSQTL Trigger: TAGGGTTTGGCTCTTACGTAAAGACACACAATCTCTCTTTTTCAACACCAGCTTTCCTCCTGGACTGTTTGCCTCGGGGCGACAAGAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGGGCTCAGTGCACTTAGCATACTCAATCCCAGAGCAGAAAAACAACCTTTTTGCTGTAGGGAGCTaGGCTATTTCTGTCTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: EQGSVHLAYSIPEQKNNLFAVGS*AISVLP Trigger: GGGCAAGACAGAAATAGCCCAGCTCCCTACAGCAAA...AAGGTTGTTTTTCTGCTCTGGGATTGAGTATGCTAAGTGCACTGAGCCCTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCGATTAAATCTTGCGAGGAGACTCACTTGATGGTATTTCTCAAATGCAGAAAACCCTTCACAGCCTaGCCCTCCCCACCCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ISIKSCEETHLMVFLKCRKPFTA*PSPPTV Trigger: GACTGTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTT...TCTGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTACGTAAGAGCCAAACCCTATCAAAAGAAAAGCATGTTCACAGTAGTCCACCCTGAGGGTGTGGTATaGCAGGCAGCAGATTCGACA | + |
|
Preference number: 2 (lower is better) Translates to: LYVRAKPYQKKSMFTVVHPEGVV*QAADST Trigger: TGTCGAATCTGCTGCCTGTCATACCACACCCTCAGG...GTGGACTACTGTGAACATGCTTTTCTTTTGATAGGGTTTGGCTCTTACGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTGTCTTCACACACACCAGAAGAGAGCATCAGATCCTATTACAGATGGTTGTTTCCAGCCTTTTCTCTaGCCAGTCCACATGCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SCLHTHQKRASDPITDGCFQPFL*PVHMLQ Trigger: TTGCAGCATGTGGACTGGGCAGAGAAAAGGCTGGAA...ACAACCATCTGTAATAGGATCTGATGCTCTCTTCTGGTGTGTGTGAAGACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTACGTAAGAGCCAAACCCTATCAAAAGAAAAGCATGTTCACAGTAGTCCACACGGCCCTGAGGGTGTaGTATGACAGGCAGCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: LYVRAKPYQKKSMFTVVHTALRV*YDRQQI Trigger: AATCTGCTGCCTGTCATACCACACCCTCAGGGCCGT...GTGGACTACTGTGAACATGCTTTTCTTTTGATAGGGTTTGGCTCTTACGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| 3UTR CAA 90 bp | GATCCTATTACAGATGGTTGTGAGCCACCAGGTAGTTGTTGGATATaGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACT | + |
|
Preference number: 2 (lower is better) Translates to: DPITDGCEPPGSCWI*NSGPLEEQSVLLTT Trigger: AGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATATCCAACAACTACCTGGTGGCTCACAACCATCTGTAATAGGATC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCTTTCTCCTTCACGTTGTTTTCATCAGAGCATTTTATCATAGCAACGGGTCTGCCCAGTCCACATaGTGCAATGCTAGCCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: KPFLLHVVFIRAFYHSNGSAQST*CNASPV Trigger: AACAGGGCTAGCATTGCAGCATGTGGACTGGGCAGA...CCCGTTGCTATGATAAAATGCTCTGATGAAAACAACGTGAAGGAGAAAGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCTTCTTACGCTCTTGTTCCAAGATACAATGTCCACAAAATAATGATACACAGCAGATTCGACAGTaGGGAACAAGTGGGGCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: TLFLRSCSKIQCPQNNDTQQIRQ*GTSGAS Trigger: CGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTG...TGTATCATTATTTTGTGGACATTGTATCTTGGAACAAGAGCGTAAGAAGAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTCGATTAAATCTTGCGAGGAGACTCACTTGATGGTATTTCTCAAATGCAGAACGGCCCTGAGGGTGTaGTATGACAGGCAGCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: ISIKSCEETHLMVFLKCRTALRV*YDRQQI Trigger: AATCTGCTGCCTGTCATACCACACCCTCAGGGCCGT...TCTGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCTTCTGTAGAATTGTGTAAGAGCTaGGAAACTAGTCCAGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: NSGPLEEQSVLLTTEPSVELCKS*ETSPVR Trigger: TCTCACTGGACTAGTTTCCCAGCTCTTACACAATTC...TACAGAAGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR CAA 90 bp | TCCAAGATACAATGTCCACAAAATAATGATACATGCAGTATGGCTTaGTCTCAGCTGTGTCGAAGAACGCCTTCGTCATCGGAGGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: SKIQCPQNNDTCSMA*SQLCRRTPSSSEDL Trigger: GAGATCCTCCGATGACGAAGGCGTTCTTCGACACAGCTGAGACAAAGCCATACTGCATGTATCATTATTTTGTGGACATTGTATCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CAA 90 bp | TGCCACCTTATCCAGATCTCGATTAAATCTTGCGAGGAGACTCACTaGATGGTATTTCTCAAATGCAGATGGCTCATGATCGATTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: CHLIQISIKSCEETH*MVFLKCRWLMIDFG Trigger: TCCAAAATCGATCATGAGCCATCTGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGATCTGGATAAGGTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGAAAAAGAGAGATTGTGTGTCTTTACGTAAGAGCCAAACCCTATCAAAAGAATGGTTTTCTTCCCCATaGTTTGGAAGCCTTCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LKKRDCVSLRKSQTLSKEWFSSP*FGSLQD Trigger: GTCCTGAAGGCTTCCAAAGCATGGGGAAGAAAACCA...TTCTTTTGATAGGGTTTGGCTCTTACGTAAAGACACACAATCTCTCTTTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACTCACTTGATGGTATTTCTCAAATGCAGATGGCTCATGATCGATTTTGGCAAAATAATGATACATaGAGTATGGCTTTGTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GDSLDGISQMQMAHDRFWQNNDT*SMALSQ Trigger: CTGAGACAAAGCCATACTGCATGTATCATTATTTTG...CCAAAATCGATCATGAGCCATCTGCATTTGAGAAATACCATCAAGTGAGTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CCA 72 bp | CTGAGGGTGTGGTATGACAGGCAGCAGATTCGACAGTaGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LRVWYDRQQIRQ*GTSGASGRSQT Trigger: TGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACACCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR CCA 72 bp | CTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTaGTTCATTCTCCATTCGGTTCCCGCCGAGATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LALPTHSPCEVV*FILHSVPAEMA Trigger: TGCCATCTCGGCGGGAACCGAATGGAGAATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| 3UTR GCA 72 bp | TGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTaGCCCACGGCCCTGAGGGTGTGGTATGACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: WQRIGHRDHLDA*PTALRVWYDRQ Trigger: CTGCCTGTCATACCACACCCTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR GCA 72 bp | TCCAGGGAGGCCTGGGAAGACTTCTCAGAGTTTCCATaGCCCAAGAGCCGGCCATGCTCTGAATCTGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SREAWEDFSEFP*PKSRPCSESEP Trigger: GGGCTCAGATTCAGAGCATGGCCGGCTCTTGGGGCATGGAAACTCTGAGAAGTCTTCCCAGGCCTCCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR TCA 72 bp | GATGGGCCAGAGACCTCAGCTTCATCTGCAGGACCCTaGGCTTGTACTTTGGGCCCACTACAGACCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DGPETSASSAGP*ACTLGPLQTLW Trigger: CCACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGAAGCTGAGGTCTCTGGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR GCA 72 bp | GGCCTGTCTGGATGGGCCAGAGACCTCAGCTTCATCTaGAGGACCCTGAGCTTGTACTTTGGGCCCACTACA | + |
|
Preference number: 3 (lower is better) Translates to: GLSGWARDLSFI*RTLSLYFGPTT Trigger: TGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGAAGCTGAGGTCTCTGGCCCATCCAGACAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CCA 72 bp | ATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTaGGCACAGGGACCATTTAGATGCTTGCCCCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: ILHSVPAEMAED*AQGPFRCLPHG Trigger: GCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR TCA 72 bp | TTTAGATGCTTGCCCCACGGCCCTGAGGGTGTGGTATaGCAGGCAGCAGATTCGACAGTGGGGAACAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FRCLPHGPEGVV*QAADSTVGNKW Trigger: CCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACACCCTCAGGGCCGTGGGGCAAGCATCTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR GCA 72 bp | AAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTaGTGTAGGGAGCTGGGCTATTTCTGTCTTGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KWGLGTQPDKVL*CRELGYFCLAL Trigger: TAGGGCAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR GCA 72 bp | GGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTaGTTTGCTGTAGGGAGCTGGGCTATTTCTGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GTSGASGRSQTK*FAVGSWAISVL Trigger: CAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTGTTTCTTCCCCATGCTTaGGAAGCCTTCAGGACGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FDSGEQVGPRDAARQSALFLPHA*EAFRTL Trigger: TAGCGTCCTGAAGGCTTCCAAAGCATGGGGAAGAAA...CAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTTTTCTTCCCCATGCTTaGGAAGCCTTCAGGACGCTA | + |
|
Preference number: 3 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPFLPHA*EAFRTL Trigger: TAGCGTCCTGAAGGCTTCCAAAGCATGGGGAAGAAA...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR TCA 72 bp | CTTCCTTGTAGCCTAGTGCGTCAGTGTCAGAGTGGATaGCGTCCACGAACAGTGCGTCGCTGGGGTCTAATC | + |
|
Preference number: 3 (lower is better) Translates to: LPCSLVRQCQSG*RPRTVRRWGLI Trigger: GATTAGACCCCAGCGACGCACTGTTCGTGGACGTCATCCACTCTGACACTGACGCACTAGGCTACAAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR GCA 72 bp | AGGGTTTCTCCGTGTAGCCCTGGTTGTCCCGGAACTTaGTCTATAGACCAGGCTGTCCTCAAACTCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RVSPCSPGCPGT*SIDQAVLKLTE Trigger: CTCTGTGAGTTTGAGGACAGCCTGGTCTATAGAGCAAGTTCCGGGACAACCAGGGCTACACGGAGAAACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR CCA 72 bp | AATACCTCTGGCCATCAGCATCACTTCAGAAGAGTCTaGACTAAGCCAGAGCCTTCTTGTCGCCCCGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: NTSGHQHHFRRV*TKPEPSCRPEA Trigger: TGCCTCGGGGCGACAAGAAGGCTCTGGCTTAGTCCAGACTCTTCTGAAGTGATGCTGATGGCCAGAGGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR CCA 72 bp | CCTCAGCTTCATCTGCAGGACCCTGAGCTTGTACTTTaGGCCCACTACAGACCCTGTGGAGAACAACAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PQLHLQDPELVL*AHYRPCGEQQG Trigger: TCCTTGTTGTTCTCCACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGAAGCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CCA 72 bp | AAGGACGAGATCATATCGACACAAGTGAGGCCTGTCTaGATGGGCCAGAGACCTCAGCTTCATCTGCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KDEIISTQVRPV*MGQRPQLHLQD Trigger: GTCCTGCAGATGAAGCTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTGTGTCGATATGATCTCGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTATTTCTTCCCCATGCTTaGGAAGCCTTCAGGACGCTA | + |
|
Preference number: 3 (lower is better) Translates to: FSIRFPPRWQRIGHRDHLFLPHA*EAFRTL Trigger: TAGCGTCCTGAAGGCTTCCAAAGCATGGGGAAGAAA...TAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTGAGAGAGCACAGGATAGGTaGGAAGGATGTCTCAACATT | + |
|
Preference number: 3 (lower is better) Translates to: MAEDWAQGPFRCLPHGPERAQDR*EGCLNI Trigger: AATGTTGAGACATCCTTCCAACCTATCCTGTGCTCT...CTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR TCA 72 bp | CACGGGGACATGGCACAATTTGTCCAGCGCCACAGCTaGCACACTTGCCATTCCTATAATCCCGATAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HGDMAQFVQRHS*HTCHSYNPDRS Trigger: ACTCCTATCGGGATTATAGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGACAAATTGTGCCATGTCCCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR GCA 72 bp | GGGATAGGCCGTGATGGAGCAGTTATTTTGCAGGGATaGAAGGTACAGGTAGACGGACATCTGGTGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GIGRDGAVILQG*KVQVDGHLVVT Trigger: TGTGACCACCAGATGTCCGTCTACCTGTACCTTGCATCCCTGCAAAATAACTGCTCCATCACGGCCTATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CCA 72 bp | GAAATGTTTGAAGTCACATCTGCCTCCAGGGAGGCCTaGGAAGACTTCTCAGAGTTTCCATGCCCCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EMFEVTSASREA*EDFSEFPCPKS Trigger: GCTCTTGGGGCATGGAAACTCTGAGAAGTCTTCCCAGGCCTCCCTGGAGGCAGATGTGACTTCAAACATTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCCTCTAAGCCTAATGCCCAGATACCTGGGACCCACACATTGGAAGGAGAGATGTTCTACTTTCATTTaGCCCTCTGTCCCTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LPLSLMPRYLGPTHWKERCSTFI*PSVPGP Trigger: GGGGCCAGGGACAGAGGGCAAAATGAAAGTAGAACA...TCTCTCCTTCCAATGTGTGGGTCCCAGGTATCTGGGCATTAGGCTTAGAGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGAACAGTGCGTCGCTGGGGTCTAATCTCTCCTCAGGAGGTCTCCCGTTGAATAGCTCCTTTGACCTCTaGGTTTTAAGCTTCCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: TNSASLGSNLSSGGLPLNSSFDL*VLSFQT Trigger: GGTTTGGAAGCTTAAAACCAAGAGGTCAAAGGAGCT...ATTCAACGGGAGACCTCCTGAGGAGAGATTAGACCCCAGCGACGCACTGTTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTGAGTCTTCGCCTCTCAGTTaGATTGTAATAAACCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: MAEDWAQGPFRCLPHGPESSPLS*IVINPL Trigger: AAGAGGGTTTATTACAATCAAACTGAGAGGCGAAGA...CTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR TCA 72 bp | ACATTCTCCATAAGGACGAGATCATATCGACACAAGTaGGGCCTGTCTGGATGGGCCAGAGACCTCAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TFSIRTRSYRHK*GLSGWARDLSF Trigger: GAAGCTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTGTGTCGATATGATCTCGTCCTTATGGAGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR TCA 72 bp | CTGCCCACAGGTCTTAACAGCAGCTACATCTGCTGCTaGGAGCACAGGATAGGTTGGAAGGATGTCTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: LPTGLNSSYICC*EHRIGWKDVST Trigger: TGTTGAGACATCCTTCCAACCTATCCTGTGCTCTCAGCAGCAGATGTAGCTGCTGTTAAGACCTGTGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR GCA 72 bp | GACTTCTCAGAGTTTCCATGCCCCAAGAGCCGGCCATaGTCTGAATCTGAGCCCCACAAGTTTGAGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: DFSEFPCPKSRP*SESEPHKFEKQ Trigger: TTGTTTCTCAAACTTGTGGGGCTCAGATTCAGAGCATGGCCGGCTCTTGGGGCATGGAAACTCTGAGAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR TCA 72 bp | GCCCCGAGGCAAACAGTCCAGGAGGAAAGCTGGTGTTaGAAAAGAGAGATTGTGTGTCTTTACGTAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: APRQTVQEESWC*KREIVCLYVRA Trigger: GGCTCTTACGTAAAGACACACAATCTCTCTTTTTCAACACCAGCTTTCCTCCTGGACTGTTTGCCTCGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR TCA 72 bp | TCCTATAATCCCGATAGGAGTCGCAGGGATAGGCCGTaGTGGAGCAGTTATTTTGCAGGGATGCAAGGTACA | + |
|
Preference number: 3 (lower is better) Translates to: SYNPDRSRRDRP*WSSYFAGMQGT Trigger: TGTACCTTGCATCCCTGCAAAATAACTGCTCCATCACGGCCTATCCCTGCGACTCCTATCGGGATTATAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR TCA 72 bp | CAGATGGTTGTGAGCCACCAGGTAGTTGTTGGATATTaGACTCAGGACCTCTGGAAGAACAGTCAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QMVVSHQVVVGY*TQDLWKNSQCS Trigger: AGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATATCCAACAACTACCTGGTGGCTCACAACCATCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR CCA 72 bp | CACATTTGCTCACAGTATCCATTTCTTTACAATAGCTaGGGCAATTCAATGAAGAGAAGGGCCCTGGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: HICSQYPFLYNS*GNSMKRRALGL Trigger: CAGGCCCAGGGCCCTTCTCTTCATTGAATTGCCCCAGCTATTGTAAAGAAATGGATACTGTGAGCAAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR TCA 72 bp | CAAGGTACAGGTAGACGGACATCTGGTGGTCACACTTaGAGTACTTTATACCTCCAAATATTGTCTTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QGTGRRTSGGHT*STLYLQILSWG Trigger: GCCCCAAGACAATATTTGGAGGTATAAAGTACTTCAAGTGTGACCACCAGATGTCCGTCTACCTGTACCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR TCA 72 bp | CTCCAATCATGTAAATGTTGTCCAGAGAAGCTCCTTTaGCCTCTTGGTTTTAAGCTTCCAAACCAGCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LQSCKCCPEKLL*PLGFKLPNQPP Trigger: TGGTGGCTGGTTTGGAAGCTTAAAACCAAGAGGTCAAAGGAGCTTCTCTGGACAACATTTACATGATTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACATTGGAAGGAGAGAACTGACTCCCACAAATTTCCTTCTGAACTCCACATGGTTATTCAGAAATGTTaGAAGTCACATCTGCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: THWKERTDSHKFPSELHMVIQKC*KSHLPP Trigger: TGGAGGCAGATGTGACTTCAAACATTTCTGAATAAC...CATGTGGAGTTCAGAAGGAAATTTGTGGGAGTCAGTTCTCTCCTTCCAATGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR TCA 72 bp | CAGAAAAACAACCTTGTAATTAACACTTTCGCAACTTaGGTGAAAGCAGGCCAGTTTCCTTCCAGCCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QKNNLVINTFAT*VKAGQFPSSLF Trigger: GAAAAGGCTGGAAGGAAACTGGCCTGCTTTCACTCAAGTTGCGAAAGTGTTAATTACAAGGTTGTTTTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCGATTAAATCTTGCGAGGAGACTCACTTGATGGTATTTCTCAAATGCAGAATCTGGTGGTCACACTaGAAGTACTTTATACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ISIKSCEETHLMVFLKCRIWWSH*KYFIPP Trigger: TGGAGGTATAAAGTACTTCAAGTGTGACCACCAGAT...TCTGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR GCA 72 bp | TGTTCCAAGATACAATGTCCACAAAATAATGATACATaGAGTATGGCTTTGTCTCAGCTGTGTCGAAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: CSKIQCPQNNDT*SMALSQLCRRT Trigger: CGTTCTTCGACACAGCTGAGACAAAGCCATACTGCATGTATCATTATTTTGTGGACATTGTATCTTGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCCACCAGGAGGTCTCCCGTTaGATAAAGGGCCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRDPRDFQTLHSLALPTHQEVSR*IKGLQG Trigger: ACCCTGCAGGCCCTTTATTCAACGGGAGACCTCCTG...GTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCCACTCATCTGCAGGACCCTaGGCTTGTACTTTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRDPRDFQTLHSLALPTHSSAGP*ACTLGP Trigger: TGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGA...GTGGGTGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCAACCACCGCGCTGTaGAAGCTCAGTCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: STQGTQGISKPFTAWPSPPTTAL*KLSLVK Trigger: CTTCACCAGACTGAGCTTCCACAGCGCGGTGGTTGG...TGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAGGAAGCTCAGTCTGGTaGAGGACGGGCATGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSRFDSGEQVGPRDAARQGSSVW*RTGMFH Trigger: ATGAAACATGCCCGTCCTTCACCAGACTGAGCTTCC...TTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTCTCCATCAGGAGGTCTCCCGTTaGATAAAGGGCCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLALPTHSPCEVVWFILHQEVSR*IKGLQG Trigger: ACCCTGCAGGCCCTTTATTCAACGGGAGACCTCCTG...ATGGAGAATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTCCAGCGCCACAGCTaGCACACTTGCCATTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: AADSTVGNKWGLGTQPDKVQRHS*HTCHSY Trigger: ATAGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGAC...TTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTCCAACCACCGCGCTGTaGAAGCTCAGTCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPPTTAL*KLSLVK Trigger: CTTCACCAGACTGAGCTTCCACAGCGCGGTGGTTGG...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTGCGGAGGGGAGCCTGTTaGCCGGAAACCGTGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: FDSGEQVGPRDAARQSALRRGAC*PETVDY Trigger: ATAATCCACGGTTTCCGGCCAACAGGCTCCCCTCCG...CAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | CGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTGCTCGAACAGTGCGTCGCTaGGGTCTAATCTCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQWGTSGASGRSQTKCFARTVRR*GLISPQ Trigger: CTGAGGAGAGATTAGACCCCAGCGACGCACTGTTCG...AGCAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTCTCCATCAAGTGAGGCCTGTCTaGATGGGCCAGAGACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLALPTHSPCEVVWFILHQVRPV*MGQRPQ Trigger: CTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTG...ATGGAGAATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTCAGTGTCAGAGTGGATaGCGTCCACGAACAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LHSLALPTHSPCEVVWFIQCQSG*RPRTVR Trigger: ACGCACTGTTCGTGGACGTCATCCACTCTGACACTG...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTCTCCATGTCCAGCGCCACAGCTaGCACACTTGCCATTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: SLALPTHSPCEVVWFILHVQRHS*HTCHSY Trigger: ATAGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGAC...ATGGAGAATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | CACAGTAGTCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCAACCACCGCGCTGTaGAAGCTCAGTCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSSPPKGPKGFPNPSQPGPTTAL*KLSLVK Trigger: CTTCACCAGACTGAGCTTCCACAGCGCGGTGGTTGG...GCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGACTACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTCGGAGGGGAGCCTGTTaGCCGGAAACCGTGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIRRGAC*PETVDY Trigger: ATAATCCACGGTTTCCGGCCAACAGGCTCCCCTCCG...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTGAGCGAACAGTGCGTCGCTaGGGTCTAATCTCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MAEDWAQGPFRCLPHGPERTVRR*GLISPQ Trigger: CTGAGGAGAGATTAGACCCCAGCGACGCACTGTTCG...CTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTCAAGTGAGGCCTGTCTaGATGGGCCAGAGACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIQVRPV*MGQRPQ Trigger: CTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTG...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTGAGGGAAGCTCAGTCTGGTaGAGGACGGGCATGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MAEDWAQGPFRCLPHGPEGSSVW*RTGMFH Trigger: ATGAAACATGCCCGTCCTTCACCAGACTGAGCTTCC...CTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | CACAGTAGTCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCTCATCTGCAGGACCCTaGGCTTGTACTTTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSSPPKGPKGFPNPSQPGSSAGP*ACTLGP Trigger: TGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGA...GCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGACTACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTCGAACAGTGCGTCGCTaGGGTCTAATCTCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIRTVRR*GLISPQ Trigger: CTGAGGAGAGATTAGACCCCAGCGACGCACTGTTCG...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACCCTGAGCTTGTACTTTaGGCCCACTACAGACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDPELVL*AHYRPC Trigger: ACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGG...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR CAA 72 bp | GCCAGAGACCTCAGCTTCATCTGCAGGACCCTGAGCTaGTACTTTGGGCCCACTACAGACCCTGTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ARDLSFICRTLS*YFGPTTDPVEN Trigger: GTTCTCCACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGAAGCTGAGGTCTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGTCCAGCGCCACAGCTaGCACACTTGCCATTCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSIRFPPRWQRIGHRDHLVQRHS*HTCHSY Trigger: ATAGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGAC...TAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTCATCTGCAGGACCCTaGGCTTGTACTTTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRFPPRWQRIGHRDHLDASSAGP*ACTLGP Trigger: TGGGCCCAAAGTACAAGCTCAGGGTCCTGCAGATGA...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTGGAGTTGATGATCTGTaGACAGGTCTGGTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSLALPTHSPCEVVWFIGVDDL*TGLVSL Trigger: CAGAGAGACCAGACCTGTGCACAGATCATCAACTCC...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | CCGTTGAATAAAGGGCCTGCAGGGTCAAGACCTGTGACTCTCCCCAGCTTCCCCGGAGTTGATGATCTGTaGACAGGTCTGGTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNKGPAGSRPVTLPSFPGVDDL*TGLVSL Trigger: CAGAGAGACCAGACCTGTGCACAGATCATCAACTCC...GGGGAAGCTGGGGAGAGTCACAGGTCTTGACCCTGCAGGCCCTTTATTCAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTCCTATAATCCCGATAGGAGTCGCAGGGATAGGCCGTGATGGAGCAGTTCGGAGGGGAGCCTGTTaGCCGGAAACCGTGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: AIPIIPIGVAGIGRDGAVRRGAC*PETVDY Trigger: ATAATCCACGGTTTCCGGCCAACAGGCTCCCCTCCG...AACTGCTCCATCACGGCCTATCCCTGCGACTCCTATCGGGATTATAGGAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAACCACTACAGACCCTGTaGAGAACAACAAGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRFDSGEQVGPRDAARQPLQTL*RTTRKS Trigger: AGATTTCCTTGTTGTTCTCCACAGGGTCTGTAGTGG...TTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCTAAGCCTAATGCCCAGATACCTGGGACCCACACATTGGAAGGAGAGACGGAGGGGAGCCTGTTaGCCGGAAACCGTGGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLSLMPRYLGPTHWKERRRGAC*PETVDY Trigger: ATAATCCACGGTTTCCGGCCAACAGGCTCCCCTCCG...TCTCTCCTTCCAATGTGTGGGTCCCAGGTATCTGGGCATTAGGCTTAGAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| CDS-3UTR CCA 90 bp | CGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTGCTACAAATCCAGCTATGTaGGCTCCTAGACTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQWGTSGASGRSQTKCFATNPAM*APRLTP Trigger: TGGAGTAAGTCTAGGAGCCCACATAGCTGGATTTGT...AGCAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTACCTGAGCTTGTACTTTaGGCCCACTACAGACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSIRFPPRWQRIGHRDHLPELVL*AHYRPC Trigger: ACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGG...TAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR CAA 72 bp | GGAGTCGCAGGGATAGGCCGTGATGGAGCAGTTATTTaGCAGGGATGCAAGGTACAGGTAGACGGACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVAGIGRDGAVI*QGCKVQVDGHL Trigger: CAGATGTCCGTCTACCTGTACCTTGCATCCCTGCAAAATAACTGCTCCATCACGGCCTATCCCTGCGACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| 3UTR CAA 72 bp | GTCAGCATAGTAGCCTACACGGGGACATGGCACAATTaGTCCAGCGCCACAGCTGACACACTTGCCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSIVAYTGTWHN*SSATADTLAIP Trigger: AGGAATGGCAAGTGTGTCAGCTGTGGCGCTGGACAAATTGTGCCATGTCCCCGTGTAGGCTACTATGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| CDS-3UTR TCA 90 bp | TTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTGGCGAGGAGACTCACTTaGTGGTATTTCTCAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FDSGEQVGPRDAARQSALARRLT*WYFSNA Trigger: TGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGC...CAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTGAGGCGAGGAGACTCACTTaGTGGTATTTCTCAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: MAEDWAQGPFRCLPHGPEARRLT*WYFSNA Trigger: TGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGC...CTCAGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTGGAGTTGATGATCTGTaGACAGGTCTGGTCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRFPPRWQRIGHRDHLDAGVDDL*TGLVSL Trigger: CAGAGAGACCAGACCTGTGCACAGATCATCAACTCC...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTCAACAAGGAAATCTCTaGCACCTTATCCAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPQQGNL*HLIQIS Trigger: CGAGATCTGGATAAGGTGGCAGAGATTTCCTTGTTG...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACCTCCAAATATTGTCTTaGGGCAACCGGGTTGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDLQILS*GNRVDL Trigger: TAGATCAACCCGGTTGCCCCAAGACAATATTTGGAG...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060673.8 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTCCACTACAGACCCTGTaGAGAACAACAAGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSLALPTHSPCEVVWFIPLQTL*RTTRKS Trigger: AGATTTCCTTGTTGTTCTCCACAGGGTCTGTAGTGG...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTCAACAAGGAAATCTCTaGCACCTTATCCAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIQQGNL*HLIQIS Trigger: CGAGATCTGGATAAGGTGGCAGAGATTTCCTTGTTG...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | ATATTGTCTTGGGGCAACCGGGTTGATCTAGTCCTCCATTCGGGTAGAAGTCTACCAACCACCGCGCTGTaGAAGCTCAGTCTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSWGNRVDLVLHSGRSLPTTAL*KLSLVK Trigger: CTTCACCAGACTGAGCTTCCACAGCGCGGTGGTTGG...TAGACTTCTACCCGAATGGAGGACTAGATCAACCCGGTTGCCCCAAGACAATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTGCCACTGTTATTCAGAAATGTTTGAAGTCACATCTGCCTCCAGGGAGGCAGGAGGTCTCCCGTTaGATAAAGGGCCTGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFATVIQKCLKSHLPPGRQEVSR*IKGLQG Trigger: ACCCTGCAGGCCCTTTATTCAACGGGAGACCTCCTG...CCTCCCTGGAGGCAGATGTGACTTCAAACATTTCTGAATAACAGTGGCAAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| CDS-3UTR TCA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTGCGAGGAGACTCACTTaGTGGTATTTCTCAAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRFPPRWQRIGHRDHLDAARRLT*WYFSNA Trigger: TGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGC...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAACAAAATAATGATACATaGAGTATGGCTTTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRFDSGEQVGPRDAARQQNNDT*SMALSQ Trigger: CTGAGACAAAGCCATACTGCATGTATCATTATTTTG...TTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACATGGTATTTCTCAAATaGAGATGGCTCATGATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDMVFLK*RWLMID Trigger: ATCGATCATGAGCCATCTGCATTTGAGAAATACCAT...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACAGCCTGGCCCTCCCCACCCACAGTCCCTGTGAGGTAGTCTGGTTCATTATGGTATTTCTCAAATaGAGATGGCTCATGATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHSLALPTHSPCEVVWFIMVFLK*RWLMID Trigger: ATCGATCATGAGCCATCTGCATTTGAGAAATACCAT...AATGAACCAGACTACCTCACAGGGACTGTGGGTGGGGAGGGCCAGGCTGTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | GGACGCAGCCAGACAAAGTGCTTTGCTGTAGGGAGCTGGGCTATTTCTGTCTTGCAACAAGGAAATCTCTaGCACCTTATCCAGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRSQTKCFAVGSWAISVLQQGNL*HLIQIS Trigger: CGAGATCTGGATAAGGTGGCAGAGATTTCCTTGTTG...CAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGTTGGCCGGAAACCGTaGATTATAAAAGTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSIRFPPRWQRIGHRDHLVGRKP*IIKVVF Trigger: GAAAACCACTTTTATAATCCACGGTTTCCGGCCAAC...TAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCACCTTTGACCAACATCTaGTCAATAAATTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: STQGTQGISKPFTAWPSPPLTNI*SINSFK Trigger: TTTGAAGGAATTTATTGACCAGATGTTGGTCAAAGG...TGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTCTTCCACTTAGCTGCACAGGCCTCAGGGCTATGAGCCCAGCCCAAACAAATCCAGCTATGTaGGCTCCTAGACTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFLPLSCTGLRAMSPAQTNPAM*APRLTP Trigger: TGGAGTAAGTCTAGGAGCCCACATAGCTGGATTTGT...TTGGGCTGGGCTCATAGCCCTGAGGCCTGTGCAGCTAAGTGGAAGAAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 |
||
| CDS-3UTR CCA 90 bp | TTCACAGTAGTCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGACAAATCCAGCTATGTaGGCTCCTAGACTTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTVVHPRDPRDFQTLHSLTNPAM*APRLTP Trigger: TGGAGTAAGTCTAGGAGCCCACATAGCTGGATTTGT...CAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGACTACTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTCTTCCACTTAGCTGCACAGGCCTCAGGGCTATGAGCCCAGCCCAACTCCAAATATTGTCTTaGGGCAACCGGGTTGATCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLFLPLSCTGLRAMSPAQLQILS*GNRVDL Trigger: TAGATCAACCCGGTTGCCCCAAGACAATATTTGGAG...TTGGGCTGGGCTCATAGCCCTGAGGCCTGTGCAGCTAAGTGGAAGAAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| CDS-3UTR CCA 90 bp | AACTCAGGACCTCTGGAAGAACAGTCAGTGCTCTTAACCACTGAGCCTTCTGTACCTGAGCTTGTACTTTaGGCCCACTACAGACCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSGPLEEQSVLLTTEPSVPELVL*AHYRPC Trigger: ACAGGGTCTGTAGTGGGCCCAAAGTACAAGCTCAGG...TACAGAAGGCTCAGTGGTTAAGAGCACTGACTGTTCTTCCAGAGGTCCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR CAA 72 bp | CGCCCCGAGGCAAACAGTCCAGGAGGAAAGCTGGTGTaGAAAAAGAGAGATTGTGTGTCTTTACGTAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPEANSPGGKLV*KKRDCVSLRKS Trigger: GCTCTTACGTAAAGACACACAATCTCTCTTTTTCAACACCAGCTTTCCTCCTGGACTGTTTGCCTCGGGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTATCTCGATTAAATCTTaGGAGGAGACTCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: IRFPPRWQRIGHRDHLDAISIKS*EETHLM Trigger: CATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGAT...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCAGGTAGTTGTTGGATATaGAACTCAGGACCTCTGGAAGAACAGTCAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPGSCWI*NSGPLEEQSVL Trigger: GAGCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATATCCAACAACTACCTGGTGGCTCACAACCATCTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATGATCTTGATTATATTTATGGACACCTGCCCATTGTAGGTGGCACCATTCAGGGTCAAGACCTGTaGCTCTCCCCAGCTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNDLDYIYGHLPIVGGTIQGQDL*LSPASP Trigger: AGGGGAAGCTGGGGAGAGTCACAGGTCTTGACCCTG...AATGGTGCCACCTACAATGGGCAGGTGTCCATAAATATAATCAAGATCATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| CDS-3UTR GCA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTATGGTATTTCTCAAATaGAGATGGCTCATGATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRFPPRWQRIGHRDHLDAMVFLK*RWLMID Trigger: ATCGATCATGAGCCATCTGCATTTGAGAAATACCAT...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | AAACCCTTTCTCCTTCACGTTGTTTTCATCAGAGCATTTTATCATAGCAACGGGCAAGTGAGGCCTGTCTaGATGGGCCAGAGACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPFLLHVVFIRAFYHSNGQVRPV*MGQRPQ Trigger: CTGAGGTCTCTGGCCCATCCAGACAGGCCTCACTTG...CCCGTTGCTATGATAAAATGCTCTGATGAAAACAACGTGAAGGAGAAAGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| CDS-3UTR TCA 90 bp | CGAGGAGACTCACTTGATGGTATTTCTCAAATGCAGATGGCTCATGATCGATTTGGAAGCTCAGTCTGGTaGAGGACGGGCATGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGDSLDGISQMQMAHDRFGSSVW*RTGMFH Trigger: ATGAAACATGCCCGTCCTTCACCAGACTGAGCTTCC...AAATCGATCATGAGCCATCTGCATTTGAGAAATACCATCAAGTGAGTCTCCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
||
| CDS-3UTR GCA 90 bp | AAAGTGCTTTGCTGTAGGGAGCTGGGCTATTTCTGTCTTGCCCTAGTTAGGGCGATCTCGATTAAATCTTaGGAGGAGACTCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KVLCCRELGYFCLALVRAISIKS*EETHLM Trigger: CATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGAT...CGCCCTAACTAGGGCAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTCCTTTGACCAACATCTaGTCAATAAATTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IRFPPRWQRIGHRDHLDAPLTNI*SINSFK Trigger: TTTGAAGGAATTTATTGACCAGATGTTGGTCAAAGG...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR GCA 90 bp | GGACGCAGCCAGACAAAGTGCTTTGCTGTAGGGAGCTGGGCTATTTCTGTCTTGCAAAATAATGATACATaGAGTATGGCTTTGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRSQTKCFAVGSWAISVLQNNDT*SMALSQ Trigger: CTGAGACAAAGCCATACTGCATGTATCATTATTTTG...CAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTCTTCCACTTAGCTGCACAGGCCTCAGGGCTATGAGCCCAGCCCAACCTTTGACCAACATCTaGTCAATAAATTCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFLPLSCTGLRAMSPAQPLTNI*SINSFK Trigger: TTTGAAGGAATTTATTGACCAGATGTTGGTCAAAGG...TTGGGCTGGGCTCATAGCCCTGAGGCCTGTGCAGCTAAGTGGAAGAAAGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 |
||
| CDS-3UTR TCA 90 bp | AGAAATGATCTTGATTATATTTATGGACACCTGCCCATTGTAGGTGGCACCATTGGAAGCTCAGTCTGGTaGAGGACGGGCATGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RNDLDYIYGHLPIVGGTIGSSVW*RTGMFH Trigger: ATGAAACATGCCCGTCCTTCACCAGACTGAGCTTCC...AATGGTGCCACCTACAATGGGCAGGTGTCCATAAATATAATCAAGATCATTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
||
| 3UTR CAA 72 bp | CAATGTCCACAAAATAATGATACATGCAGTATGGCTTaGTCTCAGCTGTGTCGAAGAACGCCTTCGTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: QCPQNNDTCSMA*SQLCRRTPSSS Trigger: CGATGACGAAGGCGTTCTTCGACACAGCTGAGACAAAGCCATACTGCATGTATCATTATTTTGTGGACATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| CDS-3UTR TCA 90 bp | TTGAAAAAGAGAGATTGTGTGTCTTTACGTAAGAGCCAAACCCTATCAAAAGAACAGTGTCAGAGTGGATaGCGTCCACGAACAGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: LKKRDCVSLRKSQTLSKEQCQSG*RPRTVR Trigger: ACGCACTGTTCGTGGACGTCATCCACTCTGACACTG...TTCTTTTGATAGGGTTTGGCTCTTACGTAAAGACACACAATCTCTCTTTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CCA 90 bp | AAACCCTTTCTCCTTCACGTTGTTTTCATCAGAGCATTTTATCATAGCAACGGGCCACTACAGACCCTGTaGAGAACAACAAGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KPFLLHVVFIRAFYHSNGPLQTL*RTTRKS Trigger: AGATTTCCTTGTTGTTCTCCACAGGGTCTGTAGTGG...CCCGTTGCTATGATAAAATGCTCTGATGAAAACAACGTGAAGGAGAAAGGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| 3UTR CAA 72 bp | ATCCAGATCTCGATTAAATCTTGCGAGGAGACTCACTaGATGGTATTTCTCAAATGCAGATGGCTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: IQISIKSCEETH*MVFLKCRWLMI Trigger: GATCATGAGCCATCTGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGATCTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| CDS-3UTR GCA 90 bp | TTGAAAAAGAGAGATTGTGTGTCTTTACGTAAGAGCCAAACCCTATCAAAAGAAATCTCGATTAAATCTTaGGAGGAGACTCACTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LKKRDCVSLRKSQTLSKEISIKS*EETHLM Trigger: CATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGAT...TTCTTTTGATAGGGTTTGGCTCTTACGTAAAGACACACAATCTCTCTTTTTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | GAAGACTTCTCAGAGTTTCCATGCCCCAAGAGCCGGCCATGCTCTGAATCTGAGCCGGAGGGGAGCCTGTaGGCCGGAAACCGTGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: EDFSEFPCPKSRPCSESEPEGSL*AGNRGL Trigger: TAATCCACGGTTTCCGGCCAACAGGCTCCCCTCCGG...CTCAGATTCAGAGCATGGCCGGCTCTTGGGGCATGGAAACTCTGAGAAGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| CDS-3UTR CAA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACTGCAGGACCCTGAGCTaGTACTTTGGGCCCACTACA | + |
|
Preference number: 5 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDCRTLS*YFGPTT Trigger: TGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCA...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCCCTCCCCAGGGGGTATATCACAGTaGTCGCTCCTCGATTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: STQGTQGISKPFTAWPSPGGISQ*SLLDSN Trigger: ATTGGAATCGAGGAGCGACAACTGTGATATACCCCC...TGGGGAGGGCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | CCGTTGAATAAAGGGCCTGCAGGGTCAAGACCTGTGACTCTCCCCAGCTTCCCCGGGGGTATATCACAGTaGTCGCTCCTCGATTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLNKGPAGSRPVTLPSFPGGISQ*SLLDSN Trigger: ATTGGAATCGAGGAGCGACAACTGTGATATACCCCC...GGGGAAGCTGGGGAGAGTCACAGGTCTTGACCCTGCAGGCCCTTTATTCAACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| CDS-3UTR CAA 90 bp | TTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTATGCAGGACCCTGAGCTaGTACTTTGGGCCCACTACA | + |
|
Preference number: 5 (lower is better) Translates to: FSIRFPPRWQRIGHRDHLCRTLS*YFGPTT Trigger: TGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCA...TAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCAGGACCCTGAGCTaGTACTTTGGGCCCACTACA | + |
|
Preference number: 5 (lower is better) Translates to: IRFPPRWQRIGHRDHLDACRTLS*YFGPTT Trigger: TGTAGTGGGCCCAAAGTACAAGCTCAGGGTCCTGCA...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | GCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAAGAGCACAGGATAGGTaGGAAGGATGTCTCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: AADSTVGNKWGLGTQPDKRAQDR*EGCLNI Trigger: AATGTTGAGACATCCTTCCAACCTATCCTGTGCTCT...TTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TTCGACAGTGGGGAACAAGTGGGGCCTCGGGACGCAGCCAGACAAAGTGCTTTGTCCAGAGAAGCTCCTTaGACCAACATCTGGTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: FDSGEQVGPRDAARQSALSREAP*TNIWSI Trigger: TATTGACCAGATGTTGGTCAAAGGAGCTTCTCTGGA...CAAAGCACTTTGTCTGGCTGCGTCCCGAGGCCCCACTTGTTCCCCACTGTCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACTCCAGAGAAGCTCCTTaGACCAACATCTGGTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDSREAP*TNIWSI Trigger: TATTGACCAGATGTTGGTCAAAGGAGCTTCTCTGGA...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACTTGGATTCTGTGATATaGCCATCTTCGCCTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDLDSVI*PSSPLS Trigger: ACTGAGAGGCGAAGATGGCAATATCACAGAATCCAA...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTAGAGCACAGGATAGGTaGGAAGGATGTCTCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPRAQDR*EGCLNI Trigger: AATGTTGAGACATCCTTCCAACCTATCCTGTGCTCT...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | GGACGCAGCCAGACAAAGTGCTTTGCTGTAGGGAGCTGGGCTATTTCTGTCTTGGGGGGTATATCACAGTaGTCGCTCCTCGATTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GRSQTKCFAVGSWAISVLGGISQ*SLLDSN Trigger: ATTGGAATCGAGGAGCGACAACTGTGATATACCCCC...CAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | GAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTGCCCCACGGCCCTATCTGGTGGTCACACTaGAAGTACTTTATACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EMAEDWAQGPFRCLPHGPIWWSH*KYFIPP Trigger: TGGAGGTATAAAGTACTTCAAGTGTGACCACCAGAT...AGGGCCGTGGGGCAAGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060673.8 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTATGACAGGCAGCAGATTCGACAGTGGGGAACAAGTGGGGCCTCGGGACATAAAAGTGGTTTTCTaGGTCACATTTAAGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CGMTGSRFDSGEQVGPRDIKVVF*VTFKLP Trigger: GGGGAGCTTAAATGTGACCAAGAAAACCACTTTTAT...GTCCCGAGGCCCCACTTGTTCCCCACTGTCGAATCTGCTGCCTGTCATACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | ATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTTAGATGCTTTGGATTCTGTGATATaGCCATCTTCGCCTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IRFPPRWQRIGHRDHLDALDSVI*PSSPLS Trigger: ACTGAGAGGCGAAGATGGCAATATCACAGAATCCAA...AGCATCTAAATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | CACAGTAGTCCACCCAAGGGACCCAAGGGATTTCCAAACCCTTCACAGCCTGGCATAAAAGTGGTTTTCTaGGTCACATTTAAGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSSPPKGPKGFPNPSQPGIKVVF*VTFKLP Trigger: GGGGAGCTTAAATGTGACCAAGAAAACCACTTTTAT...GCCAGGCTGTGAAGGGTTTGGAAATCCCTTGGGTCCCTTGGGTGGACTACTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | CATTCTCCATTCGGTTCCCGCCGAGATGGCAGAGGATTGGGCACAGGGACCATTATAAAAGTGGTTTTCTaGGTCACATTTAAGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HSPFGSRRDGRGLGTGTIIKVVF*VTFKLP Trigger: GGGGAGCTTAAATGTGACCAAGAAAACCACTTTTAT...AATGGTCCCTGTGCCCAATCCTCTGCCATCTCGGCGGGAACCGAATGGAGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTCTTCCACTTAGCTGCACAGGCCTCAGGGCTATGAGCCCAGCCCAATCCAGAGAAGCTCCTTaGACCAACATCTGGTCAATA | + |
|
Preference number: 5 (lower is better) Translates to: FLFLPLSCTGLRAMSPAQSREAP*TNIWSI Trigger: TATTGACCAGATGTTGGTCAAAGGAGCTTCTCTGGA...TTGGGCTGGGCTCATAGCCCTGAGGCCTGTGCAGCTAAGTGGAAGAAAGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 |
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| CDS-3UTR CAA 90 bp | GAGCAGGGCTCAGTGCACTTAGCATACTCAATCCCAGAGCAGAAAAACAACCTTGGGGGTATATCACAGTaGTCGCTCCTCGATTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EQGSVHLAYSIPEQKNNLGGISQ*SLLDSN Trigger: ATTGGAATCGAGGAGCGACAACTGTGATATACCCCC...AAGGTTGTTTTTCTGCTCTGGGATTGAGTATGCTAAGTGCACTGAGCCCTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| CDS-3UTR CAA 90 bp | GGACGCAGCCAGACAAAGTGCTTTGCTGTAGGGAGCTGGGCTATTTCTGTCTTGATCTGGTGGTCACACTaGAAGTACTTTATACCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRSQTKCFAVGSWAISVLIWWSH*KYFIPP Trigger: TGGAGGTATAAAGTACTTCAAGTGTGACCACCAGAT...CAAGACAGAAATAGCCCAGCTCCCTACAGCAAAGCACTTTGTCTGGCTGCGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060673.8 ENSMUST00000231766.2 |
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| CDS TCA 90 bp | CTCCTCGATTCCAATCAACAACCACTACATTCATCTCTTGTACACTaGTCAAACTCTGTACCAGCTCCTCTATCCAAACCGGAGGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLDSNQQPLHSSLVH*SNSVPAPLSKPEGS Trigger: GCTCCCCTCCGGTTTGGATAGAGGAGCTGGTACAGAGTTTGATCAGTGTACAAGAGATGAATGTAGTGGTTGTTGATTGGAATCGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTCTTCCACTTAGCTGCACAGGCCTCAGGGCTATGAGCCCAGCCCAATCTTCGCCTCTCAGTTaGATTGTAATAAACCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLFLPLSCTGLRAMSPAQSSPLS*IVINPL Trigger: AAGAGGGTTTATTACAATCAAACTGAGAGGCGAAGA...TTGGGCTGGGCTCATAGCCCTGAGGCCTGTGCAGCTAAGTGGAAGAAAGAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 |
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| CDS CCA 90 bp | AATTCCTTCAAAATAGAAGCTACTTGTCTGGTCTTGCTAGACGCATaGGGGTATATCACAGTTGTCGCTCCTCGATTCCAATCAACAACC | + |
|
Preference number: 5 (lower is better) Translates to: NSFKIEATCLVLLDA*GYITVVAPRFQSTT Trigger: GGTTGTTGATTGGAATCGAGGAGCGACAACTGTGATATACCCCCATGCGTCTAGCAAGACCAGACAAGTAGCTTCTATTTTGAAGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | TTCTGTACAGCCCGAGAAATGATCTTGATTATATTTATGGACACCTGCCCATTGTTGGATTCTGTGATATaGCCATCTTCGCCTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FCTAREMILIIFMDTCPLLDSVI*PSSPLS Trigger: ACTGAGAGGCGAAGATGGCAATATCACAGAATCCAA...CAATGGGCAGGTGTCCATAAATATAATCAAGATCATTTCTCGGGCTGTACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060673.8 |
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| CDS-3UTR CAA 90 bp | CTTTACGTAAGAGCCAAACCCTATCAAAAGAAAAGCATGTTCACAGTAGTCCACTCTTCGCCTCTCAGTTaGATTGTAATAAACCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYVRAKPYQKKSMFTVVHSSPLS*IVINPL Trigger: AAGAGGGTTTATTACAATCAAACTGAGAGGCGAAGA...GTGGACTACTGTGAACATGCTTTTCTTTTGATAGGGTTTGGCTCTTACGTAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231766.2 |
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| CDS-3UTR CAA 90 bp | ATCTCGATTAAATCTTGCGAGGAGACTCACTTGATGGTATTTCTCAAATGCAGAATAAAAGTGGTTTTCTaGGTCACATTTAAGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ISIKSCEETHLMVFLKCRIKVVF*VTFKLP Trigger: GGGGAGCTTAAATGTGACCAAGAAAACCACTTTTAT...TCTGCATTTGAGAAATACCATCAAGTGAGTCTCCTCGCAAGATTTAATCGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231682.2 |
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| CDS-3UTR CAA 90 bp | TTGAAAAAGAGAGATTGTGTGTCTTTACGTAAGAGCCAAACCCTATCAAAAGAAATCTGGTGGTCACACTaGAAGTACTTTATACCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKKRDCVSLRKSQTLSKEIWWSH*KYFIPS Trigger: TGACGGTATAAAGTACTTCAAGTGTGACCACCAGAT...TTCTTTTGATAGGGTTTGGCTCTTACGTAAAGACACACAATCTCTCTTTTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074230.12 |
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| CDS CAA 90 bp | AGTTGTCGCTCCTCGATTCCAATCAACAACCACTACATTCATCTCTaGTACACTGATCAAACTCTGTACCAGCTCCTCTATCCAAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: SCRSSIPINNHYIHL*YTDQTLYQLLYPNR Trigger: CCGGTTTGGATAGAGGAGCTGGTACAGAGTTTGATCAGTGTACAAGAGATGAATGTAGTGGTTGTTGATTGGAATCGAGGAGCGACAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS CCA 72 bp | AAAATAGAAGCTACTTGTCTGGTCTTGCTAGACGCATaGGGGTATATCACAGTTGTCGCTCCTCGATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KIEATCLVLLDA*GYITVVAPRFQ Trigger: TTGGAATCGAGGAGCGACAACTGTGATATACCCCCATGCGTCTAGCAAGACCAGACAAGTAGCTTCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS CAA 90 bp | ATCTGGTCAATAAATTCCTTCAAAATAGAAGCTACTTGTCTGGTCTaGCTAGACGCATGGGGGTATATCACAGTTGTCGCTCCTCGATTC | + |
|
Preference number: 6 (lower is better) Translates to: IWSINSFKIEATCLV*LDAWGYITVVAPRF Trigger: GAATCGAGGAGCGACAACTGTGATATACCCCCATGCGTCTAGCAAGACCAGACAAGTAGCTTCTATTTTGAAGGAATTTATTGACCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS CAA 72 bp | TCCTCGATTCCAATCAACAACCACTACATTCATCTCTaGTACACTGATCAAACTCTGTACCAGCTCCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: SSIPINNHYIHL*YTDQTLYQLLY Trigger: ATAGAGGAGCTGGTACAGAGTTTGATCAGTGTACAAGAGATGAATGTAGTGGTTGTTGATTGGAATCGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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| CDS CAA 72 bp | ATAAATTCCTTCAAAATAGAAGCTACTTGTCTGGTCTaGCTAGACGCATGGGGGTATATCACAGTTGTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: INSFKIEATCLV*LDAWGYITVVA Trigger: AGCGACAACTGTGATATACCCCCATGCGTCTAGCAAGACCAGACAAGTAGCTTCTATTTTGAAGGAATTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000060673.8 ENSMUST00000074230.12 ENSMUST00000231682.2 ENSMUST00000231766.2 |
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