Pregenerated sensors for LIPG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053846Ensembl transcript IDs: ENSMUST00000066532.5
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGGCCTCTCCAGGAGAAGTCACAGTTGTCAGGGGAGACAGGATaGGCCCAGCAAGCAAGCTCCTCGTGGGGCTCAAGGCTGAGATCG | + |
|
Preference number: 1 (lower is better) Translates to: HRPLQEKSQLSGETG*AQQASSSWGSRLRS Trigger: CGATCTCAGCCTTGAGCCCCACGAGGAGCTTGCTTGCTGGGCTCATCCTGTCTCCCCTGACAACTGTGACTTCTCCTGGAGAGGCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR GCA 90 bp | GAGACTTGGCTCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTaGTGTTCTGCTAGAGATCAAGGGTGGCCCTCAGAGGAAACGGTT | + |
|
Preference number: 1 (lower is better) Translates to: ETWLHCCGQHARCSA*CSARDQGWPSEETV Trigger: AACCGTTTCCTCTGAGGGCCACCCTTGATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 90 bp | CAAGCAAGCTCCTCGTGGGGCTCAAGGCTGAGATCGTCCATCGAGTaGGTCTTCAGCAGTAACTTTTCCTCCATGTGCGTGGACAGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: QASSSWGSRLRSSIE*VFSSNFSSMCVDSG Trigger: CCCACTGTCCACGCACATGGAGGAAAAGTTACTGCTGAAGACCCACTCGATGGACGATCTCAGCCTTGAGCCCCACGAGGAGCTTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 90 bp | AGGACTCAGCTCTCCAATCTCAAGCTCCCATTACTAAACCCAAGGTaGAAGTCACAGGATGTACAGCCGCGGCTAGCAAGCTTCACATGG | + |
|
Preference number: 1 (lower is better) Translates to: RTQLSNLKLPLLNPR*KSQDVQPRLASFTW Trigger: CCATGTGAAGCTTGCTAGCCGCGGCTGTACATCCTGTGACTTCCACCTTGGGTTTAGTAATGGGAGCTTGAGATTGGAGAGCTGAGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR TCA 90 bp | ACCTTGATATATCATCTAAGCAGGTGGCTGAACTTCCCTAAGCCTTaGCTTGGTAAAACAGGAATAACAGCTGCCCTGCTCCCTGTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: TLIYHLSRWLNFPKP*LGKTGITAALLPVL Trigger: GAGCACAGGGAGCAGGGCAGCTGTTATTCCTGTTTTACCAAGTCAAGGCTTAGGGAAGTTCAGCCACCTGCTTAGATGATATATCAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR GCA 90 bp | TGGAGTTACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTaGTGGGTCCTTAGCTCACCCCCTTCCACTGCCACCTTGATATAT | + |
|
Preference number: 1 (lower is better) Translates to: WSYRKDFINFASRKP*WVLSSPPSTATLIY Trigger: ATATATCAAGGTGGCAGTGGAAGGGGGTGAGCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTAACTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR TCA 90 bp | CCCACCCCGAGTGTGCAGGGCTCTGGACACTCCAGTGCTCACACACAAGCTGGCTCAGGGGAGACAGGATaGGCCCAGCAAGCAAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PTPSVQGSGHSSAHTQAGSGETG*AQQASS Trigger: GGAGCTTGCTTGCTGGGCTCATCCTGTCTCCCCTGA...GCCAGCTTGTGTGTGAGCACTGGAGTGTCCAGAGCCCTGCACACTCGGGGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CCA 90 bp | GTAACCAGCAGAGACTTGGCTCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCCATGTGCGTGGACAGTaGGGTGTGGGTGTGGACGCC | + |
|
Preference number: 2 (lower is better) Translates to: VTSRDLAPLLWPACTVFCHVRGQ*GVGVDA Trigger: GGCGTCCACACCCACACCCCACTGTCCACGCACATG...GCAGAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTCTGCTGGTTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCTGCCCTGCTCCCTGTGCTCTAATTAGGCGGCACACACGCAAGCTGTCAAGTGGGGTGTGGGTGTaGACGCCAGGACTTCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NSCPAPCALIRRHTRKLSSGVWV*TPGLLG Trigger: CCCAAGAAGTCCTGGCGTCCACACCCACACCCCACT...TGACAGCTTGCGTGTGTGCCGCCTAATTAGAGCACAGGGAGCAGGGCAGCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CCA 90 bp | AACAGCTGCCCTGCTCCCTGTGCTCTAATTAGGCGGCACACACGCAAGCTGTCATGCTCACACACAAGCTaGCCTCAGCTTCCTGCGGCG | + |
|
Preference number: 2 (lower is better) Translates to: NSCPAPCALIRRHTRKLSCSHTS*PQLPAA Trigger: CGCCGCAGGAAGCTGAGGCCAGCTTGTGTGTGAGCA...TGACAGCTTGCGTGTGTGCCGCCTAATTAGAGCACAGGGAGCAGGGCAGCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CAA 90 bp | CAACCTTCCACACAGGGCCACTTCAGAGCCTTGTGTTCCCTGATGTaGGACAAAGCCAGTGCTCACCTAGCGACAGGGAGAGTACCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: QPSTQGHFRALCSLM*DKASAHLATGRVPR Trigger: GCGGGGTACTCTCCCTGTCGCTAGGTGAGCACTGGCTTTGTCCAACATCAGGGAACACAAGGCTCTGAAGTGGCCCTGTGTGGAAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAGCTGCCAACCTTCCACACAGGGCCACTTCAGAGCCTTGTGTTCCCTGATGAGTGTGCAGGGCTCTaGACACTCCAGTGCTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: RQLPTFHTGPLQSLVFPDECAGL*TLQCSH Trigger: GTGTGAGCACTGGAGTGTCCAGAGCCCTGCACACTC...ATCAGGGAACACAAGGCTCTGAAGTGGCCCTGTGTGGAAGGTTGGCAGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CCA 90 bp | GCCTCAGCTTCCTGCGGCGGCAACAAAGGTTTACAGCTAGAATCATCAGCAAGAGTGGACAGTGGGGTGTaGGTGTGGACGCCAGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: ASASCGGNKGLQLESSARVDSGV*VWTPGL Trigger: AAGTCCTGGCGTCCACACCCACACCCCACTGTCCAC...TCTTGCTGATGATTCTAGCTGTAAACCTTTGTTGCCGCCGCAGGAAGCTGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTGCTGTTCTGCTAGAGATCAGATTCCAGGGATCCTaGTCTCGCTGGCTCCAAATG | + |
|
Preference number: 2 (lower is better) Translates to: STAVASMHGVLLAVLLEIRFQGS*SRWLQM Trigger: CATTTGGAGCCAGCGAGACCAGGATCCCTGGAATCT...GATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCCCCTGCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTGCAGACATGTGAGGCCAGGCAGCTaGCAACCTTCCACACAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KSPAYHIRNIWVGNSCRHVRPGS*QPSTQG Trigger: GCCCTGTGTGGAAGGTTGGCAGCTGCCTGGCCTCAC...ATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGCAGGGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGAATAGAACCAGGATCCATCAGTACCTCGTGTGGGAGGGCAGCAGCCCCAAGATCGTCCATCGAGTaGGTCTTCAGCAGTAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: PRIEPGSISTSCGRAAAPRSSIE*VFSSNF Trigger: AAAGTTACTGCTGAAGACCCACTCGATGGACGATCT...TGGGGCTGCTGCCCTCCCACACGAGGTACTGATGGATCCTGGTTCTATTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR TCA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCCGTGGGGCTCAAGGCTaGGATCGTCCATCGAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: YRKDFINFASRKPCWVLSRGAQG*DRPSSG Trigger: CCCACTCGATGGACGATCTCAGCCTTGAGCCCCACG...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGGGCACTCTGTGTGAAGGGTCAACTGGTTACGTCATCAGAACTTTGGCATGTTGGACAAAGCCAGTaGTCACCTAGCGACAGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ERALCVKGQLVTSSELWHVGQSQ*SPSDRE Trigger: CTCCCTGTCGCTAGGTGAGCACTGGCTTTGTCCAAC...ATGCCAAAGTTCTGATGACGTAACCAGTTGACCCTTCACACAGAGTGCCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCCCCTGCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTGCAGACATCAAGAACTTCAGCAGTaGACAGGCCTCTCCAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KSPAYHIRNIWVGNSCRHQELQQ*TGLSRR Trigger: TCTCCTGGAGAGGCCTGTGCACTGCTGAAGTTCTTG...ATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGCAGGGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGGCCAGCATGCACGGTGTTCTGCTTGCTGTTCTGCTAGAGATCAAGGGTGGCGCTAATGAGCTGAAGTaGCCAATAAATGTTTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VASMHGVLLAVLLEIKGGANELK*PINVCS Trigger: TGAACAAACATTTATTGGGCACTTCAGCTCATTAGC...GCCACCCTTGATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGGGCACTCTGTGTGAAGGGTCAACTGGTTACGTCATCAGAACTTTGGCATCTCTGGAAGGCAGGATaGAATACCCAGAATAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: ERALCVKGQLVTSSELWHLWKAG*NTQNRT Trigger: GGTTCTATTCTGGGTATTTCATCCTGCCTTCCAGAG...ATGCCAAAGTTCTGATGACGTAACCAGTTGACCCTTCACACAGAGTGCCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCAACTTTTCCTCCATGTaGGTGGACAGTGGGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YRKDFINFASRKPCWVLSNFSSM*VDSGVW Trigger: CCACACCCCACTGTCCACGCACATGGAGGAAAAGTT...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGTCCCCTGCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTGCAGACATGAAATGCCAACGATGTaGACTTCAGAAGGTGCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KSPAYHIRNIWVGNSCRHEMPTM*TSEGAL Trigger: CAGAGCACCTTCTGAAGTTCACATCGTTGGCATTTC...ATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGCAGGGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR GCA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCGTGAACTTCAGAAGGTaGTCTGGAAGGCAGGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: YRKDFINFASRKPCWVLSVNFRR*SGRQDE Trigger: TTCATCCTGCCTTCCAGAGCACCTTCTGAAGTTCAC...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGGGCACTCTGTGTGAAGGGTCAACTGGTTACGTCATCAGAACTTTGGCATAACTTCCCTAAGCCTTaGCTTGGTAAAACAGGAATA | + |
|
Preference number: 2 (lower is better) Translates to: ERALCVKGQLVTSSELWHNFPKP*LGKTGI Trigger: TATTCCTGTTTTACCAAGTCAAGGCTTAGGGAAGTT...ATGCCAAAGTTCTGATGACGTAACCAGTTGACCCTTCACACAGAGTGCCCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | GCAGGGCTCTGGACACTCCAGTGCTCACACACAAGCTaGCCTCAGCTTCCTGCGGCGGCAACAAAGGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: AGLWTLQCSHTS*PQLPAAATKVY Trigger: GTAAACCTTTGTTGCCGCCGCAGGAAGCTGAGGCCAGCTTGTGTGTGAGCACTGGAGTGTCCAGAGCCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | ACCCAGAATAGAACCAGGATCCATCAGTACCTCGTGTaGGAGGGCAGCAGCCCCAGCCTGGTCTACAGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: TQNRTRIHQYLV*EGSSPSLVYSP Trigger: GGGACTGTAGACCAGGCTGGGGCTGCTGCCCTCCCACACGAGGTACTGATGGATCCTGGTTCTATTCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCAGAGACTTGGCTCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTGCCCTGTAGCCCTCGCCTaGATCCCATCTGTCTTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: PAETWLHCCGQHARCSACPVALA*IPSVFN Trigger: GTTAAAGACAGATGGGATCAAGGCGAGGGCTACAGG...GCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTCTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR TCA 72 bp | GAGCCCAGCAAGCAAGCTCCTCGTGGGGCTCAAGGCTaGGATCGTCCATCGAGTGGGTCTTCAGCAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: EPSKQAPRGAQG*DRPSSGSSAVT Trigger: AGTTACTGCTGAAGACCCACTCGATGGACGATCTCAGCCTTGAGCCCCACGAGGAGCTTGCTTGCTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR TCA 72 bp | CAGCTCCTGAGGCAAAGACTTGTCACTAAGGTTCAGTaGGGCCAGGCAGCTGCCAACCTTCCACACAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QLLRQRLVTKVQ*GQAAANLPHRA Trigger: GGCCCTGTGTGGAAGGTTGGCAGCTGCCTGGCCTCACTGAACCTTAGTGACAAGTCTTTGCCTCAGGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR GCA 72 bp | CTCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTaGTGTTCTGCTAGAGATCAAGGGTGGCCCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHCCGQHARCSA*CSARDQGWPSE Trigger: CTCTGAGGGCCACCCTTGATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | GCAGCAGCCCCAGCCTGGTCTACAGTCCCCTCTCTATaGCATGAGTCAGCTCCTGAGGCAAAGACTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AAAPAWSTVPSL*HESAPEAKTCH Trigger: GTGACAAGTCTTTGCCTCAGGAGCTGACTCATGCCATAGAGAGGGGACTGTAGACCAGGCTGGGGCTGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | AGCTCCGTAACCAGCAGAGACTTGGCTCCACTGCTGTaGCCAGCATGCACGGTGTTCTGCTTGCTGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSVTSRDLAPLL*PACTVFCLLFC Trigger: GCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTCTGCTGGTTACGGAGCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | TCCTCGTGGGGCTCAAGGCTGAGATCGTCCATCGAGTaGGTCTTCAGCAGTAACTTTTCCTCCATGTGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSWGSRLRSSIE*VFSSNFSSMCV Trigger: CACGCACATGGAGGAAAAGTTACTGCTGAAGACCCACTCGATGGACGATCTCAGCCTTGAGCCCCACGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR GCA 72 bp | ACTCCAGTGCTCACACACAAGCTGGCCTCAGCTTCCTaGGGCGGCAACAAAGGTTTACAGCTAGAATCATCA | + |
|
Preference number: 3 (lower is better) Translates to: TPVLTHKLASAS*GGNKGLQLESS Trigger: TGATGATTCTAGCTGTAAACCTTTGTTGCCGCCGCAGGAAGCTGAGGCCAGCTTGTGTGTGAGCACTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | TCAGGGGCCAGTGAACTTGAGAGATTCCAGGGATCCTaGTCTCGCTGGCTCCAAATGCTGAAGTTGAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SGASELERFQGS*SRWLQMLKLSH Trigger: ATGACTCAACTTCAGCATTTGGAGCCAGCGAGACCAGGATCCCTGGAATCTCTCAAGTTCACTGGCCCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | CTCTCCAATCTCAAGCTCCCATTACTAAACCCAAGGTaGAAGTCACAGGATGTACAGCCGCGGCTAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSNLKLPLLNPR*KSQDVQPRLAS Trigger: GCTTGCTAGCCGCGGCTGTACATCCTGTGACTTCCACCTTGGGTTTAGTAATGGGAGCTTGAGATTGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR GCA 72 bp | AGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTaGTGGGTCCTTAGCTCACCCCCTTCCACTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: RKDFINFASRKP*WVLSSPPSTAT Trigger: GGTGGCAGTGGAAGGGGGTGAGCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CCA 72 bp | AAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTaGGTCCTTAGCTCACCCCCTTCCACTGCCACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KDFINFASRKPC*VLSSPPSTATL Trigger: CAAGGTGGCAGTGGAAGGGGGTGAGCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCGGCCACTTCAGAGCCTaGTGTTCCCTGATGTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: YRKDFINFASRKPCWVLSGHFRA*CSLMLD Trigger: GTCCAACATCAGGGAACACAAGGCTCTGAAGTGGCC...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CAA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCTTGTGTTCCCTGATGTaGGACAAAGCCAGTGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YRKDFINFASRKPCWVLSLCSLM*DKASAH Trigger: GTGAGCACTGGCTTTGTCCAACATCAGGGAACACAA...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR TCA 72 bp | CGATGTGAACTTCAGAAGGTGCTCTGGAAGGCAGGATaGAATACCCAGAATAGAACCAGGATCCATCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RCELQKVLWKAG*NTQNRTRIHQY Trigger: GTACTGATGGATCCTGGTTCTATTCTGGGTATTTCATCCTGCCTTCCAGAGCACCTTCTGAAGTTCACATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR TCA 72 bp | TATCATCTAAGCAGGTGGCTGAACTTCCCTAAGCCTTaGCTTGGTAAAACAGGAATAACAGCTGCCCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: YHLSRWLNFPKP*LGKTGITAALL Trigger: GAGCAGGGCAGCTGTTATTCCTGTTTTACCAAGTCAAGGCTTAGGGAAGTTCAGCCACCTGCTTAGATGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR GCA 72 bp | GCTGACAGCACACCCACAAAAACGCAACCGTTCTTCTaGTTGTATCTTAAGAAAGGGCTTGGATTTTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: ADSTPTKTQPFF*LYLKKGLGFYG Trigger: TCCATAAAATCCAAGCCCTTTCTTAAGATACAAGCAGAAGAACGGTTGCGTTTTTGTGGGTGTGCTGTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCCCCTGCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTGCAGACATCTCCAAATGCTGAAGTaGAGTCATGTGTCTATACAT | + |
|
Preference number: 3 (lower is better) Translates to: KSPAYHIRNIWVGNSCRHLQMLK*SHVSIH Trigger: ATGTATAGACACATGACTCAACTTCAGCATTTGGAG...ATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGCAGGGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR GCA 72 bp | GCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTaGAGACATCTTTATGGAGTTACAGAAAGGATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AYHIRNIWVGNS*RHLYGVTERIS Trigger: TGAAATCCTTTCTGTAACTCCATAAAGATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR TCA 90 bp | CCCACCCCGAGTGTGCAGGGCTCTGGACACTCCAGTGCTCACACACAAGCTGGCAAGCTGGGCTTGTCCTaGTTCACCAGAGAGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: PTPSVQGSGHSSAHTQAGKLGLS*FTREST Trigger: TGTCGACTCTCTGGTGAATCAGGACAAGCCCAGCTT...GCCAGCTTGTGTGTGAGCACTGGAGTGTCCAGAGCCCTGCACACTCGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGCCCTGCTCCCTGTGCTCTAATTAGGCGGCACACACGCAAGCTGTCACCACCCCTTCAAACATaGGACCCGCGGGATCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NSCPAPCALIRRHTRKLSPPLQT*DPRDPD Trigger: GTCTGGATCCCGCGGGTCCCATGTTTGAAGGGGTGG...TGACAGCTTGCGTGTGTGCCGCCTAATTAGAGCACAGGGAGCAGGGCAGCTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | GTAACCAGCAGAGACTTGGCTCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCCCTGGCCAGGGGAGATaGTACTCTTCGTTGGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSRDLAPLLWPACTVFCPGQGR*YSSLGL Trigger: AAGACCCAACGAAGAGTAGCATCTCCCCTGGCCAGG...GCAGAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTCTGCTGGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CAA 72 bp | CCTGCAGTACCGTATAGCTCCGTAACCAGCAGAGACTaGGCTCCACTGCTGTGGCCAGCATGCACGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PAVPYSSVTSRD*APLLWPACTVF Trigger: GAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTCTGCTGGTTACGGAGCTATACGGTACTGCAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | CCCACCCCGAGTGTGCAGGGCTCTGGACACTCCAGTGCTCACACACAAGCTGGCGTTGAGACAGGTAGTTaGGAAACTCATTCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPSVQGSGHSSAHTQAGVETGS*ETHSTG Trigger: ACCTGTGGAATGAGTTTCGCAACTACCTGTCTCAAC...GCCAGCTTGTGTGTGAGCACTGGAGTGTCCAGAGCCCTGCACACTCGGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | AACAGCTGCCCTGCTCCCTGTGCTCTAATTAGGCGGCACACACGCAAGCTGTCAAGGTTGTACCAGGAATaGGCTACCCCCTCCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NSCPAPCALIRRHTRKLSRLYQE*ATPSQV Trigger: TACCTGGGAGGGGGTAGCCCATTCCTGGTACAACCT...TGACAGCTTGCGTGTGTGCCGCCTAATTAGAGCACAGGGAGCAGGGCAGCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CAA 72 bp | ACACAGGGCCACTTCAGAGCCTTGTGTTCCCTGATGTaGGACAAAGCCAGTGCTCACCTAGCGACAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQGHFRALCSLM*DKASAHLATGR Trigger: TCTCCCTGTCGCTAGGTGAGCACTGGCTTTGTCCAACATCAGGGAACACAAGGCTCTGAAGTGGCCCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CAA 72 bp | AGCTGCCAACCTTCCACACAGGGCCACTTCAGAGCCTaGTGTTCCCTGATGTTGGACAAAGCCAGTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SCQPSTQGHFRA*CSLMLDKASAH Trigger: GTGAGCACTGGCTTTGTCCAACATCAGGGAACACAAGGCTCTGAAGTGGCCCTGTGTGGAAGGTTGGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGAGACTTGGCTCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTGCCTCTTCGTTGGGTCTTaGGTGCAAAATGTCACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAETWLHCCGQHARCSACLFVGS*VQNVTL Trigger: CAAAGTGACATTTTGCACTCAAGACCCAACGAAGAG...GCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTCTGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | AACAGCTGCCCTGCTCCCTGTGCTCTAATTAGGCGGCACACACGCAAGCTGTCAGCCAGCTCTCAAACATaGCACTCATCGTCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSCPAPCALIRRHTRKLSASSQT*HSSSIH Trigger: ATGGATGGACGATGAGTGGCATGTTTGAGAGCTGGC...TGACAGCTTGCGTGTGTGCCGCCTAATTAGAGCACAGGGAGCAGGGCAGCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | AGGCAGCTGCCAACCTTCCACACAGGGCCACTTCAGAGCCTTGTGTTCCCTGATAACTCTTCCTTCTCCTaGAGCCAGTCAAGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLPTFHTGPLQSLVFPDNSSFS*SQSSIP Trigger: TGGGATGCTTGACTGGCTGCAGGAGAAGGAAGAGTT...ATCAGGGAACACAAGGCTCTGAAGTGGCCCTGTGTGGAAGGTTGGCAGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTGCCAACCTTCCACACAGGGCCACTTCAGAGCCTTGTGTTCCCTGATATTGAATCCACAGCCTaGCTGGAAGTCACCGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: RQLPTFHTGPLQSLVFPDIESTA*LEVTAI Trigger: AATGGCGGTGACTTCCAGCCAGGCTGTGGATTCAAT...ATCAGGGAACACAAGGCTCTGAAGTGGCCCTGTGTGGAAGGTTGGCAGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCAGAGACTTGGCTCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTGCCTCATCGTCCATCCATaGATGATGAAGAAGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAETWLHCCGQHARCSACLIVHP*MMKKVL Trigger: CAAAACCTTCTTCATCATTCATGGATGGACGATGAG...GCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGAGCCAAGTCTCTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR TCA 90 bp | TGCTGTTCTGCTAGAGATCAAGGGTGGCCCTCAGAGGAAACGGTTCATAAAAGCGGCAGATTCCCCTTTTaGAGCGGCTGGAGTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCSARDQGWPSEETVHKSGRFPF*SGWSLC Trigger: GCACAGACTCCAGCCGCTTCAAAAGGGGAATCTGCC...GCTTTTATGAACCGTTTCCTCTGAGGGCCACCCTTGATCTCTAGCAGAACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | GCCTCAGCTTCCTGCGGCGGCAACAAAGGTTTACAGCTAGAATCATCAGCAAGACTGGAGTCTGTGCACTaGAAGGCAAAGCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ASASCGGNKGLQLESSARLESVH*KAKLGL Trigger: CAAGCCCAGCTTTGCCTTCCAGTGCACAGACTCCAG...TCTTGCTGATGATTCTAGCTGTAAACCTTTGTTGCCGCCGCAGGAAGCTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGAATAGAACCAGGATCCATCAGTACCTCGTGTGGGAGGGCAGCAGCCCCAAATGTCACTTTGCGCTaGGTTTCCCCAGATTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PRIEPGSISTSCGRAAAPNVTLR*VSPDLT Trigger: TGTCAAATCTGGGGAAACCCAGCGCAAAGTGACATT...TGGGGCTGCTGCCCTCCCACACGAGGTACTGATGGATCCTGGTTCTATTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| 3UTR CAA 72 bp | TGCTGGGTCCTTAGCTCACCCCCTTCCACTGCCACCTaGATATATCATCTAAGCAGGTGGCTGAACTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CWVLSSPPSTAT*IYHLSRWLNFP Trigger: AGGGAAGTTCAGCCACCTGCTTAGATGATATATCAAGGTGGCAGTGGAAGGGGGTGAGCTAAGGACCCAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | CCCAGAATAGAACCAGGATCCATCAGTACCTCGTGTGGGAGGGCAGCAGCCCCAAGTTTTCTAAGAGTTTaGTGTCACCAAGGGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PRIEPGSISTSCGRAAAPSFLRV*CHQGRD Trigger: ATCTCTCCCTTGGTGACAGCAAACTCTTAGAAAACT...TGGGGCTGCTGCCCTCCCACACGAGGTACTGATGGATCCTGGTTCTATTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCTGCCAACCTTCCACACAGGGCCACTTCAGAGCCTTGTGTTCCCTGATCAAGGAAGGTGTTTGTaGCATTCAGCTCAATCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQLPTFHTGPLQSLVFPDQGRCL*HSAQSS Trigger: AGAAGATTGAGCTGAATGCCACAAACACCTTCCTTG...ATCAGGGAACACAAGGCTCTGAAGTGGCCCTGTGTGGAAGGTTGGCAGCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | AAGTCCCCTGCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTGCAGACATCCCTCGAGGGGTTGCTaGGTTGAGACAGGTAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSPAYHIRNIWVGNSCRHPSRGC*VETGSC Trigger: GCAACTACCTGTCTCAACCCAGCAACCCCTCGAGGG...ATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGCAGGGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGCACTCTGTGTGAAGGGTCAACTGGTTACGTCATCAGAACTTTGGCATCCACCCTGGTGTTATTaGCTGCATCCGTGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERALCVKGQLVTSSELWHPPWCY*LHPCTA Trigger: AGCTGTACACGGATGCAGTCAATAACACCAGGGTGG...ATGCCAAAGTTCTGATGACGTAACCAGTTGACCCTTCACACAGAGTGCCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | AACAGCTGCCCTGCTCCCTGTGCTCTAATTAGGCGGCACACACGCAAGCTGTCATCTTTCTCTCTCATCTaGAGGGCTGATACAAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NSCPAPCALIRRHTRKLSSFSLI*RADTSL Trigger: TAAACTTGTATCAGCCCTGCAGATGAGAGAGAAAGA...TGACAGCTTGCGTGTGTGCCGCCTAATTAGAGCACAGGGAGCAGGGCAGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | GAAAGGGCACTCTGTGTGAAGGGTCAACTGGTTACGTCATCAGAACTTTGGCATGTATCCAGCCACGTGTaGTCCAAGGCTGTAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERALCVKGQLVTSSELWHVSSHV*SKAVAN Trigger: ATTGGCTACAGCCTTGGAGCACACGTGGCTGGATAC...ATGCCAAAGTTCTGATGACGTAACCAGTTGACCCTTCACACAGAGTGCCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | AAGTCCCCTGCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTGCAGACATAATCCACAGCCTGGCTaGAAGTCACCGCCATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPAYHIRNIWVGNSCRHNPQPG*KSPPLG Trigger: TCCCAATGGCGGTGACTTCCAGCCAGGCTGTGGATT...ATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGCAGGGGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCGACATCCACAAAGTCTaGATCGTCCGGGGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YRKDFINFASRKPCWVLSDIHKV*IVRGQP Trigger: AGGCTGTCCCCGGACGATGCAGACTTTGTGGATGTC...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGCTTCCTGCGGCGGCAACAAAGGTTTACAGCTAGAATCATCAGCAAGATCGTTGGGTCTTGAGTaGAAAATGTCACTTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASASCGGNKGLQLESSARSLGLE*KMSLCA Trigger: AGCGCAAAGTGACATTTTGCACTCAAGACCCAACGA...TCTTGCTGATGATTCTAGCTGTAAACCTTTGTTGCCGCCGCAGGAAGCTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | GAAAGGGCACTCTGTGTGAAGGGTCAACTGGTTACGTCATCAGAACTTTGGCATACTGGAAGGCAAAGCTaGGCTTGTCCTGATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ERALCVKGQLVTSSELWHTGRQS*ACPDSP Trigger: TGGTGAATCAGGACAAGCCCAGCTTTGCCTTCCAGT...ATGCCAAAGTTCTGATGACGTAACCAGTTGACCCTTCACACAGAGTGCCCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | GTGGCCAGCATGCACGGTGTTCTGCTTGCTGTTCTGCTAGAGATCAAGGGTGGCTCTTTCTCATTTTCTTaGCGTTGTAGCCAATGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VASMHGVLLAVLLEIKGGSFSFS*RCSQCY Trigger: ATAACATTGGCTACAACGCCAAGAAAATGAGAAAGA...GCCACCCTTGATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CCA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCGGAAGTCACCGCCATTaGGATAGATGTCAATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YRKDFINFASRKPCWVLSGSHRH*DRCQCD Trigger: GTCACATTGACATCTATCCCAATGGCGGTGACTTCC...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR GCA 90 bp | TACAGAAAGGATTTCATAAACTTTGCCTCCAGGAAACCTTGCTGGGTCCTTAGCTGCAAAATGTCACTTTaGGCTGGGTTTCCCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: YRKDFINFASRKPCWVLSCKMSL*AGFPQI Trigger: AATCTGGGGAAACCCAGCGCAAAGTGACATTTTGCA...GCTAAGGACCCAGCAAGGTTTCCTGGAGGCAAAGTTTATGAAATCCTTTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 90 bp | GCAGGACATCCACAAAGTCTGCATCGTCCGGGGACAGCCTTCTGTTaGTGTCCACCCCTTCAAACATGGGACCCGCGGGATCCAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGHPQSLHRPGTAFC*CPPLQTWDPRDPDQ Trigger: CTGGTCTGGATCCCGCGGGTCCCATGTTTGAAGGGGTGGACATCAACAGAAGGCTGTCCCCGGACGATGCAGACTTTGTGGATGTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 90 bp | AAGCATCCCAGCTACTCTCTGTCCCACCACCCTGGTGTTATTGACTaGATCCGTGTACAGCTGATGAGCCAGGGGCAGCCAGTCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KHPSYSLSHHPGVID*IRVQLMSQGQPVNH Trigger: GTGGTTGACTGGCTGCCCCTGGCTCATCAGCTGTACACGGATGCAGTCAATAACACCAGGGTGGTGGGACAGAGAGTAGCTGGGATGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 90 bp | AGTCAAGCATCCCAGCTACTCTCTGTCCCACCACCCTGGTGTTATTaGCTGCATCCGTGTACAGCTGATGAGCCAGGGGCAGCCAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SQASQLLSVPPPWCY*LHPCTADEPGAASQ Trigger: TTGACTGGCTGCCCCTGGCTCATCAGCTGTACACGGATGCAGTCAATAACACCAGGGTGGTGGGACAGAGAGTAGCTGGGATGCTTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 90 bp | GGATGTACAGCTCCCTCGAGGGGTTGCTGGGTTGAGACAGGTAGTTaGGAAACTCATTCCACAGGTTGTACCAGGAATGGGCTACCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCTAPSRGCWVETGS*ETHSTGCTRNGLPP Trigger: AGGGGGTAGCCCATTCCTGGTACAACCTGTGGAATGAGTTTCGCAACTACCTGTCTCAACCCAGCAACCCCTCGAGGGAGCTGTACATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CAA 90 bp | TCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTGCTGTTCTGCTAGAGATCGATCCGATGACATCATaGAATCCACAGCCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: STAVASMHGVLLAVLLEIDPMTS*NPQPGW Trigger: CCAGCCAGGCTGTGGATTCAATGATGTCATCGGATC...GATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 90 bp | CAAGCCAAAGGACAGCGTGTAGGTATGCAGGACATCCACAAAGTCTaGATCGTCCGGGGACAGCCTTCTGTTGATGTCCACCCCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QAKGQRVGMQDIHKV*IVRGQPSVDVHPFK Trigger: TTTGAAGGGGTGGACATCAACAGAAGGCTGTCCCCGGACGATGCAGACTTTGTGGATGTCCTGCATACCTACACGCTGTCCTTTGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 90 bp | AGCCATCCTGACACTTGTGAAACCACAGCTCCTGGCCAGGGGAGATaGTACTCTTCGTTGGGTCTTGAGTGCAAAATGTCACTTTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHPDTCETTAPGQGR*YSSLGLECKMSLCA Trigger: AGCGCAAAGTGACATTTTGCACTCAAGACCCAACGAAGAGTAGCATCTCCCCTGGCCAGGAGCTGTGGTTTCACAAGTGTCAGGATGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CAA 90 bp | GCCTCAGCTTCCTGCGGCGGCAACAAAGGTTTACAGCTAGAATCATCAGCAAGAACCACCCTGGTGTTATaGACTGCATCCGTGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASASCGGNKGLQLESSARTTLVL*TASVYS Trigger: GCTGTACACGGATGCAGTCAATAACACCAGGGTGGT...TCTTGCTGATGATTCTAGCTGTAAACCTTTGTTGCCGCCGCAGGAAGCTGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CAA 90 bp | GTGGCCAGCATGCACGGTGTTCTGCTTGCTGTTCTGCTAGAGATCAAGGGTGGCAGACAAGGAAGGTGTTaGTGGCATTCAGCTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VASMHGVLLAVLLEIKGGRQGRC*WHSAQS Trigger: AGATTGAGCTGAATGCCACAAACACCTTCCTTGTCT...GCCACCCTTGATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGTTCTGCTAGAGATCAAGGGTGGCCCTCAGAGGAAACGGTTCATAAAAGCCGAGGGGTTGCTGGGTaGAGACAGGTAGTTGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCSARDQGWPSEETVHKSRGVAG*RQVVAK Trigger: TTTCGCAACTACCTGTCTCAACCCAGCAACCCCTCG...GCTTTTATGAACCGTTTCCTCTGAGGGCCACCCTTGATCTCTAGCAGAACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 90 bp | CATTGGGATAGATGTCAATGTGACCCACAGGCATCCGAATCCCAATaGTCAAGCCAAAGGACAGCGTGTAGGTATGCAGGACATCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: HWDRCQCDPQASESQ*SSQRTACRYAGHPQ Trigger: TTGTGGATGTCCTGCATACCTACACGCTGTCCTTTGGCTTGAGCATTGGGATTCGGATGCCTGTGGGTCACATTGACATCTATCCCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 90 bp | GTCAACCACCACGACGTTAGCATCTTTCTCTCTCATCTGCAGGGCTaGTACAAGTTTATGCAGCCAGCTCTCAAACATGCCACTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: VNHHDVSIFLSHLQG*YKFMQPALKHATHR Trigger: ACGATGAGTGGCATGTTTGAGAGCTGGCTGCATAAACTTGTATCAGCCCTGCAGATGAGAGAGAAAGATGCTAACGTCGTGGTGGTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 90 bp | AGAGATCGCCCAAGTCCTCCTCAGTGTAGACAAGGAAGGTGTTTGTaGCATTCAGCTCAATCTTCTCCACTATTTCCAAGGGCAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDRPSPPQCRQGRCL*HSAQSSPLFPRAGS Trigger: AGAACCTGCCCTTGGAAATAGTGGAGAAGATTGAGCTGAATGCCACAAACACCTTCCTTGTCTACACTGAGGAGGACTTGGGCGATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CAA 90 bp | AAGTCCCCTGCTTATCACATCAGGAACATCTGGGTAGGAAATAGCTGCAGACATGTTCCTTTCACAAAGTaGCCAGCGTATCCAGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: KSPAYHIRNIWVGNSCRHVPFTK*PAYPAT Trigger: CGTGGCTGGATACGCTGGCAACTTTGTGAAAGGAAC...ATGTCTGCAGCTATTTCCTACCCAGATGTTCCTGATGTGATAAGCAGGGGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CAA 90 bp | TCCACTGCTGTGGCCAGCATGCACGGTGTTCTGCTTGCTGTTCTGCTAGAGATCTCACCATCTCTGAGATaGTTCCATATGCAAAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: STAVASMHGVLLAVLLEISPSLR*FHMQKI Trigger: GATCTTTTGCATATGGAACAATCTCAGAGATGGTGA...GATCTCTAGCAGAACAGCAAGCAGAACACCGTGCATGCTGGCCACAGCAGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS-3UTR CAA 90 bp | GAAAGGGCACTCTGTGTGAAGGGTCAACTGGTTACGTCATCAGAACTTTGGCATGTGCAAAATGTCACTTaGCGCTGGGTTTCCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ERALCVKGQLVTSSELWHVQNVT*RWVSPD Trigger: ATCTGGGGAAACCCAGCGCAAAGTGACATTTTGCAC...ATGCCAAAGTTCTGATGACGTAACCAGTTGACCCTTCACACAGAGTGCCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 90 bp | TTTTCTAAGAGTTTGCTGTCACCAAGGGAGAGATTACACCCTTCCTaGTCTGGGTCCTTAGAAGTGCGGATGTTAAAAGCCACAGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSKSLLSPRERLHPS*SGSLEVRMLKATEG Trigger: ACCCTCTGTGGCTTTTAACATCCGCACTTCTAAGGACCCAGAGCAGGAAGGGTGTAATCTCTCCCTTGGTGACAGCAAACTCTTAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 90 bp | TGTTCCATATGCAAAAGATCCGATGACATCATTGAATCCACAGCCTaGCTGGAAGTCACCGCCATTGGGATAGATGTCAATGTGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSICKRSDDIIESTA*LEVTAIGIDVNVTH Trigger: GTGGGTCACATTGACATCTATCCCAATGGCGGTGACTTCCAGCCAGGCTGTGGATTCAATGATGTCATCGGATCTTTTGCATATGGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 90 bp | AGTTTATGCAGCCAGCTCTCAAACATGCCACTCATCGTCCATCCATaGATGATGAAGAAGGTTTTGGCTGTCATGTTGAAGCCACAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLCSQLSNMPLIVHP*MMKKVLAVMLKPQF Trigger: AAACTGTGGCTTCAACATGACAGCCAAAACCTTCTTCATCATTCATGGATGGACGATGAGTGGCATGTTTGAGAGCTGGCTGCATAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 90 bp | TATTGTAAGAGAACATGTGAACTTTCAGCTGGTAATGGTAAACTTTaGAAGGCATGCCAGCCCGGGTTTTTAAATACATTTTGCTATTCC | + |
|
Preference number: 5 (lower is better) Translates to: YCKRTCELSAGNGKL*KACQPGFLNTFCYS Trigger: GGAATAGCAAAATGTATTTAAAAACCCGGGCTGGCATGCCTTTCAAAGTTTACCATTACCAGCTGAAAGTTCACATGTTCTCTTACAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CAA 90 bp | TGCAGGACATCCACAAAGTCTGCATCGTCCGGGGACAGCCTTCTGTaGATGTCCACCCCTTCAAACATGGGACCCGCGGGATCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: CRTSTKSASSGDSLL*MSTPSNMGPAGSRP Trigger: TGGTCTGGATCCCGCGGGTCCCATGTTTGAAGGGGTGGACATCAACAGAAGGCTGTCCCCGGACGATGCAGACTTTGTGGATGTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 72 bp | CCACAAAGTCTGCATCGTCCGGGGACAGCCTTCTGTTaGTGTCCACCCCTTCAAACATGGGACCCGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PQSLHRPGTAFC*CPPLQTWDPRD Trigger: ATCCCGCGGGTCCCATGTTTGAAGGGGTGGACATCAACAGAAGGCTGTCCCCGGACGATGCAGACTTTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CAA 72 bp | TCCACAAAGTCTGCATCGTCCGGGGACAGCCTTCTGTaGATGTCCACCCCTTCAAACATGGGACCCGCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: STKSASSGDSLL*MSTPSNMGPAG Trigger: TCCCGCGGGTCCCATGTTTGAAGGGGTGGACATCAACAGAAGGCTGTCCCCGGACGATGCAGACTTTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 72 bp | TCCCAGCTACTCTCTGTCCCACCACCCTGGTGTTATTaGCTGCATCCGTGTACAGCTGATGAGCCAGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SQLLSVPPPWCY*LHPCTADEPGA Trigger: TGCCCCTGGCTCATCAGCTGTACACGGATGCAGTCAATAACACCAGGGTGGTGGGACAGAGAGTAGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | AGCTACTCTCTGTCCCACCACCCTGGTGTTATTGACTaGATCCGTGTACAGCTGATGAGCCAGGGGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SYSLSHHPGVID*IRVQLMSQGQP Trigger: TGGCTGCCCCTGGCTCATCAGCTGTACACGGATGCAGTCAATAACACCAGGGTGGTGGGACAGAGAGTAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | GGACAGCGTGTAGGTATGCAGGACATCCACAAAGTCTaGATCGTCCGGGGACAGCCTTCTGTTGATGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GQRVGMQDIHKV*IVRGQPSVDVH Trigger: GTGGACATCAACAGAAGGCTGTCCCCGGACGATGCAGACTTTGTGGATGTCCTGCATACCTACACGCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | GCTCCCTCGAGGGGTTGCTGGGTTGAGACAGGTAGTTaGGAAACTCATTCCACAGGTTGTACCAGGAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: APSRGCWVETGS*ETHSTGCTRNG Trigger: CCCATTCCTGGTACAACCTGTGGAATGAGTTTCGCAACTACCTGTCTCAACCCAGCAACCCCTCGAGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | CACGAATTCGCCGGATGTACAGCTCCCTCGAGGGGTTaGTGGGTTGAGACAGGTAGTTGCGAAACTCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: HEFAGCTAPSRG*WVETGSCETHS Trigger: GGAATGAGTTTCGCAACTACCTGTCTCAACCCAGCAACCCCTCGAGGGAGCTGTACATCCGGCGAATTCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 72 bp | CCACAGCTCCTGGCCAGGGGAGATGCTACTCTTCGTTaGGTCTTGAGTGCAAAATGTCACTTTGCGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PQLLARGDATLR*VLSAKCHFALG Trigger: ACCCAGCGCAAAGTGACATTTTGCACTCAAGACCCAACGAAGAGTAGCATCTCCCCTGGCCAGGAGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CAA 72 bp | TCGCCGGATGTACAGCTCCCTCGAGGGGTTGCTGGGTaGAGACAGGTAGTTGCGAAACTCATTCCACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPDVQLPRGVAG*RQVVAKLIPQV Trigger: AACCTGTGGAATGAGTTTCGCAACTACCTGTCTCAACCCAGCAACCCCTCGAGGGAGCTGTACATCCGGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CAA 72 bp | ACCACAGCTCCTGGCCAGGGGAGATGCTACTCTTCGTaGGGTCTTGAGTGCAAAATGTCACTTTGCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TTAPGQGRCYSS*GLECKMSLCAG Trigger: CCCAGCGCAAAGTGACATTTTGCACTCAAGACCCAACGAAGAGTAGCATCTCCCCTGGCCAGGAGCTGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CAA 90 bp | GACACGAATTCGCCGGATGTACAGCTCCCTCGAGGGGTTGCTGGGTaGAGACAGGTAGTTGCGAAACTCATTCCACAGGTTGTACCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: DTNSPDVQLPRGVAG*RQVVAKLIPQVVPG Trigger: TCCTGGTACAACCTGTGGAATGAGTTTCGCAACTACCTGTCTCAACCCAGCAACCCCTCGAGGGAGCTGTACATCCGGCGAATTCGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 72 bp | GCGGATGTTAAAAGCCACAGAGGGTCTGGCGGTAGCTaGTACTCCAGTGGGTTTATGATGCTCATCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ADVKSHRGSGGS*YSSGFMMLISQ Trigger: CTGCGAGATGAGCATCATAAACCCACTGGAGTACCAGCTACCGCCAGACCCTCTGTGGCTTTTAACATCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 72 bp | GAATTCGCCGGATGTACAGCTCCCTCGAGGGGTTGCTaGGTTGAGACAGGTAGTTGCGAAACTCATTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: EFAGCTAPSRGC*VETGSCETHST Trigger: TGTGGAATGAGTTTCGCAACTACCTGTCTCAACCCAGCAACCCCTCGAGGGAGCTGTACATCCGGCGAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CAA 90 bp | ATGTTATTACAACGGTTCTTCCGGCAGCTGAGGCAGATTCCCCTTTaGAAGCGGCTGGAGTCTGTGCACTGGAAGGCAAAGCTGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MLLQRFFRQLRQIPL*KRLESVHWKAKLGL Trigger: CAAGCCCAGCTTTGCCTTCCAGTGCACAGACTCCAGCCGCTTCAAAAGGGGAATCTGCCTCAGCTGCCGGAAGAACCGTTGTAATAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | AGATGTCAATGTGACCCACAGGCATCCGAATCCCAATaGTCAAGCCAAAGGACAGCGTGTAGGTATGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RCQCDPQASESQ*SSQRTACRYAG Trigger: TCCTGCATACCTACACGCTGTCCTTTGGCTTGAGCATTGGGATTCGGATGCCTGTGGGTCACATTGACATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | GACACTTGTGAAACCACAGCTCCTGGCCAGGGGAGATaGTACTCTTCGTTGGGTCTTGAGTGCAAAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: DTCETTAPGQGR*YSSLGLECKMS Trigger: TGACATTTTGCACTCAAGACCCAACGAAGAGTAGCATCTCCCCTGGCCAGGAGCTGTGGTTTCACAAGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 72 bp | GCTGTCACCAAGGGAGAGATTACACCCTTCCTGCTCTaGGTCCTTAGAAGTGCGGATGTTAAAAGCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: AVTKGEITPFLL*VLRSADVKSHR Trigger: TCTGTGGCTTTTAACATCCGCACTTCTAAGGACCCAGAGCAGGAAGGGTGTAATCTCTCCCTTGGTGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | AGTTTGCTGTCACCAAGGGAGAGATTACACCCTTCCTaGTCTGGGTCCTTAGAAGTGCGGATGTTAAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLSPRERLHPS*SGSLEVRMLKA Trigger: GGCTTTTAACATCCGCACTTCTAAGGACCCAGAGCAGGAAGGGTGTAATCTCTCCCTTGGTGACAGCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 72 bp | CACGACGTTAGCATCTTTCTCTCTCATCTGCAGGGCTaGTACAAGTTTATGCAGCCAGCTCTCAAACATGCC | + |
|
Preference number: 6 (lower is better) Translates to: HDVSIFLSHLQG*YKFMQPALKHA Trigger: GGCATGTTTGAGAGCTGGCTGCATAAACTTGTATCAGCCCTGCAGATGAGAGAGAAAGATGCTAACGTCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 72 bp | GTGTACGGCTCGCTCGTGCTCGCATTTCACCATCTCTaGGATTGTTCCATATGCAAAAGATCCGATGACATC | + |
|
Preference number: 6 (lower is better) Translates to: VYGSLVLAFHHL*DCSICKRSDDI Trigger: GATGTCATCGGATCTTTTGCATATGGAACAATCTCAGAGATGGTGAAATGCGAGCACGAGCGAGCCGTACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS GCA 72 bp | TCTTTCTCTCTCATCTGCAGGGCTGATACAAGTTTATaGAGCCAGCTCTCAAACATGCCACTCATCGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SFSLICRADTSL*SQLSNMPLIVH Trigger: ATGGACGATGAGTGGCATGTTTGAGAGCTGGCTGCATAAACTTGTATCAGCCCTGCAGATGAGAGAGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 72 bp | TGCAAAAGATCCGATGACATCATTGAATCCACAGCCTaGCTGGAAGTCACCGCCATTGGGATAGATGTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: CKRSDDIIESTA*LEVTAIGIDVN Trigger: ATTGACATCTATCCCAATGGCGGTGACTTCCAGCCAGGCTGTGGATTCAATGATGTCATCGGATCTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS CCA 72 bp | CCAAGTCCTCCTCAGTGTAGACAAGGAAGGTGTTTGTaGCATTCAGCTCAATCTTCTCCACTATTTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSPPQCRQGRCL*HSAQSSPLFPR Trigger: CCTTGGAAATAGTGGAGAAGATTGAGCTGAATGCCACAAACACCTTCCTTGTCTACACTGAGGAGGACTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||
| CDS TCA 72 bp | AGAACATGTGAACTTTCAGCTGGTAATGGTAAACTTTaGAAGGCATGCCAGCCCGGGTTTTTAAATACATTT | + |
|
Preference number: 6 (lower is better) Translates to: RTCELSAGNGKL*KACQPGFLNTF Trigger: AAATGTATTTAAAAACCCGGGCTGGCATGCCTTTCAAAGTTTACCATTACCAGCTGAAAGTTCACATGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066532.5 |
||