Pregenerated sensors for LIPC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032207Ensembl transcript IDs: ENSMUST00000034731.10, ENSMUST00000214995.2, ENSMUST00000216798.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGCGAACCCTGAGACGTaGGCTCCCAGGCTGTACCCA | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLANPET*APRLYP Trigger: TGGGTACAGCCTGGGAGCGCACGTCTCAGGGTTCGC...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGAAGTGGCAGCCAGGCTaGAAGGAGCCCCCATTGGGG | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEKWQPG*KEPPLG Trigger: CCCCAATGGGGGCTCCTTCCAGCCTGGCTGCCACTT...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAAAGTGGCAGCCAGGCTaGAAGGAGCCCCCATTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLKWQPG*KEPPLG Trigger: CCCCAATGGGGGCTCCTTCCAGCCTGGCTGCCACTT...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGCGGCTGAGAGCTGTTaGAGCCACACTCCTGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEAAESC*SHTPAV Trigger: CACTGCAGGAGTGTGGCTTCAACAGCTCTCAGCCGC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034731.10 |
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| CDS-3UTR TCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAGGGCAATGGGCTGCTTaGTGCCCACACTCAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPGQWAA*CPHSSP Trigger: TGGGCTTGAGTGTGGGCATCAAGCAGCCCATTGCCC...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCACCCATGTCGCTGCACTaGAAGCCGATGCTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPPMSLH*KPMLCR Trigger: CCTGCAGAGCATCGGCTTCCAGTGCAGCGACATGGG...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTCTCCTGGCTCGGGTaGAGCTGGAGGTCATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPFSWLG*SWRSSR Trigger: TCTGGATGACCTCCAGCTTCACCCGAGCCAGGAGAA...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAATGAGGCCAGAGTGGTaGGGTTCTATGCCCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLMRPEW*GSMPHS Trigger: GCTATGGGGCATAGAACCTCACCACTCTGGCCTCAT...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGATGAGGCCAGAGTGGTaGGGTTCTATGCCCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEMRPEW*GSMPHS Trigger: GCTATGGGGCATAGAACCTCACCACTCTGGCCTCAT...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGGTGTAGTGCTGGTATaGCAGGGAGATCCAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLGVVLV*QGDPVH Trigger: GTGGACTGGATCTCCCTGGCATACCAGCACTACACC...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAGGTGTAGTGCTGGTATaGCAGGGAGATCCAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPGVVLV*QGDPVH Trigger: GTGGACTGGATCTCCCTGGCATACCAGCACTACACC...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGGAAGGAGCCCCCATTaGGGTAGAAGTCATAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEGRSPH*GRSHSG Trigger: CCCACTATGACTTCTACCCCAATGGGGGCTCCTTCC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGGAAGGAGCCCCCATTaGGGTAGAAGTCATAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLGRSPH*GRSHSG Trigger: CCCACTATGACTTCTACCCCAATGGGGGCTCCTTCC...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTATGCACGGAGCGCTCATaGGCACATTTGATGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLCTERS*AHLMVW Trigger: CCAGACCATCAAATGTGCCCATGAGCGCTCCGTGCA...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACTCAGGCATAGACCTTaGCTGAAGCTGCCCATGTCG | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLLRHRP*LKLPMS Trigger: CGACATGGGCAGCTTCAGCCAAGGTCTATGCCTGAG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCACTCAGGCATAGACCTTaGCTGAAGCTGCCCATGTCG | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPLRHRP*LKLPMS Trigger: CGACATGGGCAGCTTCAGCCAAGGTCTATGCCTGAG...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGCTCATGGGCACATTTaGTGGTCTGGGTTATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEAHGHI*WSGLWR Trigger: ACGCCATAACCCAGACCATCAAATGTGCCCATGAGC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAGCTCATGGGCACATTTaGTGGTCTGGGTTATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPAHGHI*WSGLWR Trigger: ACGCCATAACCCAGACCATCAAATGTGCCCATGAGC...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACTATGCCCCATAGCATaGTGGTCTGCACTGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLLCPIA*WSALCS Trigger: GGAACACAGTGCAGACCATCATGCTATGGGGCATAG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAGCGTCTCTCCAGCTTTaGCCCAGATGGTCTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPASLQL*PRWSSE Trigger: TTCTGAAGACCATCTGGGTCAAAGCTGGAGAGACGC...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGCGTCTCTCCAGCTTTaGCCCAGATGGTCTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEASLQL*PRWSSE Trigger: TTCTGAAGACCATCTGGGTCAAAGCTGGAGAGACGC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGTGCAACGGCCCTTCTTaGAGCTCAGGCATAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLECNGPS*SSGIDL Trigger: AAGGTCTATGCCTGAGCTGCAAGAAGGGCCGTTGCA...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACATAACCCAGAGTGTTaGAACGGCCCTTCTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLHNPEC*NGPSCS Trigger: GCTGCAAGAAGGGCCGTTGCAACACTCTGGGTTATG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCACATAACCCAGAGTGTTaGAACGGCCCTTCTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPHNPEC*NGPSCS Trigger: GCTGCAAGAAGGGCCGTTGCAACACTCTGGGTTATG...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGGTAATGATAAACTTTaGAGGGAGACTGGGCTCGCG | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEGNDKL*RETGLA Trigger: CGCGAGCCCAGTCTCCCTTCAAAGTTTATCATTACC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTATGCAGGTCACTGTGTTaGAAGGAGTCAATGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLCRSLC*KESMKR Trigger: CCTCTTCATTGACTCCTTGCAACACAGTGACCTGCA...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCACACATTGGCCCACACTaGACTGTTTTCCCACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPHIGPH*TVFPLE Trigger: TTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGTG...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACACATTGGCCCACACTaGACTGTTTTCCCACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLHIGPH*TVFPLE Trigger: TTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGTG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCACTGTGTTCCACACATTaGCCCACACTGCACTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPLCSTH*PTLHCF Trigger: AAAACAGTGCAGTGTGGGCCAATGTGTGGAACACAG...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACTGTACCCAATTAGGTaGACTTTGCTCCGAGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLLYPIR*TLLREN Trigger: GTTTTCTCGGAGCAAAGTTCACCTAATTGGGTACAG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATCCCTGGTAAAGGTATaGATGGCGTCCACAAAATTG | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPSLVKV*MASTKL Trigger: CAATTTTGTGGACGCCATTCATACCTTTACCAGGGA...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGTCCCTGGTAAAGGTATaGATGGCGTCCACAAAATTG | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLESLVKV*MASTKL Trigger: CAATTTTGTGGACGCCATTCATACCTTTACCAGGGA...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR TCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGTTTGCATGGGTCTCTTaGCTCATCTGCTCTTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEFAWVS*LICSFD Trigger: ATCGAAAGAGCAGATGAGTCAAGAGACCCATGCAAA...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACATAGCATGATGGTCTaGACTGTGTTCCACACATTG | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLHSMMV*TVFHTL Trigger: CAATGTGTGGAACACAGTGCAGACCATCATGCTATG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCACATAGCATGATGGTCTaGACTGTGTTCCACACATTG | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPHSMMV*TVFHTL Trigger: CAATGTGTGGAACACAGTGCAGACCATCATGCTATG...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR GCA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAAATGTCATTCTTTGCTaGGTCTCTCCAGCTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPNVILC*VSPALT Trigger: GGTCAAAGCTGGAGAGACGCAGCAAAGAATGACATT...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGGAAGAGCAGGAATCTaGTCTCTGGCTTCTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEGRAGI*SLASLM Trigger: CATTAAAGAAGCCAGAGACCAGATTCCTGCTCTTCC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034731.10 |
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| CDS-3UTR CCA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGAGAACACCAGGAAAATaGAGATTTGGAGGGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: CMIDPLCNFGFQIRQPLERTPGK*RFGGDF Trigger: GAAATCCCCTCCAAATCTCCATTTTCCTGGTGTTCT...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034731.10 |
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| CDS-3UTR CCA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACCACAAGCACTTGATTaGATAAAGATGCAGAACACC | + |
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Preference number: 4 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLPQALD*IKMQNT Trigger: GGTGTTCTGCATCTTTATCCAATCAAGTGCTTGTGG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034731.10 |
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| CDS CCA 90 bp | CCCAGAGTGTTGCAACGGCCCTTCTTGCAGCTCAGGCATAGACCTTaGCTGAAGCTGCCCATGTCGCTGCACTGGAAGCCGATGCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PRVLQRPFLQLRHRP*LKLPMSLHWKPMLC Trigger: GCAGAGCATCGGCTTCCAGTGCAGCGACATGGGCAGCTTCAGCCAAGGTCTATGCCTGAGCTGCAAGAAGGGCCGTTGCAACACTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS GCA 90 bp | CCTTGGCTGAAGCTGCCCATGTCGCTGCACTGGAAGCCGATGCTCTaGAGGTCACTGTGTTGCAAGGAGTCAATGAAGAGGTGCACGGAG | + |
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Preference number: 5 (lower is better) Translates to: PWLKLPMSLHWKPML*RSLCCKESMKRCTE Trigger: CTCCGTGCACCTCTTCATTGACTCCTTGCAACACAGTGACCTGCAGAGCATCGGCTTCCAGTGCAGCGACATGGGCAGCTTCAGCCAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CCA 90 bp | TGGTATGCCAGGGAGATCCAGTCCACTAACCCCACATTCACAGGTTaGGACTGTCGGGACTTCAGCGCACTCACTATCTTCCAGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: WYAREIQSTNPTFTG*DCRDFSALTIFQIQ Trigger: CTGGATCTGGAAGATAGTGAGTGCGCTGAAGTCCCGACAGTCCCAACCTGTGAATGTGGGGTTAGTGGACTGGATCTCCCTGGCATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CCA 90 bp | TCACTGTGTTGCAAGGAGTCAATGAAGAGGTGCACGGAGCGCTCATaGGCACATTTGATGGTCTGGGTTATGGCGTTTAAGCCATGCTCT | + |
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Preference number: 5 (lower is better) Translates to: SLCCKESMKRCTERS*AHLMVWVMAFKPCS Trigger: AGAGCATGGCTTAAACGCCATAACCCAGACCATCAAATGTGCCCATGAGCGCTCCGTGCACCTCTTCATTGACTCCTTGCAACACAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CCA 90 bp | CTCCCAAAGGGCTCTGTTCCCACGCCTTGTCCACAAGCACTTGATTaGATAAAGATGCAGAACACCAGGAAAATGGAGATTTGGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPKGSVPTPCPQALD*IKMQNTRKMEIWRG Trigger: TCCCCTCCAAATCTCCATTTTCCTGGTGTTCTGCATCTTTATCCAATCAAGTGCTTGTGGACAAGGCGTGGGAACAGAGCCCTTTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000214995.2 |
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| CDS TCA 90 bp | ATGGGTCTCTTGACTCATCTGCTCTTTCGATTCAGTCAGTCTTTTTaGCTTCACTTCACAGTTCACAAAGACTTTCTCCTGGCTCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MGLLTHLLFRFSQSF*LHFTVHKDFLLARV Trigger: CACCCGAGCCAGGAGAAAGTCTTTGTGAACTGTGAAGTGAAGTCAAAAAGACTGACTGAATCGAAAGAGCAGATGAGTCAAGAGACCCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAATGAGGAAGAGCCTCTaGCTCTTGCCTGACCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPMRKSL*LLPDRS Trigger: GGACCGGTCAGGCAAGAGCAAGAGGCTCTTCCTCAT...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAATGAGGAAGAGCCTCTaGCTCTTGCCTGACCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLMRKSL*LLPDRS Trigger: GGACCGGTCAGGCAAGAGCAAGAGGCTCTTCCTCAT...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTACGCTCATGGGCACATTaGATGGTCTGGGTTATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLRSWAH*MVWVMA Trigger: CGCCATAACCCAGACCATCAAATGTGCCCATGAGCG...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGTTGCAACGGCCCTTCTaGCAGCTCAGGCATAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: CMIDPLCNFGFQIRQPLELQRPF*QLRHRP Trigger: AGGTCTATGCCTGAGCTGCAAGAAGGGCCGTTGCAA...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCACTGCAGGTCACTGTGTaGCAAGGAGTCAATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPLQVTV*QGVNEE Trigger: CTCTTCATTGACTCCTTGCAACACAGTGACCTGCAG...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTATTTTCCCACTTGAACTaGAGCAGGATCAACTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLFSHLN*SRINSP Trigger: CGGCGAGTTGATCCTGCTCAAGTTCAAGTGGGAAAA...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGTTTTCCCACTTGAACTaGAGCAGGATCAACTCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEFSHLN*SRINSP Trigger: CGGCGAGTTGATCCTGCTCAAGTTCAAGTGGGAAAA...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGACTGTGTTCCACACATaGGCCCACACTGCACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CMIDPLCNFGFQIRQPLETVFHT*AHTALF Trigger: AAACAGTGCAGTGTGGGCCAATGTGTGGAACACAGT...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAACTGTGTTCCACACATaGGCCCACACTGCACTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLTVFHT*AHTALF Trigger: AAACAGTGCAGTGTGGGCCAATGTGTGGAACACAGT...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGCGATCGTTTTCATCTaGGAAGAGCAGGAATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEAIVFI*EEQESG Trigger: ACCAGATTCCTGCTCTTCCAAGATGAAAACGATCGC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034731.10 |
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| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAATGGCGTCCACAAAATaGGCATCATCAGGAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPMASTK*ASSGER Trigger: CCTTTCTCCTGATGATGCCAATTTTGTGGACGCCAT...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGGCACTGTTTTCCCACTaGAACTTGAGCAGGATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEALFSH*NLSRIN Trigger: GTTGATCCTGCTCAAGTTCAAGTGGGAAAACAGTGC...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAGCACTGTTTTCCCACTaGAACTTGAGCAGGATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPALFSH*NLSRIN Trigger: GTTGATCCTGCTCAAGTTCAAGTGGGAAAACAGTGC...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS-3UTR CAA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGCAAAATGTCATTCTTaGCTGCGTCTCTCCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLAKCHS*LRLSSF Trigger: AAAGCTGGAGAGACGCAGCAAAGAATGACATTTTGC...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCAGCAAAATGTCATTCTTaGCTGCGTCTCTCCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPAKCHS*LRLSSF Trigger: AAAGCTGGAGAGACGCAGCAAAGAATGACATTTTGC...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS-3UTR CAA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTATTTTGCATGGGTCTCTaGACTCATCTGCTCTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLFCMGL*THLLFR Trigger: TCGAAAGAGCAGATGAGTCAAGAGACCCATGCAAAA...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTTTGCATGGGTCTCTaGACTCATCTGCTCTTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPFCMGL*THLLFR Trigger: TCGAAAGAGCAGATGAGTCAAGAGACCCATGCAAAA...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATCTTTATTTCTTCTTTaGTTCCCAGCAGCGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPSLFLL*FPAATW Trigger: CCATGTCGCTGCTGGGAACAAAAGAAGAAATAAAGA...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS-3UTR CAA 90 bp | GGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTATACCGGCTTCTCAATTaGATTGATGAACTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCMIDPLCNFGFQIRQPLYRLLN*IDELDL Trigger: AAGATCCAGTTCATCAATCAAATTGAGAAGCCGGTA...TAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS-3UTR CAA 90 bp | AATGGATGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATACCGGCTTCTCAATTaGATTGATGAACTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: NGCMIDPLCNFGFQIRQPYRLLN*IDELDL Trigger: AAGATCCAGTTCATCAATCAAATTGAGAAGCCGGTA...TGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCATCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS-3UTR CAA 90 bp | TGCATGATTGATCCTTTGTGTAATTTTGGCTTCCAAATAAGGCAACCATTAGAGATTCAGTCAGTCTTTTaGACTTCACTTCACAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CMIDPLCNFGFQIRQPLEIQSVF*TSLHSS Trigger: TGAACTGTGAAGTGAAGTCAAAAAGACTGACTGAAT...CTCTAATGGTTGCCTTATTTGGAAGCCAAAATTACACAAAGGATCAATCATGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 72 bp | GGGCCCGCAGGGTCCAGCCCTGTGATTCTTCCAATCTaGTTCTTCCCGTCCATGGAGCTGCCTGCGAACCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPAGSSPVILPI*FFPSMELPANP Trigger: AGGGTTCGCAGGCAGCTCCATGGACGGGAAGAACAAGATTGGAAGAATCACAGGGCTGGACCCTGCGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CCA 72 bp | TTGCAACGGCCCTTCTTGCAGCTCAGGCATAGACCTTaGCTGAAGCTGCCCATGTCGCTGCACTGGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LQRPFLQLRHRP*LKLPMSLHWKP Trigger: CGGCTTCCAGTGCAGCGACATGGGCAGCTTCAGCCAAGGTCTATGCCTGAGCTGCAAGAAGGGCCGTTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CAA 90 bp | TCAAACATAGGGCCCGCAGGGTCCAGCCCTGTGATTCTTCCAATCTaGTTCTTCCCGTCCATGGAGCTGCCTGCGAACCCTGAGACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SNIGPAGSSPVILPI*FFPSMELPANPETC Trigger: GCACGTCTCAGGGTTCGCAGGCAGCTCCATGGACGGGAAGAACAAGATTGGAAGAATCACAGGGCTGGACCCTGCGGGCCCTATGTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS TCA 72 bp | CTGTTGAAGCCACACTCCTGCAGTGTTTCCGGGTGCTaGGGTCTGAGACGACAGCCCAGGCGATCGTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLKPHSCSVSGC*GLRRQPRRSFS Trigger: TGAAAACGATCGCCTGGGCTGTCGTCTCAGACCTCAGCACCCGGAAACACTGCAGGAGTGTGGCTTCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000214995.2 |
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| CDS GCA 72 bp | CTGCACTGGAAGCCGATGCTCTGCAGGTCACTGTGTTaGAAGGAGTCAATGAAGAGGTGCACGGAGCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LHWKPMLCRSLC*KESMKRCTERS Trigger: TGAGCGCTCCGTGCACCTCTTCATTGACTCCTTGCAACACAGTGACCTGCAGAGCATCGGCTTCCAGTGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CCA 72 bp | CATAGACCTTGGCTGAAGCTGCCCATGTCGCTGCACTaGAAGCCGATGCTCTGCAGGTCACTGTGTTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HRPWLKLPMSLH*KPMLCRSLCCK Trigger: CTTGCAACACAGTGACCTGCAGAGCATCGGCTTCCAGTGCAGCGACATGGGCAGCTTCAGCCAAGGTCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS GCA 72 bp | CTGACCGGTCCTTGCGGATGTCATAACCCAGAGTGTTaGAACGGCCCTTCTTGCAGCTCAGGCATAGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LTGPCGCHNPEC*NGPSCSSGIDL Trigger: AAGGTCTATGCCTGAGCTGCAAGAAGGGCCGTTGCAACACTCTGGGTTATGACATCCGCAAGGACCGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS GCA 72 bp | TGCAGGTCACTGTGTTGCAAGGAGTCAATGAAGAGGTaGACGGAGCGCTCATGGGCACATTTGATGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRSLCCKESMKR*TERSWAHLMVW Trigger: CCAGACCATCAAATGTGCCCATGAGCGCTCCGTGCACCTCTTCATTGACTCCTTGCAACACAGTGACCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CCA 72 bp | AGGGAGATCCAGTCCACTAACCCCACATTCACAGGTTaGGACTGTCGGGACTTCAGCGCACTCACTATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: REIQSTNPTFTG*DCRDFSALTIF Trigger: GAAGATAGTGAGTGCGCTGAAGTCCCGACAGTCCCAACCTGTGAATGTGGGGTTAGTGGACTGGATCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CAA 72 bp | AAGAGCAGCCACGTCCTGGCCCACAATACGGGTGTTTaGAACAGCAATGGTGTAGTGCTGGTATGCCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KSSHVLAHNTGV*NSNGVVLVCQG Trigger: TCCCTGGCATACCAGCACTACACCATTGCTGTTCAAAACACCCGTATTGTGGGCCAGGACGTGGCTGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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| CDS CAA 90 bp | TGCACTGTGTTCCACACATTGGCCCACACTGCACTGTTTTCCCACTaGAACTTGAGCAGGATCAACTCGCCGATGTCTTTGTCCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CTVFHTLAHTALFSH*NLSRINSPMSLSSV Trigger: CACACTGGACAAAGACATCGGCGAGTTGATCCTGCTCAAGTTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGTGTGGAACACAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 90 bp | GGTTCTATGCCCCATAGCATGATGGTCTGCACTGTGTTCCACACATaGGCCCACACTGCACTGTTTTCCCACTTGAACTTGAGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: GSMPHSMMVCTVFHT*AHTALFSHLNLSRI Trigger: GATCCTGCTCAAGTTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGTGTGGAACACAGTGCAGACCATCATGCTATGGGGCATAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS TCA 72 bp | TTGACCCAGATGGTCTTCAGAATGAGGCCAGAGTGGTaGGGTTCTATGCCCCATAGCATGATGGTCTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: LTQMVFRMRPEW*GSMPHSMMVCT Trigger: AGTGCAGACCATCATGCTATGGGGCATAGAACCTCACCACTCTGGCCTCATTCTGAAGACCATCTGGGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CCA 72 bp | TGCAAGGAGTCAATGAAGAGGTGCACGGAGCGCTCATaGGCACATTTGATGGTCTGGGTTATGGCGTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: CKESMKRCTERS*AHLMVWVMAFK Trigger: CTTAAACGCCATAACCCAGACCATCAAATGTGCCCATGAGCGCTCCGTGCACCTCTTCATTGACTCCTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 72 bp | CCCCATAGCATGATGGTCTGCACTGTGTTCCACACATaGGCCCACACTGCACTGTTTTCCCACTTGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PHSMMVCTVFHT*AHTALFSHLNL Trigger: CAAGTTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGTGTGGAACACAGTGCAGACCATCATGCTATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 90 bp | GTGTTCCACACATTGGCCCACACTGCACTGTTTTCCCACTTGAACTaGAGCAGGATCAACTCGCCGATGTCTTTGTCCAGTGTGATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: VFHTLAHTALFSHLN*SRINSPMSLSSVIR Trigger: CCTTATCACACTGGACAAAGACATCGGCGAGTTGATCCTGCTCAAGTTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGTGTGGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 72 bp | ACATTGGCCCACACTGCACTGTTTTCCCACTTGAACTaGAGCAGGATCAACTCGCCGATGTCTTTGTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TLAHTALFSHLN*SRINSPMSLSS Trigger: ACTGGACAAAGACATCGGCGAGTTGATCCTGCTCAAGTTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 72 bp | TTCCACACATTGGCCCACACTGCACTGTTTTCCCACTaGAACTTGAGCAGGATCAACTCGCCGATGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FHTLAHTALFSH*NLSRINSPMSL Trigger: CAAAGACATCGGCGAGTTGATCCTGCTCAAGTTCAAGTGGGAAAACAGTGCAGTGTGGGCCAATGTGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 72 bp | AAGAGCAGGAATCTGGTCTCTGGCTTCTTTAATGGCTaGCTAGCTTCAGTAGCTCCAAGGCTTCTCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSRNLVSGFFNG*LASVAPRLLPK Trigger: CTTTGGGAGAAGCCTTGGAGCTACTGAAGCTAGCAAGCCATTAAAGAAGCCAGAGACCAGATTCCTGCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000214995.2 |
||
| CDS CCA 72 bp | GGCTCTGTTCCCACGCCTTGTCCACAAGCACTTGATTaGATAAAGATGCAGAACACCAGGAAAATGGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: GSVPTPCPQALD*IKMQNTRKMEI Trigger: AATCTCCATTTTCCTGGTGTTCTGCATCTTTATCCAATCAAGTGCTTGTGGACAAGGCGTGGGAACAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000214995.2 |
||
| CDS CAA 90 bp | TCCCAGCAGCGACATGGTAAAAGTAGGCTCTACCGGCTTCTCAATTaGATTGATGAACTGGATCTTGAACTGGTAATGATAAACTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQQRHGKSRLYRLLN*IDELDLELVMINFE Trigger: TTCAAAGTTTATCATTACCAGTTCAAGATCCAGTTCATCAATCAAATTGAGAAGCCGGTAGAGCCTACTTTTACCATGTCGCTGCTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS TCA 72 bp | TTGACTCATCTGCTCTTTCGATTCAGTCAGTCTTTTTaGCTTCACTTCACAGTTCACAAAGACTTTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTHLLFRFSQSF*LHFTVHKDFLL Trigger: CAGGAGAAAGTCTTTGTGAACTGTGAAGTGAAGTCAAAAAGACTGACTGAATCGAAAGAGCAGATGAGTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
||
| CDS CAA 72 bp | CGACATGGTAAAAGTAGGCTCTACCGGCTTCTCAATTaGATTGATGAACTGGATCTTGAACTGGTAATGATA | + |
|
Preference number: 6 (lower is better) Translates to: RHGKSRLYRLLN*IDELDLELVMI Trigger: TATCATTACCAGTTCAAGATCCAGTTCATCAATCAAATTGAGAAGCCGGTAGAGCCTACTTTTACCATGTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034731.10 ENSMUST00000216798.2 |
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